1 | #ifndef DUCHAMP_CATALOGUE_WRITER_H_ |
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2 | #define DUCHAMP_CATALOGUE_WRITER_H_ |
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3 | |
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4 | #include <ios> |
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5 | #include <string> |
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6 | #include <vector> |
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7 | #include <duchamp/param.hh> |
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8 | #include <duchamp/fitsHeader.hh> |
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9 | #include <duchamp/Detection/detection.hh> |
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10 | #include <duchamp/Outputs/columns.hh> |
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11 | #include <duchamp/Utils/Statistics.hh> |
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12 | #include <duchamp/Cubes/cubes.hh> |
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13 | |
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14 | namespace duchamp { |
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15 | |
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16 | /// @brief Base class for writing out catalogues. |
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17 | /// @details This class forms the basis for derived classes that |
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18 | /// handle writing of the catalogue to different types of files. The |
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19 | /// class makes no assumption about the type of output (eg. file or |
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20 | /// stream etc), but it does hold pointers to all the metadata from |
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21 | /// the cube, as well as to the object list. Implementations of the |
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22 | /// individual writing methods is left up to the base class. |
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23 | class CatalogueWriter |
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24 | { |
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25 | public: |
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26 | CatalogueWriter(); |
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27 | CatalogueWriter(std::string name); |
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28 | CatalogueWriter(const CatalogueWriter& other); |
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29 | CatalogueWriter& operator= (const CatalogueWriter& other); |
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30 | virtual ~CatalogueWriter(){}; |
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31 | |
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32 | /// @brief open the catalogue for writing |
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33 | virtual bool openCatalogue(std::ios_base::openmode mode = std::ios_base::out )=0; |
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34 | |
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35 | /// @brief Write header information - not including parameters |
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36 | virtual void writeHeader() = 0; |
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37 | |
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38 | /// @brief Write the input parameters |
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39 | virtual void writeParameters() = 0; |
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40 | |
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41 | /// @brief Write out the entire catalogue |
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42 | virtual void writeEntries() = 0; |
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43 | |
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44 | /// @brief Write a single catalogue entry based on a detected object |
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45 | virtual void writeEntry(Detection *object) = 0; |
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46 | |
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47 | /// @brief Write footer information -- stuff to come after the catalogue table |
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48 | virtual void writeFooter() = 0; |
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49 | |
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50 | /// @brief Close the catalogue (file/stream/whatever) |
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51 | virtual bool closeCatalogue() = 0; |
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52 | |
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53 | void setName(std::string s){itsName=s;}; |
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54 | std::string name(){return itsName;}; |
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55 | bool isOpen(){return itsOpenFlag;}; |
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56 | std::vector<Catalogues::Column> columnSpec(){return *itsColumnSpecification;}; |
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57 | void setColumnSpec(std::vector<Catalogues::Column> *cols){itsColumnSpecification = cols;}; |
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58 | void setParam(Param *par){itsParam=par;}; |
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59 | void setStats(Statistics::StatsContainer<float> *stats){itsStats=stats;}; |
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60 | void setHead(FitsHeader *head){itsHead=head;}; |
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61 | void setObjectList(std::vector<Detection> *objlist){itsObjectList=objlist;}; |
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62 | |
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63 | /// @brief Set up the pointers to point to the cube's metadata |
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64 | void setup(Cube *cube); |
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65 | |
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66 | protected: |
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67 | /// @brief The name of the output file, if necessary |
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68 | std::string itsName; |
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69 | /// @brief Is the output open and suitable for writing |
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70 | bool itsOpenFlag; |
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71 | /// @brief A pointer to the list of column specifications |
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72 | std::vector<Catalogues::Column> *itsColumnSpecification; |
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73 | /// @brief A pointer to the set of input parameters |
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74 | Param *itsParam; |
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75 | /// @brief A pointer to the statistics used by the cube |
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76 | Statistics::StatsContainer<float> *itsStats; |
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77 | /// @brief A pointer to the fits header description |
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78 | FitsHeader *itsHead; |
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79 | /// @brief A pointer to the list of detected objects |
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80 | std::vector<Detection> *itsObjectList; |
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81 | /// @brief The cube dimensions |
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82 | size_t *itsCubeDim; |
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83 | |
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84 | }; |
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85 | |
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86 | } |
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87 | |
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88 | |
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89 | #endif |
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