source: trunk/docs/Guide.tex @ 208

Last change on this file since 208 was 208, checked in by Matthew Whiting, 18 years ago
  • Enabled saving and reading in of a smoothed array, in manner directly analogous to that for the recon array.
    • New file : src/Cubes/readSmooth.cc
    • The other new functions go in existing files eg. saveImage.cc
    • Renamed some functions (like writeHeader...) to be more obvious what they do.
    • The reading in is taken care of by new function Cube::readSavedArrays() -- handles both smoothed and recon'd arrays.
    • Associated parameters in Param class
    • Clarified names of FITS header strings in duchamp.hh.
  • Updated the documentation to describe the ability to smooth a cube.
  • Added description of feedback mechanisms in the Install appendix.
  • Also, Hanning class improved to guard against memory leaks.


File size: 4.2 KB
RevLine 
[18]1\documentclass[12pt,a4paper]{article}
[158]2%\documentclass[12pt,a4paper]{report}
[18]3
[103]4%%%%%% LINE SPACING %%%%%%%%%%%%
5\usepackage{setspace}
6\singlespacing
7%\onehalfspacing
8%\doublespacing
9
[18]10%Define a test for doing PDF format -- use different code below
11\newif\ifPDF
12\ifx\pdfoutput\undefined\PDFfalse
13\else\ifnum\pdfoutput > 0\PDFtrue
14     \else\PDFfalse
15     \fi
16\fi
17
[162]18\textwidth=165 mm
[71]19\textheight=245 mm
[158]20\topmargin=0 mm
[3]21\oddsidemargin=0 mm
22\parindent=6 mm
23
[18]24\usepackage[sort]{natbib}
25\usepackage{lscape}
26\bibpunct[,]{(}{)}{;}{a}{}{,}
27
[158]28%\newcommand{\secA}{\chapter}
29%\newcommand{\secB}{\section}
30%\newcommand{\secC}{\subsection}
31
32\newcommand{\secA}{\section}
33\newcommand{\secB}{\subsection}
34\newcommand{\secC}{\subsubsection}
35
36
[3]37\newcommand{\eg}{e.g.\ }
38\newcommand{\ie}{i.e.\ }
[158]39\newcommand{\hi}{H\textsc{i}}
40\newcommand{\hipass}{\textsc{hipass}}
[103]41\newcommand{\duchamp}{\emph{Duchamp}}
42\newcommand{\atrous}{\textit{{\`a} trous}}
43\newcommand{\Atrous}{\textit{{\`A} trous}}
[3]44\newcommand{\diff}{{\rm d}}
45\newcommand{\entrylabel}[1]{\mbox{\textsf{\bf{#1:}}}\hfil}
46\newenvironment{entry}
47        {\begin{list}{}%
48                {\renewcommand{\makelabel}{\entrylabel}%
49                        \setlength{\labelwidth}{30mm}%
50                        \setlength{\labelsep}{5pt}%
51                        \setlength{\itemsep}{2pt}%
52                        \setlength{\parsep}{2pt}%
53                        \setlength{\leftmargin}{35mm}%
54                }%
55        }%
56{\end{list}}
57
[158]58%%%%%%% FANCY HEADINGS %%%%%%%%%%
59%\usepackage{fancyheadings}
60%\pagestyle{fancyplain}
61%\addtolength{\headheight}{1.6pt}
62%\addtolength{\headwidth}{\marginparsep}
63%\addtolength{\headwidth}{\marginparwidth}
64%\renewcommand{\secAmark}[1]
65%                {\markboth{#1}{}}
66%\renewcommand{\secBmark}[1]
67%                {\markright{\thesection\ #1}}
68%\lhead[\fancyplain{}{\bfseries\thepage}]
69%      {\fancyplain{}{\bfseries\rightmark}}
70%\rhead[\fancyplain{}{\bfseries\leftmark}]
71%      {\fancyplain{}{\bfseries\thepage}}
72%\cfoot{}
[18]73
74% If we are creating a PDF, use different options for graphicx, hyperref.
75\ifPDF
76  \usepackage[pdftex]{graphicx,color}
[158]77  \usepackage[pdftex,bookmarks]{hyperref}
[18]78  \hypersetup{colorlinks=true,%             
[80]79              citecolor=red,%
80              filecolor=red,%
81              linkcolor=red,%
82              urlcolor=red,%
83              }
[18]84\else
85  \usepackage[dvips]{graphicx}
86  \usepackage[dvips]{hyperref}
87\fi
88
[80]89\pagestyle{headings}
[3]90\begin{document}
91
[158]92\ifPDF
[162]93\pdfbookmark[2]{Title Page}{title}
[158]94\fi
95\newlength{\centreoff}
96\setlength{\centreoff}{-0.5\oddsidemargin}
97\addtolength{\centreoff}{0.5\evensidemargin}
[80]98\thispagestyle{empty}
[158]99\vspace*{\stretch{1}}
100\noindent\hspace*{\centreoff}%
101\makebox[0pt][l]{\begin{minipage}{\textwidth}
102\flushright
103{\Huge\bfseries Source Detection with \duchamp\\%
104A User's Guide
105
106}
107\noindent\rule[-1ex]{\textwidth}{3pt}
108\end{minipage}}
109
110\vspace{\stretch{1}}
111\noindent\hspace*{\centreoff}%
112\makebox[0pt][l]{\begin{minipage}{\textwidth}
113\flushright
114{\bfseries
115Matthew Whiting\\
116Australia Telescope National Facility\\
117CSIRO\\[3ex]}
[194]118Duchamp version~1.06\\
119November 1, 2006
[158]120\end{minipage}}
121
[80]122\begin{figure}[!h]
[162]123%\begin{center}
[80]124\includegraphics[width=\textwidth]{cover_image}
[162]125%\end{center}
[80]126\end{figure}
127
[158]128%\newpage
[162]129\ifPDF
130\pdfbookmark[2]{Contents}{contents}
131\fi
[3]132\tableofcontents
133
[208]134\newpage
[158]135\input{intro} %Introduction and getting going quickly
[3]136\newpage
[158]137\input{userInputs} %User Inputs
[3]138\newpage
[158]139\input{executionFlow} %What \duchamp\ is doing
[110]140\newpage
[158]141\input{outputs} %Outputs
[3]142\newpage
[158]143\input{hints} %Notes and hints on the use of \duchamp
[3]144\newpage
[158]145\input{future} %Future developments
[3]146
[171]147%\bibliographystyle{plainnat}
148%\bibliographystyle{mn2e}
149%\bibliography{guide}
[3]150
[171]151\newpage
152\ifPDF
153\pdfbookmark[1]{References}{references}
154\fi
155\ifPDF
156\input{Guide-URL-bib}
157\else
158\input{Guide-noURL-bib}
159\fi
[3]160
[158]161\appendix
[3]162\newpage
[158]163\input{app-install} %Obtaining and installing \duchamp
[87]164\newpage
[158]165\input{app-param} %Available parameters
[87]166\newpage
[158]167\input{app-paramEx} %Example parameter files
[3]168
[158]169\input{app-resultsEx} %Example results files
[3]170
[158]171\input{app-VOTable} %Example VOTable output
[3]172
[158]173\input{app-Karma} %Example Karma annotation file output
[24]174\newpage
[158]175\input{app-stats} %Robust statistics for a Normal distribution
[24]176
[158]177\input{app-waveletNoise} %How Gaussian noise changes with wavelet scale
[24]178
179
180\end{document}
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