Opened 9 years ago
Closed 9 years ago
#236 closed task (fixed)
Duchamp installation problems (cpgplot problems?)
Reported by: | Owned by: | MatthewWhiting | |
---|---|---|---|
Priority: | normal | Milestone: | |
Component: | Building/Installation | Version: | 1.6.1 |
Severity: | normal | Keywords: | |
Cc: |
Description (last modified by )
I've been struggling to install Duchamp for a few days and I'm at the asking-for-help stage!
Duchamp: 1.6.6 System: Ubuntu 14.04.3 LTS pgplot: 5.2
end section of the "make" log:
g++ -o Duchamp-1.6.1 ./src/mainDuchamp.o ./src/duchamp.o ./src/param.o ./src/fitsHeader.o ./src/PixelMap/Line.o ./src/PixelMap/Voxel.o ./src/PixelMap/Scan.o ./src/PixelMap/Object2D.o ./src/PixelMap/Object3D.o ./src/ATrous/filter.o ./src/ATrous/B3SplineFilter.o ./src/ATrous/TriangleFilter.o ./src/ATrous/HaarFilter.o ./src/ATrous/FilterFactory.o ./src/ATrous/atrous_1d_reconstruct.o ./src/ATrous/atrous_2d_reconstruct.o ./src/ATrous/atrous_3d_reconstruct.o ./src/ATrous/baselineSubtract.o ./src/ATrous/ReconSearch.o ./src/Detection/detection.o ./src/Detection/ObjectGrower.o ./src/Detection/areClose.o ./src/Detection/lutz_detect.o ./src/Detection/mergeIntoList.o ./src/Detection/outputDetection.o ./src/Detection/sorting.o ./src/Detection/spectrumDetect.o ./src/Cubes/cubes.o ./src/Cubes/cubes_extended.o ./src/Cubes/baseline.o ./src/Cubes/CubicSearch.o ./src/Cubes/detectionIO.o ./src/Cubes/existingDetections.o ./src/Cubes/getImage.o ./src/Cubes/invertCube.o ./src/Cubes/Merger.o ./src/Cubes/momentMap.o ./src/Cubes/smoothCube.o ./src/Cubes/spectraUtils.o ./src/Cubes/trimImage.o ./src/FitsIO/Beam.o ./src/FitsIO/DuchampBeam.o ./src/FitsIO/ReadExisting.o ./src/FitsIO/ReadExistingRecon.o ./src/FitsIO/ReadExistingSmooth.o ./src/FitsIO/WriteArray.o ./src/FitsIO/WriteBaselineArray.o ./src/FitsIO/WriteMaskArray.o ./src/FitsIO/WriteMomentMapArray.o ./src/FitsIO/WriteMomentMaskArray.o ./src/FitsIO/WriteReconArray.o ./src/FitsIO/WriteSmoothArray.o ./src/FitsIO/dataIO.o ./src/FitsIO/headerIO.o ./src/FitsIO/subsection.o ./src/FitsIO/wcsIO.o ./src/Utils/Section.o ./src/Utils/Statistics.o ./src/Utils/feedback.o ./src/Utils/GaussSmooth1D.o ./src/Utils/Hanning.o ./src/Utils/VOField.o ./src/Utils/VOParam.o ./src/Utils/getStats.o ./src/Utils/getNormalStats.o ./src/Utils/getRobustStats.o ./src/Utils/linear_regression.o ./src/Utils/medianBaseline.o ./src/Utils/position_related.o ./src/Utils/sort.o ./src/Utils/string_related.o ./src/Utils/wcsFunctions.o ./src/Utils/zscale.o ./src/Outputs/columns.o ./src/Outputs/CatalogueSpecification.o ./src/Outputs/CatalogueWriter.o ./src/Outputs/FileCatalogueWriter.o ./src/Outputs/ASCIICatalogueWriter.o ./src/Outputs/VOTableCatalogueWriter.o ./src/Outputs/AnnotationWriter.o ./src/Outputs/KarmaAnnotationWriter.o ./src/Outputs/DS9AnnotationWriter.o ./src/Outputs/CasaAnnotationWriter.o ./src/Cubes/drawBlankEdges.o ./src/Cubes/drawMomentCutout.o ./src/Cubes/outputSpectra.o ./src/Cubes/plotting.o ./src/Detection/drawBorders.o ./src/Plotting/DuchampPlot.o ./src/Plotting/MultipleDuchampPlot.o ./src/Plotting/ImagePlot.o ./src/Plotting/SpectralPlot.o ./src/Plotting/SimpleSpectralPlot.o ./src/Plotting/CutoutPlot.o ./src/Utils/mycpgplot.o ./src/Utils/PlottingUtilities.o ./src/Utils/pgplot_related.o -L/usr/local/lib -lwcs -L/usr/local/lib -lcfitsio -L/usr/local/lib -lgfortran -lz -lpng -lstdc++ -lm ./src/Cubes/drawBlankEdges.o: In function `duchamp::drawBlankEdges(float*, unsigned long, unsigned long, duchamp::Param&)': drawBlankEdges.cc:(.text+0x43b): undefined reference to `cpgqci' drawBlankEdges.cc:(.text+0x445): undefined reference to `cpgsci' drawBlankEdges.cc:(.text+0x45e): undefined reference to `cpgqwin' drawBlankEdges.cc:(.text+0x54d): undefined reference to `cpgmove' drawBlankEdges.cc:(.text+0x56e): undefined reference to `cpgdraw' drawBlankEdges.cc:(.text+0x678): undefined reference to `cpgmove' drawBlankEdges.cc:(.text+0x699): undefined reference to `cpgdraw' drawBlankEdges.cc:(.text+0x6c5): undefined reference to `cpgsci' ./src/Cubes/drawMomentCutout.o: In function `duchamp::Cube::drawFieldEdge()': drawMomentCutout.cc:(.text+0x3f6): undefined reference to `cpgqci' drawMomentCutout.cc:(.text+0x400): undefined reference to `cpgsci' drawMomentCutout.cc:(.text+0x410): undefined reference to `cpgmove' drawMomentCutout.cc:(.text+0x443): undefined reference to `cpgdraw' drawMomentCutout.cc:(.text+0x48f): undefined reference to `cpgdraw' drawMomentCutout.cc:(.text+0x4c1): undefined reference to `cpgdraw' drawMomentCutout.cc:(.text+0x4d1): undefined reference to `cpgdraw' drawMomentCutout.cc:(.text+0x4da): undefined reference to `cpgsci' ./src/Cubes/drawMomentCutout.o: In function `duchamp::Cube::drawScale(float, float, float)': drawMomentCutout.cc:(.text+0x927): undefined reference to `cpgqwin' drawMomentCutout.cc:(.text+0xe97): undefined reference to `cpgqci' drawMomentCutout.cc:(.text+0xea1): undefined reference to `cpgsci' drawMomentCutout.cc:(.text+0xeae): undefined reference to `cpgqlw' drawMomentCutout.cc:(.text+0xeb8): undefined reference to `cpgslw' drawMomentCutout.cc:(.text+0xee2): undefined reference to `cpgerrx' drawMomentCutout.cc:(.text+0xeee): undefined reference to `cpgslw' drawMomentCutout.cc:(.text+0x1113): undefined reference to `cpgqch' drawMomentCutout.cc:(.text+0x1120): undefined reference to `cpgsch' drawMomentCutout.cc:(.text+0x113a): undefined reference to `cpgqcs' drawMomentCutout.cc:(.text+0x11fd): undefined reference to `cpgptxt' drawMomentCutout.cc:(.text+0x1220): undefined reference to `cpgsch' drawMomentCutout.cc:(.text+0x122c): undefined reference to `cpgsci' ./src/Cubes/drawMomentCutout.o: In function `duchamp::Cube::drawMomentCutout(duchamp::Detection&)': drawMomentCutout.cc:(.text+0x1f8f): undefined reference to `cpgswin' drawMomentCutout.cc:(.text+0x1fca): undefined reference to `cpggray' drawMomentCutout.cc:(.text+0x1fe3): undefined reference to `cpgbox' drawMomentCutout.cc:(.text+0x1ffd): undefined reference to `cpgqci' drawMomentCutout.cc:(.text+0x2027): undefined reference to `cpgsci' drawMomentCutout.cc:(.text+0x21a5): undefined reference to `cpgsci' drawMomentCutout.cc:(.text+0x2211): undefined reference to `cpgsci' drawMomentCutout.cc:(.text+0x221b): undefined reference to `cpgsfs' drawMomentCutout.cc:(.text+0x2292): undefined reference to `cpgsci' drawMomentCutout.cc:(.text+0x233c): undefined reference to `cpgrect' ./src/Cubes/outputSpectra.o: In function `duchamp::Cube::plotSpectrum(int, duchamp::Plot::SpectralPlot&)': outputSpectra.cc:(.text+0x1380): undefined reference to `cpgline' outputSpectra.cc:(.text+0x13a0): undefined reference to `cpgsci' outputSpectra.cc:(.text+0x13b0): undefined reference to `cpgline' outputSpectra.cc:(.text+0x13ba): undefined reference to `cpgsci' outputSpectra.cc:(.text+0x1629): undefined reference to `cpgline' outputSpectra.cc:(.text+0x1649): undefined reference to `cpgsci' outputSpectra.cc:(.text+0x1659): undefined reference to `cpgline' outputSpectra.cc:(.text+0x1663): undefined reference to `cpgsci' outputSpectra.cc:(.text+0x1c96): undefined reference to `cpgsci' outputSpectra.cc:(.text+0x1ca6): undefined reference to `cpgline' outputSpectra.cc:(.text+0x1cb0): undefined reference to `cpgsci' outputSpectra.cc:(.text+0x1cc6): undefined reference to `cpgsci' outputSpectra.cc:(.text+0x1cd6): undefined reference to `cpgline' outputSpectra.cc:(.text+0x1ce0): undefined reference to `cpgsci' ./src/Cubes/outputSpectra.o: In function `duchamp::Cube::outputSpectra()': outputSpectra.cc:(.text+0x392c): undefined reference to `cpgclos' outputSpectra.cc:(.text+0x3cf7): undefined reference to `cpgclos' outputSpectra.cc:(.text+0x3e4e): undefined reference to `cpgclos' outputSpectra.cc:(.text+0x405b): undefined reference to `cpgclos' ./src/Cubes/plotting.o: In function `duchamp::Cube::plotMomentMap(std::vector<std::string, std::allocator<std::string> >)': plotting.cc:(.text+0xfb2): undefined reference to `cpgptxt' plotting.cc:(.text+0x115d): undefined reference to `cpggray' plotting.cc:(.text+0x1176): undefined reference to `cpgbox' plotting.cc:(.text+0x1183): undefined reference to `cpgsch' plotting.cc:(.text+0x12df): undefined reference to `cpgsch' plotting.cc:(.text+0x12e9): undefined reference to `cpgslw' plotting.cc:(.text+0x131b): undefined reference to `cpgsci' plotting.cc:(.text+0x13b0): undefined reference to `cpgsci' plotting.cc:(.text+0x15d3): undefined reference to `cpgslw' plotting.cc:(.text+0x16e3): undefined reference to `cpgptxt' plotting.cc:(.text+0x1787): undefined reference to `cpgpt1' ./src/Cubes/plotting.o: In function `duchamp::Cube::plotDetectionMap(std::string)': plotting.cc:(.text+0x2ffd): undefined reference to `cpggray' plotting.cc:(.text+0x3016): undefined reference to `cpgbox' plotting.cc:(.text+0x3023): undefined reference to `cpgsch' plotting.cc:(.text+0x304f): undefined reference to `cpgwedg' plotting.cc:(.text+0x30b0): undefined reference to `cpgsch' plotting.cc:(.text+0x30ba): undefined reference to `cpgslw' plotting.cc:(.text+0x30e9): undefined reference to `cpgsci' plotting.cc:(.text+0x3178): undefined reference to `cpgsci' plotting.cc:(.text+0x3378): undefined reference to `cpgslw' plotting.cc:(.text+0x347b): undefined reference to `cpgptxt' plotting.cc:(.text+0x351f): undefined reference to `cpgpt1' plotting.cc:(.text+0x3bb5): undefined reference to `cpgline' plotting.cc:(.text+0x3bd5): undefined reference to `cpgsci' plotting.cc:(.text+0x3be8): undefined reference to `cpgline' plotting.cc:(.text+0x3bf2): undefined reference to `cpgsci' plotting.cc:(.text+0x4628): undefined reference to `cpgsci' plotting.cc:(.text+0x463b): undefined reference to `cpgline' plotting.cc:(.text+0x4645): undefined reference to `cpgsci' ./src/Detection/drawBorders.o: In function `duchamp::Detection::drawBorders(int, int)': drawBorders.cc:(.text+0x41f): undefined reference to `cpgqwin' drawBorders.cc:(.text+0x452): undefined reference to `cpgswin' drawBorders.cc:(.text+0x4cd): undefined reference to `cpgmove' drawBorders.cc:(.text+0x521): undefined reference to `cpgdraw' drawBorders.cc:(.text+0x585): undefined reference to `cpgswin' ./src/Plotting/DuchampPlot.o: In function `duchamp::Plot::DuchampPlot::open(std::string)': DuchampPlot.cc:(.text+0xb2): undefined reference to `cpgpap' ./src/Plotting/DuchampPlot.o: In function `duchamp::Plot::DuchampPlot::close()': DuchampPlot.cc:(.text+0x121): undefined reference to `cpgclos' ./src/Plotting/DuchampPlot.o: In function `duchamp::Plot::DuchampPlot::goToPlot()': DuchampPlot.cc:(.text+0x134): undefined reference to `cpgslct' ./src/Plotting/MultipleDuchampPlot.o: In function `duchamp::Plot::MultipleDuchampPlot::gotoHeader()': MultipleDuchampPlot.cc:(.text+0x12): undefined reference to `cpgpage' MultipleDuchampPlot.cc:(.text+0x3c): undefined reference to `cpgvsiz' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::firstHeaderLine(std::string)': SpectralPlot.cc:(.text+0x9d): undefined reference to `cpgsch' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::secondHeaderLine(std::string)': SpectralPlot.cc:(.text+0xdd): undefined reference to `cpgsch' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::thirdHeaderLine(std::string)': SpectralPlot.cc:(.text+0x11d): undefined reference to `cpgsch' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::fourthHeaderLine(std::string)': SpectralPlot.cc:(.text+0x15d): undefined reference to `cpgsch' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::gotoHeader(std::string)': SpectralPlot.cc:(.text+0x392): undefined reference to `cpgsch' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::gotoMainSpectrum(float, float, float, float, std::string)': SpectralPlot.cc:(.text+0x3f4): undefined reference to `cpgvsiz' SpectralPlot.cc:(.text+0x401): undefined reference to `cpgsch' SpectralPlot.cc:(.text+0x429): undefined reference to `cpgswin' SpectralPlot.cc:(.text+0x446): undefined reference to `cpgbox' SpectralPlot.cc:(.text+0x453): undefined reference to `cpgsch' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::gotoMap()': SpectralPlot.cc:(.text+0x499): undefined reference to `cpgvsiz' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::drawVelRange(float, float)': SpectralPlot.cc:(.text+0x4d3): undefined reference to `cpgqwin' SpectralPlot.cc:(.text+0x4dd): undefined reference to `cpgqci' SpectralPlot.cc:(.text+0x4e7): undefined reference to `cpgqls' SpectralPlot.cc:(.text+0x4f1): undefined reference to `cpgsci' SpectralPlot.cc:(.text+0x4fb): undefined reference to `cpgsls' SpectralPlot.cc:(.text+0x50c): undefined reference to `cpgmove' SpectralPlot.cc:(.text+0x51d): undefined reference to `cpgdraw' SpectralPlot.cc:(.text+0x52e): undefined reference to `cpgmove' SpectralPlot.cc:(.text+0x53f): undefined reference to `cpgdraw' SpectralPlot.cc:(.text+0x548): undefined reference to `cpgsci' SpectralPlot.cc:(.text+0x551): undefined reference to `cpgsls' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::drawFlaggedChannelRange(float, float)': SpectralPlot.cc:(.text+0x583): undefined reference to `cpgqwin' SpectralPlot.cc:(.text+0x5e1): undefined reference to `cpgqci' SpectralPlot.cc:(.text+0x5eb): undefined reference to `cpgqfs' SpectralPlot.cc:(.text+0x5fa): undefined reference to `cpgsci' SpectralPlot.cc:(.text+0x604): undefined reference to `cpgsfs' SpectralPlot.cc:(.text+0x621): undefined reference to `cpgrect' SpectralPlot.cc:(.text+0x62b): undefined reference to `cpgsfs' SpectralPlot.cc:(.text+0x648): undefined reference to `cpgrect' SpectralPlot.cc:(.text+0x651): undefined reference to `cpgsci' SpectralPlot.cc:(.text+0x65a): undefined reference to `cpgsfs' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::drawThresholds(duchamp::Param&, Statistics::StatsContainer<float>&)': SpectralPlot.cc:(.text+0x682): undefined reference to `cpgqci' SpectralPlot.cc:(.text+0x68c): undefined reference to `cpgqls' SpectralPlot.cc:(.text+0x6a3): undefined reference to `cpgqwin' SpectralPlot.cc:(.text+0x6ad): undefined reference to `cpgsci' SpectralPlot.cc:(.text+0x6b7): undefined reference to `cpgsls' SpectralPlot.cc:(.text+0x6e4): undefined reference to `cpgmove' SpectralPlot.cc:(.text+0x6f8): undefined reference to `cpgdraw' SpectralPlot.cc:(.text+0x742): undefined reference to `cpgsls' SpectralPlot.cc:(.text+0x753): undefined reference to `cpgmove' SpectralPlot.cc:(.text+0x764): undefined reference to `cpgdraw' SpectralPlot.cc:(.text+0x76d): undefined reference to `cpgsci' SpectralPlot.cc:(.text+0x776): undefined reference to `cpgsls' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::drawThresholds(duchamp::Param&, Statistics::StatsContainer<float>&, float*, float*, unsigned long)': SpectralPlot.cc:(.text+0x7d3): undefined reference to `cpgqci' SpectralPlot.cc:(.text+0x7dd): undefined reference to `cpgqls' SpectralPlot.cc:(.text+0x7e7): undefined reference to `cpgsci' SpectralPlot.cc:(.text+0x7f1): undefined reference to `cpgsls' SpectralPlot.cc:(.text+0x8de): undefined reference to `cpgline' SpectralPlot.cc:(.text+0xa7b): undefined reference to `cpgsls' SpectralPlot.cc:(.text+0xa89): undefined reference to `cpgline' SpectralPlot.cc:(.text+0xb2c): undefined reference to `cpgsci' SpectralPlot.cc:(.text+0xb35): undefined reference to `cpgsls' SpectralPlot.cc:(.text+0xb92): undefined reference to `cpgline' SpectralPlot.cc:(.text+0xc04): undefined reference to `cpgsls' SpectralPlot.cc:(.text+0xc12): undefined reference to `cpgline' SpectralPlot.cc:(.text+0xc31): undefined reference to `cpgline' SpectralPlot.cc:(.text+0xc46): undefined reference to `cpgsls' SpectralPlot.cc:(.text+0xc54): undefined reference to `cpgline' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::gotoZoomSpectrum(float, float, float, float)': SpectralPlot.cc:(.text+0xcc6): undefined reference to `cpgvsiz' SpectralPlot.cc:(.text+0xcd3): undefined reference to `cpgsch' SpectralPlot.cc:(.text+0xcf0): undefined reference to `cpgswin' SpectralPlot.cc:(.text+0xd0d): undefined reference to `cpgbox' SpectralPlot.cc:(.text+0x1057): undefined reference to `cpgaxis' SpectralPlot.cc:(.text+0x109a): undefined reference to `cpgtick' SpectralPlot.cc:(.text+0x1248): undefined reference to `cpgtick' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::firstHeaderLine(std::string)': SpectralPlot.cc:(.text+0xc0): undefined reference to `cpgmtxt' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::secondHeaderLine(std::string)': SpectralPlot.cc:(.text+0x100): undefined reference to `cpgmtxt' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::thirdHeaderLine(std::string)': SpectralPlot.cc:(.text+0x140): undefined reference to `cpgmtxt' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::fourthHeaderLine(std::string)': SpectralPlot.cc:(.text+0x180): undefined reference to `cpgmtxt' ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::gotoHeader(std::string)': SpectralPlot.cc:(.text+0x3b5): undefined reference to `cpgmtxt' ./src/Plotting/SpectralPlot.o:SpectralPlot.cc:(.text+0x47a): more undefined references to `cpgmtxt' follow ./src/Plotting/SpectralPlot.o: In function `duchamp::Plot::SpectralPlot::gotoMap()': SpectralPlot.cc:(.text+0x4aa): undefined reference to `cpgsch' ./src/Plotting/SimpleSpectralPlot.o: In function `duchamp::Plot::SimpleSpectralPlot::label(std::string, std::string, std::string)': SimpleSpectralPlot.cc:(.text+0x302): undefined reference to `cpgvsiz' SimpleSpectralPlot.cc:(.text+0x30f): undefined reference to `cpgsch' SimpleSpectralPlot.cc:(.text+0x332): undefined reference to `cpgmtxt' SimpleSpectralPlot.cc:(.text+0x354): undefined reference to `cpgmtxt' ./src/Plotting/SimpleSpectralPlot.o: In function `duchamp::Plot::SimpleSpectralPlot::gotoMainSpectrum(float, float, float, float)': SimpleSpectralPlot.cc:(.text+0x3b0): undefined reference to `cpgvsiz' SimpleSpectralPlot.cc:(.text+0x3bd): undefined reference to `cpgsch' SimpleSpectralPlot.cc:(.text+0x3e5): undefined reference to `cpgswin' ./src/Plotting/SimpleSpectralPlot.o: In function `duchamp::Plot::SimpleSpectralPlot::markDetectedPixels(short*, unsigned long, duchamp::FitsHeader&)': SimpleSpectralPlot.cc:(.text+0x57f): undefined reference to `cpgqwin' SimpleSpectralPlot.cc:(.text+0x5e0): undefined reference to `cpgqlw' SimpleSpectralPlot.cc:(.text+0x5e8): undefined reference to `cpgqfs' SimpleSpectralPlot.cc:(.text+0x5f2): undefined reference to `cpgslw' SimpleSpectralPlot.cc:(.text+0x5fc): undefined reference to `cpgsfs' SimpleSpectralPlot.cc:(.text+0x618): undefined reference to `cpgrect' SimpleSpectralPlot.cc:(.text+0x621): undefined reference to `cpgslw' SimpleSpectralPlot.cc:(.text+0x62a): undefined reference to `cpgsfs' ./src/Plotting/SimpleSpectralPlot.o: In function `duchamp::Plot::SimpleSpectralPlot::label(std::string, std::string, std::string)': SimpleSpectralPlot.cc:(.text+0x37b): undefined reference to `cpgmtxt' ./src/Plotting/SimpleSpectralPlot.o: In function `duchamp::Plot::SimpleSpectralPlot::gotoMainSpectrum(float, float, float, float)': SimpleSpectralPlot.cc:(.text+0x406): undefined reference to `cpgbox' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::firstHeaderLine(std::string)': CutoutPlot.cc:(.text+0x7d): undefined reference to `cpgsch' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::secondHeaderLine(std::string)': CutoutPlot.cc:(.text+0xad): undefined reference to `cpgsch' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::thirdHeaderLine(std::string)': CutoutPlot.cc:(.text+0xdd): undefined reference to `cpgsch' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::fourthHeaderLine(std::string)': CutoutPlot.cc:(.text+0x10d): undefined reference to `cpgsch' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::gotoMap()': CutoutPlot.cc:(.text+0x259): undefined reference to `cpgvsiz' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::firstHeaderLine(std::string)': CutoutPlot.cc:(.text+0x9c): undefined reference to `cpgptxt' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::secondHeaderLine(std::string)': CutoutPlot.cc:(.text+0xcc): undefined reference to `cpgptxt' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::thirdHeaderLine(std::string)': CutoutPlot.cc:(.text+0xfc): undefined reference to `cpgptxt' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::fourthHeaderLine(std::string)': CutoutPlot.cc:(.text+0x12c): undefined reference to `cpgptxt' ./src/Plotting/CutoutPlot.o: In function `duchamp::Plot::CutoutPlot::gotoMap()': CutoutPlot.cc:(.text+0x26a): undefined reference to `cpgsch' ./src/Utils/mycpgplot.o: In function `mycpgplot::cpgIsPS()': mycpgplot.cc:(.text+0x2b): undefined reference to `cpgqinf' ./src/Utils/mycpgplot.o: In function `mycpgplot::mycpgopen(std::string)': mycpgplot.cc:(.text+0xc8): undefined reference to `cpgopen' ./src/Utils/mycpgplot.o: In function `mycpgplot::setDarkGreen()': mycpgplot.cc:(.text+0x94): undefined reference to `cpgscr' ./src/Utils/mycpgplot.o: In function `mycpgplot::setWCSGreen()': mycpgplot.cc:(.text+0xb9): undefined reference to `cpgscr' ./src/Utils/mycpgplot.o: In function `mycpgplot::setWhite()': mycpgplot.cc:(.text+0x107): undefined reference to `cpgsci' mycpgplot.cc:(.text+0x117): undefined reference to `cpgsci' ./src/Utils/mycpgplot.o: In function `mycpgplot::setBlack()': mycpgplot.cc:(.text+0x134): undefined reference to `cpgsci' mycpgplot.cc:(.text+0x14a): undefined reference to `cpgsci' ./src/Utils/PlottingUtilities.o: In function `wcsAxes(wcsprm*, unsigned long*, int, int)': PlottingUtilities.cc:(.text+0x17e): undefined reference to `cpgqlw' PlottingUtilities.cc:(.text+0x18b): undefined reference to `cpgqci' PlottingUtilities.cc:(.text+0x198): undefined reference to `cpgqch' PlottingUtilities.cc:(.text+0x1a0): undefined reference to `cpgsci' PlottingUtilities.cc:(.text+0x1ad): undefined reference to `cpgsch' PlottingUtilities.cc:(.text+0x277): undefined reference to `pgwcsl_' PlottingUtilities.cc:(.text+0x2fb): undefined reference to `cpgsbox' PlottingUtilities.cc:(.text+0x307): undefined reference to `cpgsci' PlottingUtilities.cc:(.text+0x315): undefined reference to `cpgsch' PlottingUtilities.cc:(.text+0x321): undefined reference to `cpgslw' ./src/Plotting/ImagePlot.o: In function `duchamp::Plot::ImagePlot::makeTitle(std::string)': ImagePlot.cc:(.text+0xf5): undefined reference to `cpgvstd' ./src/Plotting/ImagePlot.o: In function `duchamp::Plot::ImagePlot::drawMapBox(float, float, float, float, std::string, std::string)': ImagePlot.cc:(.text+0x26d): undefined reference to `cpgvsiz' ImagePlot.cc:(.text+0x277): undefined reference to `cpgslw' ImagePlot.cc:(.text+0x2a2): undefined reference to `cpgswin' ImagePlot.cc:(.text+0x2bb): undefined reference to `cpgbox' ImagePlot.cc:(.text+0x2c5): undefined reference to `cpgslw' ImagePlot.cc:(.text+0x2de): undefined reference to `cpgbox' ./src/Plotting/ImagePlot.o: In function `duchamp::Plot::ImagePlot::makeTitle(std::string)': ImagePlot.cc:(.text+0x118): undefined reference to `cpgmtxt' ./src/Plotting/ImagePlot.o: In function `duchamp::Plot::ImagePlot::drawMapBox(float, float, float, float, std::string, std::string)': ImagePlot.cc:(.text+0x2fa): undefined reference to `cpglab' ./src/Utils/pgplot_related.o: In function `cpgtest': pgplot_related.c:(.text+0x2f): undefined reference to `cpgqinf' ./src/Utils/pgplot_related.o: In function `cpgwedglog': pgplot_related.c:(.text+0x168): undefined reference to `cpgbbuf' pgplot_related.c:(.text+0x18d): undefined reference to `cpgqwin' pgplot_related.c:(.text+0x1a8): undefined reference to `cpgqvp' pgplot_related.c:(.text+0x1b2): undefined reference to `cpgqch' pgplot_related.c:(.text+0x1bf): undefined reference to `cpgsch' pgplot_related.c:(.text+0x1d3): undefined reference to `cpgqcs' pgplot_related.c:(.text+0x245): undefined reference to `cpgsch' pgplot_related.c:(.text+0x2b1): undefined reference to `cpgsvp' pgplot_related.c:(.text+0x381): undefined reference to `cpgswin' pgplot_related.c:(.text+0x3ce): undefined reference to `cpggray' pgplot_related.c:(.text+0x3ea): undefined reference to `cpgswin' pgplot_related.c:(.text+0x422): undefined reference to `cpgbox' pgplot_related.c:(.text+0x44a): undefined reference to `cpgmtxt' pgplot_related.c:(.text+0x467): undefined reference to `cpgsvp' pgplot_related.c:(.text+0x490): undefined reference to `cpgswin' pgplot_related.c:(.text+0x49b): undefined reference to `cpgsch' pgplot_related.c:(.text+0x4a0): undefined reference to `cpgebuf' pgplot_related.c:(.text+0x571): undefined reference to `cpgswin' pgplot_related.c:(.text+0x5be): undefined reference to `cpggray' pgplot_related.c:(.text+0x5da): undefined reference to `cpgswin' pgplot_related.c:(.text+0x600): undefined reference to `cpgbox' pgplot_related.c:(.text+0x641): undefined reference to `cpgimag' pgplot_related.c:(.text+0x691): undefined reference to `cpgbox' pgplot_related.c:(.text+0x6ae): undefined reference to `cpgbox' pgplot_related.c:(.text+0x6b8): undefined reference to `cpgimag' ./src/Utils/pgplot_related.o: In function `cpgcumul': pgplot_related.c:(.text+0x8dc): undefined reference to `cpgbbuf' pgplot_related.c:(.text+0x8f7): undefined reference to `cpgmove' pgplot_related.c:(.text+0x927): undefined reference to `cpgdraw' pgplot_related.c:(.text+0x93f): undefined reference to `cpgdraw' pgplot_related.c:(.text+0x944): undefined reference to `cpgebuf' pgplot_related.c:(.text+0x97c): undefined reference to `cpgenv' pgplot_related.c:(.text+0x9c8): undefined reference to `cpgswin' ./src/Utils/pgplot_related.o: In function `cpghistlog': pgplot_related.c:(.text+0xa14): undefined reference to `cpgbbuf' pgplot_related.c:(.text+0xb6f): undefined reference to `cpgmove' pgplot_related.c:(.text+0xb98): undefined reference to `cpgmove' pgplot_related.c:(.text+0xbac): undefined reference to `cpgdraw' pgplot_related.c:(.text+0xbcf): undefined reference to `cpgdraw' pgplot_related.c:(.text+0xc2c): undefined reference to `cpgmove' pgplot_related.c:(.text+0xc40): undefined reference to `cpgdraw' pgplot_related.c:(.text+0xc5a): undefined reference to `cpgdraw' pgplot_related.c:(.text+0xc8f): undefined reference to `cpgenv' pgplot_related.c:(.text+0xca7): undefined reference to `cpgmove' pgplot_related.c:(.text+0xce9): undefined reference to `cpgmove' pgplot_related.c:(.text+0xd4d): undefined reference to `cpgdraw' pgplot_related.c:(.text+0xd75): undefined reference to `cpgmove' pgplot_related.c:(.text+0xd91): undefined reference to `cpgdraw' pgplot_related.c:(.text+0xe08): undefined reference to `cpgrect' ./src/Utils/pgplot_related.o: In function `cpgellipse': pgplot_related.c:(.text+0xf0d): undefined reference to `cpgmove' pgplot_related.c:(.text+0xfc3): undefined reference to `cpgdraw' ./src/Utils/pgplot_related.o: In function `cpghistlog': pgplot_related.c:(.text+0xb56): undefined reference to `cpgebuf' collect2: error: ld returned 1 exit status make: *** [duchamp] Error 1
configure output:
checking build system type... x86_64-unknown-linux-gnu checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for g77... no checking for xlf... no checking for f77... no checking for frt... no checking for pgf77... no checking for cf77... no checking for fort77... no checking for fl32... no checking for af77... no checking for xlf90... no checking for f90... no checking for pgf90... no checking for pghpf... no checking for epcf90... no checking for gfortran... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking whether ln -s works... yes checking for install... install checking for log in -lm... yes checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for unistd.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking math.h usability... yes checking math.h presence... yes checking for math.h... yes checking values.h usability... yes checking values.h presence... yes checking for values.h... yes checking iostream usability... no checking iostream presence... no checking for iostream... no checking fstream usability... no checking fstream presence... no checking for fstream... no checking sstream usability... no checking sstream presence... no checking for sstream... no checking iomanip usability... no checking iomanip presence... no checking for iomanip... no checking vector usability... no checking vector presence... no checking for vector... no checking string usability... no checking string presence... no checking for string... no checking algorithm usability... no checking algorithm presence... no checking for algorithm... no checking functional usability... no checking functional presence... no checking for functional... no checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for ranlib... ranlib configure: Using alternative (linux) build option checking for working strtod... yes checking for floor... yes checking for pow... yes checking for sqrt... yes checking for strtol... yes checking for log... yes checking for atan... yes checking for fabs... yes configure: LIBDIRS checking for /usr/lib... yes checking for /usr/local/lib... yes checking for /usr/local/pgplot... yes checking for /usr/local/cfitsio... no checking for /usr/local/wcslib... no checking for /local/lib... no checking for /local/pgplot... no checking for /local/cfitsio... no checking for /opt/SUNWspro/lib... no checking for /opt/local/lib... no configure: -- PGPLOT -- checking for /usr/include/cpgplot.h... yes checking for cosd in -lsunmath... no checking for iand_ in -lM77... no checking for f77_init in -lF77... no checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes configure: X-library search yielded X_CFLAGS=, X_LIBS=, X_EXTRA_LIBS=, X_PRE_LIBS= -lSM -lICE checking for deflate in -lz... yes checking for png_error in -lpng... yes checking for pgopen in -lpgplot... no checking for gerror_ in -lg2c... no checking for main in -lstdc++... yes checking for main in -lc++... no checking for _gfortran_getenv in -lgfortran... yes checking for cpgopen in -lcpgplot... no configure: PGPLOT appears to be available. checking for /usr/lib/libcpgplot.a... no checking for /usr/lib/lib/libcpgplot.a... no checking for /usr/lib/pgplot/libcpgplot.a... no checking for /usr/local/lib/libcpgplot.a... yes configure: -- CFITSIO -- checking for /usr/include/fitsio.h... yes checking for recv in -lsocket... no checking for ffopen in -lcfitsio... yes configure: CFITSIO appears to be available. checking for /usr/lib/libcfitsio.a... no checking for /usr/lib/cfitsio/libcfitsio.a... no checking for /usr/local/lib/libcfitsio.a... yes configure: -- WCSLIB -- checking for /usr/include/wcslib/wcs.h... no checking for /usr/local/include/wcslib/wcs.h... yes checking for wcss2p in -lwcs... yes checking for cpgsbox in -lpgsbox... no configure: WCSLIB appears to be available. checking for /usr/lib/libwcs.a... no checking for /usr/lib/wcs/libwcs.a... no checking for /usr/lib/wcslib/libwcs.a... no checking for /usr/local/lib/libwcs.a... yes checking for /usr/local/lib/libpgsbox.a... yes checking for /usr/local/pgplot/libwcs.a... no checking for /usr/local/pgplot/wcs/libwcs.a... no checking for /usr/local/pgplot/wcslib/libwcs.a... no checking for /usr/local/cfitsio/libwcs.a... no checking for /usr/local/cfitsio/wcs/libwcs.a... no checking for /usr/local/cfitsio/wcslib/libwcs.a... no checking for /usr/local/wcslib/libwcs.a... no checking for /usr/local/wcslib/wcs/libwcs.a... no checking for /usr/local/wcslib/wcslib/libwcs.a... no checking for /local/lib/libwcs.a... no checking for /local/lib/wcs/libwcs.a... no checking for /local/lib/wcslib/libwcs.a... no checking for /local/pgplot/libwcs.a... no checking for /local/pgplot/wcs/libwcs.a... no checking for /local/pgplot/wcslib/libwcs.a... no checking for /local/cfitsio/libwcs.a... no checking for /local/cfitsio/wcs/libwcs.a... no checking for /local/cfitsio/wcslib/libwcs.a... no checking for /opt/SUNWspro/lib/libwcs.a... no checking for /opt/SUNWspro/lib/wcs/libwcs.a... no checking for /opt/SUNWspro/lib/wcslib/libwcs.a... no checking for /opt/local/lib/libwcs.a... no checking for /opt/local/lib/wcs/libwcs.a... no checking for /opt/local/lib/wcslib/libwcs.a... no configure: creating ./config.status config.status: creating Makefile config.status: creating src/config.h
Change History (2)
comment:1 Changed 9 years ago by
Description: | modified (diff) |
---|---|
Status: | new → assigned |
comment:2 Changed 9 years ago by
Resolution: | → fixed |
---|---|
Status: | assigned → closed |
Reply from Laura:
Hi Matthew Thanks! I just needed to set the x libraries: ./configure --x-libraries=/usr/lib/x86_64-linux-gnu Cheers, Laura
Closing ticket - please re-open if problems persist...
Note: See
TracTickets for help on using
tickets.
Hi,
It looks as if it has had a problem building against the pgplot library. While configure has indeed found the libcpgplot.a, the test program appears to have failed.
What I think the problem is is that it has not been able to find the X libraries. I've seen this problem occasionally on some machines - even if they are there, the configure script fails to find them.
You can manually specify their location via
If you attach the config.log and Makefile, I can have a look and verify that this is indeed what is happening.
Cheers, Matt.