| [1826] | 1 | from asap.parameters import rcParams
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| 2 | from asap.utils import _n_bools, mask_and, mask_or
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| [1460] | 3 | from asap.scantable import scantable
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| [2108] | 4 | from asap.logging import asaplog, asaplog_post_dec
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| [1460] | 5 |
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| 6 | class interactivemask:
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| [2109] | 7 | """
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| 8 | The class for interactive mask selection.
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| [1460] | 9 |
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| [2109] | 10 | Example:
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| 11 | my_mask=interactivemask(plotter,scan)
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| 12 | my_mask.set_basemask(masklist=[[0,10],[90,100]],invert=False)
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| 13 | # Do interactive mask selection
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| 14 | my_mask.select_mask()
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| 15 | finish=raw_input('Press return to finish selection.\n')
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| 16 | my_mask.finish_selection(callback=func)
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| 17 | mask=my_mask.get_mask()
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| [1826] | 18 |
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| [2109] | 19 | Modify mask region by selecting a region on a plot with mouse.
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| 20 | """
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| [1460] | 21 |
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| [2109] | 22 | def __init__(self,plotter=None, scan=None):
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| 23 | """
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| 24 | Create a interactive masking object.
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| 25 | Either or both 'plotter' or/and 'scan' should be defined.
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| [1621] | 26 |
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| [2109] | 27 | Parameters:
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| 28 | plotter: an ASAP plotter object for interactive selection
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| 29 | scan: a scantable to create a mask interactively
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| 30 | """
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| 31 | # Return if GUI is not active
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| 32 | if not rcParams['plotter.gui']:
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| 33 | msg = 'GUI plotter is disabled.\n'
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| 34 | msg += 'Exit interactive mode.'
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| 35 | asaplog.push(msg)
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| 36 | asaplog.post("ERROR")
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| 37 | return
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| 38 | # Verify input parameters
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| 39 | if scan is None and plotter is None:
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| 40 | msg = "Either scantable or plotter should be defined."
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| 41 | raise TypeError(msg)
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| [1621] | 42 |
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| [2117] | 43 | self.scan = None
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| 44 | self.p = None
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| 45 | self.newplot = False
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| [2109] | 46 | if scan and isinstance(scan, scantable):
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| [2117] | 47 | self.scan = scan
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| [2109] | 48 | from asap.asapplotter import asapplotter
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| 49 | if plotter and isinstance(plotter,asapplotter):
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| 50 | self.p = plotter
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| 51 | if self.scan is None and isinstance(self.p._data,scantable):
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| [2117] | 52 | self.scan = self.p._data
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| [2109] | 53 | if self.scan is None:
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| 54 | msg = "Invalid scantable."
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| 55 | raise TypeError(msg)
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| [1621] | 56 |
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| [2427] | 57 | self.mask = _n_bools(self.scan.nchan(self.scan.getif(0)),True)
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| [2117] | 58 | self.callback = None
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| 59 | self.event = None
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| 60 | self.once = False
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| 61 | self.showmask = True
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| 62 | self.rect = {}
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| 63 | self.xold = None
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| 64 | self.yold = None
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| 65 | self.xdataold = None
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| 66 | self.ydataold = None
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| 67 | self._polygons = []
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| [1621] | 68 |
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| [1826] | 69 |
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| [2109] | 70 | def set_basemask(self,masklist=[],invert=False):
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| 71 | """
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| 72 | Set initial channel mask.
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| [1826] | 73 |
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| [2109] | 74 | Parameters:
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| 75 | masklist: [[min, max], [min2, max2], ...]
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| 76 | A list of pairs of start/end points (inclusive)
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| 77 | specifying the regions to be masked
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| 78 | invert: optional argument. If specified as True,
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| 79 | return an inverted mask, i.e. the regions
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| 80 | specified are excluded
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| 81 | You can reset the mask selection by running this method with
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| 82 | the default parameters.
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| 83 | """
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| 84 | # Verify input parameters
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| 85 | if not (isinstance(masklist, list) or isinstance(masklist, tuple)) \
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| 86 | or not isinstance(invert, bool):
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| 87 | msg = 'Invalid mask definition'
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| 88 | raise TypeError(msg)
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| [1460] | 89 |
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| [2109] | 90 | # Create base mask
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| 91 | if ( len(masklist) > 0 ):
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| [2117] | 92 | self.mask = self.scan.create_mask(masklist,invert=invert)
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| 93 | elif invert == True:
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| [2427] | 94 | self.mask = _n_bools(self.scan.nchan(self.scan.getif(0)),False)
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| [2109] | 95 | else:
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| [2427] | 96 | self.mask = _n_bools(self.scan.nchan(self.scan.getif(0)),True)
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| [1460] | 97 |
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| [1621] | 98 |
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| [2109] | 99 | def set_startevent(self,event):
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| 100 | """
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| 101 | Inherit an event from the parent function.
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| [1826] | 102 |
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| [2109] | 103 | Parameters:
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| 104 | event: 'button_press_event' object to be inherited to
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| 105 | start interactive region selection .
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| 106 | """
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| 107 | from matplotlib.backend_bases import MouseEvent
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| [2117] | 108 | if isinstance(event,MouseEvent) and event.name == 'button_press_event':
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| 109 | self.event = event
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| [2109] | 110 | else:
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| [2117] | 111 | msg = "Invalid event."
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| [2109] | 112 | raise TypeError(msg)
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| [1621] | 113 |
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| [2109] | 114 | def set_callback(self,callback):
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| 115 | """
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| 116 | Set callback function to run when finish_selection() is executed.
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| 117 | callback: The post processing function to run after
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| 118 | the mask selections are completed.
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| 119 | This will be overwritten if callback is defined in
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| 120 | finish_selection(callback=func)
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| 121 | """
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| [2117] | 122 | self.callback = callback
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| [1621] | 123 |
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| [2109] | 124 | def select_mask(self,once=False,showmask=True):
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| 125 | """
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| 126 | Do interactive mask selection.
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| 127 | Modify masks interactively by adding/deleting regions with
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| 128 | mouse drawing.(left-button: mask; right-button: UNmask)
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| 129 | Note that the interactive region selection is available only
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| 130 | when GUI plotter is active.
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| [1621] | 131 |
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| [2109] | 132 | Parameters:
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| 133 | once: If specified as True, you can modify masks only
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| 134 | once. Else if False, you can modify them repeatedly.
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| 135 | showmask: If specified as True, the masked regions are plotted
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| 136 | on the plotter.
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| 137 | Note this parameter is valid only when once=True.
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| 138 | Otherwise, maskes are forced to be plotted for reference.
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| 139 | """
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| 140 | # Return if GUI is not active
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| 141 | if not rcParams['plotter.gui']:
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| 142 | msg = 'GUI plotter is disabled.\n'
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| 143 | msg += 'Exit interactive mode.'
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| 144 | asaplog.push(msg)
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| 145 | asaplog.post("ERROR")
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| 146 | return
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| [1460] | 147 |
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| [2109] | 148 | self.once = once
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| 149 | if self.once:
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| [2117] | 150 | self.showmask = showmask
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| [2109] | 151 | else:
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| 152 | if not showmask:
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| 153 | asaplog.post()
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| 154 | asaplog.push('showmask spcification is ignored. Mask regions are plotted anyway.')
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| 155 | asaplog.post("WARN")
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| [2117] | 156 | self.showmask = True
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| [1621] | 157 |
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| [2109] | 158 | #if not self.p._plotter or self.p._plotter.is_dead:
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| 159 | if not self.p or self.p._plotter.is_dead:
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| 160 | asaplog.push('A new ASAP plotter will be loaded')
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| 161 | asaplog.post()
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| 162 | from asap.asapplotter import asapplotter
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| [2117] | 163 | self.p = asapplotter()
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| 164 | self.newplot = True
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| [1460] | 165 |
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| [2109] | 166 | # Plot selected spectra if needed
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| 167 | if self.scan != self.p._data:
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| 168 | if len(self.scan.getifnos()) > 16:
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| 169 | asaplog.post()
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| 170 | asaplog.push("Number of panels > 16. Plotting the first 16...")
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| 171 | asaplog.post("WARN")
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| 172 | # Need replot
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| 173 | self.p._plotter.legend(1)
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| 174 | self.p.plot(self.scan)
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| 175 | # disable casa toolbar
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| 176 | if self.p._plotter.figmgr.casabar:
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| 177 | self.p._plotter.figmgr.casabar.disable_button()
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| 178 | self.p._plotter.figmgr.casabar.disable_prev()
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| 179 | self.p._plotter.figmgr.casabar.disable_next()
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| 180 | for panel in self.p._plotter.subplots:
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| 181 | xmin, xmax = panel['axes'].get_xlim()
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| 182 | marg = 0.05*abs(xmax-xmin)
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| 183 | panel['axes'].set_xlim(xmin-marg, xmax+marg)
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| 184 | if rcParams['plotter.ganged']: break
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| 185 | self.p._plotter.show()
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| [1460] | 186 |
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| [2109] | 187 | # Plot initial mask region
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| 188 | #if self.showmask or not self.once:
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| 189 | if self.showmask:
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| 190 | self._plot_mask()
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| 191 | print ''
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| 192 | print 'Selected regions are shaded with yellow. (gray: projections)'
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| 193 | print 'Now you can modify the selection.'
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| 194 | print 'Draw rectangles with Left-mouse to add the regions,'
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| 195 | print 'or with Right-mouse to exclude the regions.'
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| [1460] | 196 |
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| [1621] | 197 |
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| [2109] | 198 | if self.event != None:
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| 199 | self._region_start(self.event)
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| 200 | else:
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| 201 | self.p._plotter.register('button_press',None)
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| 202 | self.p._plotter.register('button_press',self._region_start)
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| [1621] | 203 |
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| 204 |
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| [2109] | 205 | def _region_start(self,event):
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| 206 | # Do not fire event when in zooming/panning mode
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| 207 | mode = self.p._plotter.figmgr.toolbar.mode
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| [2117] | 208 | if not mode == '':
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| [2109] | 209 | return
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| 210 | # Return if selected point is out of panel
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| 211 | if event.inaxes == None: return
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| 212 | # Select mask/unmask region with mask
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| 213 | self.rect = {'button': event.button, 'axes': event.inaxes,
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| 214 | 'x': event.x, 'y': event.y,
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| 215 | 'world': [event.xdata, event.ydata,
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| 216 | event.xdata, event.ydata],
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| 217 | 'pixel': [event.x, event.y,
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| 218 | event.x, event.y]}
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| 219 | self.p._plotter.register('motion_notify', self._region_draw)
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| 220 | self.p._plotter.register('button_release', self._region_end)
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| [1460] | 221 |
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| [2109] | 222 | def _region_draw(self,event):
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| 223 | sameaxes=(event.inaxes == self.rect['axes'])
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| 224 | if sameaxes:
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| [2117] | 225 | xnow = event.x
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| 226 | ynow = event.y
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| 227 | self.xold = xnow
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| 228 | self.yold = ynow
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| 229 | self.xdataold = event.xdata
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| 230 | self.ydataold = event.ydata
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| [2109] | 231 | else:
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| [2117] | 232 | xnow = self.xold
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| 233 | ynow = self.yold
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| [1460] | 234 |
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| [2109] | 235 | self.p._plotter.figmgr.toolbar.draw_rubberband(event, xnow, ynow, self.rect['x'], self.rect['y'])
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| [1621] | 236 |
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| [2109] | 237 | def _region_end(self,event):
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| 238 | self.p._plotter.register('motion_notify', None)
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| 239 | self.p._plotter.register('button_release', None)
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| [1621] | 240 |
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| [2109] | 241 | # Delete the rubber band
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| 242 | self.p._plotter.figmgr.toolbar.release(event)
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| [1826] | 243 |
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| [2109] | 244 | if event.inaxes == self.rect['axes']:
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| [2117] | 245 | xend = event.x
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| 246 | yend = event.y
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| 247 | xdataend = event.xdata
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| 248 | ydataend = event.ydata
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| [2109] | 249 | else:
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| [2117] | 250 | xend = self.xold
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| 251 | yend = self.yold
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| 252 | xdataend = self.xdataold
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| 253 | ydataend = self.ydataold
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| [1826] | 254 |
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| [2109] | 255 | self.rect['world'][2:4] = [xdataend, ydataend]
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| 256 | self.rect['pixel'][2:4] = [xend, yend]
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| 257 | self._update_mask()
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| 258 | # Clear up region selection
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| [2117] | 259 | self.rect = {}
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| 260 | self.xold = None
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| 261 | self.yold = None
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| 262 | self.xdataold = None
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| 263 | self.ydataold = None
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| [2109] | 264 | if self.once: self.finish_selection(callback=self.callback)
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| [1460] | 265 |
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| [2109] | 266 | def _update_mask(self):
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| 267 | # Min and Max for new mask
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| [2117] | 268 | xstart = self.rect['world'][0]
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| 269 | xend = self.rect['world'][2]
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| [2109] | 270 | if xstart <= xend: newlist=[xstart,xend]
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| [2117] | 271 | else: newlist = [xend,xstart]
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| [2109] | 272 | # Mask or unmask
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| [2117] | 273 | invmask = None
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| [2109] | 274 | if self.rect['button'] == 1:
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| [2117] | 275 | invmask = False
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| 276 | mflg = 'Mask'
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| [2109] | 277 | elif self.rect['button'] == 3:
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| [2117] | 278 | invmask = True
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| 279 | mflg = 'UNmask'
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| [2109] | 280 | asaplog.push(mflg+': '+str(newlist))
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| 281 | asaplog.post()
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| [2117] | 282 | newmask = self.scan.create_mask(newlist,invert=invmask)
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| [2109] | 283 | # Logic operation to update mask
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| 284 | if invmask:
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| [2117] | 285 | self.mask = mask_and(self.mask,newmask)
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| [2109] | 286 | else:
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| [2117] | 287 | self.mask = mask_or(self.mask,newmask)
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| [2109] | 288 | # Plot masked regions
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| 289 | #if self.showmask or not self.once: self._plot_mask()
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| 290 | if self.showmask: self._plot_mask()
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| [1460] | 291 |
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| [2109] | 292 | # Plot masked regions
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| 293 | def _plot_mask(self):
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| 294 | msks = []
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| 295 | msks = self.scan.get_masklist(self.mask,row=0)
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| 296 | # Get projection masks for multi-IF
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| [2117] | 297 | ifs = self.scan.getifnos()
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| [2109] | 298 | projs = []
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| 299 | if len(ifs) > 1:
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| [2117] | 300 | row0if = self.scan.getif(0)
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| [2109] | 301 | for ifno in ifs:
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| 302 | if ifno == row0if: continue
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| 303 | for row in xrange(self.scan.nrow()):
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| 304 | if self.scan.getif(row) == ifno:
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| 305 | projs.append(self.scan.get_masklist(self.mask,row=row))
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| 306 | break
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| 307 | if len(self._polygons)>0:
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| 308 | # Remove old polygons
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| 309 | for polygon in self._polygons: polygon.remove()
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| [2117] | 310 | self._polygons = []
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| [2109] | 311 | # Plot new polygons
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| 312 | if len(msks) > 0:
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| [2117] | 313 | npanel = len(self.p._plotter.subplots)
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| 314 | j = -1
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| [2109] | 315 | for iloop in range(len(msks)*npanel):
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| 316 | i = iloop % len(msks)
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| 317 | if i == 0 : j += 1
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| 318 | if len(ifs) > 1:
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| 319 | for k in xrange(len(ifs)-1):
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| 320 | self._polygons.append(self.p._plotter.subplots[j]['axes'].axvspan(projs[k][i][0],projs[k][i][1],facecolor='#aaaaaa'))
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| 321 | self._polygons.append(self.p._plotter.subplots[j]['axes'].axvspan(msks[i][0],msks[i][1],facecolor='yellow'))
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| 322 | self.p._plotter.canvas.draw()
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| [1460] | 323 |
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| [2109] | 324 | def finish_selection(self, callback=None):
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| 325 | """
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| 326 | Execute callback function, reset or close plotter window as
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| 327 | necessary.
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| [1623] | 328 |
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| [2109] | 329 | Parameters:
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| 330 | callback: The post processing function to run after
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| 331 | the mask selections are completed.
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| 332 | Specifying the callback function here will overwrite
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| 333 | the one set by set_callback(func)
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| [1826] | 334 |
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| [2109] | 335 | Note this function is automatically called at the end of
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| 336 | select_mask() if once=True.
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| 337 | """
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| 338 | if callback: self.callback=callback
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| 339 | if self.callback: self.callback()
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| 340 | if not self.event: self.p._plotter.register('button_press',None)
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| 341 | # Finish the plot
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| 342 | if not self.newplot:
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| 343 | self.clear_polygon()
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| 344 | else:
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| 345 | self.p._plotter.unmap()
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| 346 | self.p._plotter = None
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| 347 | del self.p
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| [2117] | 348 | self.p = None
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| 349 | self._polygons = []
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| [1621] | 350 |
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| 351 |
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| [2109] | 352 | def clear_polygon(self):
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| 353 | """
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| 354 | Erase masks plots from the plotter.
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| 355 | """
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| [2117] | 356 | if len(self._polygons) > 0:
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| [2109] | 357 | # Remove old polygons
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| 358 | for polygon in self._polygons: polygon.remove()
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| 359 | self.p._plotter.show()
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| [2117] | 360 | self._polygons = []
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| [1621] | 361 |
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| 362 |
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| [2109] | 363 | def get_mask(self):
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| 364 | """
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| 365 | Get the interactively selected channel mask.
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| 366 | Returns:
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| 367 | A list of channel mask.
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| 368 | """
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| 369 | return self.mask
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