source: trunk/Makefile.in @ 1280

Last change on this file since 1280 was 1261, checked in by MatthewWhiting, 11 years ago

Ticket #125 - Implementing tests for maximum number of pixels/channels/voxels. A few tweaks to remove compilation warnings.
File size: 7.5 KB
Line 
1CFLAGS = -O2 -ftree-vectorize -fPIC
2
3FFLAGS = -fast -O4
4
5CC =    @CC@ $(CFLAGS)
6CXX =   @CXX@ $(CFLAGS)
7F77=    @F77@ $(FFLAGS)
8LINK=   @LINKER@
9
10BASE = ./src
11
12INSTALLDIR = @prefix@/bin
13LIBDIR = @prefix@/lib
14INCDIR = @prefix@/include/duchamp
15
16V = @PACKAGE_VERSION@
17EXEC = Duchamp-$(V)
18EXEC-STUB = Duchamp
19
20AR = ar cq
21LIB = libduchamp-$(V).a
22LIB_LN = libduchamp.a
23RANLIB = ranlib
24SHAREDLIB = @SHRLD@
25#SHAREDFLAGS = -shared -Wl,-soname,@SHRLIB@
26LIBSO = @SHRLIB@
27LIBSO_LN = @SHRLN@
28
29INSTALL = @INSTALL@
30LN_S = @LN_S@
31
32PGPLOTINC = @PGPLOTINC@
33PGPLOTLIB = @PGPLOTLIB@
34
35CFITSIOINC = @CFITSIOINC@
36CFITSIOLIB = @CFITSIOLIB@
37
38WCSINC = @WCSINC@
39WCSLIB = @WCSLIB@
40
41CINC = -I$(BASE) $(PGPLOTINC) $(WCSINC) $(CFITSIOINC)
42
43LIBS = $(WCSLIB) $(CFITSIOLIB) $(PGPLOTLIB)
44
45ATROUSDIR = $(BASE)/ATrous
46PIXELMAPDIR = $(BASE)/PixelMap
47DETECTIONDIR = $(BASE)/Detection
48CUBESDIR = $(BASE)/Cubes
49FITSIODIR = $(BASE)/FitsIO
50PLOTDIR = $(BASE)/Plotting
51UTILDIR = $(BASE)/Utils
52OUTPUTSDIR = $(BASE)/Outputs
53TESTDIR = ./verification
54
55HEADS = $(BASE)/config.h\
56        $(BASE)/duchamp.hh\
57        $(BASE)/pgheader.hh\
58        $(BASE)/param.hh\
59        $(BASE)/fitsHeader.hh\
60        $(PIXELMAPDIR)/Voxel.hh\
61        $(PIXELMAPDIR)/Scan.hh\
62        $(PIXELMAPDIR)/Object2D.hh\
63        $(PIXELMAPDIR)/Object3D.hh\
64        $(ATROUSDIR)/atrous.hh\
65        $(ATROUSDIR)/filter.hh\
66        $(DETECTIONDIR)/detection.hh\
67        $(DETECTIONDIR)/finders.hh\
68        $(DETECTIONDIR)/ObjectGrower.hh\
69        $(CUBESDIR)/cubes.hh\
70        $(FITSIODIR)/Beam.hh\
71        $(FITSIODIR)/DuchampBeam.hh\
72        $(FITSIODIR)/ReadExisting.hh\
73        $(FITSIODIR)/ReadExistingRecon.hh\
74        $(FITSIODIR)/ReadExistingSmooth.hh\
75        $(FITSIODIR)/WriteArray.hh\
76        $(FITSIODIR)/WriteBaselineArray.hh\
77        $(FITSIODIR)/WriteMaskArray.hh\
78        $(FITSIODIR)/WriteMomentMapArray.hh\
79        $(FITSIODIR)/WriteMomentMaskArray.hh\
80        $(FITSIODIR)/WriteReconArray.hh\
81        $(FITSIODIR)/WriteSmoothArray.hh\
82        $(PLOTDIR)/DuchampPlot.hh\
83        $(PLOTDIR)/MultipleDuchampPlot.hh\
84        $(PLOTDIR)/ImagePlot.hh\
85        $(PLOTDIR)/SpectralPlot.hh\
86        $(PLOTDIR)/SimpleSpectralPlot.hh\
87        $(PLOTDIR)/CutoutPlot.hh\
88        $(UTILDIR)/Hanning.hh\
89        $(UTILDIR)/GaussSmooth1D.hh\
90        $(UTILDIR)/GaussSmooth2D.hh\
91        $(UTILDIR)/Section.hh\
92        $(UTILDIR)/Statistics.hh\
93        $(UTILDIR)/utils.hh\
94        $(UTILDIR)/feedback.hh\
95        $(UTILDIR)/mycpgplot.hh\
96        $(UTILDIR)/VOField.hh\
97        $(UTILDIR)/VOParam.hh\
98        $(OUTPUTSDIR)/columns.hh\
99        $(OUTPUTSDIR)/CatalogueSpecification.hh\
100        $(OUTPUTSDIR)/CatalogueWriter.hh\
101        $(OUTPUTSDIR)/FileCatalogueWriter.hh\
102        $(OUTPUTSDIR)/ASCIICatalogueWriter.hh\
103        $(OUTPUTSDIR)/VOTableCatalogueWriter.hh\
104        $(OUTPUTSDIR)/AnnotationWriter.hh\
105        $(OUTPUTSDIR)/KarmaAnnotationWriter.hh\
106        $(OUTPUTSDIR)/DS9AnnotationWriter.hh\
107        $(OUTPUTSDIR)/CasaAnnotationWriter.hh
108
109OBJECTS-NOPG = $(BASE)/mainDuchamp.o \
110        $(BASE)/duchamp.o\
111        $(BASE)/param.o\
112        $(BASE)/fitsHeader.o\
113        $(PIXELMAPDIR)/Voxel.o\
114        $(PIXELMAPDIR)/Scan.o\
115        $(PIXELMAPDIR)/Object2D.o\
116        $(PIXELMAPDIR)/Object3D.o\
117        $(ATROUSDIR)/filter.o\
118        $(ATROUSDIR)/atrous_1d_reconstruct.o\
119        $(ATROUSDIR)/atrous_2d_reconstruct.o\
120        $(ATROUSDIR)/atrous_3d_reconstruct.o\
121        $(ATROUSDIR)/baselineSubtract.o\
122        $(ATROUSDIR)/ReconSearch.o\
123        $(DETECTIONDIR)/detection.o\
124        $(DETECTIONDIR)/ObjectGrower.o\
125        $(DETECTIONDIR)/areClose.o\
126        $(DETECTIONDIR)/lutz_detect.o\
127        $(DETECTIONDIR)/mergeIntoList.o\
128        $(DETECTIONDIR)/outputDetection.o\
129        $(DETECTIONDIR)/sorting.o\
130        $(DETECTIONDIR)/spectrumDetect.o\
131        $(CUBESDIR)/cubes.o\
132        $(CUBESDIR)/cubes_extended.o\
133        $(CUBESDIR)/baseline.o\
134        $(CUBESDIR)/CubicSearch.o\
135        $(CUBESDIR)/detectionIO.o\
136        $(CUBESDIR)/existingDetections.o\
137        $(CUBESDIR)/getImage.o\
138        $(CUBESDIR)/invertCube.o\
139        $(CUBESDIR)/Merger.o\
140        $(CUBESDIR)/momentMap.o\
141        $(CUBESDIR)/smoothCube.o\
142        $(CUBESDIR)/spectraUtils.o\
143        $(CUBESDIR)/trimImage.o\
144        $(FITSIODIR)/Beam.o\
145        $(FITSIODIR)/DuchampBeam.o\
146        $(FITSIODIR)/ReadExisting.o\
147        $(FITSIODIR)/ReadExistingRecon.o\
148        $(FITSIODIR)/ReadExistingSmooth.o\
149        $(FITSIODIR)/WriteArray.o\
150        $(FITSIODIR)/WriteBaselineArray.o\
151        $(FITSIODIR)/WriteMaskArray.o\
152        $(FITSIODIR)/WriteMomentMapArray.o\
153        $(FITSIODIR)/WriteMomentMaskArray.o\
154        $(FITSIODIR)/WriteReconArray.o\
155        $(FITSIODIR)/WriteSmoothArray.o\
156        $(FITSIODIR)/dataIO.o\
157        $(FITSIODIR)/headerIO.o\
158        $(FITSIODIR)/subsection.o\
159        $(FITSIODIR)/wcsIO.o\
160        $(UTILDIR)/Section.o\
161        $(UTILDIR)/Statistics.o\
162        $(UTILDIR)/feedback.o\
163        $(UTILDIR)/GaussSmooth1D.o\
164        $(UTILDIR)/Hanning.o\
165        $(UTILDIR)/VOField.o\
166        $(UTILDIR)/VOParam.o\
167        $(UTILDIR)/getStats.o\
168        $(UTILDIR)/getNormalStats.o\
169        $(UTILDIR)/getRobustStats.o\
170        $(UTILDIR)/linear_regression.o\
171        $(UTILDIR)/medianBaseline.o\
172        $(UTILDIR)/position_related.o\
173        $(UTILDIR)/sort.o\
174        $(UTILDIR)/string_related.o\
175        $(UTILDIR)/wcsFunctions.o\
176        $(UTILDIR)/zscale.o\
177        $(OUTPUTSDIR)/columns.o\
178        $(OUTPUTSDIR)/CatalogueSpecification.o\
179        $(OUTPUTSDIR)/CatalogueWriter.o\
180        $(OUTPUTSDIR)/FileCatalogueWriter.o\
181        $(OUTPUTSDIR)/ASCIICatalogueWriter.o\
182        $(OUTPUTSDIR)/VOTableCatalogueWriter.o\
183        $(OUTPUTSDIR)/AnnotationWriter.o\
184        $(OUTPUTSDIR)/KarmaAnnotationWriter.o\
185        $(OUTPUTSDIR)/DS9AnnotationWriter.o\
186        $(OUTPUTSDIR)/CasaAnnotationWriter.o
187
188ifeq ($(strip $(PGPLOTLIB)),)
189  OBJECTS = $(OBJECTS-NOPG)
190else
191  OBJECTS = $(OBJECTS-NOPG)\
192        $(CUBESDIR)/drawBlankEdges.o\
193        $(CUBESDIR)/drawMomentCutout.o\
194        $(CUBESDIR)/outputSpectra.o\
195        $(CUBESDIR)/plotting.o\
196        $(PLOTDIR)/DuchampPlot.o\
197        $(PLOTDIR)/MultipleDuchampPlot.o\
198        $(PLOTDIR)/ImagePlot.o\
199        $(PLOTDIR)/SpectralPlot.o\
200        $(PLOTDIR)/SimpleSpectralPlot.o\
201        $(PLOTDIR)/CutoutPlot.o\
202        $(UTILDIR)/mycpgplot.o\
203        $(UTILDIR)/PlottingUtilities.o\
204        $(UTILDIR)/pgplot_related.o
205endif
206
207duchamp : $(OBJECTS)
208        $(LINK) -o $(EXEC) $(OBJECTS) $(LIBS)
209
210lib     : $(OBJECTS)
211        $(AR) $(LIB) $(OBJECTS)
212        $(RANLIB) $(LIB)
213        $(SHAREDLIB) $(CINC) $(LIBS) -o $(LIBSO) $(OBJECTS)
214#       $(CXX) $(SHAREDFLAGS) -o $(LIBSO) $(OBJECTS)
215
216createTestImage : $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o
217        $(CXX) -o createTestImage.x\
218        $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o\
219        $(CFITSIOLIB) @LIBS@
220
221install :
222        $(INSTALL) -d -m 2755 $(INSTALLDIR)
223        $(INSTALL) -m 755 $(EXEC) $(INSTALLDIR)
224        $(RM) $(INSTALLDIR)/$(EXEC-STUB)
225        cd $(INSTALLDIR) && $(LN_S) $(EXEC) $(EXEC-STUB)
226        -test ! -f $(LIB) || $(INSTALL) -d -m 2755 $(LIBDIR)
227        -test ! -f $(LIB) || $(INSTALL) -m 644 $(LIB) $(LIBDIR)
228        -test ! -f $(LIB) || cd $(LIBDIR) && $(RM) $(LIB_LN) && $(LN_S) $(LIB) $(LIB_LN)
229        -test ! -f $(LIBSO) || $(INSTALL) -m 755 $(LIBSO) $(LIBDIR) && \
230                if [ "@SHRLN@" != "" ] ; then \
231                        cd $(LIBDIR) && $(RM) $(LIBSO_LN) && $(LN_S) $(LIBSO) $(LIBSO_LN); \
232                fi
233        $(INSTALL) -d -m 2755 $(INCDIR)
234        $(INSTALL) -m 644 $(BASE)/*.hh $(INCDIR)
235        $(INSTALL) -m 644 $(BASE)/*.h $(INCDIR)
236        $(INSTALL) -d -m 2755 $(INCDIR)/Cubes
237        $(INSTALL) -m 644 $(CUBESDIR)/*.hh $(INCDIR)/Cubes
238        $(INSTALL) -d -m 2755 $(INCDIR)/ATrous
239        $(INSTALL) -m 644 $(ATROUSDIR)/*.hh $(INCDIR)/ATrous
240        $(INSTALL) -d -m 2755 $(INCDIR)/Detection
241        $(INSTALL) -m 644 $(DETECTIONDIR)/*.hh $(INCDIR)/Detection
242        $(INSTALL) -d -m 2755 $(INCDIR)/FitsIO
243        $(INSTALL) -m 644 $(FITSIODIR)/*.hh $(INCDIR)/FitsIO
244        $(INSTALL) -d -m 2755 $(INCDIR)/Plotting
245        $(INSTALL) -m 644 $(PLOTDIR)/*.hh $(INCDIR)/Plotting
246        $(INSTALL) -d -m 2755 $(INCDIR)/PixelMap
247        $(INSTALL) -m 644 $(PIXELMAPDIR)/*.hh $(INCDIR)/PixelMap
248        $(INSTALL) -d -m 2755 $(INCDIR)/Outputs
249        $(INSTALL) -m 644 $(OUTPUTSDIR)/*.hh $(INCDIR)/Outputs
250        $(INSTALL) -d -m 2755 $(INCDIR)/Utils
251        $(INSTALL) -m 644 $(UTILDIR)/*.hh $(INCDIR)/Utils
252        $(INSTALL) -m 644 $(UTILDIR)/*.tcc $(INCDIR)/Utils
253
254$(OBJECTS) : $(HEADS)
255
256.cc.o:
257        $(CXX) -c $< $(CINC) -o $@
258
259.c.o:
260        $(CC) -c $< $(CINC) -o $@
261
262clean :
263        rm -f $(BASE)/*.o $(ATROUSDIR)/*.o $(CUBESDIR)/*.o $(FITSIODIR)/*.o $(DETECTIONDIR)/*.o $(UTILDIR)/*.o $(PIXELMAPDIR)/*.o $(PLOTDIR)/*.o $(LIB) $(LIBSO)
264
265cleanest: clean
266        rm -rf Makefile config.log config.status src/config.h $(EXEC)
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