source: trunk/Makefile.in @ 1280

Last change on this file since 1280 was 1261, checked in by MatthewWhiting, 11 years ago

Ticket #125 - Implementing tests for maximum number of pixels/channels/voxels. A few tweaks to remove compilation warnings.
File size: 7.5 KB
RevLine 
[1221]1CFLAGS = -O2 -ftree-vectorize -fPIC
[107]2
[794]3FFLAGS = -fast -O4
[107]4
[652]5CC =    @CC@ $(CFLAGS)
6CXX =   @CXX@ $(CFLAGS)
[110]7F77=    @F77@ $(FFLAGS)
[384]8LINK=   @LINKER@
[107]9
[108]10BASE = ./src
[107]11
[343]12INSTALLDIR = @prefix@/bin
[389]13LIBDIR = @prefix@/lib
14INCDIR = @prefix@/include/duchamp
[107]15
[338]16V = @PACKAGE_VERSION@
17EXEC = Duchamp-$(V)
18EXEC-STUB = Duchamp
[107]19
[389]20AR = ar cq
[1227]21LIB = libduchamp-$(V).a
22LIB_LN = libduchamp.a
[719]23RANLIB = ranlib
[1224]24SHAREDLIB = @SHRLD@
25#SHAREDFLAGS = -shared -Wl,-soname,@SHRLIB@
[1221]26LIBSO = @SHRLIB@
27LIBSO_LN = @SHRLN@
[389]28
[338]29INSTALL = @INSTALL@
30LN_S = @LN_S@
31
[107]32PGPLOTINC = @PGPLOTINC@
33PGPLOTLIB = @PGPLOTLIB@
34
35CFITSIOINC = @CFITSIOINC@
36CFITSIOLIB = @CFITSIOLIB@
37
38WCSINC = @WCSINC@
39WCSLIB = @WCSLIB@
40
[1114]41CINC = -I$(BASE) $(PGPLOTINC) $(WCSINC) $(CFITSIOINC)
[107]42
[938]43LIBS = $(WCSLIB) $(CFITSIOLIB) $(PGPLOTLIB)
[107]44
45ATROUSDIR = $(BASE)/ATrous
[261]46PIXELMAPDIR = $(BASE)/PixelMap
[107]47DETECTIONDIR = $(BASE)/Detection
48CUBESDIR = $(BASE)/Cubes
[165]49FITSIODIR = $(BASE)/FitsIO
[1243]50PLOTDIR = $(BASE)/Plotting
[107]51UTILDIR = $(BASE)/Utils
[1048]52OUTPUTSDIR = $(BASE)/Outputs
[148]53TESTDIR = ./verification
[107]54
[1181]55HEADS = $(BASE)/config.h\
56        $(BASE)/duchamp.hh\
[315]57        $(BASE)/pgheader.hh\
[107]58        $(BASE)/param.hh\
[272]59        $(BASE)/fitsHeader.hh\
[258]60        $(PIXELMAPDIR)/Voxel.hh\
61        $(PIXELMAPDIR)/Scan.hh\
62        $(PIXELMAPDIR)/Object2D.hh\
63        $(PIXELMAPDIR)/Object3D.hh\
[107]64        $(ATROUSDIR)/atrous.hh\
[232]65        $(ATROUSDIR)/filter.hh\
[107]66        $(DETECTIONDIR)/detection.hh\
[582]67        $(DETECTIONDIR)/finders.hh\
[750]68        $(DETECTIONDIR)/ObjectGrower.hh\
[107]69        $(CUBESDIR)/cubes.hh\
[798]70        $(FITSIODIR)/Beam.hh\
71        $(FITSIODIR)/DuchampBeam.hh\
[1125]72        $(FITSIODIR)/ReadExisting.hh\
73        $(FITSIODIR)/ReadExistingRecon.hh\
74        $(FITSIODIR)/ReadExistingSmooth.hh\
75        $(FITSIODIR)/WriteArray.hh\
76        $(FITSIODIR)/WriteBaselineArray.hh\
77        $(FITSIODIR)/WriteMaskArray.hh\
78        $(FITSIODIR)/WriteMomentMapArray.hh\
[1142]79        $(FITSIODIR)/WriteMomentMaskArray.hh\
[1125]80        $(FITSIODIR)/WriteReconArray.hh\
81        $(FITSIODIR)/WriteSmoothArray.hh\
[1243]82        $(PLOTDIR)/DuchampPlot.hh\
83        $(PLOTDIR)/MultipleDuchampPlot.hh\
84        $(PLOTDIR)/ImagePlot.hh\
85        $(PLOTDIR)/SpectralPlot.hh\
86        $(PLOTDIR)/SimpleSpectralPlot.hh\
87        $(PLOTDIR)/CutoutPlot.hh\
[275]88        $(UTILDIR)/Hanning.hh\
[638]89        $(UTILDIR)/GaussSmooth1D.hh\
90        $(UTILDIR)/GaussSmooth2D.hh\
[258]91        $(UTILDIR)/Section.hh\
[201]92        $(UTILDIR)/Statistics.hh\
[275]93        $(UTILDIR)/utils.hh\
94        $(UTILDIR)/feedback.hh\
[916]95        $(UTILDIR)/mycpgplot.hh\
96        $(UTILDIR)/VOField.hh\
[1048]97        $(UTILDIR)/VOParam.hh\
[1061]98        $(OUTPUTSDIR)/columns.hh\
99        $(OUTPUTSDIR)/CatalogueSpecification.hh\
[1048]100        $(OUTPUTSDIR)/CatalogueWriter.hh\
[1080]101        $(OUTPUTSDIR)/FileCatalogueWriter.hh\
[1048]102        $(OUTPUTSDIR)/ASCIICatalogueWriter.hh\
[1072]103        $(OUTPUTSDIR)/VOTableCatalogueWriter.hh\
104        $(OUTPUTSDIR)/AnnotationWriter.hh\
105        $(OUTPUTSDIR)/KarmaAnnotationWriter.hh\
[1126]106        $(OUTPUTSDIR)/DS9AnnotationWriter.hh\
107        $(OUTPUTSDIR)/CasaAnnotationWriter.hh
[107]108
[318]109OBJECTS-NOPG = $(BASE)/mainDuchamp.o \
[123]110        $(BASE)/duchamp.o\
[108]111        $(BASE)/param.o\
[272]112        $(BASE)/fitsHeader.o\
[258]113        $(PIXELMAPDIR)/Voxel.o\
114        $(PIXELMAPDIR)/Scan.o\
115        $(PIXELMAPDIR)/Object2D.o\
116        $(PIXELMAPDIR)/Object3D.o\
[232]117        $(ATROUSDIR)/filter.o\
[107]118        $(ATROUSDIR)/atrous_1d_reconstruct.o\
119        $(ATROUSDIR)/atrous_2d_reconstruct.o\
120        $(ATROUSDIR)/atrous_3d_reconstruct.o\
121        $(ATROUSDIR)/baselineSubtract.o\
122        $(ATROUSDIR)/ReconSearch.o\
123        $(DETECTIONDIR)/detection.o\
[750]124        $(DETECTIONDIR)/ObjectGrower.o\
[107]125        $(DETECTIONDIR)/areClose.o\
126        $(DETECTIONDIR)/lutz_detect.o\
127        $(DETECTIONDIR)/mergeIntoList.o\
128        $(DETECTIONDIR)/outputDetection.o\
129        $(DETECTIONDIR)/sorting.o\
130        $(DETECTIONDIR)/spectrumDetect.o\
131        $(CUBESDIR)/cubes.o\
[224]132        $(CUBESDIR)/cubes_extended.o\
[107]133        $(CUBESDIR)/baseline.o\
[177]134        $(CUBESDIR)/CubicSearch.o\
[107]135        $(CUBESDIR)/detectionIO.o\
[475]136        $(CUBESDIR)/existingDetections.o\
[107]137        $(CUBESDIR)/getImage.o\
138        $(CUBESDIR)/invertCube.o\
139        $(CUBESDIR)/Merger.o\
[680]140        $(CUBESDIR)/momentMap.o\
[201]141        $(CUBESDIR)/smoothCube.o\
[463]142        $(CUBESDIR)/spectraUtils.o\
[107]143        $(CUBESDIR)/trimImage.o\
[798]144        $(FITSIODIR)/Beam.o\
145        $(FITSIODIR)/DuchampBeam.o\
[1125]146        $(FITSIODIR)/ReadExisting.o\
147        $(FITSIODIR)/ReadExistingRecon.o\
148        $(FITSIODIR)/ReadExistingSmooth.o\
149        $(FITSIODIR)/WriteArray.o\
150        $(FITSIODIR)/WriteBaselineArray.o\
151        $(FITSIODIR)/WriteMaskArray.o\
152        $(FITSIODIR)/WriteMomentMapArray.o\
[1142]153        $(FITSIODIR)/WriteMomentMaskArray.o\
[1125]154        $(FITSIODIR)/WriteReconArray.o\
155        $(FITSIODIR)/WriteSmoothArray.o\
[165]156        $(FITSIODIR)/dataIO.o\
157        $(FITSIODIR)/headerIO.o\
158        $(FITSIODIR)/subsection.o\
159        $(FITSIODIR)/wcsIO.o\
[258]160        $(UTILDIR)/Section.o\
[201]161        $(UTILDIR)/Statistics.o\
[220]162        $(UTILDIR)/feedback.o\
[638]163        $(UTILDIR)/GaussSmooth1D.o\
[221]164        $(UTILDIR)/Hanning.o\
[916]165        $(UTILDIR)/VOField.o\
166        $(UTILDIR)/VOParam.o\
[107]167        $(UTILDIR)/getStats.o\
[849]168        $(UTILDIR)/getNormalStats.o\
169        $(UTILDIR)/getRobustStats.o\
[107]170        $(UTILDIR)/linear_regression.o\
[1261]171        $(UTILDIR)/medianBaseline.o\
[107]172        $(UTILDIR)/position_related.o\
173        $(UTILDIR)/sort.o\
[733]174        $(UTILDIR)/string_related.o\
[107]175        $(UTILDIR)/wcsFunctions.o\
[1048]176        $(UTILDIR)/zscale.o\
[1061]177        $(OUTPUTSDIR)/columns.o\
178        $(OUTPUTSDIR)/CatalogueSpecification.o\
[1048]179        $(OUTPUTSDIR)/CatalogueWriter.o\
[1080]180        $(OUTPUTSDIR)/FileCatalogueWriter.o\
[1048]181        $(OUTPUTSDIR)/ASCIICatalogueWriter.o\
[1072]182        $(OUTPUTSDIR)/VOTableCatalogueWriter.o\
183        $(OUTPUTSDIR)/AnnotationWriter.o\
184        $(OUTPUTSDIR)/KarmaAnnotationWriter.o\
[1126]185        $(OUTPUTSDIR)/DS9AnnotationWriter.o\
186        $(OUTPUTSDIR)/CasaAnnotationWriter.o
[107]187
[384]188ifeq ($(strip $(PGPLOTLIB)),)
[318]189  OBJECTS = $(OBJECTS-NOPG)
190else
191  OBJECTS = $(OBJECTS-NOPG)\
192        $(CUBESDIR)/drawBlankEdges.o\
193        $(CUBESDIR)/drawMomentCutout.o\
194        $(CUBESDIR)/outputSpectra.o\
195        $(CUBESDIR)/plotting.o\
[1243]196        $(PLOTDIR)/DuchampPlot.o\
197        $(PLOTDIR)/MultipleDuchampPlot.o\
198        $(PLOTDIR)/ImagePlot.o\
199        $(PLOTDIR)/SpectralPlot.o\
200        $(PLOTDIR)/SimpleSpectralPlot.o\
201        $(PLOTDIR)/CutoutPlot.o\
[332]202        $(UTILDIR)/mycpgplot.o\
[1250]203        $(UTILDIR)/PlottingUtilities.o\
[332]204        $(UTILDIR)/pgplot_related.o
[318]205endif
206
[108]207duchamp : $(OBJECTS)
[384]208        $(LINK) -o $(EXEC) $(OBJECTS) $(LIBS)
[107]209
[389]210lib     : $(OBJECTS)
211        $(AR) $(LIB) $(OBJECTS)
[719]212        $(RANLIB) $(LIB)
[1224]213        $(SHAREDLIB) $(CINC) $(LIBS) -o $(LIBSO) $(OBJECTS)
214#       $(CXX) $(SHAREDFLAGS) -o $(LIBSO) $(OBJECTS)
[389]215
[149]216createTestImage : $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o
[148]217        $(CXX) -o createTestImage.x\
[149]218        $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o\
[148]219        $(CFITSIOLIB) @LIBS@
220
[338]221install :
222        $(INSTALL) -d -m 2755 $(INSTALLDIR)
223        $(INSTALL) -m 755 $(EXEC) $(INSTALLDIR)
224        $(RM) $(INSTALLDIR)/$(EXEC-STUB)
[514]225        cd $(INSTALLDIR) && $(LN_S) $(EXEC) $(EXEC-STUB)
[432]226        -test ! -f $(LIB) || $(INSTALL) -d -m 2755 $(LIBDIR)
227        -test ! -f $(LIB) || $(INSTALL) -m 644 $(LIB) $(LIBDIR)
[1234]228        -test ! -f $(LIB) || cd $(LIBDIR) && $(RM) $(LIB_LN) && $(LN_S) $(LIB) $(LIB_LN)
[1238]229        -test ! -f $(LIBSO) || $(INSTALL) -m 755 $(LIBSO) $(LIBDIR) && \
230                if [ "@SHRLN@" != "" ] ; then \
231                        cd $(LIBDIR) && $(RM) $(LIBSO_LN) && $(LN_S) $(LIBSO) $(LIBSO_LN); \
232                fi
[389]233        $(INSTALL) -d -m 2755 $(INCDIR)
234        $(INSTALL) -m 644 $(BASE)/*.hh $(INCDIR)
[397]235        $(INSTALL) -m 644 $(BASE)/*.h $(INCDIR)
[389]236        $(INSTALL) -d -m 2755 $(INCDIR)/Cubes
237        $(INSTALL) -m 644 $(CUBESDIR)/*.hh $(INCDIR)/Cubes
238        $(INSTALL) -d -m 2755 $(INCDIR)/ATrous
239        $(INSTALL) -m 644 $(ATROUSDIR)/*.hh $(INCDIR)/ATrous
240        $(INSTALL) -d -m 2755 $(INCDIR)/Detection
241        $(INSTALL) -m 644 $(DETECTIONDIR)/*.hh $(INCDIR)/Detection
[807]242        $(INSTALL) -d -m 2755 $(INCDIR)/FitsIO
243        $(INSTALL) -m 644 $(FITSIODIR)/*.hh $(INCDIR)/FitsIO
[1243]244        $(INSTALL) -d -m 2755 $(INCDIR)/Plotting
245        $(INSTALL) -m 644 $(PLOTDIR)/*.hh $(INCDIR)/Plotting
[389]246        $(INSTALL) -d -m 2755 $(INCDIR)/PixelMap
247        $(INSTALL) -m 644 $(PIXELMAPDIR)/*.hh $(INCDIR)/PixelMap
[1068]248        $(INSTALL) -d -m 2755 $(INCDIR)/Outputs
249        $(INSTALL) -m 644 $(OUTPUTSDIR)/*.hh $(INCDIR)/Outputs
[389]250        $(INSTALL) -d -m 2755 $(INCDIR)/Utils
251        $(INSTALL) -m 644 $(UTILDIR)/*.hh $(INCDIR)/Utils
[713]252        $(INSTALL) -m 644 $(UTILDIR)/*.tcc $(INCDIR)/Utils
[338]253
[107]254$(OBJECTS) : $(HEADS)
255
256.cc.o:
257        $(CXX) -c $< $(CINC) -o $@
258
259.c.o:
260        $(CC) -c $< $(CINC) -o $@
261
262clean :
[1243]263        rm -f $(BASE)/*.o $(ATROUSDIR)/*.o $(CUBESDIR)/*.o $(FITSIODIR)/*.o $(DETECTIONDIR)/*.o $(UTILDIR)/*.o $(PIXELMAPDIR)/*.o $(PLOTDIR)/*.o $(LIB) $(LIBSO)
[1088]264
265cleanest: clean
266        rm -rf Makefile config.log config.status src/config.h $(EXEC)
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