source: trunk/docs/Duchamp-Doxyfile @ 275

Last change on this file since 275 was 275, checked in by Matthew Whiting, 17 years ago

Many changes -- almost a week's worth!

  • Major change is to enable spatial smoothing. This incorporated:
    • A new class GaussSmooth? (in eponymous files) to implement this.
    • New parameters concerning setup of Gaussian.
    • New Cube functions to do the smoothing and searching: smoothCube() and smoothNSearch() (the latter not used, but still in the file).
  • Some changes to the statistical calculations:
    • Cube::setCubeStats() now re-worked to be clearer. Smoothed data dealt with directly. setupFDR() now has a switching function to go before it.
    • Improved the way the stats are written to the results file, with new functions.
    • new functions to StatsContainer?: scaleNoise and sigmaToMADFM
    • a new findAllStats() function to return all four statistical parameters, which is made use of by the StatsContainer? calculate() functions.

Other changes include:

  • Lutz_detect now does not check for the minsize criterion.
  • New function Param::makeBlankMask() to make a mask array.
  • FitsHeader? now has a bpaKeyword member
  • Fixed drawContours() function so that it can deal with data outside box.
  • Added new files to Makefile.in
  • Hanning class now has a define(int) function. Definition moved out of the constructor.
  • In the map plots, each object is now marked by the peak location, not the centre.
  • Documentation somewhat updated (bit still to do for smoothing, especially statistics)
  • Other minor changes, including comments.
File size: 42.4 KB
Line 
1# Doxyfile 1.3
2
3# This file describes the settings to be used by the documentation system
4# doxygen (www.doxygen.org) for a project
5#
6# All text after a hash (#) is considered a comment and will be ignored
7# The format is:
8#       TAG = value [value, ...]
9# For lists items can also be appended using:
10#       TAG += value [value, ...]
11# Values that contain spaces should be placed between quotes (" ")
12
13#---------------------------------------------------------------------------
14# General configuration options
15#---------------------------------------------------------------------------
16
17# The PROJECT_NAME tag is a single word (or a sequence of words surrounded
18# by quotes) that should identify the project.
19
20PROJECT_NAME           = Duchamp
21
22# The PROJECT_NUMBER tag can be used to enter a project or revision number.
23# This could be handy for archiving the generated documentation or
24# if some version control system is used.
25
26PROJECT_NUMBER         = 1.0.7
27
28# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
29# base path where the generated documentation will be put.
30# If a relative path is entered, it will be relative to the location
31# where doxygen was started. If left blank the current directory will be used.
32
33OUTPUT_DIRECTORY       = /DATA/SITAR_1/whi550/Code/Duchamp-working/docs/doxygen
34
35# The OUTPUT_LANGUAGE tag is used to specify the language in which all
36# documentation generated by doxygen is written. Doxygen will use this
37# information to generate all constant output in the proper language.
38# The default language is English, other supported languages are:
39# Brazilian, Catalan, Chinese, Chinese-Traditional, Croatian, Czech, Danish, Dutch,
40# Finnish, French, German, Greek, Hungarian, Italian, Japanese, Japanese-en
41# (Japanese with english messages), Korean, Norwegian, Polish, Portuguese,
42# Romanian, Russian, Serbian, Slovak, Slovene, Spanish, Swedish and Ukrainian.
43
44OUTPUT_LANGUAGE        = English
45
46# This tag can be used to specify the encoding used in the generated output.
47# The encoding is not always determined by the language that is chosen,
48# but also whether or not the output is meant for Windows or non-Windows users.
49# In case there is a difference, setting the USE_WINDOWS_ENCODING tag to YES
50# forces the Windows enconding, (this is the default for the Windows binary),
51# whereas setting the tag to NO uses a Unix-style encoding (the default for the
52# all platforms other than Windows).
53
54USE_WINDOWS_ENCODING   = NO
55
56# If the EXTRACT_ALL tag is set to YES doxygen will assume all entities in
57# documentation are documented, even if no documentation was available.
58# Private class members and static file members will be hidden unless
59# the EXTRACT_PRIVATE and EXTRACT_STATIC tags are set to YES
60
61EXTRACT_ALL            = YES
62
63# If the EXTRACT_PRIVATE tag is set to YES all private members of a class
64# will be included in the documentation.
65
66EXTRACT_PRIVATE        = YES
67
68# If the EXTRACT_STATIC tag is set to YES all static members of a file
69# will be included in the documentation.
70
71EXTRACT_STATIC         = YES
72
73# If the EXTRACT_LOCAL_CLASSES tag is set to YES classes (and structs)
74# defined locally in source files will be included in the documentation.
75# If set to NO only classes defined in header files are included.
76
77EXTRACT_LOCAL_CLASSES  = YES
78
79# If the HIDE_UNDOC_MEMBERS tag is set to YES, Doxygen will hide all
80# undocumented members of documented classes, files or namespaces.
81# If set to NO (the default) these members will be included in the
82# various overviews, but no documentation section is generated.
83# This option has no effect if EXTRACT_ALL is enabled.
84
85HIDE_UNDOC_MEMBERS     = NO
86
87# If the HIDE_UNDOC_CLASSES tag is set to YES, Doxygen will hide all
88# undocumented classes that are normally visible in the class hierarchy.
89# If set to NO (the default) these class will be included in the various
90# overviews. This option has no effect if EXTRACT_ALL is enabled.
91
92HIDE_UNDOC_CLASSES     = NO
93
94# If the HIDE_FRIEND_COMPOUNDS tag is set to YES, Doxygen will hide all
95# friend (class|struct|union) declarations.
96# If set to NO (the default) these declarations will be included in the
97# documentation.
98
99HIDE_FRIEND_COMPOUNDS  = NO
100
101# If the HIDE_IN_BODY_DOCS tag is set to YES, Doxygen will hide any
102# documentation blocks found inside the body of a function.
103# If set to NO (the default) these blocks will be appended to the
104# function's detailed documentation block.
105
106HIDE_IN_BODY_DOCS      = NO
107
108# If the BRIEF_MEMBER_DESC tag is set to YES (the default) Doxygen will
109# include brief member descriptions after the members that are listed in
110# the file and class documentation (similar to JavaDoc).
111# Set to NO to disable this.
112
113BRIEF_MEMBER_DESC      = YES
114
115# If the REPEAT_BRIEF tag is set to YES (the default) Doxygen will prepend
116# the brief description of a member or function before the detailed description.
117# Note: if both HIDE_UNDOC_MEMBERS and BRIEF_MEMBER_DESC are set to NO, the
118# brief descriptions will be completely suppressed.
119
120REPEAT_BRIEF           = YES
121
122# If the ALWAYS_DETAILED_SEC and REPEAT_BRIEF tags are both set to YES then
123# Doxygen will generate a detailed section even if there is only a brief
124# description.
125
126ALWAYS_DETAILED_SEC    = NO
127
128# If the INLINE_INHERITED_MEMB tag is set to YES, doxygen will show all inherited
129# members of a class in the documentation of that class as if those members were
130# ordinary class members. Constructors, destructors and assignment operators of
131# the base classes will not be shown.
132
133INLINE_INHERITED_MEMB  = NO
134
135# If the FULL_PATH_NAMES tag is set to YES then Doxygen will prepend the full
136# path before files name in the file list and in the header files. If set
137# to NO the shortest path that makes the file name unique will be used.
138
139FULL_PATH_NAMES        = NO
140
141# If the FULL_PATH_NAMES tag is set to YES then the STRIP_FROM_PATH tag
142# can be used to strip a user defined part of the path. Stripping is
143# only done if one of the specified strings matches the left-hand part of
144# the path. It is allowed to use relative paths in the argument list.
145
146STRIP_FROM_PATH        =
147
148# The INTERNAL_DOCS tag determines if documentation
149# that is typed after a \internal command is included. If the tag is set
150# to NO (the default) then the documentation will be excluded.
151# Set it to YES to include the internal documentation.
152
153INTERNAL_DOCS          = NO
154
155# If the CASE_SENSE_NAMES tag is set to NO then Doxygen will only generate
156# file names in lower case letters. If set to YES upper case letters are also
157# allowed. This is useful if you have classes or files whose names only differ
158# in case and if your file system supports case sensitive file names. Windows
159# users are adviced to set this option to NO.
160
161CASE_SENSE_NAMES       = YES
162
163# If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter
164# (but less readable) file names. This can be useful is your file systems
165# doesn't support long names like on DOS, Mac, or CD-ROM.
166
167SHORT_NAMES            = NO
168
169# If the HIDE_SCOPE_NAMES tag is set to NO (the default) then Doxygen
170# will show members with their full class and namespace scopes in the
171# documentation. If set to YES the scope will be hidden.
172
173HIDE_SCOPE_NAMES       = NO
174
175# If the VERBATIM_HEADERS tag is set to YES (the default) then Doxygen
176# will generate a verbatim copy of the header file for each class for
177# which an include is specified. Set to NO to disable this.
178
179VERBATIM_HEADERS       = YES
180
181# If the SHOW_INCLUDE_FILES tag is set to YES (the default) then Doxygen
182# will put list of the files that are included by a file in the documentation
183# of that file.
184
185SHOW_INCLUDE_FILES     = YES
186
187# If the JAVADOC_AUTOBRIEF tag is set to YES then Doxygen
188# will interpret the first line (until the first dot) of a JavaDoc-style
189# comment as the brief description. If set to NO, the JavaDoc
190# comments  will behave just like the Qt-style comments (thus requiring an
191# explict @brief command for a brief description.
192
193JAVADOC_AUTOBRIEF      = YES
194
195# The MULTILINE_CPP_IS_BRIEF tag can be set to YES to make Doxygen
196# treat a multi-line C++ special comment block (i.e. a block of //! or ///
197# comments) as a brief description. This used to be the default behaviour.
198# The new default is to treat a multi-line C++ comment block as a detailed
199# description. Set this tag to YES if you prefer the old behaviour instead.
200
201MULTILINE_CPP_IS_BRIEF = NO
202
203# If the DETAILS_AT_TOP tag is set to YES then Doxygen
204# will output the detailed description near the top, like JavaDoc.
205# If set to NO, the detailed description appears after the member
206# documentation.
207
208DETAILS_AT_TOP         = NO
209
210# If the INHERIT_DOCS tag is set to YES (the default) then an undocumented
211# member inherits the documentation from any documented member that it
212# reimplements.
213
214INHERIT_DOCS           = YES
215
216# If the INLINE_INFO tag is set to YES (the default) then a tag [inline]
217# is inserted in the documentation for inline members.
218
219INLINE_INFO            = YES
220
221# If the SORT_MEMBER_DOCS tag is set to YES (the default) then doxygen
222# will sort the (detailed) documentation of file and class members
223# alphabetically by member name. If set to NO the members will appear in
224# declaration order.
225
226SORT_MEMBER_DOCS       = YES
227
228# If member grouping is used in the documentation and the DISTRIBUTE_GROUP_DOC
229# tag is set to YES, then doxygen will reuse the documentation of the first
230# member in the group (if any) for the other members of the group. By default
231# all members of a group must be documented explicitly.
232
233DISTRIBUTE_GROUP_DOC   = NO
234
235# The TAB_SIZE tag can be used to set the number of spaces in a tab.
236# Doxygen uses this value to replace tabs by spaces in code fragments.
237
238TAB_SIZE               = 8
239
240# The GENERATE_TODOLIST tag can be used to enable (YES) or
241# disable (NO) the todo list. This list is created by putting \todo
242# commands in the documentation.
243
244GENERATE_TODOLIST      = YES
245
246# The GENERATE_TESTLIST tag can be used to enable (YES) or
247# disable (NO) the test list. This list is created by putting \test
248# commands in the documentation.
249
250GENERATE_TESTLIST      = YES
251
252# The GENERATE_BUGLIST tag can be used to enable (YES) or
253# disable (NO) the bug list. This list is created by putting \bug
254# commands in the documentation.
255
256GENERATE_BUGLIST       = YES
257
258# The GENERATE_DEPRECATEDLIST tag can be used to enable (YES) or
259# disable (NO) the deprecated list. This list is created by putting
260# \deprecated commands in the documentation.
261
262GENERATE_DEPRECATEDLIST= YES
263
264# This tag can be used to specify a number of aliases that acts
265# as commands in the documentation. An alias has the form "name=value".
266# For example adding "sideeffect=\par Side Effects:\n" will allow you to
267# put the command \sideeffect (or @sideeffect) in the documentation, which
268# will result in a user defined paragraph with heading "Side Effects:".
269# You can put \n's in the value part of an alias to insert newlines.
270
271ALIASES                =
272
273# The ENABLED_SECTIONS tag can be used to enable conditional
274# documentation sections, marked by \if sectionname ... \endif.
275
276ENABLED_SECTIONS       =
277
278# The MAX_INITIALIZER_LINES tag determines the maximum number of lines
279# the initial value of a variable or define consist of for it to appear in
280# the documentation. If the initializer consists of more lines than specified
281# here it will be hidden. Use a value of 0 to hide initializers completely.
282# The appearance of the initializer of individual variables and defines in the
283# documentation can be controlled using \showinitializer or \hideinitializer
284# command in the documentation regardless of this setting.
285
286MAX_INITIALIZER_LINES  = 30
287
288# Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C sources
289# only. Doxygen will then generate output that is more tailored for C.
290# For instance some of the names that are used will be different. The list
291# of all members will be omitted, etc.
292
293OPTIMIZE_OUTPUT_FOR_C  = NO
294
295# Set the OPTIMIZE_OUTPUT_JAVA tag to YES if your project consists of Java sources
296# only. Doxygen will then generate output that is more tailored for Java.
297# For instance namespaces will be presented as packages, qualified scopes
298# will look different, etc.
299
300OPTIMIZE_OUTPUT_JAVA   = NO
301
302# Set the SHOW_USED_FILES tag to NO to disable the list of files generated
303# at the bottom of the documentation of classes and structs. If set to YES the
304# list will mention the files that were used to generate the documentation.
305
306SHOW_USED_FILES        = YES
307
308#---------------------------------------------------------------------------
309# configuration options related to warning and progress messages
310#---------------------------------------------------------------------------
311
312# The QUIET tag can be used to turn on/off the messages that are generated
313# by doxygen. Possible values are YES and NO. If left blank NO is used.
314
315QUIET                  = NO
316
317# The WARNINGS tag can be used to turn on/off the warning messages that are
318# generated by doxygen. Possible values are YES and NO. If left blank
319# NO is used.
320
321WARNINGS               = YES
322
323# If WARN_IF_UNDOCUMENTED is set to YES, then doxygen will generate warnings
324# for undocumented members. If EXTRACT_ALL is set to YES then this flag will
325# automatically be disabled.
326
327WARN_IF_UNDOCUMENTED   = YES
328
329# If WARN_IF_DOC_ERROR is set to YES, doxygen will generate warnings for
330# potential errors in the documentation, such as not documenting some
331# parameters in a documented function, or documenting parameters that
332# don't exist or using markup commands wrongly.
333
334WARN_IF_DOC_ERROR      = YES
335
336# The WARN_FORMAT tag determines the format of the warning messages that
337# doxygen can produce. The string should contain the $file, $line, and $text
338# tags, which will be replaced by the file and line number from which the
339# warning originated and the warning text.
340
341WARN_FORMAT            = "$file:$line: $text"
342
343# The WARN_LOGFILE tag can be used to specify a file to which warning
344# and error messages should be written. If left blank the output is written
345# to stderr.
346
347WARN_LOGFILE           =
348
349#---------------------------------------------------------------------------
350# configuration options related to the input files
351#---------------------------------------------------------------------------
352
353# The INPUT tag can be used to specify the files and/or directories that contain
354# documented source files. You may enter file names like "myfile.cpp" or
355# directories like "/usr/src/myproject". Separate the files or directories
356# with spaces.
357
358INPUT                  = /DATA/SITAR_1/whi550/Code/Duchamp-working/src
359
360# If the value of the INPUT tag contains directories, you can use the
361# FILE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
362# and *.h) to filter out the source-files in the directories. If left
363# blank the following patterns are tested:
364# *.c *.cc *.cxx *.cpp *.c++ *.java *.ii *.ixx *.ipp *.i++ *.inl *.h *.hh *.hxx *.hpp
365# *.h++ *.idl *.odl
366
367FILE_PATTERNS          =
368
369# The RECURSIVE tag can be used to turn specify whether or not subdirectories
370# should be searched for input files as well. Possible values are YES and NO.
371# If left blank NO is used.
372
373RECURSIVE              = YES
374
375# The EXCLUDE tag can be used to specify files and/or directories that should
376# excluded from the INPUT source files. This way you can easily exclude a
377# subdirectory from a directory tree whose root is specified with the INPUT tag.
378
379EXCLUDE                =
380
381# The EXCLUDE_SYMLINKS tag can be used select whether or not files or directories
382# that are symbolic links (a Unix filesystem feature) are excluded from the input.
383
384EXCLUDE_SYMLINKS       = NO
385
386# If the value of the INPUT tag contains directories, you can use the
387# EXCLUDE_PATTERNS tag to specify one or more wildcard patterns to exclude
388# certain files from those directories.
389
390EXCLUDE_PATTERNS       =
391
392# The EXAMPLE_PATH tag can be used to specify one or more files or
393# directories that contain example code fragments that are included (see
394# the \include command).
395
396EXAMPLE_PATH           =
397
398# If the value of the EXAMPLE_PATH tag contains directories, you can use the
399# EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
400# and *.h) to filter out the source-files in the directories. If left
401# blank all files are included.
402
403EXAMPLE_PATTERNS       =
404
405# If the EXAMPLE_RECURSIVE tag is set to YES then subdirectories will be
406# searched for input files to be used with the \include or \dontinclude
407# commands irrespective of the value of the RECURSIVE tag.
408# Possible values are YES and NO. If left blank NO is used.
409
410EXAMPLE_RECURSIVE      = NO
411
412# The IMAGE_PATH tag can be used to specify one or more files or
413# directories that contain image that are included in the documentation (see
414# the \image command).
415
416IMAGE_PATH             =
417
418# The INPUT_FILTER tag can be used to specify a program that doxygen should
419# invoke to filter for each input file. Doxygen will invoke the filter program
420# by executing (via popen()) the command <filter> <input-file>, where <filter>
421# is the value of the INPUT_FILTER tag, and <input-file> is the name of an
422# input file. Doxygen will then use the output that the filter program writes
423# to standard output.
424
425INPUT_FILTER           =
426
427# If the FILTER_SOURCE_FILES tag is set to YES, the input filter (if set using
428# INPUT_FILTER) will be used to filter the input files when producing source
429# files to browse (i.e. when SOURCE_BROWSER is set to YES).
430
431FILTER_SOURCE_FILES    = NO
432
433#---------------------------------------------------------------------------
434# configuration options related to source browsing
435#---------------------------------------------------------------------------
436
437# If the SOURCE_BROWSER tag is set to YES then a list of source files will
438# be generated. Documented entities will be cross-referenced with these sources.
439
440SOURCE_BROWSER         = NO
441
442# Setting the INLINE_SOURCES tag to YES will include the body
443# of functions and classes directly in the documentation.
444
445INLINE_SOURCES         = NO
446
447# Setting the STRIP_CODE_COMMENTS tag to YES (the default) will instruct
448# doxygen to hide any special comment blocks from generated source code
449# fragments. Normal C and C++ comments will always remain visible.
450
451STRIP_CODE_COMMENTS    = YES
452
453# If the REFERENCED_BY_RELATION tag is set to YES (the default)
454# then for each documented function all documented
455# functions referencing it will be listed.
456
457REFERENCED_BY_RELATION = YES
458
459# If the REFERENCES_RELATION tag is set to YES (the default)
460# then for each documented function all documented entities
461# called/used by that function will be listed.
462
463REFERENCES_RELATION    = YES
464
465#---------------------------------------------------------------------------
466# configuration options related to the alphabetical class index
467#---------------------------------------------------------------------------
468
469# If the ALPHABETICAL_INDEX tag is set to YES, an alphabetical index
470# of all compounds will be generated. Enable this if the project
471# contains a lot of classes, structs, unions or interfaces.
472
473ALPHABETICAL_INDEX     = NO
474
475# If the alphabetical index is enabled (see ALPHABETICAL_INDEX) then
476# the COLS_IN_ALPHA_INDEX tag can be used to specify the number of columns
477# in which this list will be split (can be a number in the range [1..20])
478
479COLS_IN_ALPHA_INDEX    = 5
480
481# In case all classes in a project start with a common prefix, all
482# classes will be put under the same header in the alphabetical index.
483# The IGNORE_PREFIX tag can be used to specify one or more prefixes that
484# should be ignored while generating the index headers.
485
486IGNORE_PREFIX          =
487
488#---------------------------------------------------------------------------
489# configuration options related to the HTML output
490#---------------------------------------------------------------------------
491
492# If the GENERATE_HTML tag is set to YES (the default) Doxygen will
493# generate HTML output.
494
495GENERATE_HTML          = YES
496
497# The HTML_OUTPUT tag is used to specify where the HTML docs will be put.
498# If a relative path is entered the value of OUTPUT_DIRECTORY will be
499# put in front of it. If left blank `html' will be used as the default path.
500
501HTML_OUTPUT            = html
502
503# The HTML_FILE_EXTENSION tag can be used to specify the file extension for
504# each generated HTML page (for example: .htm,.php,.asp). If it is left blank
505# doxygen will generate files with .html extension.
506
507HTML_FILE_EXTENSION    = .html
508
509# The HTML_HEADER tag can be used to specify a personal HTML header for
510# each generated HTML page. If it is left blank doxygen will generate a
511# standard header.
512
513HTML_HEADER            =
514
515# The HTML_FOOTER tag can be used to specify a personal HTML footer for
516# each generated HTML page. If it is left blank doxygen will generate a
517# standard footer.
518
519HTML_FOOTER            =
520
521# The HTML_STYLESHEET tag can be used to specify a user defined cascading
522# style sheet that is used by each HTML page. It can be used to
523# fine-tune the look of the HTML output. If the tag is left blank doxygen
524# will generate a default style sheet
525
526HTML_STYLESHEET        =
527
528# If the HTML_ALIGN_MEMBERS tag is set to YES, the members of classes,
529# files or namespaces will be aligned in HTML using tables. If set to
530# NO a bullet list will be used.
531
532HTML_ALIGN_MEMBERS     = YES
533
534# If the GENERATE_HTMLHELP tag is set to YES, additional index files
535# will be generated that can be used as input for tools like the
536# Microsoft HTML help workshop to generate a compressed HTML help file (.chm)
537# of the generated HTML documentation.
538
539GENERATE_HTMLHELP      = NO
540
541# If the GENERATE_HTMLHELP tag is set to YES, the CHM_FILE tag can
542# be used to specify the file name of the resulting .chm file. You
543# can add a path in front of the file if the result should not be
544# written to the html output dir.
545
546CHM_FILE               =
547
548# If the GENERATE_HTMLHELP tag is set to YES, the HHC_LOCATION tag can
549# be used to specify the location (absolute path including file name) of
550# the HTML help compiler (hhc.exe). If non empty doxygen will try to run
551# the html help compiler on the generated index.hhp.
552
553HHC_LOCATION           =
554
555# If the GENERATE_HTMLHELP tag is set to YES, the GENERATE_CHI flag
556# controls if a separate .chi index file is generated (YES) or that
557# it should be included in the master .chm file (NO).
558
559GENERATE_CHI           = NO
560
561# If the GENERATE_HTMLHELP tag is set to YES, the BINARY_TOC flag
562# controls whether a binary table of contents is generated (YES) or a
563# normal table of contents (NO) in the .chm file.
564
565BINARY_TOC             = NO
566
567# The TOC_EXPAND flag can be set to YES to add extra items for group members
568# to the contents of the Html help documentation and to the tree view.
569
570TOC_EXPAND             = NO
571
572# The DISABLE_INDEX tag can be used to turn on/off the condensed index at
573# top of each HTML page. The value NO (the default) enables the index and
574# the value YES disables it.
575
576DISABLE_INDEX          = NO
577
578# This tag can be used to set the number of enum values (range [1..20])
579# that doxygen will group on one line in the generated HTML documentation.
580
581ENUM_VALUES_PER_LINE   = 4
582
583# If the GENERATE_TREEVIEW tag is set to YES, a side panel will be
584# generated containing a tree-like index structure (just like the one that
585# is generated for HTML Help). For this to work a browser that supports
586# JavaScript, DHTML, CSS and frames is required (for instance Mozilla 1.0+,
587# Netscape 6.0+, Internet explorer 5.0+, or Konqueror). Windows users are
588# probably better off using the HTML help feature.
589
590GENERATE_TREEVIEW      = NO
591
592# If the treeview is enabled (see GENERATE_TREEVIEW) then this tag can be
593# used to set the initial width (in pixels) of the frame in which the tree
594# is shown.
595
596TREEVIEW_WIDTH         = 250
597
598#---------------------------------------------------------------------------
599# configuration options related to the LaTeX output
600#---------------------------------------------------------------------------
601
602# If the GENERATE_LATEX tag is set to YES (the default) Doxygen will
603# generate Latex output.
604
605GENERATE_LATEX         = YES
606
607# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put.
608# If a relative path is entered the value of OUTPUT_DIRECTORY will be
609# put in front of it. If left blank `latex' will be used as the default path.
610
611LATEX_OUTPUT           = latex
612
613# The LATEX_CMD_NAME tag can be used to specify the LaTeX command name to be
614# invoked. If left blank `latex' will be used as the default command name.
615
616LATEX_CMD_NAME         = latex
617
618# The MAKEINDEX_CMD_NAME tag can be used to specify the command name to
619# generate index for LaTeX. If left blank `makeindex' will be used as the
620# default command name.
621
622MAKEINDEX_CMD_NAME     = makeindex
623
624# If the COMPACT_LATEX tag is set to YES Doxygen generates more compact
625# LaTeX documents. This may be useful for small projects and may help to
626# save some trees in general.
627
628COMPACT_LATEX          = NO
629
630# The PAPER_TYPE tag can be used to set the paper type that is used
631# by the printer. Possible values are: a4, a4wide, letter, legal and
632# executive. If left blank a4wide will be used.
633
634PAPER_TYPE             = a4wide
635
636# The EXTRA_PACKAGES tag can be to specify one or more names of LaTeX
637# packages that should be included in the LaTeX output.
638
639EXTRA_PACKAGES         = amsmath
640
641# The LATEX_HEADER tag can be used to specify a personal LaTeX header for
642# the generated latex document. The header should contain everything until
643# the first chapter. If it is left blank doxygen will generate a
644# standard header. Notice: only use this tag if you know what you are doing!
645
646LATEX_HEADER           =
647
648# If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated
649# is prepared for conversion to pdf (using ps2pdf). The pdf file will
650# contain links (just like the HTML output) instead of page references
651# This makes the output suitable for online browsing using a pdf viewer.
652
653PDF_HYPERLINKS         = YES
654
655# If the USE_PDFLATEX tag is set to YES, pdflatex will be used instead of
656# plain latex in the generated Makefile. Set this option to YES to get a
657# higher quality PDF documentation.
658
659USE_PDFLATEX           = YES
660
661# If the LATEX_BATCHMODE tag is set to YES, doxygen will add the \\batchmode.
662# command to the generated LaTeX files. This will instruct LaTeX to keep
663# running if errors occur, instead of asking the user for help.
664# This option is also used when generating formulas in HTML.
665
666LATEX_BATCHMODE        = NO
667
668# If LATEX_HIDE_INDICES is set to YES then doxygen will not
669# include the index chapters (such as File Index, Compound Index, etc.)
670# in the output.
671
672LATEX_HIDE_INDICES     = NO
673
674#---------------------------------------------------------------------------
675# configuration options related to the RTF output
676#---------------------------------------------------------------------------
677
678# If the GENERATE_RTF tag is set to YES Doxygen will generate RTF output
679# The RTF output is optimised for Word 97 and may not look very pretty with
680# other RTF readers or editors.
681
682GENERATE_RTF           = NO
683
684# The RTF_OUTPUT tag is used to specify where the RTF docs will be put.
685# If a relative path is entered the value of OUTPUT_DIRECTORY will be
686# put in front of it. If left blank `rtf' will be used as the default path.
687
688RTF_OUTPUT             = rtf
689
690# If the COMPACT_RTF tag is set to YES Doxygen generates more compact
691# RTF documents. This may be useful for small projects and may help to
692# save some trees in general.
693
694COMPACT_RTF            = NO
695
696# If the RTF_HYPERLINKS tag is set to YES, the RTF that is generated
697# will contain hyperlink fields. The RTF file will
698# contain links (just like the HTML output) instead of page references.
699# This makes the output suitable for online browsing using WORD or other
700# programs which support those fields.
701# Note: wordpad (write) and others do not support links.
702
703RTF_HYPERLINKS         = NO
704
705# Load stylesheet definitions from file. Syntax is similar to doxygen's
706# config file, i.e. a series of assigments. You only have to provide
707# replacements, missing definitions are set to their default value.
708
709RTF_STYLESHEET_FILE    =
710
711# Set optional variables used in the generation of an rtf document.
712# Syntax is similar to doxygen's config file.
713
714RTF_EXTENSIONS_FILE    =
715
716#---------------------------------------------------------------------------
717# configuration options related to the man page output
718#---------------------------------------------------------------------------
719
720# If the GENERATE_MAN tag is set to YES (the default) Doxygen will
721# generate man pages
722
723GENERATE_MAN           = NO
724
725# The MAN_OUTPUT tag is used to specify where the man pages will be put.
726# If a relative path is entered the value of OUTPUT_DIRECTORY will be
727# put in front of it. If left blank `man' will be used as the default path.
728
729MAN_OUTPUT             = man
730
731# The MAN_EXTENSION tag determines the extension that is added to
732# the generated man pages (default is the subroutine's section .3)
733
734MAN_EXTENSION          = .3
735
736# If the MAN_LINKS tag is set to YES and Doxygen generates man output,
737# then it will generate one additional man file for each entity
738# documented in the real man page(s). These additional files
739# only source the real man page, but without them the man command
740# would be unable to find the correct page. The default is NO.
741
742MAN_LINKS              = NO
743
744#---------------------------------------------------------------------------
745# configuration options related to the XML output
746#---------------------------------------------------------------------------
747
748# If the GENERATE_XML tag is set to YES Doxygen will
749# generate an XML file that captures the structure of
750# the code including all documentation. Note that this
751# feature is still experimental and incomplete at the
752# moment.
753
754GENERATE_XML           = NO
755
756# The XML_SCHEMA tag can be used to specify an XML schema,
757# which can be used by a validating XML parser to check the
758# syntax of the XML files.
759
760XML_SCHEMA             =
761
762# The XML_DTD tag can be used to specify an XML DTD,
763# which can be used by a validating XML parser to check the
764# syntax of the XML files.
765
766XML_DTD                =
767
768#---------------------------------------------------------------------------
769# configuration options for the AutoGen Definitions output
770#---------------------------------------------------------------------------
771
772# If the GENERATE_AUTOGEN_DEF tag is set to YES Doxygen will
773# generate an AutoGen Definitions (see autogen.sf.net) file
774# that captures the structure of the code including all
775# documentation. Note that this feature is still experimental
776# and incomplete at the moment.
777
778GENERATE_AUTOGEN_DEF   = NO
779
780#---------------------------------------------------------------------------
781# configuration options related to the Perl module output
782#---------------------------------------------------------------------------
783
784# If the GENERATE_PERLMOD tag is set to YES Doxygen will
785# generate a Perl module file that captures the structure of
786# the code including all documentation. Note that this
787# feature is still experimental and incomplete at the
788# moment.
789
790GENERATE_PERLMOD       = NO
791
792# If the PERLMOD_LATEX tag is set to YES Doxygen will generate
793# the necessary Makefile rules, Perl scripts and LaTeX code to be able
794# to generate PDF and DVI output from the Perl module output.
795
796PERLMOD_LATEX          = NO
797
798# If the PERLMOD_PRETTY tag is set to YES the Perl module output will be
799# nicely formatted so it can be parsed by a human reader.  This is useful
800# if you want to understand what is going on.  On the other hand, if this
801# tag is set to NO the size of the Perl module output will be much smaller
802# and Perl will parse it just the same.
803
804PERLMOD_PRETTY         = YES
805
806# The names of the make variables in the generated doxyrules.make file
807# are prefixed with the string contained in PERLMOD_MAKEVAR_PREFIX.
808# This is useful so different doxyrules.make files included by the same
809# Makefile don't overwrite each other's variables.
810
811PERLMOD_MAKEVAR_PREFIX =
812
813#---------------------------------------------------------------------------
814# Configuration options related to the preprocessor   
815#---------------------------------------------------------------------------
816
817# If the ENABLE_PREPROCESSING tag is set to YES (the default) Doxygen will
818# evaluate all C-preprocessor directives found in the sources and include
819# files.
820
821ENABLE_PREPROCESSING   = YES
822
823# If the MACRO_EXPANSION tag is set to YES Doxygen will expand all macro
824# names in the source code. If set to NO (the default) only conditional
825# compilation will be performed. Macro expansion can be done in a controlled
826# way by setting EXPAND_ONLY_PREDEF to YES.
827
828MACRO_EXPANSION        = NO
829
830# If the EXPAND_ONLY_PREDEF and MACRO_EXPANSION tags are both set to YES
831# then the macro expansion is limited to the macros specified with the
832# PREDEFINED and EXPAND_AS_PREDEFINED tags.
833
834EXPAND_ONLY_PREDEF     = NO
835
836# If the SEARCH_INCLUDES tag is set to YES (the default) the includes files
837# in the INCLUDE_PATH (see below) will be search if a #include is found.
838
839SEARCH_INCLUDES        = YES
840
841# The INCLUDE_PATH tag can be used to specify one or more directories that
842# contain include files that are not input files but should be processed by
843# the preprocessor.
844
845INCLUDE_PATH           =
846
847# You can use the INCLUDE_FILE_PATTERNS tag to specify one or more wildcard
848# patterns (like *.h and *.hpp) to filter out the header-files in the
849# directories. If left blank, the patterns specified with FILE_PATTERNS will
850# be used.
851
852INCLUDE_FILE_PATTERNS  =
853
854# The PREDEFINED tag can be used to specify one or more macro names that
855# are defined before the preprocessor is started (similar to the -D option of
856# gcc). The argument of the tag is a list of macros of the form: name
857# or name=definition (no spaces). If the definition and the = are
858# omitted =1 is assumed.
859
860PREDEFINED             =
861
862# If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then
863# this tag can be used to specify a list of macro names that should be expanded.
864# The macro definition that is found in the sources will be used.
865# Use the PREDEFINED tag if you want to use a different macro definition.
866
867EXPAND_AS_DEFINED      =
868
869# If the SKIP_FUNCTION_MACROS tag is set to YES (the default) then
870# doxygen's preprocessor will remove all function-like macros that are alone
871# on a line, have an all uppercase name, and do not end with a semicolon. Such
872# function macros are typically used for boiler-plate code, and will confuse the
873# parser if not removed.
874
875SKIP_FUNCTION_MACROS   = YES
876
877#---------------------------------------------------------------------------
878# Configuration::addtions related to external references   
879#---------------------------------------------------------------------------
880
881# The TAGFILES option can be used to specify one or more tagfiles.
882# Optionally an initial location of the external documentation
883# can be added for each tagfile. The format of a tag file without
884# this location is as follows:
885#   TAGFILES = file1 file2 ...
886# Adding location for the tag files is done as follows:
887#   TAGFILES = file1=loc1 "file2 = loc2" ...
888# where "loc1" and "loc2" can be relative or absolute paths or
889# URLs. If a location is present for each tag, the installdox tool
890# does not have to be run to correct the links.
891# Note that each tag file must have a unique name
892# (where the name does NOT include the path)
893# If a tag file is not located in the directory in which doxygen
894# is run, you must also specify the path to the tagfile here.
895
896TAGFILES               =
897
898# When a file name is specified after GENERATE_TAGFILE, doxygen will create
899# a tag file that is based on the input files it reads.
900
901GENERATE_TAGFILE       =
902
903# If the ALLEXTERNALS tag is set to YES all external classes will be listed
904# in the class index. If set to NO only the inherited external classes
905# will be listed.
906
907ALLEXTERNALS           = NO
908
909# If the EXTERNAL_GROUPS tag is set to YES all external groups will be listed
910# in the modules index. If set to NO, only the current project's groups will
911# be listed.
912
913EXTERNAL_GROUPS        = YES
914
915# The PERL_PATH should be the absolute path and name of the perl script
916# interpreter (i.e. the result of `which perl').
917
918PERL_PATH              = /usr/bin/perl
919
920#---------------------------------------------------------------------------
921# Configuration options related to the dot tool   
922#---------------------------------------------------------------------------
923
924# If the CLASS_DIAGRAMS tag is set to YES (the default) Doxygen will
925# generate a inheritance diagram (in Html, RTF and LaTeX) for classes with base or
926# super classes. Setting the tag to NO turns the diagrams off. Note that this
927# option is superceded by the HAVE_DOT option below. This is only a fallback. It is
928# recommended to install and use dot, since it yield more powerful graphs.
929
930CLASS_DIAGRAMS         = YES
931
932# If set to YES, the inheritance and collaboration graphs will hide
933# inheritance and usage relations if the target is undocumented
934# or is not a class.
935
936HIDE_UNDOC_RELATIONS   = YES
937
938# If you set the HAVE_DOT tag to YES then doxygen will assume the dot tool is
939# available from the path. This tool is part of Graphviz, a graph visualization
940# toolkit from AT&T and Lucent Bell Labs. The other options in this section
941# have no effect if this option is set to NO (the default)
942
943HAVE_DOT               = NO
944
945# If the CLASS_GRAPH and HAVE_DOT tags are set to YES then doxygen
946# will generate a graph for each documented class showing the direct and
947# indirect inheritance relations. Setting this tag to YES will force the
948# the CLASS_DIAGRAMS tag to NO.
949
950CLASS_GRAPH            = YES
951
952# If the COLLABORATION_GRAPH and HAVE_DOT tags are set to YES then doxygen
953# will generate a graph for each documented class showing the direct and
954# indirect implementation dependencies (inheritance, containment, and
955# class references variables) of the class with other documented classes.
956
957COLLABORATION_GRAPH    = YES
958
959# If set to YES, the inheritance and collaboration graphs will show the
960# relations between templates and their instances.
961
962TEMPLATE_RELATIONS     = YES
963
964# If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDE_GRAPH, and HAVE_DOT
965# tags are set to YES then doxygen will generate a graph for each documented
966# file showing the direct and indirect include dependencies of the file with
967# other documented files.
968
969INCLUDE_GRAPH          = YES
970
971# If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDED_BY_GRAPH, and
972# HAVE_DOT tags are set to YES then doxygen will generate a graph for each
973# documented header file showing the documented files that directly or
974# indirectly include this file.
975
976INCLUDED_BY_GRAPH      = YES
977
978# If the GRAPHICAL_HIERARCHY and HAVE_DOT tags are set to YES then doxygen
979# will graphical hierarchy of all classes instead of a textual one.
980
981GRAPHICAL_HIERARCHY    = YES
982
983# The DOT_IMAGE_FORMAT tag can be used to set the image format of the images
984# generated by dot. Possible values are png, jpg, or gif
985# If left blank png will be used.
986
987DOT_IMAGE_FORMAT       = png
988
989# The tag DOT_PATH can be used to specify the path where the dot tool can be
990# found. If left blank, it is assumed the dot tool can be found on the path.
991
992DOT_PATH               =
993
994# The DOTFILE_DIRS tag can be used to specify one or more directories that
995# contain dot files that are included in the documentation (see the
996# \dotfile command).
997
998DOTFILE_DIRS           =
999
1000# The MAX_DOT_GRAPH_WIDTH tag can be used to set the maximum allowed width
1001# (in pixels) of the graphs generated by dot. If a graph becomes larger than
1002# this value, doxygen will try to truncate the graph, so that it fits within
1003# the specified constraint. Beware that most browsers cannot cope with very
1004# large images.
1005
1006MAX_DOT_GRAPH_WIDTH    = 1024
1007
1008# The MAX_DOT_GRAPH_HEIGHT tag can be used to set the maximum allows height
1009# (in pixels) of the graphs generated by dot. If a graph becomes larger than
1010# this value, doxygen will try to truncate the graph, so that it fits within
1011# the specified constraint. Beware that most browsers cannot cope with very
1012# large images.
1013
1014MAX_DOT_GRAPH_HEIGHT   = 1024
1015
1016# The MAX_DOT_GRAPH_DEPTH tag can be used to set the maximum depth of the
1017# graphs generated by dot. A depth value of 3 means that only nodes reachable
1018# from the root by following a path via at most 3 edges will be shown. Nodes that
1019# lay further from the root node will be omitted. Note that setting this option to
1020# 1 or 2 may greatly reduce the computation time needed for large code bases. Also
1021# note that a graph may be further truncated if the graph's image dimensions are
1022# not sufficient to fit the graph (see MAX_DOT_GRAPH_WIDTH and MAX_DOT_GRAPH_HEIGHT).
1023# If 0 is used fot the depth value (the default), the graph is not depth constraint.
1024
1025MAX_DOT_GRAPH_DEPTH    = 0
1026
1027# If the GENERATE_LEGEND tag is set to YES (the default) Doxygen will
1028# generate a legend page explaining the meaning of the various boxes and
1029# arrows in the dot generated graphs.
1030
1031GENERATE_LEGEND        = YES
1032
1033# If the DOT_CLEANUP tag is set to YES (the default) Doxygen will
1034# remove the intermedate dot files that are used to generate
1035# the various graphs.
1036
1037DOT_CLEANUP            = YES
1038
1039#---------------------------------------------------------------------------
1040# Configuration::addtions related to the search engine   
1041#---------------------------------------------------------------------------
1042
1043# The SEARCHENGINE tag specifies whether or not a search engine should be
1044# used. If set to NO the values of all tags below this one will be ignored.
1045
1046SEARCHENGINE           = NO
1047
1048# The CGI_NAME tag should be the name of the CGI script that
1049# starts the search engine (doxysearch) with the correct parameters.
1050# A script with this name will be generated by doxygen.
1051
1052CGI_NAME               = search.cgi
1053
1054# The CGI_URL tag should be the absolute URL to the directory where the
1055# cgi binaries are located. See the documentation of your http daemon for
1056# details.
1057
1058CGI_URL                =
1059
1060# The DOC_URL tag should be the absolute URL to the directory where the
1061# documentation is located. If left blank the absolute path to the
1062# documentation, with file:// prepended to it, will be used.
1063
1064DOC_URL                =
1065
1066# The DOC_ABSPATH tag should be the absolute path to the directory where the
1067# documentation is located. If left blank the directory on the local machine
1068# will be used.
1069
1070DOC_ABSPATH            =
1071
1072# The BIN_ABSPATH tag must point to the directory where the doxysearch binary
1073# is installed.
1074
1075BIN_ABSPATH            = /usr/local/bin/
1076
1077# The EXT_DOC_PATHS tag can be used to specify one or more paths to
1078# documentation generated for other projects. This allows doxysearch to search
1079# the documentation for these projects as well.
1080
1081EXT_DOC_PATHS          =
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