[3] | 1 | #include <iostream> |
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| 2 | #include <sstream> |
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| 3 | #include <string> |
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| 4 | #include <wcs.h> |
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| 5 | #include <wcshdr.h> |
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[65] | 6 | #include <fitsio.h> |
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[3] | 7 | #include <Cubes/cubes.hh> |
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| 8 | |
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| 9 | void Cube::saveReconstructedCube() |
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| 10 | { |
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| 11 | |
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| 12 | float *resid = new float[this->numPixels]; |
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| 13 | for(int i=0;i<this->numPixels;i++) resid[i] = this->array[i] - this->recon[i]; |
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| 14 | float blankval = this->par.getBlankPixVal(); |
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| 15 | |
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| 16 | short int maxdim=3; |
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| 17 | long *fpixel = new long[maxdim]; |
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| 18 | for(int i=0;i<maxdim;i++) fpixel[i]=1; |
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| 19 | long *dimAxes = new long[maxdim]; |
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| 20 | for(int i=0;i<maxdim;i++) dimAxes[i]=1; |
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| 21 | long nelements; |
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| 22 | int bitpix,numAxes,anynul; |
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| 23 | int status = 0, nkeys, ct=1; /* MUST initialize status */ |
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| 24 | fitsfile *fptrOld, *fptrNew; |
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| 25 | fits_open_file(&fptrOld,this->par.getImageFile().c_str(),READONLY,&status); |
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| 26 | if (status) fits_report_error(stderr, status); |
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| 27 | |
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| 28 | if(this->par.getFlagOutputRecon()){ |
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| 29 | string fileout1 = this->par.getImageFile(); |
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| 30 | fileout1 = fileout1.substr(0,fileout1.size()-5); // remove the ".fits" on the end. |
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| 31 | std::stringstream ss1; |
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| 32 | ss1 << ".RECON"<<this->par.getAtrousCut()<<".fits"; |
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| 33 | fileout1 += ss1.str(); |
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| 34 | string syscall = "rm -f " + fileout1; |
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| 35 | system(syscall.c_str()); |
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| 36 | |
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| 37 | status = 0; |
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| 38 | fits_create_file(&fptrNew,fileout1.c_str(),&status); |
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| 39 | if (status) fits_report_error(stderr, status); |
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| 40 | status = 0; |
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| 41 | fits_movabs_hdu(fptrOld, 1, NULL, &status); |
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| 42 | if (status) fits_report_error(stderr, status); |
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| 43 | status = 0; |
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| 44 | fits_copy_hdu(fptrOld, fptrNew, 0, &status); |
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| 45 | if (status) fits_report_error(stderr, status); |
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| 46 | ////////////////////////////// |
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| 47 | ////// NEED TO ADD NEW HEADER KEYS |
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| 48 | ////// INDICATING WHAT THE FILE IS... |
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| 49 | ////////////////////////////// |
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| 50 | |
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| 51 | if(this->par.getFlagBlankPix()) |
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| 52 | fits_write_pixnull(fptrNew, TFLOAT, fpixel, this->numPixels, recon, &blankval, &status); |
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| 53 | else fits_write_pix(fptrNew, TFLOAT, fpixel, this->numPixels, recon, &status); |
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| 54 | |
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| 55 | fits_close_file(fptrNew, &status); |
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| 56 | } |
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| 57 | |
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| 58 | if(this->par.getFlagOutputResid()){ |
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| 59 | string fileout2 = this->par.getImageFile(); |
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| 60 | fileout2 = fileout2.substr(0,fileout2.size()-5); |
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| 61 | std::stringstream ss2; |
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| 62 | ss2 << ".RESID"<<this->par.getAtrousCut()<<".fits"; |
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| 63 | fileout2 += ss2.str(); |
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| 64 | string syscall = "rm -f " + fileout2; |
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| 65 | system(syscall.c_str()); |
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| 66 | |
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| 67 | status = 0; |
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| 68 | fits_create_file(&fptrNew,fileout2.c_str(),&status); |
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| 69 | if (status) fits_report_error(stderr, status); |
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| 70 | status = 0; |
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| 71 | fits_movabs_hdu(fptrOld, 1, NULL, &status); |
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| 72 | if (status) fits_report_error(stderr, status); |
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| 73 | status = 0; |
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| 74 | fits_copy_hdu(fptrOld, fptrNew, 0, &status); |
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| 75 | if (status) fits_report_error(stderr, status); |
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| 76 | ////////////////////////////// |
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| 77 | ////// NEED TO ADD NEW HEADER KEYS |
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| 78 | ////// INDICATING WHAT THE FILE IS... |
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| 79 | ////////////////////////////// |
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| 80 | |
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| 81 | if(this->par.getFlagBlankPix()) |
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| 82 | fits_write_pixnull(fptrNew, TFLOAT, fpixel, this->numPixels, resid, &blankval, &status); |
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| 83 | else fits_write_pix(fptrNew, TFLOAT, fpixel, this->numPixels, resid, &status); |
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| 84 | |
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| 85 | fits_close_file(fptrNew, &status); |
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| 86 | } |
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| 87 | |
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| 88 | delete [] recon; |
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| 89 | delete [] resid; |
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| 90 | delete [] fpixel; |
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| 91 | delete [] dimAxes; |
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| 92 | |
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| 93 | } |
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