source: trunk/external-alma/atnf/PKSIO/NROReader.cc @ 2780

Last change on this file since 2780 was 2780, checked in by Takeshi Nakazato, 11 years ago

New Development: No

JIRA Issue: No

Ready for Test: Yes

Interface Changes: No

What Interface Changed: Please list interface changes

Test Programs: List test programs

Put in Release Notes: Yes/No?

Module(s): Module Names change impacts.

Description: Describe your changes here...

Refactoring reader.


File size: 22.8 KB
Line 
1//#---------------------------------------------------------------------------
2//# NROReader.cc: Base class for NRO headerdata.
3//#---------------------------------------------------------------------------
4//# Copyright (C) 2000-2006
5//# Associated Universities, Inc. Washington DC, USA.
6//#
7//# This library is free software; you can redistribute it and/or modify it
8//# under the terms of the GNU Library General Public License as published by
9//# the Free Software Foundation; either version 2 of the License, or (at your
10//# option) any later version.
11//#
12//# This library is distributed in the hope that it will be useful, but WITHOUT
13//# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
14//# FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Library General Public
15//# License for more details.
16//#
17//# You should have received a copy of the GNU Library General Public License
18//# along with this library; if not, write to the Free Software Foundation,
19//# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
20//#
21//# Correspondence concerning AIPS++ should be addressed as follows:
22//#        Internet email: aips2-request@nrao.edu.
23//#        Postal address: AIPS++ Project Office
24//#                        National Radio Astronomy Observatory
25//#                        520 Edgemont Road
26//#                        Charlottesville, VA 22903-2475 USA
27//#
28//# $Id$
29//#---------------------------------------------------------------------------
30//# Original: 2008/10/30, Takeshi Nakazato, NAOJ
31//#---------------------------------------------------------------------------
32
33#include <atnf/PKSIO/NROReader.h>
34#include <atnf/PKSIO/NRO45Reader.h>
35#include <atnf/PKSIO/ASTEReader.h>
36#include <atnf/PKSIO/ASTEFXReader.h>
37#include <atnf/PKSIO/NRO45FITSReader.h>
38#include <atnf/PKSIO/NROOTFDataset.h>
39#include <atnf/PKSIO/ASTEDataset.h>
40
41#include <measures/Measures/MEpoch.h>
42#include <measures/Measures/MPosition.h>
43#include <measures/Measures/MDirection.h>
44#include <measures/Measures/MCDirection.h>
45#include <measures/Measures/MeasFrame.h>
46#include <measures/Measures/MeasConvert.h>
47
48#include <casa/Logging/LogIO.h>
49#include <casa/IO/RegularFileIO.h>
50#include <casa/OS/File.h>
51#include <casa/OS/Time.h>
52
53#include <stdio.h>
54#include <string>
55#include <iomanip>
56
57using namespace std ;
58
59//
60// getNROReader
61//
62// Return an appropriate NROReader for a NRO 45m and ASTE dataset.
63//
64NROReader *getNROReader( const String filename,
65                         String &datatype )
66{
67  LogIO os( LogOrigin( "", "getNROReader()", WHERE ) ) ;
68
69  // Check accessibility of the input.
70  File inFile( filename ) ;
71  if ( !inFile.exists() ) {
72    datatype = filename + " not found." ;
73    return 0 ;
74  }
75
76  if ( !inFile.isReadable() ) {
77    datatype = filename + " is not readable." ;
78    return 0 ;
79  }
80
81  // Determine the type of input.
82  NROReader *reader = 0;
83  if ( inFile.isRegular() ) {
84    FILE *file ;
85    file = fopen( filename.c_str(), "r" ) ;
86    // read LOFIL0
87    char buf[9];
88    fread( buf, 4, 1, file ) ;
89    buf[4] = '\0' ;
90    // DEBUG
91    //os << LogIO::NORMAL << "getNROReader:: buf = " << String(buf) << LogIO::POST ;
92    //
93    if ( string( buf ) == "XTEN" ) {
94      // FITS data
95      datatype = "NRO 45m FITS" ;
96      reader = new NRO45FITSReader( filename ) ;
97    }
98    else if ( string( buf ) == "RW-F") {
99      // ASTE-FX data
100      datatype = "ASTE-FX";
101      reader = new ASTEFXReader( filename );
102    } else {
103      // otherwise, read SITE0
104      NRODataset *d = new NROOTFDataset( filename ) ;
105      int size = d->getDataSize() - 188 ;
106      delete d ;
107      fseek( file, size, SEEK_SET ) ;
108      fread( buf, 8, 1, file ) ;
109      buf[8] = '\0' ;
110      // DEBUG
111      //cout << "getNROReader:: buf = " << buf << endl ;
112      //
113      if ( string( buf ) == "NRO" ) {
114        // NRO 45m data
115        datatype = "NRO 45m OTF" ;
116        reader = new NRO45Reader( filename );
117      }
118      else {
119        d = new ASTEDataset( filename ) ;
120        size = d->getDataSize() - 188 ;
121        delete d ;
122        fseek( file, size, SEEK_SET ) ;
123        fread( buf, 8, 1, file ) ;
124        buf[8] = '\0' ;
125        // DEBUG
126        //cout << "getNROReader:: buf = " << buf << endl ;
127        //
128        if ( string( buf ) == "ASTE" ) {
129          // ASTE data
130          datatype = "ASTE" ;
131          reader = new ASTEReader( filename ) ;
132        }
133        else {
134          datatype = "UNRECOGNIZED INPUT FORMAT";
135        }
136      }
137    }
138    fclose( file ) ;
139  } else {
140    datatype = "UNRECOGNIZED INPUT FORMAT";
141  }
142
143  // DEBUG
144  os << LogIO::NORMAL << "Data format of " << filename << ": " << datatype << LogIO::POST ;
145  //
146
147  // return reader if exists
148  if ( reader ) {
149    reader->read() ;
150    return reader ;
151  }
152
153  return 0 ;
154}
155
156
157//
158// getNROReader
159//
160// Search a list of directories for a NRO 45m and ASTE dataset and return an
161// appropriate NROReader for it.
162//
163NROReader* getNROReader( const String name,
164                         const Vector<String> directories,
165                         int &iDir,
166                         String &datatype )
167{
168  int nDir = directories.size();
169  for ( iDir = 0; iDir < nDir; iDir++ ) {
170    string inName = directories[iDir] + "/" + name;
171    NROReader *reader = getNROReader( inName, datatype ) ;
172
173    if (reader != 0) {
174      return reader;
175    }
176  }
177
178  iDir = -1;
179  return 0;
180}
181
182
183//----------------------------------------------------------------------
184// constructor
185NROReader::NROReader( string name )
186  : dataset_( NULL ),
187    srcdir_( 0 ),
188    msrcdir_( 0 ),
189    freqRefFromVREF_( false ) // import frequency as REST
190{
191  // initialization
192  filename_ = name ;
193  coord_ = -1 ;
194}
195
196// destructor
197NROReader::~NROReader()
198{
199}
200
201// Read data header
202Int NROReader::read()
203{
204  LogIO os( LogOrigin( "NROReader", "read()", WHERE ) ) ;
205
206  int status = 0 ;
207
208  // initialize Dataset object
209  initDataset();
210 
211  // fill Dataset
212  status = dataset_->fillHeader() ;
213
214  if ( status != 0 ) {
215    os << LogIO::SEVERE << "Failed to fill data header." << LogIO::EXCEPTION ;
216  }
217
218  return status ;
219}
220
221// set frequency reference frame
222void NROReader::setFreqRefFromVREF( bool fromVREF )
223{
224  os_.origin( LogOrigin( "NROReader", "setFreqRefFromVREF", WHERE ) ) ;
225  os_ << ((fromVREF) ? "Take frequency reference frame from VREF" :
226          "Use frequency reference frame REST") << LogIO::POST ;
227
228  freqRefFromVREF_ = fromVREF ;
229}
230
231// get spectrum
232vector< vector<double> > NROReader::getSpectrum()
233{
234  return dataset_->getSpectrum() ;
235}
236
237Int NROReader::getPolarizationNum()
238{
239  return dataset_->getPolarizationNum() ;
240}
241
242double NROReader::getStartTime()
243{
244  //char *startTime = dataset_->getLOSTM() ;
245  string startTime = dataset_->getLOSTM() ;
246  //cout << "getStartTime()  startTime = " << startTime << endl ;
247  return getMJD( startTime ) ;
248}
249
250double NROReader::getEndTime()
251{
252  //char *endTime = dataset_->getLOETM() ;
253  string endTime = dataset_->getLOETM() ;
254  return getMJD( endTime ) ;
255}
256
257vector<double> NROReader::getStartIntTime()
258{
259  return dataset_->getStartIntTime() ;
260}
261
262double NROReader::getMJD( char *time )
263{
264  // TODO: should be checked which time zone the time depends on
265  // 2008/11/14 Takeshi Nakazato
266  string strStartTime = string( time ) ;
267  string strYear = strStartTime.substr( 0, 4 ) ;
268  string strMonth = strStartTime.substr( 4, 2 ) ;
269  string strDay = strStartTime.substr( 6, 2 ) ;
270  string strHour = strStartTime.substr( 8, 2 ) ;
271  string strMinute = strStartTime.substr( 10, 2 ) ;
272  string strSecond = strStartTime.substr( 12, strStartTime.size() - 12 ) ;
273  uInt year = atoi( strYear.c_str() ) ;
274  uInt month = atoi( strMonth.c_str() ) ;
275  uInt day = atoi( strDay.c_str() ) ;
276  uInt hour = atoi( strHour.c_str() ) ;
277  uInt minute = atoi( strMinute.c_str() ) ;
278  double second = atof( strSecond.c_str() ) ;
279  Time t( year, month, day, hour, minute, second ) ;
280
281  return t.modifiedJulianDay() ;
282}
283
284double NROReader::getMJD( string strStartTime )
285{
286  // TODO: should be checked which time zone the time depends on
287  // 2008/11/14 Takeshi Nakazato
288  string strYear = strStartTime.substr( 0, 4 ) ;
289  string strMonth = strStartTime.substr( 4, 2 ) ;
290  string strDay = strStartTime.substr( 6, 2 ) ;
291  string strHour = strStartTime.substr( 8, 2 ) ;
292  string strMinute = strStartTime.substr( 10, 2 ) ;
293  string strSecond = strStartTime.substr( 12, strStartTime.size() - 12 ) ;
294  uInt year = atoi( strYear.c_str() ) ;
295  uInt month = atoi( strMonth.c_str() ) ;
296  uInt day = atoi( strDay.c_str() ) ;
297  uInt hour = atoi( strHour.c_str() ) ;
298  uInt minute = atoi( strMinute.c_str() ) ;
299  double second = atof( strSecond.c_str() ) ;
300  Time t( year, month, day, hour, minute, second ) ;
301
302  return t.modifiedJulianDay() ;
303}
304
305vector<Bool> NROReader::getIFs()
306{
307  return dataset_->getIFs() ;
308}
309
310vector<Bool> NROReader::getBeams()
311{
312  vector<Bool> v ;
313  vector<int> arry = dataset_->getARRY() ;
314  for ( uInt i = 0 ; i < arry.size() ; i++ ) {
315    if ( arry[i] != 0 ) {
316      v.push_back( True ) ;
317    }
318  }
319
320  // DEBUG
321  //cout << "NROReader::getBeams()   number of beam is " << v.size() << endl ;
322  //
323
324  return v ;
325}
326
327// Get SRCDIRECTION in RADEC(J2000)
328Vector<Double> NROReader::getSourceDirection()
329{
330  if ( msrcdir_.nelements() == 2 )
331    return msrcdir_ ;
332
333  srcdir_.resize( 2 ) ;
334  srcdir_[0] = Double( dataset_->getRA0() ) ;
335  srcdir_[1] = Double( dataset_->getDEC0() ) ;
336  char epoch[5] ;
337  strncpy( epoch, (dataset_->getEPOCH()).c_str(), 5 ) ;
338  if ( strncmp( epoch, "B1950", 5 ) == 0 ) {
339    // convert to J2000 value
340    MDirection result =
341      MDirection::Convert( MDirection( Quantity( srcdir_[0], "rad" ),
342                                       Quantity( srcdir_[1], "rad" ),
343                                       MDirection::Ref( MDirection::B1950 ) ),
344                           MDirection::Ref( MDirection::J2000 ) ) () ;
345    msrcdir_ = result.getAngle().getValue() ;
346    if ( msrcdir_[0] < 0.0 && srcdir_[0] >= 0.0 )
347      msrcdir_[0] = 2.0 * M_PI + msrcdir_[0] ;
348    //cout << "NROReader::getSourceDirection()  SRCDIRECTION convert from ("
349    //<< srcra << "," << srcdec << ") B1950 to ("
350    //<< v( 0 ) << ","<< v( 1 ) << ") J2000" << endl ;
351    //LogIO os( LogOrigin( "NROReader", "getSourceDirection()", WHERE ) ) ;
352    //os << LogIO::NORMAL << "SRCDIRECTION convert from ("
353    //   << srcra << "," << srcdec << ") B1950 to ("
354    //   << v( 0 ) << ","<< v( 1 ) << ") J2000" << LogIO::POST ;
355  }
356  else if ( strncmp( epoch, "J2000", 5 ) == 0 ) {
357    msrcdir_.reference( srcdir_ ) ;
358  }
359   
360  return msrcdir_ ;
361}
362
363// Get DIRECTION in RADEC(J2000)
364Vector<Double> NROReader::getDirection( int i )
365{
366  Vector<Double> v( 2 ) ;
367  const NRODataRecord *record = dataset_->getRecord( i ) ;
368  char epoch[5] ;
369  strncpy( epoch, (dataset_->getEPOCH()).c_str(), 5 ) ;
370  int icoord = dataset_->getSCNCD() ;
371  double scantime = dataset_->getScanTime( i ) ;
372  initConvert( icoord, scantime, epoch ) ;
373  v[0]= Double( record->SCX ) ;
374  v[1] = Double( record->SCY ) ;
375  if ( converter_.null() )
376    // no conversion
377    return v ;
378  else {
379    Vector<Double> v2 = (*converter_)( v ).getAngle().getValue() ;
380    if ( v2[0] < 0.0 && v[0] >= 0.0 )
381      v2[0] = 2.0 * M_PI + v2[0] ;
382    return v2 ;
383  }
384}
385
386void NROReader::initConvert( int icoord, double t, char *epoch )
387{
388  if ( icoord == 0 && strncmp( epoch, "J2000", 5 ) == 0 )
389    // no conversion
390    return ;
391
392  if ( converter_.null() || icoord != coord_ ) {
393    LogIO os( LogOrigin( "NROReader", "initConvert()", WHERE ) ) ;
394    coord_ = icoord ;
395    if ( coord_ == 0 ) {
396      // RADEC (B1950) -> RADEC (J2000)
397      os << "Creating converter from RADEC (B1950) to RADEC (J2000)" << LogIO::POST ;
398      converter_ = new MDirection::Convert( MDirection::B1950,
399                                            MDirection::J2000 ) ;
400    }
401    else if ( coord_ == 1 ) {
402      // LB -> RADEC (J2000)
403      os << "Creating converter from GALACTIC to RADEC (J2000)" << LogIO::POST ;
404      converter_ = new MDirection::Convert( MDirection::GALACTIC,
405                                            MDirection::J2000 ) ;
406    }
407    else {
408      // coord_ == 2
409      // AZEL -> RADEC (J2000)
410      os << "Creating converter from AZEL to RADEC (J2000)" << LogIO::POST ;
411      if ( mf_.null() ) {
412        mf_ = new MeasFrame() ;
413        vector<double> antpos = getAntennaPosition() ;
414        Vector<Quantity> qantpos( 3 ) ;
415        for ( int ip = 0 ; ip < 3 ; ip++ )
416          qantpos[ip] = Quantity( antpos[ip], "m" ) ;
417        mp_ = MPosition( MVPosition( qantpos ), MPosition::ITRF ) ;
418        mf_->set( mp_ ) ;
419      }
420      converter_ = new MDirection::Convert( MDirection::AZEL,
421                                            MDirection::Ref(MDirection::J2000,
422                                                            *mf_ ) ) ;
423    }
424  }
425
426  if ( coord_ == 2 ) {
427    me_ = MEpoch( Quantity( t, "d" ), MEpoch::UTC ) ;
428    mf_->set( me_ ) ;
429  }
430}
431
432int NROReader::getHeaderInfo( Int &nchan,
433                              Int &npol,
434                              Int &nif,
435                              Int &nbeam,
436                              String &observer,
437                              String &project,
438                              String &obstype,
439                              String &antname,
440                              Vector<Double> &antpos,
441                              Float &equinox,
442                              String &freqref,
443                              Double &reffreq,
444                              Double &bw,
445                              Double &utc,
446                              String &fluxunit,
447                              String &epoch,
448                              String &poltype )
449
450  nchan = dataset_->getNUMCH() ;
451  //cout << "nchan = " << nchan << endl ;
452  npol = getPolarizationNum() ;
453  //cout << "npol = " << npol << endl ;
454  observer = dataset_->getOBSVR() ;
455  //cout << "observer = " << observer << endl ;
456  project = dataset_->getPROJ() ;
457  //cout << "project = " << project << endl ;
458  obstype = dataset_->getSWMOD() ;
459  //cout << "obstype = " << obstype << endl ;
460  antname = dataset_->getSITE() ;
461  //cout << "antname = " << antname << endl ;
462  // TODO: should be investigated antenna position since there are
463  //       no corresponding information in the header
464  // 2008/11/13 Takeshi Nakazato
465  //
466  // INFO: tentative antenna posiiton is obtained for NRO 45m from ITRF website
467  // 2008/11/26 Takeshi Nakazato
468  vector<double> pos = getAntennaPosition() ;
469  antpos = pos ;
470  //cout << "antpos = " << antpos << endl ;
471  string eq = dataset_->getEPOCH() ;
472//   if ( eq.compare( 0, 5, "B1950" ) == 0 )
473//     equinox = 1950.0 ;
474//   else if ( eq.compare( 0, 5, "J2000" ) == 0 )
475//     equinox = 2000.0 ;
476  // equinox is always 2000.0
477  equinox = 2000.0 ;
478  //cout << "equinox = " << equinox << endl ;
479  string vref = dataset_->getVREF() ;
480  if ( vref.compare( 0, 3, "LSR" ) == 0 ) {
481    if ( vref.size() == 3 ) {
482      vref.append( "K" ) ;
483    }
484    else {
485      vref[3] = 'K' ;
486    }
487  }
488  else if ( vref.compare( 0, 3, "GAL" ) == 0 ) {
489    vref = "GALACTO" ;
490  }
491  else if (vref.compare( 0, 3, "HEL" ) == 0 ) {
492    os_.origin( LogOrigin( "NROReader", "getHeaderInfo", WHERE ) ) ;
493    os_ << LogIO::WARN << "Heliocentric frame is not supported. Use Barycentric frame instead." << LogIO::POST ;
494    vref = "BARY" ;
495  }
496  //freqref = vref ;
497  //freqref = "LSRK" ;
498  //freqref = "REST" ;
499  freqref = freqRefFromVREF_ ? vref : "REST" ;
500  //cout << "freqref = " << freqref << endl ;
501  const NRODataRecord *record = dataset_->getRecord( 0 ) ;
502  reffreq = record->FREQ0 ; // rest frequency
503
504  //cout << "reffreq = " << reffreq << endl ;
505  bw = dataset_->getBEBW()[0] ;
506  //cout << "bw = " << bw << endl ;
507  utc = getStartTime() ;
508  //cout << "utc = " << utc << endl ;
509  fluxunit = "K" ;
510  //cout << "fluxunit = " << fluxunit << endl ;
511  epoch = "UTC" ; 
512  //cout << "epoch = " << epoch << endl ;
513  string poltp = dataset_->getPOLTP()[0] ;
514  //cout << "poltp = '" << poltp << "'" << endl ;
515  if ( poltp == "" || poltp[0] == ' ' )
516    //poltp = "None" ;
517    poltp = "linear" ;   // if no polarization type specified, set to "linear"
518  //else if ( strcmp( poltp, "LINR" ) == 0 )
519  else if ( poltp.compare( 0, 1, "LINR", 0, 1 ) == 0 )
520    poltp = "linear" ;
521  //else if ( strcmp( poltp, "CIRL" ) == 0 )
522  else if ( poltp.compare( 0, 1, "CIRL", 0, 1 ) == 0 )
523    poltp = "circular" ;
524  poltype = poltp ;
525  //cout << "poltype = " << poltype << endl ;
526
527  //vector<Bool> ifs = getIFs() ;
528  //nif = ifs.size() ;
529  nif = getNumIF() ;
530  //cout << "nif = " << nif << endl ;
531
532  //vector<Bool> beams = getBeams() ;
533  //nbeam = beams.size() ;
534  nbeam = getNumBeam() ;
535  //cout << "nbeam = " << nbeam << endl ;
536
537  return 0 ;
538}
539
540string NROReader::getScanType( int i )
541{
542  const NRODataRecord *record = dataset_->getRecord( i ) ;
543  string s = record->SCANTP ;
544
545  return s ;
546}
547
548int NROReader::getScanInfo( int irow,
549                            uInt &scanno,
550                            uInt &cycleno,
551                            uInt &ifno,
552                            uInt &beamno,
553                            uInt &polno,
554                            vector<double> &freqs,   
555                            Vector<Double> &restfreq,
556                            uInt &refbeamno,
557                            Double &scantime,
558                            Double &interval,
559                            String &srcname,
560                            String &fieldname,
561                            Vector<Float> &spectra,
562                            Vector<uChar> &flagtra,
563                            Vector<Float> &tsys,
564                            Vector<Double> &direction,
565                            Float &azimuth,
566                            Float &elevation,
567                            Float &parangle,
568                            Float &opacity,
569                            uInt &tcalid,
570                            Int &fitid,
571                            uInt &focusid,
572                            Float &temperature, 
573                            Float &pressure,     
574                            Float &humidity,     
575                            Float &windvel,     
576                            Float &winddir,     
577                            Double &srcvel,
578                            Vector<Double> &/*propermotion*/,
579                            Vector<Double> &srcdir,
580                            Vector<Double> &/*scanrate*/ )
581{
582  static const IPosition oneByOne( 1, 1 );
583
584  // DEBUG
585  //cout << "NROReader::getScanInfo()  irow = " << irow << endl ;
586  //
587  NRODataRecord *record = dataset_->getRecord( irow ) ;
588
589  // scanno
590  scanno = (uInt)(record->ISCAN) ;
591  //cout << "scanno = " << scanno << endl ;
592
593  // cycleno
594  cycleno = 0 ;
595  //cout << "cycleno = " << cycleno << endl ;
596
597  // beamno and ifno
598  string rxname = dataset_->getRX()[0] ;
599  if ( rxname.find("MULT2") != string::npos ) {
600    string arryt = string( record->ARRYT ) ;
601    beamno = dataset_->getSortedArrayId( arryt ) ;
602    ifno = 0 ;
603  }
604  else {
605    beamno = 0 ;
606    string arryt = string( record->ARRYT ) ;
607    ifno = dataset_->getSortedArrayId( arryt ) ;
608  }
609  //cout << "beamno = " << beamno << endl ;
610
611  // polno
612  polno = dataset_->getPolNo( irow ) ;
613  //cout << "polno = " << polno << endl ;
614
615  // freqs (for IFNO and FREQ_ID)
616  //freqs = getFrequencies( irow ) ;
617  freqs = dataset_->getFrequencies( irow ) ;
618  //cout << "freqs = [" << freqs[0] << ", " << freqs[1] << ", " << freqs[2] << "]" << endl ;
619
620  if ( freqRefFromVREF_ ) {
621    freqs = shiftFrequency( freqs,
622                            dataset_->getURVEL(),
623                            dataset_->getVDEF() ) ;
624  }
625
626  // restfreq (for MOLECULE_ID)
627  restfreq.resize( oneByOne ) ;
628  restfreq[0] = record->FREQ0 ;
629  //cout << "restfreq = " << rf << endl ;
630
631  // refbeamno
632  refbeamno = 0 ;
633  //cout << "refbeamno = " << refbeamno << endl ;
634
635  // scantime
636  //scantime = Double( dataset_->getStartIntTime( irow ) ) ;
637  scantime = Double( dataset_->getScanTime( irow ) ) ;
638  //cout << "scantime = " << scantime << endl ;
639
640  // interval
641  interval = Double( dataset_->getIPTIM() ) ;
642  //cout << "interval = " << interval << endl ;
643
644  // srcname
645  srcname = String( dataset_->getOBJ() ) ;
646  //cout << "srcname = " << srcname << endl ;
647
648  // fieldname
649  fieldname = String( dataset_->getOBJ() ) ;
650  //cout << "fieldname = " << fieldname << endl ;
651
652  // spectra
653  vector<double> spec = dataset_->getSpectrum( irow ) ;
654  spectra.resize( spec.size() ) ;
655  //int index = 0 ;
656  Bool b ;
657  Float *fp = spectra.getStorage( b ) ;
658  Float *wp = fp ;
659  for ( vector<double>::iterator i = spec.begin() ;
660        i != spec.end() ; i++ ) {
661    *wp = *i ;
662    wp++ ;
663  }
664  spectra.putStorage( fp, b ) ;
665  //cout << "spec.size() = " << spec.size() << endl ;
666 
667  // flagtra
668  bool setValue = !( flagtra.nelements() == spectra.nelements() ) ;
669  if ( setValue ) {
670    //cout << "flagtra resized. reset values..." << endl ;
671    flagtra.resize( spectra.nelements() ) ;
672    flagtra.set( 0 ) ;
673  }
674  //cout << "flag.size() = " << flag.size() << endl ;
675
676  // tsys
677  tsys.resize( oneByOne ) ;
678  tsys[0] = record->TSYS ;
679  //cout << "tsys[0] = " << tsys[0] << endl ;
680
681  // direction
682  direction = getDirection( irow ) ;
683  //cout << "direction = [" << direction[0] << ", " << direction[1] << "]" << endl ;
684
685  // azimuth
686  azimuth = record->RAZ ;
687  //cout << "azimuth = " << azimuth << endl ;
688
689  // elevation
690  elevation = record->REL ;
691  //cout << "elevation = " << elevation << endl ;
692
693  // parangle
694  parangle = 0.0 ;
695  //cout << "parangle = " << parangle << endl ;
696
697  // opacity
698  opacity = 0.0 ;
699  //cout << "opacity = " << opacity << endl ;
700
701  // tcalid
702  tcalid = 0 ;
703  //cout << "tcalid = " << tcalid << endl ;
704
705  // fitid
706  fitid = -1 ;
707  //cout << "fitid = " << fitid << endl ;
708
709  // focusid
710  focusid = 0 ;
711  //cout << "focusid = " << focusid << endl ;
712
713  // temperature (for WEATHER_ID)
714  temperature = Float( record->TEMP ) ;
715  //cout << "temperature = " << temperature << endl ;
716
717  // pressure (for WEATHER_ID)
718  pressure = Float( record->PATM ) ;
719  //cout << "pressure = " << pressure << endl ;
720
721  // humidity (for WEATHER_ID)
722  humidity = Float( record->PH2O ) ;
723  //cout << "humidity = " << humidity << endl ;
724
725  // windvel (for WEATHER_ID)
726  windvel = Float( record->VWIND ) ;
727  //cout << "windvel = " << windvel << endl ;
728
729  // winddir (for WEATHER_ID)
730  winddir = Float( record->DWIND ) ;
731  //cout << "winddir = " << winddir << endl ;
732 
733  // srcvel
734  srcvel = dataset_->getURVEL() ;
735  //cout << "srcvel = " << srcvel << endl ;
736
737  // propermotion
738  // do nothing
739
740  // srcdir
741  srcdir = getSourceDirection() ;
742  //cout << "srcdir = [" << srcdir[0] << ", " << srcdir[1] << endl ;
743
744  // scanrate
745  // do nothing
746
747  return 0 ;
748}
749
750Int NROReader::getRowNum()
751{
752  return dataset_->getRowNum() ;
753}
754
755vector<double> NROReader::shiftFrequency( const vector<double> &f,
756                                          const double &v,
757                                          const string &vdef )
758{
759  vector<double> r( f ) ;
760  double factor = v / 2.99792458e8 ;
761  if ( vdef.compare( 0, 3, "RAD" ) == 0 ) {
762    factor = 1.0 / ( 1.0 + factor ) ;
763    r[1] *= factor ;
764    r[2] *= factor ;
765  }
766  else if ( vdef.compare( 0, 3, "OPT" ) == 0 ) {
767    factor += 1.0 ;
768    r[1] *= factor ;
769    r[2] *= factor ;
770  }
771  else {
772    cout << "vdef=" << vdef << " is not supported." << endl;
773  }
774  return r ;
775}
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