[1221] | 1 | CFLAGS = -O2 -ftree-vectorize -fPIC |
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[107] | 2 | |
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[794] | 3 | FFLAGS = -fast -O4 |
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[107] | 4 | |
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[652] | 5 | CC = @CC@ $(CFLAGS) |
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| 6 | CXX = @CXX@ $(CFLAGS) |
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[110] | 7 | F77= @F77@ $(FFLAGS) |
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[384] | 8 | LINK= @LINKER@ |
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[107] | 9 | |
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[108] | 10 | BASE = ./src |
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[107] | 11 | |
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[343] | 12 | INSTALLDIR = @prefix@/bin |
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[389] | 13 | LIBDIR = @prefix@/lib |
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| 14 | INCDIR = @prefix@/include/duchamp |
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[107] | 15 | |
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[338] | 16 | V = @PACKAGE_VERSION@ |
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| 17 | EXEC = Duchamp-$(V) |
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| 18 | EXEC-STUB = Duchamp |
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[107] | 19 | |
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[389] | 20 | AR = ar cq |
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[1227] | 21 | LIB = libduchamp-$(V).a |
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| 22 | LIB_LN = libduchamp.a |
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[719] | 23 | RANLIB = ranlib |
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[1224] | 24 | SHAREDLIB = @SHRLD@ |
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| 25 | #SHAREDFLAGS = -shared -Wl,-soname,@SHRLIB@ |
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[1221] | 26 | LIBSO = @SHRLIB@ |
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| 27 | LIBSO_LN = @SHRLN@ |
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[389] | 28 | |
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[338] | 29 | INSTALL = @INSTALL@ |
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| 30 | LN_S = @LN_S@ |
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| 31 | |
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[107] | 32 | PGPLOTINC = @PGPLOTINC@ |
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| 33 | PGPLOTLIB = @PGPLOTLIB@ |
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| 34 | |
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| 35 | CFITSIOINC = @CFITSIOINC@ |
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| 36 | CFITSIOLIB = @CFITSIOLIB@ |
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| 37 | |
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| 38 | WCSINC = @WCSINC@ |
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| 39 | WCSLIB = @WCSLIB@ |
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| 40 | |
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[1114] | 41 | CINC = -I$(BASE) $(PGPLOTINC) $(WCSINC) $(CFITSIOINC) |
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[107] | 42 | |
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[938] | 43 | LIBS = $(WCSLIB) $(CFITSIOLIB) $(PGPLOTLIB) |
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[107] | 44 | |
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| 45 | ATROUSDIR = $(BASE)/ATrous |
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[261] | 46 | PIXELMAPDIR = $(BASE)/PixelMap |
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[107] | 47 | DETECTIONDIR = $(BASE)/Detection |
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| 48 | CUBESDIR = $(BASE)/Cubes |
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[165] | 49 | FITSIODIR = $(BASE)/FitsIO |
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[1243] | 50 | PLOTDIR = $(BASE)/Plotting |
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[107] | 51 | UTILDIR = $(BASE)/Utils |
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[1048] | 52 | OUTPUTSDIR = $(BASE)/Outputs |
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[148] | 53 | TESTDIR = ./verification |
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[107] | 54 | |
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[1181] | 55 | HEADS = $(BASE)/config.h\ |
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| 56 | $(BASE)/duchamp.hh\ |
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[315] | 57 | $(BASE)/pgheader.hh\ |
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[107] | 58 | $(BASE)/param.hh\ |
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[272] | 59 | $(BASE)/fitsHeader.hh\ |
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[1293] | 60 | $(PIXELMAPDIR)/Line.hh\ |
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[258] | 61 | $(PIXELMAPDIR)/Voxel.hh\ |
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| 62 | $(PIXELMAPDIR)/Scan.hh\ |
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| 63 | $(PIXELMAPDIR)/Object2D.hh\ |
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| 64 | $(PIXELMAPDIR)/Object3D.hh\ |
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[107] | 65 | $(ATROUSDIR)/atrous.hh\ |
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[232] | 66 | $(ATROUSDIR)/filter.hh\ |
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[107] | 67 | $(DETECTIONDIR)/detection.hh\ |
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[582] | 68 | $(DETECTIONDIR)/finders.hh\ |
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[750] | 69 | $(DETECTIONDIR)/ObjectGrower.hh\ |
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[107] | 70 | $(CUBESDIR)/cubes.hh\ |
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[798] | 71 | $(FITSIODIR)/Beam.hh\ |
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| 72 | $(FITSIODIR)/DuchampBeam.hh\ |
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[1125] | 73 | $(FITSIODIR)/ReadExisting.hh\ |
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| 74 | $(FITSIODIR)/ReadExistingRecon.hh\ |
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| 75 | $(FITSIODIR)/ReadExistingSmooth.hh\ |
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| 76 | $(FITSIODIR)/WriteArray.hh\ |
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| 77 | $(FITSIODIR)/WriteBaselineArray.hh\ |
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| 78 | $(FITSIODIR)/WriteMaskArray.hh\ |
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| 79 | $(FITSIODIR)/WriteMomentMapArray.hh\ |
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[1142] | 80 | $(FITSIODIR)/WriteMomentMaskArray.hh\ |
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[1125] | 81 | $(FITSIODIR)/WriteReconArray.hh\ |
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| 82 | $(FITSIODIR)/WriteSmoothArray.hh\ |
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[1243] | 83 | $(PLOTDIR)/DuchampPlot.hh\ |
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| 84 | $(PLOTDIR)/MultipleDuchampPlot.hh\ |
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| 85 | $(PLOTDIR)/ImagePlot.hh\ |
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| 86 | $(PLOTDIR)/SpectralPlot.hh\ |
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| 87 | $(PLOTDIR)/SimpleSpectralPlot.hh\ |
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| 88 | $(PLOTDIR)/CutoutPlot.hh\ |
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[275] | 89 | $(UTILDIR)/Hanning.hh\ |
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[638] | 90 | $(UTILDIR)/GaussSmooth1D.hh\ |
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| 91 | $(UTILDIR)/GaussSmooth2D.hh\ |
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[258] | 92 | $(UTILDIR)/Section.hh\ |
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[201] | 93 | $(UTILDIR)/Statistics.hh\ |
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[275] | 94 | $(UTILDIR)/utils.hh\ |
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| 95 | $(UTILDIR)/feedback.hh\ |
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[916] | 96 | $(UTILDIR)/mycpgplot.hh\ |
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| 97 | $(UTILDIR)/VOField.hh\ |
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[1048] | 98 | $(UTILDIR)/VOParam.hh\ |
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[1061] | 99 | $(OUTPUTSDIR)/columns.hh\ |
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| 100 | $(OUTPUTSDIR)/CatalogueSpecification.hh\ |
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[1048] | 101 | $(OUTPUTSDIR)/CatalogueWriter.hh\ |
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[1080] | 102 | $(OUTPUTSDIR)/FileCatalogueWriter.hh\ |
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[1048] | 103 | $(OUTPUTSDIR)/ASCIICatalogueWriter.hh\ |
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[1072] | 104 | $(OUTPUTSDIR)/VOTableCatalogueWriter.hh\ |
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| 105 | $(OUTPUTSDIR)/AnnotationWriter.hh\ |
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| 106 | $(OUTPUTSDIR)/KarmaAnnotationWriter.hh\ |
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[1126] | 107 | $(OUTPUTSDIR)/DS9AnnotationWriter.hh\ |
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| 108 | $(OUTPUTSDIR)/CasaAnnotationWriter.hh |
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[107] | 109 | |
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[318] | 110 | OBJECTS-NOPG = $(BASE)/mainDuchamp.o \ |
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[123] | 111 | $(BASE)/duchamp.o\ |
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[108] | 112 | $(BASE)/param.o\ |
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[272] | 113 | $(BASE)/fitsHeader.o\ |
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[1293] | 114 | $(PIXELMAPDIR)/Line.o\ |
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[258] | 115 | $(PIXELMAPDIR)/Voxel.o\ |
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| 116 | $(PIXELMAPDIR)/Scan.o\ |
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| 117 | $(PIXELMAPDIR)/Object2D.o\ |
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| 118 | $(PIXELMAPDIR)/Object3D.o\ |
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[232] | 119 | $(ATROUSDIR)/filter.o\ |
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[107] | 120 | $(ATROUSDIR)/atrous_1d_reconstruct.o\ |
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| 121 | $(ATROUSDIR)/atrous_2d_reconstruct.o\ |
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| 122 | $(ATROUSDIR)/atrous_3d_reconstruct.o\ |
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| 123 | $(ATROUSDIR)/baselineSubtract.o\ |
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| 124 | $(ATROUSDIR)/ReconSearch.o\ |
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| 125 | $(DETECTIONDIR)/detection.o\ |
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[750] | 126 | $(DETECTIONDIR)/ObjectGrower.o\ |
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[107] | 127 | $(DETECTIONDIR)/areClose.o\ |
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| 128 | $(DETECTIONDIR)/lutz_detect.o\ |
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| 129 | $(DETECTIONDIR)/mergeIntoList.o\ |
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| 130 | $(DETECTIONDIR)/outputDetection.o\ |
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| 131 | $(DETECTIONDIR)/sorting.o\ |
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| 132 | $(DETECTIONDIR)/spectrumDetect.o\ |
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| 133 | $(CUBESDIR)/cubes.o\ |
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[224] | 134 | $(CUBESDIR)/cubes_extended.o\ |
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[107] | 135 | $(CUBESDIR)/baseline.o\ |
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[177] | 136 | $(CUBESDIR)/CubicSearch.o\ |
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[107] | 137 | $(CUBESDIR)/detectionIO.o\ |
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[475] | 138 | $(CUBESDIR)/existingDetections.o\ |
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[107] | 139 | $(CUBESDIR)/getImage.o\ |
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| 140 | $(CUBESDIR)/invertCube.o\ |
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| 141 | $(CUBESDIR)/Merger.o\ |
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[680] | 142 | $(CUBESDIR)/momentMap.o\ |
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[201] | 143 | $(CUBESDIR)/smoothCube.o\ |
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[463] | 144 | $(CUBESDIR)/spectraUtils.o\ |
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[107] | 145 | $(CUBESDIR)/trimImage.o\ |
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[798] | 146 | $(FITSIODIR)/Beam.o\ |
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| 147 | $(FITSIODIR)/DuchampBeam.o\ |
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[1125] | 148 | $(FITSIODIR)/ReadExisting.o\ |
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| 149 | $(FITSIODIR)/ReadExistingRecon.o\ |
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| 150 | $(FITSIODIR)/ReadExistingSmooth.o\ |
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| 151 | $(FITSIODIR)/WriteArray.o\ |
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| 152 | $(FITSIODIR)/WriteBaselineArray.o\ |
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| 153 | $(FITSIODIR)/WriteMaskArray.o\ |
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| 154 | $(FITSIODIR)/WriteMomentMapArray.o\ |
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[1142] | 155 | $(FITSIODIR)/WriteMomentMaskArray.o\ |
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[1125] | 156 | $(FITSIODIR)/WriteReconArray.o\ |
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| 157 | $(FITSIODIR)/WriteSmoothArray.o\ |
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[165] | 158 | $(FITSIODIR)/dataIO.o\ |
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| 159 | $(FITSIODIR)/headerIO.o\ |
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| 160 | $(FITSIODIR)/subsection.o\ |
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| 161 | $(FITSIODIR)/wcsIO.o\ |
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[258] | 162 | $(UTILDIR)/Section.o\ |
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[201] | 163 | $(UTILDIR)/Statistics.o\ |
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[220] | 164 | $(UTILDIR)/feedback.o\ |
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[638] | 165 | $(UTILDIR)/GaussSmooth1D.o\ |
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[221] | 166 | $(UTILDIR)/Hanning.o\ |
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[916] | 167 | $(UTILDIR)/VOField.o\ |
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| 168 | $(UTILDIR)/VOParam.o\ |
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[107] | 169 | $(UTILDIR)/getStats.o\ |
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[849] | 170 | $(UTILDIR)/getNormalStats.o\ |
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| 171 | $(UTILDIR)/getRobustStats.o\ |
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[107] | 172 | $(UTILDIR)/linear_regression.o\ |
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[1261] | 173 | $(UTILDIR)/medianBaseline.o\ |
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[107] | 174 | $(UTILDIR)/position_related.o\ |
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| 175 | $(UTILDIR)/sort.o\ |
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[733] | 176 | $(UTILDIR)/string_related.o\ |
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[107] | 177 | $(UTILDIR)/wcsFunctions.o\ |
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[1048] | 178 | $(UTILDIR)/zscale.o\ |
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[1061] | 179 | $(OUTPUTSDIR)/columns.o\ |
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| 180 | $(OUTPUTSDIR)/CatalogueSpecification.o\ |
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[1048] | 181 | $(OUTPUTSDIR)/CatalogueWriter.o\ |
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[1080] | 182 | $(OUTPUTSDIR)/FileCatalogueWriter.o\ |
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[1048] | 183 | $(OUTPUTSDIR)/ASCIICatalogueWriter.o\ |
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[1072] | 184 | $(OUTPUTSDIR)/VOTableCatalogueWriter.o\ |
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| 185 | $(OUTPUTSDIR)/AnnotationWriter.o\ |
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| 186 | $(OUTPUTSDIR)/KarmaAnnotationWriter.o\ |
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[1126] | 187 | $(OUTPUTSDIR)/DS9AnnotationWriter.o\ |
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| 188 | $(OUTPUTSDIR)/CasaAnnotationWriter.o |
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[107] | 189 | |
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[384] | 190 | ifeq ($(strip $(PGPLOTLIB)),) |
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[318] | 191 | OBJECTS = $(OBJECTS-NOPG) |
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| 192 | else |
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| 193 | OBJECTS = $(OBJECTS-NOPG)\ |
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| 194 | $(CUBESDIR)/drawBlankEdges.o\ |
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| 195 | $(CUBESDIR)/drawMomentCutout.o\ |
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| 196 | $(CUBESDIR)/outputSpectra.o\ |
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| 197 | $(CUBESDIR)/plotting.o\ |
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[1302] | 198 | $(DETECTIONDIR)/drawBorders.o\ |
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[1243] | 199 | $(PLOTDIR)/DuchampPlot.o\ |
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| 200 | $(PLOTDIR)/MultipleDuchampPlot.o\ |
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| 201 | $(PLOTDIR)/ImagePlot.o\ |
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| 202 | $(PLOTDIR)/SpectralPlot.o\ |
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| 203 | $(PLOTDIR)/SimpleSpectralPlot.o\ |
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| 204 | $(PLOTDIR)/CutoutPlot.o\ |
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[332] | 205 | $(UTILDIR)/mycpgplot.o\ |
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[1250] | 206 | $(UTILDIR)/PlottingUtilities.o\ |
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[332] | 207 | $(UTILDIR)/pgplot_related.o |
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[318] | 208 | endif |
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| 209 | |
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[108] | 210 | duchamp : $(OBJECTS) |
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[384] | 211 | $(LINK) -o $(EXEC) $(OBJECTS) $(LIBS) |
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[107] | 212 | |
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[389] | 213 | lib : $(OBJECTS) |
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| 214 | $(AR) $(LIB) $(OBJECTS) |
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[719] | 215 | $(RANLIB) $(LIB) |
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[1224] | 216 | $(SHAREDLIB) $(CINC) $(LIBS) -o $(LIBSO) $(OBJECTS) |
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| 217 | # $(CXX) $(SHAREDFLAGS) -o $(LIBSO) $(OBJECTS) |
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[389] | 218 | |
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[149] | 219 | createTestImage : $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o |
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[148] | 220 | $(CXX) -o createTestImage.x\ |
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[149] | 221 | $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o\ |
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[148] | 222 | $(CFITSIOLIB) @LIBS@ |
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| 223 | |
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[338] | 224 | install : |
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| 225 | $(INSTALL) -d -m 2755 $(INSTALLDIR) |
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| 226 | $(INSTALL) -m 755 $(EXEC) $(INSTALLDIR) |
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| 227 | $(RM) $(INSTALLDIR)/$(EXEC-STUB) |
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[514] | 228 | cd $(INSTALLDIR) && $(LN_S) $(EXEC) $(EXEC-STUB) |
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[432] | 229 | -test ! -f $(LIB) || $(INSTALL) -d -m 2755 $(LIBDIR) |
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| 230 | -test ! -f $(LIB) || $(INSTALL) -m 644 $(LIB) $(LIBDIR) |
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[1292] | 231 | -test ! -f $(LIB) || ( cd $(LIBDIR) && $(RM) $(LIB_LN) && $(LN_S) $(LIB) $(LIB_LN) ) |
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| 232 | -test ! -f $(LIBSO) || ( $(INSTALL) -m 755 $(LIBSO) $(LIBDIR) && \ |
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[1238] | 233 | if [ "@SHRLN@" != "" ] ; then \ |
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| 234 | cd $(LIBDIR) && $(RM) $(LIBSO_LN) && $(LN_S) $(LIBSO) $(LIBSO_LN); \ |
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[1292] | 235 | fi ) |
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[389] | 236 | $(INSTALL) -d -m 2755 $(INCDIR) |
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| 237 | $(INSTALL) -m 644 $(BASE)/*.hh $(INCDIR) |
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[397] | 238 | $(INSTALL) -m 644 $(BASE)/*.h $(INCDIR) |
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[389] | 239 | $(INSTALL) -d -m 2755 $(INCDIR)/Cubes |
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| 240 | $(INSTALL) -m 644 $(CUBESDIR)/*.hh $(INCDIR)/Cubes |
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| 241 | $(INSTALL) -d -m 2755 $(INCDIR)/ATrous |
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| 242 | $(INSTALL) -m 644 $(ATROUSDIR)/*.hh $(INCDIR)/ATrous |
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| 243 | $(INSTALL) -d -m 2755 $(INCDIR)/Detection |
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| 244 | $(INSTALL) -m 644 $(DETECTIONDIR)/*.hh $(INCDIR)/Detection |
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[807] | 245 | $(INSTALL) -d -m 2755 $(INCDIR)/FitsIO |
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| 246 | $(INSTALL) -m 644 $(FITSIODIR)/*.hh $(INCDIR)/FitsIO |
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[1243] | 247 | $(INSTALL) -d -m 2755 $(INCDIR)/Plotting |
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| 248 | $(INSTALL) -m 644 $(PLOTDIR)/*.hh $(INCDIR)/Plotting |
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[389] | 249 | $(INSTALL) -d -m 2755 $(INCDIR)/PixelMap |
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| 250 | $(INSTALL) -m 644 $(PIXELMAPDIR)/*.hh $(INCDIR)/PixelMap |
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[1068] | 251 | $(INSTALL) -d -m 2755 $(INCDIR)/Outputs |
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| 252 | $(INSTALL) -m 644 $(OUTPUTSDIR)/*.hh $(INCDIR)/Outputs |
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[389] | 253 | $(INSTALL) -d -m 2755 $(INCDIR)/Utils |
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| 254 | $(INSTALL) -m 644 $(UTILDIR)/*.hh $(INCDIR)/Utils |
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[713] | 255 | $(INSTALL) -m 644 $(UTILDIR)/*.tcc $(INCDIR)/Utils |
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[338] | 256 | |
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[107] | 257 | $(OBJECTS) : $(HEADS) |
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| 258 | |
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| 259 | .cc.o: |
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| 260 | $(CXX) -c $< $(CINC) -o $@ |
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| 261 | |
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| 262 | .c.o: |
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| 263 | $(CC) -c $< $(CINC) -o $@ |
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| 264 | |
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| 265 | clean : |
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[1243] | 266 | rm -f $(BASE)/*.o $(ATROUSDIR)/*.o $(CUBESDIR)/*.o $(FITSIODIR)/*.o $(DETECTIONDIR)/*.o $(UTILDIR)/*.o $(PIXELMAPDIR)/*.o $(PLOTDIR)/*.o $(LIB) $(LIBSO) |
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[1088] | 267 | |
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| 268 | cleanest: clean |
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| 269 | rm -rf Makefile config.log config.status src/config.h $(EXEC) |
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