source: trunk/Makefile.in @ 1221

CFLAGS = -O2 -ftree-vectorize -fPIC

FFLAGS = -fast -O4

CC =    @CC@ $(CFLAGS)
CXX =   @CXX@ $(CFLAGS)
F77=    @F77@ $(FFLAGS)
LINK=   @LINKER@

BASE = ./src

INSTALLDIR = @prefix@/bin
LIBDIR = @prefix@/lib
INCDIR = @prefix@/include/duchamp

V = @PACKAGE_VERSION@
EXEC = Duchamp-$(V)
EXEC-STUB = Duchamp

AR = ar cq
LIB = libduchamp.a
RANLIB = ranlib
SHAREDFLAGS = -shared -Wl,-soname,@SHRLIB@
LIBSO = @SHRLIB@
LIBSO_LN = @SHRLN@

INSTALL = @INSTALL@
LN_S = @LN_S@

PGPLOTINC = @PGPLOTINC@
PGPLOTLIB = @PGPLOTLIB@

CFITSIOINC = @CFITSIOINC@
CFITSIOLIB = @CFITSIOLIB@

WCSINC = @WCSINC@
WCSLIB = @WCSLIB@

CINC = -I$(BASE) $(PGPLOTINC) $(WCSINC) $(CFITSIOINC)

LIBS = $(WCSLIB) $(CFITSIOLIB) $(PGPLOTLIB) 

ATROUSDIR = $(BASE)/ATrous
PIXELMAPDIR = $(BASE)/PixelMap
DETECTIONDIR = $(BASE)/Detection
CUBESDIR = $(BASE)/Cubes
FITSIODIR = $(BASE)/FitsIO
UTILDIR = $(BASE)/Utils
OUTPUTSDIR = $(BASE)/Outputs
TESTDIR = ./verification

HEADS = $(BASE)/config.h\
        $(BASE)/duchamp.hh\
        $(BASE)/pgheader.hh\
        $(BASE)/param.hh\
        $(BASE)/fitsHeader.hh\
        $(PIXELMAPDIR)/Voxel.hh\
        $(PIXELMAPDIR)/Scan.hh\
        $(PIXELMAPDIR)/Object2D.hh\
        $(PIXELMAPDIR)/Object3D.hh\
        $(ATROUSDIR)/atrous.hh\
        $(ATROUSDIR)/filter.hh\
        $(DETECTIONDIR)/detection.hh\
        $(DETECTIONDIR)/finders.hh\
        $(DETECTIONDIR)/ObjectGrower.hh\
        $(CUBESDIR)/cubes.hh\
        $(CUBESDIR)/plots.hh\
        $(FITSIODIR)/Beam.hh\
        $(FITSIODIR)/DuchampBeam.hh\
        $(FITSIODIR)/ReadExisting.hh\
        $(FITSIODIR)/ReadExistingRecon.hh\
        $(FITSIODIR)/ReadExistingSmooth.hh\
        $(FITSIODIR)/WriteArray.hh\
        $(FITSIODIR)/WriteBaselineArray.hh\
        $(FITSIODIR)/WriteMaskArray.hh\
        $(FITSIODIR)/WriteMomentMapArray.hh\
        $(FITSIODIR)/WriteMomentMaskArray.hh\
        $(FITSIODIR)/WriteReconArray.hh\
        $(FITSIODIR)/WriteSmoothArray.hh\
        $(UTILDIR)/Hanning.hh\
        $(UTILDIR)/GaussSmooth1D.hh\
        $(UTILDIR)/GaussSmooth2D.hh\
        $(UTILDIR)/Section.hh\
        $(UTILDIR)/Statistics.hh\
        $(UTILDIR)/utils.hh\
        $(UTILDIR)/feedback.hh\
        $(UTILDIR)/mycpgplot.hh\
        $(UTILDIR)/VOField.hh\
        $(UTILDIR)/VOParam.hh\
        $(OUTPUTSDIR)/columns.hh\
        $(OUTPUTSDIR)/CatalogueSpecification.hh\
        $(OUTPUTSDIR)/CatalogueWriter.hh\
        $(OUTPUTSDIR)/FileCatalogueWriter.hh\
        $(OUTPUTSDIR)/ASCIICatalogueWriter.hh\
        $(OUTPUTSDIR)/VOTableCatalogueWriter.hh\
        $(OUTPUTSDIR)/AnnotationWriter.hh\
        $(OUTPUTSDIR)/KarmaAnnotationWriter.hh\
        $(OUTPUTSDIR)/DS9AnnotationWriter.hh\
        $(OUTPUTSDIR)/CasaAnnotationWriter.hh

OBJECTS-NOPG = $(BASE)/mainDuchamp.o \
        $(BASE)/duchamp.o\
        $(BASE)/param.o\
        $(BASE)/fitsHeader.o\
        $(PIXELMAPDIR)/Voxel.o\
        $(PIXELMAPDIR)/Scan.o\
        $(PIXELMAPDIR)/Object2D.o\
        $(PIXELMAPDIR)/Object3D.o\
        $(ATROUSDIR)/filter.o\
        $(ATROUSDIR)/atrous_1d_reconstruct.o\
        $(ATROUSDIR)/atrous_2d_reconstruct.o\
        $(ATROUSDIR)/atrous_3d_reconstruct.o\
        $(ATROUSDIR)/baselineSubtract.o\
        $(ATROUSDIR)/ReconSearch.o\
        $(DETECTIONDIR)/detection.o\
        $(DETECTIONDIR)/ObjectGrower.o\
        $(DETECTIONDIR)/areClose.o\
        $(DETECTIONDIR)/lutz_detect.o\
        $(DETECTIONDIR)/mergeIntoList.o\
        $(DETECTIONDIR)/outputDetection.o\
        $(DETECTIONDIR)/sorting.o\
        $(DETECTIONDIR)/spectrumDetect.o\
        $(CUBESDIR)/cubes.o\
        $(CUBESDIR)/cubes_extended.o\
        $(CUBESDIR)/baseline.o\
        $(CUBESDIR)/CubicSearch.o\
        $(CUBESDIR)/detectionIO.o\
        $(CUBESDIR)/existingDetections.o\
        $(CUBESDIR)/getImage.o\
        $(CUBESDIR)/invertCube.o\
        $(CUBESDIR)/Merger.o\
        $(CUBESDIR)/momentMap.o\
        $(CUBESDIR)/smoothCube.o\
        $(CUBESDIR)/spectraUtils.o\
        $(CUBESDIR)/trimImage.o\
        $(FITSIODIR)/Beam.o\
        $(FITSIODIR)/DuchampBeam.o\
        $(FITSIODIR)/ReadExisting.o\
        $(FITSIODIR)/ReadExistingRecon.o\
        $(FITSIODIR)/ReadExistingSmooth.o\
        $(FITSIODIR)/WriteArray.o\
        $(FITSIODIR)/WriteBaselineArray.o\
        $(FITSIODIR)/WriteMaskArray.o\
        $(FITSIODIR)/WriteMomentMapArray.o\
        $(FITSIODIR)/WriteMomentMaskArray.o\
        $(FITSIODIR)/WriteReconArray.o\
        $(FITSIODIR)/WriteSmoothArray.o\
        $(FITSIODIR)/dataIO.o\
        $(FITSIODIR)/headerIO.o\
        $(FITSIODIR)/subsection.o\
        $(FITSIODIR)/wcsIO.o\
        $(UTILDIR)/Section.o\
        $(UTILDIR)/Statistics.o\
        $(UTILDIR)/feedback.o\
        $(UTILDIR)/GaussSmooth1D.o\
        $(UTILDIR)/Hanning.o\
        $(UTILDIR)/VOField.o\
        $(UTILDIR)/VOParam.o\
        $(UTILDIR)/getStats.o\
        $(UTILDIR)/getNormalStats.o\
        $(UTILDIR)/getRobustStats.o\
        $(UTILDIR)/linear_regression.o\
        $(UTILDIR)/position_related.o\
        $(UTILDIR)/sort.o\
        $(UTILDIR)/string_related.o\
        $(UTILDIR)/wcsFunctions.o\
        $(UTILDIR)/zscale.o\
        $(OUTPUTSDIR)/columns.o\
        $(OUTPUTSDIR)/CatalogueSpecification.o\
        $(OUTPUTSDIR)/CatalogueWriter.o\
        $(OUTPUTSDIR)/FileCatalogueWriter.o\
        $(OUTPUTSDIR)/ASCIICatalogueWriter.o\
        $(OUTPUTSDIR)/VOTableCatalogueWriter.o\
        $(OUTPUTSDIR)/AnnotationWriter.o\
        $(OUTPUTSDIR)/KarmaAnnotationWriter.o\
        $(OUTPUTSDIR)/DS9AnnotationWriter.o\
        $(OUTPUTSDIR)/CasaAnnotationWriter.o

ifeq ($(strip $(PGPLOTLIB)),)
  OBJECTS = $(OBJECTS-NOPG)
else
  OBJECTS = $(OBJECTS-NOPG)\
        $(CUBESDIR)/drawBlankEdges.o\
        $(CUBESDIR)/drawMomentCutout.o\
        $(CUBESDIR)/outputSpectra.o\
        $(CUBESDIR)/plotting.o\
        $(UTILDIR)/mycpgplot.o\
        $(CUBESDIR)/plots.o\
        $(UTILDIR)/pgplot_related.o
endif

duchamp : $(OBJECTS)
        $(LINK) -o $(EXEC) $(OBJECTS) $(LIBS)

lib     : $(OBJECTS)
        $(AR) $(LIB) $(OBJECTS)
        $(RANLIB) $(LIB)
        $(CXX) $(SHAREDFLAGS) -o $(LIBSO) $(OBJECTS)

createTestImage : $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o
        $(CXX) -o createTestImage.x\
        $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o\
        $(CFITSIOLIB) @LIBS@

install : 
        $(INSTALL) -d -m 2755 $(INSTALLDIR)
        $(INSTALL) -m 755 $(EXEC) $(INSTALLDIR)
        $(RM) $(INSTALLDIR)/$(EXEC-STUB)
        cd $(INSTALLDIR) && $(LN_S) $(EXEC) $(EXEC-STUB)
        -test ! -f $(LIB) || $(INSTALL) -d -m 2755 $(LIBDIR)
        -test ! -f $(LIB) || $(INSTALL) -m 644 $(LIB) $(LIBDIR)
        $(INSTALL) -d -m 2755 $(INCDIR)
        $(INSTALL) -m 644 $(BASE)/*.hh $(INCDIR)
        $(INSTALL) -m 644 $(BASE)/*.h $(INCDIR)
        $(INSTALL) -d -m 2755 $(INCDIR)/Cubes
        $(INSTALL) -m 644 $(CUBESDIR)/*.hh $(INCDIR)/Cubes
        $(INSTALL) -d -m 2755 $(INCDIR)/ATrous
        $(INSTALL) -m 644 $(ATROUSDIR)/*.hh $(INCDIR)/ATrous
        $(INSTALL) -d -m 2755 $(INCDIR)/Detection
        $(INSTALL) -m 644 $(DETECTIONDIR)/*.hh $(INCDIR)/Detection
        $(INSTALL) -d -m 2755 $(INCDIR)/FitsIO
        $(INSTALL) -m 644 $(FITSIODIR)/*.hh $(INCDIR)/FitsIO
        $(INSTALL) -d -m 2755 $(INCDIR)/PixelMap
        $(INSTALL) -m 644 $(PIXELMAPDIR)/*.hh $(INCDIR)/PixelMap
        $(INSTALL) -d -m 2755 $(INCDIR)/Outputs
        $(INSTALL) -m 644 $(OUTPUTSDIR)/*.hh $(INCDIR)/Outputs
        $(INSTALL) -d -m 2755 $(INCDIR)/Utils
        $(INSTALL) -m 644 $(UTILDIR)/*.hh $(INCDIR)/Utils
        $(INSTALL) -m 644 $(UTILDIR)/*.tcc $(INCDIR)/Utils

$(OBJECTS) : $(HEADS)

.cc.o:
        $(CXX) -c $< $(CINC) -o $@

.c.o:
        $(CC) -c $< $(CINC) -o $@

clean : 
        rm -f $(BASE)/*.o $(ATROUSDIR)/*.o $(CUBESDIR)/*.o $(FITSIODIR)/*.o $(DETECTIONDIR)/*.o $(UTILDIR)/*.o $(PIXELMAPDIR)/*.o

cleanest: clean
        rm -rf Makefile config.log config.status src/config.h $(EXEC)