1 | #include <iostream> |
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2 | #include <sstream> |
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3 | #include <string> |
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4 | #include <wcs.h> |
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5 | #include <wcshdr.h> |
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6 | #include <fitsio.h> |
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7 | #include <Cubes/cubes.hh> |
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8 | |
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9 | void Cube::saveReconstructedCube() |
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10 | { |
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11 | |
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12 | float *resid = new float[this->numPixels]; |
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13 | for(int i=0;i<this->numPixels;i++) resid[i] = this->array[i] - this->recon[i]; |
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14 | float blankval = this->par.getBlankPixVal(); |
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15 | |
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16 | short int maxdim=3; |
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17 | long *fpixel = new long[maxdim]; |
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18 | for(int i=0;i<maxdim;i++) fpixel[i]=1; |
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19 | long *dimAxes = new long[maxdim]; |
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20 | for(int i=0;i<maxdim;i++) dimAxes[i]=1; |
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21 | long nelements; |
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22 | int bitpix,numAxes,anynul; |
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23 | int status = 0, nkeys, ct=1; /* MUST initialize status */ |
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24 | fitsfile *fptrOld, *fptrNew; |
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25 | fits_open_file(&fptrOld,this->par.getImageFile().c_str(),READONLY,&status); |
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26 | if (status) fits_report_error(stderr, status); |
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27 | |
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28 | if(this->par.getFlagOutputRecon()){ |
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29 | string fileout1 = this->par.getImageFile(); |
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30 | fileout1 = fileout1.substr(0,fileout1.size()-5); // remove the ".fits" on the end. |
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31 | std::stringstream ss1; |
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32 | ss1 << ".RECON"<<this->par.getAtrousCut()<<".fits"; |
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33 | fileout1 += ss1.str(); |
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34 | string syscall = "rm -f " + fileout1; |
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35 | system(syscall.c_str()); |
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36 | |
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37 | status = 0; |
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38 | fits_create_file(&fptrNew,fileout1.c_str(),&status); |
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39 | if (status) fits_report_error(stderr, status); |
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40 | status = 0; |
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41 | fits_movabs_hdu(fptrOld, 1, NULL, &status); |
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42 | if (status) fits_report_error(stderr, status); |
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43 | status = 0; |
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44 | fits_copy_hdu(fptrOld, fptrNew, 0, &status); |
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45 | if (status) fits_report_error(stderr, status); |
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46 | ////////////////////////////// |
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47 | ////// NEED TO ADD NEW HEADER KEYS |
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48 | ////// INDICATING WHAT THE FILE IS... |
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49 | ////////////////////////////// |
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50 | |
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51 | if(this->par.getFlagBlankPix()) |
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52 | fits_write_pixnull(fptrNew, TFLOAT, fpixel, this->numPixels, recon, &blankval, &status); |
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53 | else fits_write_pix(fptrNew, TFLOAT, fpixel, this->numPixels, recon, &status); |
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54 | |
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55 | fits_close_file(fptrNew, &status); |
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56 | } |
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57 | |
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58 | if(this->par.getFlagOutputResid()){ |
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59 | string fileout2 = this->par.getImageFile(); |
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60 | fileout2 = fileout2.substr(0,fileout2.size()-5); |
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61 | std::stringstream ss2; |
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62 | ss2 << ".RESID"<<this->par.getAtrousCut()<<".fits"; |
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63 | fileout2 += ss2.str(); |
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64 | string syscall = "rm -f " + fileout2; |
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65 | system(syscall.c_str()); |
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66 | |
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67 | status = 0; |
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68 | fits_create_file(&fptrNew,fileout2.c_str(),&status); |
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69 | if (status) fits_report_error(stderr, status); |
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70 | status = 0; |
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71 | fits_movabs_hdu(fptrOld, 1, NULL, &status); |
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72 | if (status) fits_report_error(stderr, status); |
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73 | status = 0; |
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74 | fits_copy_hdu(fptrOld, fptrNew, 0, &status); |
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75 | if (status) fits_report_error(stderr, status); |
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76 | ////////////////////////////// |
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77 | ////// NEED TO ADD NEW HEADER KEYS |
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78 | ////// INDICATING WHAT THE FILE IS... |
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79 | ////////////////////////////// |
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80 | |
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81 | if(this->par.getFlagBlankPix()) |
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82 | fits_write_pixnull(fptrNew, TFLOAT, fpixel, this->numPixels, resid, &blankval, &status); |
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83 | else fits_write_pix(fptrNew, TFLOAT, fpixel, this->numPixels, resid, &status); |
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84 | |
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85 | fits_close_file(fptrNew, &status); |
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86 | } |
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87 | |
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88 | delete [] recon; |
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89 | delete [] resid; |
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90 | delete [] fpixel; |
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91 | delete [] dimAxes; |
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92 | |
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93 | } |
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