source: trunk/Makefile.in @ 1339

Last change on this file since 1339 was 1339, checked in by MatthewWhiting, 10 years ago

Fixing #210, with new Filter classes deriving from Filter that take care of the specific instantiation, as well as a FilterFactory? class to handle the selection. Param::reconFilter is now a
pointer, but the interface to it remains via a reference.
File size: 7.8 KB
Line 
1CFLAGS = -O2 -ftree-vectorize -fPIC
2
3FFLAGS = -fast -O4
4
5CC =    @CC@ $(CFLAGS)
6CXX =   @CXX@ $(CFLAGS)
7F77=    @F77@ $(FFLAGS)
8LINK=   @LINKER@
9
10BASE = ./src
11
12INSTALLDIR = @prefix@/bin
13LIBDIR = @prefix@/lib
14INCDIR = @prefix@/include/duchamp
15
16V = @PACKAGE_VERSION@
17EXEC = Duchamp-$(V)
18EXEC-STUB = Duchamp
19
20AR = ar cq
21LIB = libduchamp-$(V).a
22LIB_LN = libduchamp.a
23RANLIB = ranlib
24SHAREDLIB = @SHRLD@
25#SHAREDFLAGS = -shared -Wl,-soname,@SHRLIB@
26LIBSO = @SHRLIB@
27LIBSO_LN = @SHRLN@
28
29INSTALL = @INSTALL@
30LN_S = @LN_S@
31
32PGPLOTINC = @PGPLOTINC@
33PGPLOTLIB = @PGPLOTLIB@
34
35CFITSIOINC = @CFITSIOINC@
36CFITSIOLIB = @CFITSIOLIB@
37
38WCSINC = @WCSINC@
39WCSLIB = @WCSLIB@
40
41CINC = -I$(BASE) $(PGPLOTINC) $(WCSINC) $(CFITSIOINC)
42
43LIBS = $(WCSLIB) $(CFITSIOLIB) $(PGPLOTLIB)
44
45ATROUSDIR = $(BASE)/ATrous
46PIXELMAPDIR = $(BASE)/PixelMap
47DETECTIONDIR = $(BASE)/Detection
48CUBESDIR = $(BASE)/Cubes
49FITSIODIR = $(BASE)/FitsIO
50PLOTDIR = $(BASE)/Plotting
51UTILDIR = $(BASE)/Utils
52OUTPUTSDIR = $(BASE)/Outputs
53TESTDIR = ./verification
54
55HEADS = $(BASE)/config.h\
56        $(BASE)/duchamp.hh\
57        $(BASE)/pgheader.hh\
58        $(BASE)/param.hh\
59        $(BASE)/fitsHeader.hh\
60        $(PIXELMAPDIR)/Line.hh\
61        $(PIXELMAPDIR)/Voxel.hh\
62        $(PIXELMAPDIR)/Scan.hh\
63        $(PIXELMAPDIR)/Object2D.hh\
64        $(PIXELMAPDIR)/Object3D.hh\
65        $(ATROUSDIR)/atrous.hh\
66        $(ATROUSDIR)/filter.hh\
67        $(ATROUSDIR)/B3SplineFilter.hh\
68        $(ATROUSDIR)/TriangleFilter.hh\
69        $(ATROUSDIR)/HaarFilter.hh\
70        $(ATROUSDIR)/FilterFactory.hh\
71        $(DETECTIONDIR)/detection.hh\
72        $(DETECTIONDIR)/finders.hh\
73        $(DETECTIONDIR)/ObjectGrower.hh\
74        $(CUBESDIR)/cubes.hh\
75        $(FITSIODIR)/Beam.hh\
76        $(FITSIODIR)/DuchampBeam.hh\
77        $(FITSIODIR)/ReadExisting.hh\
78        $(FITSIODIR)/ReadExistingRecon.hh\
79        $(FITSIODIR)/ReadExistingSmooth.hh\
80        $(FITSIODIR)/WriteArray.hh\
81        $(FITSIODIR)/WriteBaselineArray.hh\
82        $(FITSIODIR)/WriteMaskArray.hh\
83        $(FITSIODIR)/WriteMomentMapArray.hh\
84        $(FITSIODIR)/WriteMomentMaskArray.hh\
85        $(FITSIODIR)/WriteReconArray.hh\
86        $(FITSIODIR)/WriteSmoothArray.hh\
87        $(PLOTDIR)/DuchampPlot.hh\
88        $(PLOTDIR)/MultipleDuchampPlot.hh\
89        $(PLOTDIR)/ImagePlot.hh\
90        $(PLOTDIR)/SpectralPlot.hh\
91        $(PLOTDIR)/SimpleSpectralPlot.hh\
92        $(PLOTDIR)/CutoutPlot.hh\
93        $(UTILDIR)/Hanning.hh\
94        $(UTILDIR)/GaussSmooth1D.hh\
95        $(UTILDIR)/GaussSmooth2D.hh\
96        $(UTILDIR)/Section.hh\
97        $(UTILDIR)/Statistics.hh\
98        $(UTILDIR)/utils.hh\
99        $(UTILDIR)/feedback.hh\
100        $(UTILDIR)/mycpgplot.hh\
101        $(UTILDIR)/VOField.hh\
102        $(UTILDIR)/VOParam.hh\
103        $(OUTPUTSDIR)/columns.hh\
104        $(OUTPUTSDIR)/CatalogueSpecification.hh\
105        $(OUTPUTSDIR)/CatalogueWriter.hh\
106        $(OUTPUTSDIR)/FileCatalogueWriter.hh\
107        $(OUTPUTSDIR)/ASCIICatalogueWriter.hh\
108        $(OUTPUTSDIR)/VOTableCatalogueWriter.hh\
109        $(OUTPUTSDIR)/AnnotationWriter.hh\
110        $(OUTPUTSDIR)/KarmaAnnotationWriter.hh\
111        $(OUTPUTSDIR)/DS9AnnotationWriter.hh\
112        $(OUTPUTSDIR)/CasaAnnotationWriter.hh
113
114OBJECTS-NOPG = $(BASE)/mainDuchamp.o \
115        $(BASE)/duchamp.o\
116        $(BASE)/param.o\
117        $(BASE)/fitsHeader.o\
118        $(PIXELMAPDIR)/Line.o\
119        $(PIXELMAPDIR)/Voxel.o\
120        $(PIXELMAPDIR)/Scan.o\
121        $(PIXELMAPDIR)/Object2D.o\
122        $(PIXELMAPDIR)/Object3D.o\
123        $(ATROUSDIR)/filter.o\
124        $(ATROUSDIR)/B3SplineFilter.o\
125        $(ATROUSDIR)/TriangleFilter.o\
126        $(ATROUSDIR)/HaarFilter.o\
127        $(ATROUSDIR)/FilterFactory.o\
128        $(ATROUSDIR)/atrous_1d_reconstruct.o\
129        $(ATROUSDIR)/atrous_2d_reconstruct.o\
130        $(ATROUSDIR)/atrous_3d_reconstruct.o\
131        $(ATROUSDIR)/baselineSubtract.o\
132        $(ATROUSDIR)/ReconSearch.o\
133        $(DETECTIONDIR)/detection.o\
134        $(DETECTIONDIR)/ObjectGrower.o\
135        $(DETECTIONDIR)/areClose.o\
136        $(DETECTIONDIR)/lutz_detect.o\
137        $(DETECTIONDIR)/mergeIntoList.o\
138        $(DETECTIONDIR)/outputDetection.o\
139        $(DETECTIONDIR)/sorting.o\
140        $(DETECTIONDIR)/spectrumDetect.o\
141        $(CUBESDIR)/cubes.o\
142        $(CUBESDIR)/cubes_extended.o\
143        $(CUBESDIR)/baseline.o\
144        $(CUBESDIR)/CubicSearch.o\
145        $(CUBESDIR)/detectionIO.o\
146        $(CUBESDIR)/existingDetections.o\
147        $(CUBESDIR)/getImage.o\
148        $(CUBESDIR)/invertCube.o\
149        $(CUBESDIR)/Merger.o\
150        $(CUBESDIR)/momentMap.o\
151        $(CUBESDIR)/smoothCube.o\
152        $(CUBESDIR)/spectraUtils.o\
153        $(CUBESDIR)/trimImage.o\
154        $(FITSIODIR)/Beam.o\
155        $(FITSIODIR)/DuchampBeam.o\
156        $(FITSIODIR)/ReadExisting.o\
157        $(FITSIODIR)/ReadExistingRecon.o\
158        $(FITSIODIR)/ReadExistingSmooth.o\
159        $(FITSIODIR)/WriteArray.o\
160        $(FITSIODIR)/WriteBaselineArray.o\
161        $(FITSIODIR)/WriteMaskArray.o\
162        $(FITSIODIR)/WriteMomentMapArray.o\
163        $(FITSIODIR)/WriteMomentMaskArray.o\
164        $(FITSIODIR)/WriteReconArray.o\
165        $(FITSIODIR)/WriteSmoothArray.o\
166        $(FITSIODIR)/dataIO.o\
167        $(FITSIODIR)/headerIO.o\
168        $(FITSIODIR)/subsection.o\
169        $(FITSIODIR)/wcsIO.o\
170        $(UTILDIR)/Section.o\
171        $(UTILDIR)/Statistics.o\
172        $(UTILDIR)/feedback.o\
173        $(UTILDIR)/GaussSmooth1D.o\
174        $(UTILDIR)/Hanning.o\
175        $(UTILDIR)/VOField.o\
176        $(UTILDIR)/VOParam.o\
177        $(UTILDIR)/getStats.o\
178        $(UTILDIR)/getNormalStats.o\
179        $(UTILDIR)/getRobustStats.o\
180        $(UTILDIR)/linear_regression.o\
181        $(UTILDIR)/medianBaseline.o\
182        $(UTILDIR)/position_related.o\
183        $(UTILDIR)/sort.o\
184        $(UTILDIR)/string_related.o\
185        $(UTILDIR)/wcsFunctions.o\
186        $(UTILDIR)/zscale.o\
187        $(OUTPUTSDIR)/columns.o\
188        $(OUTPUTSDIR)/CatalogueSpecification.o\
189        $(OUTPUTSDIR)/CatalogueWriter.o\
190        $(OUTPUTSDIR)/FileCatalogueWriter.o\
191        $(OUTPUTSDIR)/ASCIICatalogueWriter.o\
192        $(OUTPUTSDIR)/VOTableCatalogueWriter.o\
193        $(OUTPUTSDIR)/AnnotationWriter.o\
194        $(OUTPUTSDIR)/KarmaAnnotationWriter.o\
195        $(OUTPUTSDIR)/DS9AnnotationWriter.o\
196        $(OUTPUTSDIR)/CasaAnnotationWriter.o
197
198ifeq ($(strip $(PGPLOTLIB)),)
199  OBJECTS = $(OBJECTS-NOPG)
200else
201  OBJECTS = $(OBJECTS-NOPG)\
202        $(CUBESDIR)/drawBlankEdges.o\
203        $(CUBESDIR)/drawMomentCutout.o\
204        $(CUBESDIR)/outputSpectra.o\
205        $(CUBESDIR)/plotting.o\
206        $(DETECTIONDIR)/drawBorders.o\
207        $(PLOTDIR)/DuchampPlot.o\
208        $(PLOTDIR)/MultipleDuchampPlot.o\
209        $(PLOTDIR)/ImagePlot.o\
210        $(PLOTDIR)/SpectralPlot.o\
211        $(PLOTDIR)/SimpleSpectralPlot.o\
212        $(PLOTDIR)/CutoutPlot.o\
213        $(UTILDIR)/mycpgplot.o\
214        $(UTILDIR)/PlottingUtilities.o\
215        $(UTILDIR)/pgplot_related.o
216endif
217
218duchamp : $(OBJECTS)
219        $(LINK) -o $(EXEC) $(OBJECTS) $(LIBS)
220
221lib     : $(OBJECTS)
222        $(AR) $(LIB) $(OBJECTS)
223        $(RANLIB) $(LIB)
224        $(SHAREDLIB) $(CINC) $(LIBS) -o $(LIBSO) $(OBJECTS)
225#       $(CXX) $(SHAREDFLAGS) -o $(LIBSO) $(OBJECTS)
226
227createTestImage : $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o
228        $(CXX) -o createTestImage.x\
229        $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o\
230        $(CFITSIOLIB) @LIBS@
231
232install :
233        $(INSTALL) -d -m 2755 $(INSTALLDIR)
234        $(INSTALL) -m 755 $(EXEC) $(INSTALLDIR)
235        $(RM) $(INSTALLDIR)/$(EXEC-STUB)
236        cd $(INSTALLDIR) && $(LN_S) $(EXEC) $(EXEC-STUB)
237        -test ! -f $(LIB) || $(INSTALL) -d -m 2755 $(LIBDIR)
238        -test ! -f $(LIB) || $(INSTALL) -m 644 $(LIB) $(LIBDIR)
239        -test ! -f $(LIB) || ( cd $(LIBDIR) && $(RM) $(LIB_LN) && $(LN_S) $(LIB) $(LIB_LN) )
240        -test ! -f $(LIBSO) || ( $(INSTALL) -m 755 $(LIBSO) $(LIBDIR) && \
241                if [ "@SHRLN@" != "" ] ; then \
242                        cd $(LIBDIR) && $(RM) $(LIBSO_LN) && $(LN_S) $(LIBSO) $(LIBSO_LN); \
243                fi )
244        $(INSTALL) -d -m 2755 $(INCDIR)
245        $(INSTALL) -m 644 $(BASE)/*.hh $(INCDIR)
246        $(INSTALL) -m 644 $(BASE)/*.h $(INCDIR)
247        $(INSTALL) -d -m 2755 $(INCDIR)/Cubes
248        $(INSTALL) -m 644 $(CUBESDIR)/*.hh $(INCDIR)/Cubes
249        $(INSTALL) -d -m 2755 $(INCDIR)/ATrous
250        $(INSTALL) -m 644 $(ATROUSDIR)/*.hh $(INCDIR)/ATrous
251        $(INSTALL) -d -m 2755 $(INCDIR)/Detection
252        $(INSTALL) -m 644 $(DETECTIONDIR)/*.hh $(INCDIR)/Detection
253        $(INSTALL) -d -m 2755 $(INCDIR)/FitsIO
254        $(INSTALL) -m 644 $(FITSIODIR)/*.hh $(INCDIR)/FitsIO
255        $(INSTALL) -d -m 2755 $(INCDIR)/Plotting
256        $(INSTALL) -m 644 $(PLOTDIR)/*.hh $(INCDIR)/Plotting
257        $(INSTALL) -d -m 2755 $(INCDIR)/PixelMap
258        $(INSTALL) -m 644 $(PIXELMAPDIR)/*.hh $(INCDIR)/PixelMap
259        $(INSTALL) -d -m 2755 $(INCDIR)/Outputs
260        $(INSTALL) -m 644 $(OUTPUTSDIR)/*.hh $(INCDIR)/Outputs
261        $(INSTALL) -d -m 2755 $(INCDIR)/Utils
262        $(INSTALL) -m 644 $(UTILDIR)/*.hh $(INCDIR)/Utils
263        $(INSTALL) -m 644 $(UTILDIR)/*.tcc $(INCDIR)/Utils
264
265$(OBJECTS) : $(HEADS)
266
267.cc.o:
268        $(CXX) -c $< $(CINC) -o $@
269
270.c.o:
271        $(CC) -c $< $(CINC) -o $@
272
273clean :
274        rm -f $(BASE)/*.o $(ATROUSDIR)/*.o $(CUBESDIR)/*.o $(FITSIODIR)/*.o $(DETECTIONDIR)/*.o $(UTILDIR)/*.o $(PIXELMAPDIR)/*.o $(PLOTDIR)/*.o $(LIB) $(LIBSO)
275
276cleanest: clean
277        rm -rf Makefile config.log config.status src/config.h $(EXEC)
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