[325] | 1 | #!/bin/tcsh |
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[148] | 2 | |
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[325] | 3 | if( $# == 0 ) then |
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| 4 | set progname = ./Duchamp |
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| 5 | else |
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| 6 | set progname = $1 |
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| 7 | endif |
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| 8 | |
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| 9 | set numErrors = 0 |
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| 10 | |
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| 11 | ################################################################## |
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| 12 | # Run the first test, looking at simple sigma-clipped search |
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| 13 | # First, test the results file, just looking at the number of sources |
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| 14 | # and their pixel positions. |
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| 15 | # This is to avoid precision problems with the WCS positions. |
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| 16 | # Second, test the entire log files. |
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| 17 | |
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[148] | 18 | echo "Running the first Duchamp test:" |
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| 19 | echo " [This is a simple sigma-clipping search]" |
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[325] | 20 | rm -f /tmp/duchampRes /tmp/duchampComp /tmp/duchamptest |
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| 21 | $progname -p verification/input1 > /tmp/duchamptest |
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[148] | 22 | echo "Done. Comparison to standard result:" |
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[325] | 23 | set numDet = `grep "Total number" verification/results1.txt | cut -f 6 -d " "` |
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| 24 | if( $numDet == 5 ) then |
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| 25 | tail -5 verification/results1.txt | awk '{print $1,$3,$4,$5}' > /tmp/duchampRes |
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| 26 | tail -5 verification/stdResults1.txt | awk '{print $1,$3,$4,$5}' > /tmp/duchampComp |
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| 27 | if( `diff /tmp/duchampRes /tmp/duchampComp | wc -l` != 0 ) then |
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| 28 | echo " Found correct number of sources, but positions differ." |
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| 29 | echo " ERROR: Differences in positions of sources:" |
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| 30 | diff -I"Results of the Duchamp source finder:" verification/results1.txt verification/stdResults1.txt |
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| 31 | $numErrors++ |
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| 32 | else |
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| 33 | echo " All detections correct." |
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| 34 | endif |
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| 35 | else |
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| 36 | echo " ERROR. Wrong number of sources found." |
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| 37 | echo "Differences in results:" |
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| 38 | diff -I"Results of the Duchamp source finder:" verification/results1.txt verification/stdResults1.txt |
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| 39 | $numErrors++ |
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| 40 | endif |
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| 41 | #Test the log files. |
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| 42 | if( `diff -I"New run of the Duchamp sourcefinder" -I"Executing statement" -I"Duchamp completed:" verification/log1.txt verification/stdLog1.txt | wc -l` == 0 ) then |
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| 43 | echo " Logfiles correct." |
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| 44 | else |
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| 45 | echo " ERROR: Differences in the log files:" |
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| 46 | diff -I"New run of the Duchamp sourcefinder" -I"Executing statement" -I"Duchamp completed:" verification/log1.txt verification/stdLog1.txt |
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| 47 | $numErrors++ |
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| 48 | endif |
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[148] | 49 | |
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[325] | 50 | ################################################################## |
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| 51 | # The next test uses the FDR method, but is otherwise the same. |
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| 52 | |
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[154] | 53 | echo " " |
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[148] | 54 | echo "Running the second Duchamp test:" |
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| 55 | echo " [This uses the FDR method]" |
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[325] | 56 | rm -f /tmp/duchampRes /tmp/duchampComp /tmp/duchamptest |
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| 57 | $progname -p verification/input2 > /tmp/duchamptest |
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[148] | 58 | echo "Done. Comparison to standard result:" |
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[325] | 59 | set numDet = `grep "Total number" verification/results2.txt | cut -f 6 -d " "` |
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| 60 | if( $numDet == 5 ) then |
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| 61 | tail -5 verification/results2.txt | awk '{print $1,$3,$4,$5}' > /tmp/duchampRes |
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| 62 | tail -5 verification/stdResults2.txt | awk '{print $1,$3,$4,$5}' > /tmp/duchampComp |
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| 63 | if( `diff /tmp/duchampRes /tmp/duchampComp | wc -l` != 0 ) then |
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| 64 | echo " Found correct number of sources, but positions differ." |
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| 65 | echo " ERROR: Differences in positions of sources:" |
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| 66 | diff -I"Results of the Duchamp source finder:" verification/results2.txt verification/stdResults2.txt |
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| 67 | $numErrors++ |
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| 68 | else |
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| 69 | echo " All detections correct." |
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| 70 | endif |
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| 71 | else |
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| 72 | echo " ERROR. Wrong number of sources found." |
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| 73 | echo "Differences in results:" |
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| 74 | diff -I"Results of the Duchamp source finder:" verification/results2.txt verification/stdResults2.txt |
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| 75 | $numErrors++ |
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| 76 | endif |
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| 77 | #Test the log files. |
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| 78 | if( `diff -I"New run of the Duchamp sourcefinder" -I"Executing statement" -I"Duchamp completed:" verification/log2.txt verification/stdLog2.txt | wc -l` == 0 ) then |
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| 79 | echo " Logfiles correct." |
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| 80 | else |
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| 81 | echo " ERROR: Differences in the log files:" |
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| 82 | diff -I"New run of the Duchamp sourcefinder" -I"Executing statement" -I"Duchamp completed:" verification/log2.txt verification/stdLog2.txt |
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| 83 | $numErrors++ |
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| 84 | endif |
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[148] | 85 | |
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[325] | 86 | ################################################################## |
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| 87 | # The third test smoothes the cube and uses sigma-clipping |
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| 88 | |
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[154] | 89 | echo " " |
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[148] | 90 | echo "Running the third Duchamp test:" |
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[278] | 91 | echo " [This spatially smoothes the cube, then searches with simple sigma-clipping]" |
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[325] | 92 | echo " [It should take a bit longer than the first two.]" |
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| 93 | rm -f /tmp/duchampRes /tmp/duchampComp /tmp/duchamptest |
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| 94 | $progname -p verification/input3 > /tmp/duchamptest |
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[278] | 95 | echo "Done. Comparison to standard result:" |
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[325] | 96 | set numDet = `grep "Total number" verification/results3.txt | cut -f 6 -d " "` |
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| 97 | if( $numDet == 5 ) then |
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| 98 | tail -5 verification/results3.txt | awk '{print $1,$3,$4,$5}' > /tmp/duchampRes |
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| 99 | tail -5 verification/stdResults3.txt | awk '{print $1,$3,$4,$5}' > /tmp/duchampComp |
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| 100 | if( `diff /tmp/duchampRes /tmp/duchampComp | wc -l` != 0 ) then |
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| 101 | echo " Found correct number of sources, but positions differ." |
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| 102 | echo " ERROR: Differences in positions of sources:" |
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| 103 | diff -I"Results of the Duchamp source finder:" verification/results3.txt verification/stdResults3.txt |
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| 104 | $numErrors++ |
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| 105 | else |
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| 106 | echo " All detections correct." |
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| 107 | endif |
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| 108 | else |
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| 109 | echo " ERROR. Wrong number of sources found." |
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| 110 | echo "Differences in results:" |
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| 111 | diff -I"Results of the Duchamp source finder:" verification/results3.txt verification/stdResults3.txt |
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| 112 | $numErrors++ |
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| 113 | endif |
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| 114 | #Test the log files. |
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| 115 | if( `diff -I"New run of the Duchamp sourcefinder" -I"Executing statement" -I"Duchamp completed:" verification/log3.txt verification/stdLog3.txt | wc -l` == 0 ) then |
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| 116 | echo " Logfiles correct." |
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| 117 | else |
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| 118 | echo " ERROR: Differences in the log files:" |
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| 119 | diff -I"New run of the Duchamp sourcefinder" -I"Executing statement" -I"Duchamp completed:" verification/log3.txt verification/stdLog3.txt |
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| 120 | $numErrors++ |
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| 121 | endif |
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[278] | 122 | |
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[325] | 123 | ################################################################## |
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| 124 | # The final test reconstructs the cube and uses sigma-clipping |
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| 125 | |
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[278] | 126 | echo " " |
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| 127 | echo "Running the fourth Duchamp test:" |
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[148] | 128 | echo " [This reconstructs the cube, then searches with simple sigma-clipping]" |
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[325] | 129 | echo " [It should take a bit longer again]" |
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| 130 | rm -f /tmp/duchampRes /tmp/duchampComp /tmp/duchamptest |
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| 131 | $progname -p verification/input4 > /tmp/duchamptest |
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[148] | 132 | echo "Done. Comparison to standard result:" |
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[325] | 133 | set numDet = `grep "Total number" verification/results4.txt | cut -f 6 -d " "` |
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| 134 | if( $numDet == 5 ) then |
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| 135 | tail -5 verification/results4.txt | awk '{print $1,$3,$4,$5}' > /tmp/duchampRes |
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| 136 | tail -5 verification/stdResults4.txt | awk '{print $1,$3,$4,$5}' > /tmp/duchampComp |
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| 137 | if( `diff /tmp/duchampRes /tmp/duchampComp | wc -l` != 0 ) then |
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| 138 | echo " Found correct number of sources, but positions differ." |
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| 139 | echo " ERROR: Differences in positions of sources:" |
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| 140 | diff -I"Results of the Duchamp source finder:" verification/results4.txt verification/stdResults4.txt |
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| 141 | $numErrors++ |
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| 142 | else |
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| 143 | echo " All detections correct." |
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| 144 | endif |
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| 145 | else |
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| 146 | echo " ERROR. Wrong number of sources found." |
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| 147 | echo "Differences in results:" |
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| 148 | diff -I"Results of the Duchamp source finder:" verification/results4.txt verification/stdResults4.txt |
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| 149 | $numErrors++ |
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| 150 | endif |
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| 151 | #Test the log files. |
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| 152 | if( `diff -I"New run of the Duchamp sourcefinder" -I"Executing statement" -I"Duchamp completed:" verification/log4.txt verification/stdLog4.txt | wc -l` == 0 ) then |
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| 153 | echo " Logfiles correct." |
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| 154 | else |
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| 155 | echo " ERROR: Differences in the log files:" |
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| 156 | diff -I"New run of the Duchamp sourcefinder" -I"Executing statement" -I"Duchamp completed:" verification/log4.txt verification/stdLog4.txt |
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| 157 | $numErrors++ |
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| 158 | endif |
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[148] | 159 | |
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[325] | 160 | ################################################################## |
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| 161 | # Summarise the results |
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| 162 | # Either give the OK, or give some advice about what to do. |
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| 163 | |
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[278] | 164 | echo " " |
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[325] | 165 | if( $numErrors == 0 ) then |
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| 166 | echo "No errors! Everything is working fine." |
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[327] | 167 | echo "\nHappy Finding! If you ever need to report a bug or request an upgrade, go to" |
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| 168 | echo " http://svn.atnf.csiro.au/trac/duchamp/newticket" |
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[325] | 169 | else |
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| 170 | echo "There were some differences in the results compared to the standards." |
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| 171 | echo "Have a look at the diffs to see if they are trivial or not (eg. precision errors)." |
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| 172 | echo "If they are more serious (wrong number of sources found), submit a bug report" |
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[327] | 173 | echo " at http://svn.atnf.csiro.au/trac/duchamp/newticket" |
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[325] | 174 | endif |
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