1 | // ----------------------------------------------------------------------- |
---|
2 | // columns.cc: Define a set of columns for Duchamp output. |
---|
3 | // ----------------------------------------------------------------------- |
---|
4 | // Copyright (C) 2006, Matthew Whiting, ATNF |
---|
5 | // |
---|
6 | // This program is free software; you can redistribute it and/or modify it |
---|
7 | // under the terms of the GNU General Public License as published by the |
---|
8 | // Free Software Foundation; either version 2 of the License, or (at your |
---|
9 | // option) any later version. |
---|
10 | // |
---|
11 | // Duchamp is distributed in the hope that it will be useful, but WITHOUT |
---|
12 | // ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or |
---|
13 | // FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License |
---|
14 | // for more details. |
---|
15 | // |
---|
16 | // You should have received a copy of the GNU General Public License |
---|
17 | // along with Duchamp; if not, write to the Free Software Foundation, |
---|
18 | // Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307, USA |
---|
19 | // |
---|
20 | // Correspondence concerning Duchamp may be directed to: |
---|
21 | // Internet email: Matthew.Whiting [at] atnf.csiro.au |
---|
22 | // Postal address: Dr. Matthew Whiting |
---|
23 | // Australia Telescope National Facility, CSIRO |
---|
24 | // PO Box 76 |
---|
25 | // Epping NSW 1710 |
---|
26 | // AUSTRALIA |
---|
27 | // ----------------------------------------------------------------------- |
---|
28 | #include <iostream> |
---|
29 | #include <sstream> |
---|
30 | |
---|
31 | #include <math.h> |
---|
32 | #include <duchamp/duchamp.hh> |
---|
33 | #include <duchamp/fitsHeader.hh> |
---|
34 | #include <vector> |
---|
35 | #include <string> |
---|
36 | #include <duchamp/Detection/detection.hh> |
---|
37 | #include <duchamp/Outputs/columns.hh> |
---|
38 | |
---|
39 | namespace duchamp |
---|
40 | { |
---|
41 | |
---|
42 | namespace Catalogues |
---|
43 | { |
---|
44 | |
---|
45 | |
---|
46 | Column::Column() |
---|
47 | { |
---|
48 | /// @brief Set the default values for the parameters. |
---|
49 | this->itsWidth=1; |
---|
50 | this->itsPrecision=0; |
---|
51 | this->itsName=" "; |
---|
52 | this->itsUnits=" "; |
---|
53 | this->itsType=""; |
---|
54 | this->itsUCD = ""; |
---|
55 | this->itsDatatype = ""; |
---|
56 | this->itsExtraInfo=""; |
---|
57 | this->itsColID=""; |
---|
58 | } |
---|
59 | |
---|
60 | Column::Column(std::string type) |
---|
61 | { |
---|
62 | operator=(defaultColumn(type)); |
---|
63 | } |
---|
64 | |
---|
65 | Column::Column(const Column& c) |
---|
66 | { |
---|
67 | operator=(c); |
---|
68 | } |
---|
69 | |
---|
70 | Column& Column::operator=(const Column& c) |
---|
71 | { |
---|
72 | if(this==&c) return *this; |
---|
73 | this->itsWidth = c.itsWidth; |
---|
74 | this->itsPrecision = c.itsPrecision; |
---|
75 | this->itsName = c.itsName; |
---|
76 | this->itsUnits = c.itsUnits; |
---|
77 | this->itsUCD = c.itsUCD; |
---|
78 | this->itsDatatype = c.itsDatatype; |
---|
79 | this->itsExtraInfo = c.itsExtraInfo; |
---|
80 | this->itsColID = c.itsColID; |
---|
81 | this->itsType = c.itsType; |
---|
82 | return *this; |
---|
83 | } |
---|
84 | |
---|
85 | Column::Column(std::string type, std::string name, std::string units, int width, int prec, std::string ucd, std::string datatype, std::string colID, std::string extraInfo): |
---|
86 | itsType(type), itsName(name), itsUnits(units), itsWidth(width), itsPrecision(prec), itsUCD(ucd), itsDatatype(datatype), itsColID(colID), itsExtraInfo(extraInfo) |
---|
87 | { |
---|
88 | /// A generic constructor designed to make a Column other than |
---|
89 | /// the predefined ones listed in the Column namespace |
---|
90 | /// \param name The title of the column |
---|
91 | /// \param units What units the column takes |
---|
92 | /// \param width The starting width |
---|
93 | /// \param prec The starting precision |
---|
94 | /// \param ucd The UCD relating to the quantity (VOTable use only) |
---|
95 | /// \param datatype The datatype (float/char/int/etc) of the quantity (VOTable) |
---|
96 | /// \param colID The column ID string used in the FIELD entry of a VOTable |
---|
97 | /// \param extraInfo Other information used in the VOTable (eg. a reference to a COOSYS) |
---|
98 | } |
---|
99 | |
---|
100 | //------------------------------------------------------------ |
---|
101 | |
---|
102 | void Column::changePrec(int p) |
---|
103 | { |
---|
104 | /// A direct way to alter the precision without having to use |
---|
105 | /// Column::upPrec(). If the precision increases, the width will |
---|
106 | /// increase by the same amount. If it decreases, no change is |
---|
107 | /// made to the width. |
---|
108 | /// \param p The new precision value. |
---|
109 | |
---|
110 | if(p > this->itsPrecision) this->itsWidth += (p-this->itsPrecision); |
---|
111 | this->itsPrecision = p; |
---|
112 | |
---|
113 | } |
---|
114 | |
---|
115 | //------------------------------------------------------------ |
---|
116 | void Column::printTitle(std::ostream &stream) |
---|
117 | { |
---|
118 | stream << std::setw(this->itsWidth) |
---|
119 | << std::setfill(' ') |
---|
120 | << this->itsName; |
---|
121 | } |
---|
122 | |
---|
123 | void Column::printUnits(std::ostream &stream) |
---|
124 | { |
---|
125 | stream << std::setw(this->itsWidth) |
---|
126 | << std::setfill(' ') |
---|
127 | << this->itsUnits; |
---|
128 | } |
---|
129 | |
---|
130 | void Column::printDash (std::ostream &stream) |
---|
131 | { |
---|
132 | stream << std::setw(this->itsWidth) |
---|
133 | << std::setfill('-') |
---|
134 | << "" |
---|
135 | << std::setfill(' '); |
---|
136 | } |
---|
137 | |
---|
138 | void Column::printBlank(std::ostream &stream) |
---|
139 | { |
---|
140 | stream << std::setw(this->itsWidth) |
---|
141 | << std::setfill(' ') |
---|
142 | << ""; |
---|
143 | } |
---|
144 | |
---|
145 | template <class T> void Column::printEntry(std::ostream &stream, T value) |
---|
146 | { |
---|
147 | /// \param stream Where the printing is done. |
---|
148 | /// \param value The value to be printed. |
---|
149 | |
---|
150 | stream << std::setprecision(this->itsPrecision) |
---|
151 | << std::setw(this->itsWidth) |
---|
152 | << std::setfill(' ') |
---|
153 | << value; |
---|
154 | } |
---|
155 | template void Column::printEntry<int>(std::ostream &stream, int value); |
---|
156 | template void Column::printEntry<long>(std::ostream &stream, long value); |
---|
157 | template void Column::printEntry<unsigned int>(std::ostream &stream, unsigned int value); |
---|
158 | template void Column::printEntry<unsigned long>(std::ostream &stream, unsigned long value); |
---|
159 | template void Column::printEntry<float>(std::ostream &stream, float value); |
---|
160 | template void Column::printEntry<double>(std::ostream &stream, double value); |
---|
161 | template void Column::printEntry<std::string>(std::ostream &stream, std::string value); |
---|
162 | |
---|
163 | |
---|
164 | bool Column::doCol(DESTINATION tableType, bool flagFint) |
---|
165 | { |
---|
166 | /// @details Determines whether a given column is used for a |
---|
167 | /// given table type, based on the Column::type string. |
---|
168 | /// \param tableType The type of table: one of FILE, SCREEN, LOG, VOTABLE. |
---|
169 | /// \param flagFint Whether to use FINT (true) or FTOT |
---|
170 | /// (false). This defaults to true, so need not be given. It only |
---|
171 | /// applies to the screen and votable cases -- both are written for the |
---|
172 | /// results file case. |
---|
173 | /// \return True if column is used for given table type. False |
---|
174 | /// otherwise. False if tableType not one of four listed. |
---|
175 | |
---|
176 | |
---|
177 | std::string FileList[34]={"NUM","NAME","X","Y","Z","RA","DEC","VEL","WRA","WDEC", |
---|
178 | "W50","W20","WVEL","FINT","FTOT","FPEAK","SNRPEAK", |
---|
179 | "X1","X2","Y1","Y2","Z1","Z2","NPIX","FLAG","XAV","YAV", |
---|
180 | "ZAV","XCENT","YCENT","ZCENT","XPEAK","YPEAK","ZPEAK"}; |
---|
181 | std::string ScreenList[21]={"NUM","NAME","X","Y","Z","RA","DEC","VEL","WRA","WDEC", |
---|
182 | "W50","FPEAK","SNRPEAK","X1","X2","Y1", |
---|
183 | "Y2","Z1","Z2","NPIX","FLAG"}; |
---|
184 | std::string LogList[16]={"NUM","X","Y","Z","FTOT","FPEAK","SNRPEAK", |
---|
185 | "X1","X2","Y1","Y2","Z1","Z2","NPIX","NUMCH","SPATSIZE"}; |
---|
186 | std::string VOList[22]={"NUM","NAME","RAJD","DECJD","VEL","WRA","WDEC", |
---|
187 | "W50","W20","WVEL","FPEAK","SNRPEAK","FLAG","XAV","YAV", |
---|
188 | "ZAV","XCENT","YCENT","ZCENT","XPEAK","YPEAK","ZPEAK"}; |
---|
189 | |
---|
190 | bool doIt=false; |
---|
191 | if(tableType == FILE){ |
---|
192 | for(int i=0;i<34 && !doIt;i++) doIt = doIt || (this->itsType==FileList[i]); |
---|
193 | } |
---|
194 | else if(tableType == SCREEN){ |
---|
195 | if(this->itsType=="FTOT") doIt = !flagFint; |
---|
196 | else if(this->itsType == "FINT") doIt = flagFint; |
---|
197 | else for(int i=0;i<21 && !doIt;i++) doIt = doIt || (this->itsType==ScreenList[i]); |
---|
198 | } |
---|
199 | else if(tableType == LOG){ |
---|
200 | for(int i=0;i<16 && !doIt;i++) doIt = doIt || (this->itsType==LogList[i]); |
---|
201 | } |
---|
202 | else if(tableType == VOTABLE){ |
---|
203 | if(this->itsType=="FTOT") doIt = !flagFint; |
---|
204 | else if(this->itsType == "FINT") doIt = flagFint; |
---|
205 | else for(int i=0;i<22 && !doIt;i++) doIt = doIt || (this->itsType==VOList[i]); |
---|
206 | } |
---|
207 | return doIt; |
---|
208 | |
---|
209 | } |
---|
210 | |
---|
211 | Column defaultColumn(std::string type) |
---|
212 | { |
---|
213 | // type|name|units|width|prec|ucd|datatype|extraInfo |
---|
214 | if (type == "NUM") return Column(type,"Obj#","",5,0,"meta.id","int","col_objnum",""); |
---|
215 | else if(type=="NAME") return Column(type,"Name","",8,0,"meta.id;meta.main","char","col_name",""); |
---|
216 | else if(type=="X") return Column(type,"X","",6,prXYZ,"pos.cartesian.x","float","col_x",""); |
---|
217 | else if(type=="Y") return Column(type,"Y","",6,prXYZ,"pos.cartesian.y","float","col_y",""); |
---|
218 | else if(type=="Z") return Column(type,"Z","",6,prXYZ,"pos.cartesian.z","float","col_z",""); |
---|
219 | else if(type=="RA") return Column(type,"RA","",11,0,"","char","col_ra",coordRef); |
---|
220 | else if(type=="DEC") return Column(type,"DEC","",10,0,"","char","col_dec",coordRef); |
---|
221 | else if(type=="RAJD") return Column(type,"RAJD","[deg]",11,prPOS,"","float","col_rajd",coordRef); |
---|
222 | else if(type=="DECJD") return Column(type,"DECJD","[deg]",11,prPOS,"","float","col_decjd",coordRef); |
---|
223 | else if(type=="VEL") return Column(type,"VEL","",7,prVEL,"","float","col_vel",""); |
---|
224 | else if(type=="WRA") return Column(type,"w_RA","[arcmin]",9,prWPOS,"","float","col_wra",coordRef); |
---|
225 | else if(type=="WDEC") return Column(type,"w_DEC","[arcmin]",9,prWPOS,"","float","col_wdec",coordRef); |
---|
226 | else if(type=="W50") return Column(type,"w_50","",7,prVEL,"","float","col_w50",""); |
---|
227 | else if(type=="W20") return Column(type,"w_20","",7,prVEL,"","float","col_w20",""); |
---|
228 | else if(type=="WVEL") return Column(type,"w_VEL","",7,prVEL,"","float","col_wvel",""); |
---|
229 | else if(type=="FINT") return Column(type,"F_int","",10,prFLUX,"phot.flux;spect.line.intensity","float","col_fint",""); |
---|
230 | else if(type=="FTOT") return Column(type,"F_tot","",10,prFLUX,"phot.flux;spect.line.intensity","float","col_ftot",""); |
---|
231 | else if(type=="FPEAK") return Column(type,"F_peak","",9,prFLUX,"phot.flux;spect.line.intensity","float","col_fpeak",""); |
---|
232 | else if(type=="SNRPEAK") return Column(type,"S/Nmax","",7,prSNR,"phot.flux;stat.snr","float","col_snrmax",""); |
---|
233 | else if(type=="X1") return Column(type,"X1","",4,0,"pos.cartesian.x;stat.min","int","col_x1",""); |
---|
234 | else if(type=="Y1") return Column(type,"Y1","",4,0,"pos.cartesian.y;stat.min","int","col_y1",""); |
---|
235 | else if(type=="Z1") return Column(type,"Z1","",4,0,"pos.cartesian.z;stat.min","int","col_z1",""); |
---|
236 | else if(type=="X2") return Column(type,"X2","",4,0,"pos.cartesian.x;stat.max","int","col_x2",""); |
---|
237 | else if(type=="Y2") return Column(type,"Y2","",4,0,"pos.cartesian.y;stat.max","int","col_y2",""); |
---|
238 | else if(type=="Z2") return Column(type,"Z2","",4,0,"pos.cartesian.z;stat.max","int","col_z2",""); |
---|
239 | else if(type=="NPIX") return Column(type,"Npix","[pix]",6,0,"","int","col_npix",""); |
---|
240 | else if(type=="FLAG") return Column(type,"Flag","",5,0,"meta.code.qual","char","col_flag",""); |
---|
241 | else if(type=="XAV") return Column(type,"X_av","",6,prXYZ,"pos.cartesian.x","float","col_xav",""); |
---|
242 | else if(type=="YAV") return Column(type,"Y_av","",6,prXYZ,"pos.cartesian.y","float","col_yav",""); |
---|
243 | else if(type=="ZAV") return Column(type,"Z_av","",6,prXYZ,"pos.cartesian.z","float","col_zav",""); |
---|
244 | else if(type=="XCENT") return Column(type,"X_cent","",7,prXYZ,"pos.cartesian.x","float","col_xcent",""); |
---|
245 | else if(type=="YCENT") return Column(type,"Y_cent","",7,prXYZ,"pos.cartesian.y","float","col_ycent",""); |
---|
246 | else if(type=="ZCENT") return Column(type,"Z_cent","",7,prXYZ,"pos.cartesian.z","float","col_zcent",""); |
---|
247 | else if(type=="XPEAK") return Column(type,"X_peak","",7,prXYZ,"pos.cartesian.x","int","col_xpeak",""); |
---|
248 | else if(type=="YPEAK") return Column(type,"Y_peak","",7,prXYZ,"pos.cartesian.y","int","col_ypeak",""); |
---|
249 | else if(type=="ZPEAK") return Column(type,"Z_peak","",7,prXYZ,"pos.cartesian.z","int","col_zpeak",""); |
---|
250 | else if(type=="NUMCH") return Column(type,"Nch","",6,0,"","int","col_nch",""); |
---|
251 | else if(type=="SPATSIZE") return Column(type,"Sp_size","",8,0,"","int","col_spsize",""); |
---|
252 | else { |
---|
253 | Column col; |
---|
254 | col.setType(type); |
---|
255 | return col; |
---|
256 | } |
---|
257 | |
---|
258 | } |
---|
259 | |
---|
260 | CatalogueSpecification getFullColSet(std::vector<Detection> &objectList, FitsHeader &head) |
---|
261 | { |
---|
262 | /// @details A function that returns a catalogue specification |
---|
263 | /// containing information on the columns necessary for output |
---|
264 | /// to the results file: |
---|
265 | /// Obj#,NAME,X,Y,Z,RA,DEC,VEL,w_RA,w_DEC,w_VEL,F_tot,F_int,F_peak, |
---|
266 | /// X1,X2,Y1,Y2,Z1,Z2,Npix,Flag, |
---|
267 | /// XAV,YAV,ZAV,XCENT,YCENT,ZCENT,XPEAK,YPEAK,ZPEAK |
---|
268 | /// |
---|
269 | /// Each object in the provided objectList is checked to see if it |
---|
270 | /// requires any column to be widened, or for that column to have |
---|
271 | /// its precision increased. |
---|
272 | /// |
---|
273 | /// Both Ftot and Fint are provided -- it is up to the calling |
---|
274 | /// function to determine which to use. |
---|
275 | /// |
---|
276 | /// \param objectList A std::vector list of Detection objects that the |
---|
277 | /// columns need to fit. |
---|
278 | /// \param head The FitsHeader object defining the World Coordinate |
---|
279 | /// System. |
---|
280 | /// \return A CatalogueSpecification |
---|
281 | |
---|
282 | CatalogueSpecification newset; |
---|
283 | |
---|
284 | // desired precisions for fluxes, velocities and SNR value |
---|
285 | int precVel,precFlux,precSNR; |
---|
286 | if(objectList.size()>0){ |
---|
287 | precVel=objectList[0].getVelPrec(); |
---|
288 | precFlux=objectList[0].getFpeakPrec(); // same as FintPrec at this point. |
---|
289 | precSNR=objectList[0].getSNRPrec(); |
---|
290 | } |
---|
291 | else { |
---|
292 | precVel = prVEL; |
---|
293 | precFlux = prFLUX; |
---|
294 | precSNR = prSNR; |
---|
295 | } |
---|
296 | |
---|
297 | // set up the default columns |
---|
298 | newset.addColumn( Column("NUM") ); |
---|
299 | newset.addColumn( Column("NAME") ); |
---|
300 | newset.addColumn( Column("X") ); |
---|
301 | newset.addColumn( Column("Y") ); |
---|
302 | newset.addColumn( Column("Z") ); |
---|
303 | newset.addColumn( Column("RA") ); |
---|
304 | newset.addColumn( Column("DEC") ); |
---|
305 | newset.addColumn( Column("RAJD") ); |
---|
306 | newset.addColumn( Column("DECJD") ); |
---|
307 | newset.addColumn( Column("VEL") ); |
---|
308 | newset.addColumn( Column("WRA") ); |
---|
309 | newset.addColumn( Column("WDEC") ); |
---|
310 | newset.addColumn( Column("W50") ); |
---|
311 | newset.addColumn( Column("W20") ); |
---|
312 | newset.addColumn( Column("WVEL") ); |
---|
313 | newset.addColumn( Column("FINT") ); |
---|
314 | newset.addColumn( Column("FTOT") ); |
---|
315 | newset.addColumn( Column("FPEAK") ); |
---|
316 | newset.addColumn( Column("SNRPEAK") ); |
---|
317 | newset.addColumn( Column("X1") ); |
---|
318 | newset.addColumn( Column("X2") ); |
---|
319 | newset.addColumn( Column("Y1") ); |
---|
320 | newset.addColumn( Column("Y2") ); |
---|
321 | newset.addColumn( Column("Z1") ); |
---|
322 | newset.addColumn( Column("Z2") ); |
---|
323 | newset.addColumn( Column("NPIX") ); |
---|
324 | newset.addColumn( Column("FLAG") ); |
---|
325 | newset.addColumn( Column("XAV") ); |
---|
326 | newset.addColumn( Column("YAV") ); |
---|
327 | newset.addColumn( Column("ZAV") ); |
---|
328 | newset.addColumn( Column("XCENT") ); |
---|
329 | newset.addColumn( Column("YCENT") ); |
---|
330 | newset.addColumn( Column("ZCENT") ); |
---|
331 | newset.addColumn( Column("XPEAK") ); |
---|
332 | newset.addColumn( Column("YPEAK") ); |
---|
333 | newset.addColumn( Column("ZPEAK") ); |
---|
334 | newset.addColumn( Column("NUMCH") ); |
---|
335 | newset.addColumn( Column("SPATSIZE") ); |
---|
336 | |
---|
337 | |
---|
338 | // Now test each object against each new column |
---|
339 | std::vector<Detection>::iterator obj; |
---|
340 | for(obj = objectList.begin(); obj < objectList.end(); obj++){ |
---|
341 | std::string tempstr; |
---|
342 | int tempwidth; |
---|
343 | float val,minval; |
---|
344 | double valD,minvalD; |
---|
345 | |
---|
346 | // Obj# |
---|
347 | tempwidth = int( log10(obj->getID()) + 1) + 1; |
---|
348 | for(int i=newset.column("NUM").getWidth();i<tempwidth;i++) newset.column("NUM").widen(); |
---|
349 | |
---|
350 | // Name |
---|
351 | tempwidth = obj->getName().size() + 1; |
---|
352 | for(int i=newset.column("NAME").getWidth();i<tempwidth;i++) newset.column("NAME").widen(); |
---|
353 | |
---|
354 | // X position |
---|
355 | val = obj->getXcentre() + obj->getXOffset(); |
---|
356 | if((val<1.)&&(val>0.)){ |
---|
357 | minval = pow(10, -1. * (newset.column("X").getPrecision()+1)); |
---|
358 | if(val < minval) newset.column("X").upPrec(); |
---|
359 | } |
---|
360 | tempwidth = int( log10(val) + 1) + newset.column("X").getPrecision() + 2; |
---|
361 | for(int i=newset.column("X").getWidth();i<tempwidth;i++) newset.column("X").widen(); |
---|
362 | // Y position |
---|
363 | val = obj->getYcentre() + obj->getYOffset(); |
---|
364 | if((val<1.)&&(val>0.)){ |
---|
365 | minval = pow(10, -1. * (newset.column("Y").getPrecision()+1)); |
---|
366 | if(val < minval) newset.column("Y").upPrec(); |
---|
367 | } |
---|
368 | tempwidth = int( log10(val) + 1) + newset.column("Y").getPrecision() + 2; |
---|
369 | for(int i=newset.column("Y").getWidth();i<tempwidth;i++) newset.column("Y").widen(); |
---|
370 | // Z position |
---|
371 | val = obj->getZcentre() + obj->getZOffset(); |
---|
372 | if((val<1.)&&(val>0.)){ |
---|
373 | minval = pow(10, -1. * (newset.column("Z").getPrecision()+1)); |
---|
374 | if((val>0.)&&(val < minval)) newset.column("Z").upPrec(); |
---|
375 | } |
---|
376 | tempwidth = int( log10(val) + 1) + newset.column("Z").getPrecision() + 2; |
---|
377 | for(int i=newset.column("Z").getWidth();i<tempwidth;i++) newset.column("Z").widen(); |
---|
378 | |
---|
379 | if(head.isWCS()){ |
---|
380 | // RA -- assign correct title. Check width but should be ok by definition |
---|
381 | tempstr = head.lngtype(); |
---|
382 | newset.column("RA").setName(tempstr); |
---|
383 | tempwidth = obj->getRAs().size() + 1; |
---|
384 | for(int i=newset.column("RA").getWidth();i<tempwidth;i++) newset.column("RA").widen(); |
---|
385 | |
---|
386 | // Dec -- assign correct title. Check width, should be ok by definition |
---|
387 | tempstr = head.lattype(); |
---|
388 | newset.column("DEC").setName(tempstr); |
---|
389 | tempwidth = obj->getDecs().size() + 1; |
---|
390 | for(int i=newset.column("DEC").getWidth();i<tempwidth;i++) newset.column("DEC").widen(); |
---|
391 | |
---|
392 | // RA decimal degrees -- assign correct title. Check width but should be OK |
---|
393 | tempstr = head.lngtype(); |
---|
394 | newset.column("RAJD").setName(tempstr); |
---|
395 | valD = obj->getRA(); |
---|
396 | tempwidth = int( log10(fabs(valD)) + 1) + newset.column("RAJD").getPrecision() + 2; |
---|
397 | for(int i=newset.column("RAJD").getWidth();i<tempwidth;i++) newset.column("RAJD").widen(); |
---|
398 | |
---|
399 | // Dec decimal degrees -- assign correct title. Check width but should be OK |
---|
400 | tempstr = head.lattype(); |
---|
401 | newset.column("DECJD").setName(tempstr); |
---|
402 | valD = obj->getDec(); |
---|
403 | tempwidth = int( log10(fabs(valD)) + 1) + newset.column("DECJD").getPrecision() + 2; |
---|
404 | for(int i=newset.column("DECJD").getWidth();i<tempwidth;i++) newset.column("DECJD").widen(); |
---|
405 | |
---|
406 | // Vel -- check width, title and units. |
---|
407 | if(head.canUseThirdAxis()){ |
---|
408 | if(head.WCS().spec < 0) // if it's not a spectral axis |
---|
409 | newset.column("VEL").setName( head.WCS().ctype[2] ); |
---|
410 | else |
---|
411 | newset.column("VEL").setName(head.getSpectralType()); |
---|
412 | tempwidth = newset.column("VEL").getName().size() + 1; |
---|
413 | for(int i=newset.column("VEL").getWidth();i<tempwidth;i++) newset.column("VEL").widen(); |
---|
414 | if(head.getSpectralUnits().size()>0) |
---|
415 | newset.column("VEL").setUnits("[" + head.getSpectralUnits() + "]"); |
---|
416 | tempwidth = newset.column("VEL").getUnits().size() + 1; |
---|
417 | for(int i=newset.column("VEL").getWidth();i<tempwidth;i++) newset.column("VEL").widen(); |
---|
418 | |
---|
419 | valD = obj->getVel(); |
---|
420 | if((fabs(valD) < 1.)&&(valD>0.)){ |
---|
421 | minvalD = pow(10, -1. * (newset.column("VEL").getPrecision()+1)); |
---|
422 | if(valD < minvalD) newset.column("VEL").upPrec(); |
---|
423 | } |
---|
424 | tempwidth = int(log10(fabs(valD)) + 1) + newset.column("VEL").getPrecision() + 2; |
---|
425 | if(valD<0) tempwidth++; |
---|
426 | for(int i=newset.column("VEL").getWidth();i<tempwidth;i++) newset.column("VEL").widen(); |
---|
427 | } |
---|
428 | |
---|
429 | // w_RA -- check width & title. leave units for the moment. |
---|
430 | tempstr = "w_" + head.lngtype(); |
---|
431 | newset.column("WRA").setName(tempstr); |
---|
432 | tempwidth = newset.column("RA").getUnits().size() + 1; |
---|
433 | for(int i=newset.column("WRA").getWidth();i<tempwidth;i++) newset.column("WRA").widen(); |
---|
434 | valD = obj->getRAWidth(); |
---|
435 | if((fabs(valD) < 1.)&&(valD>0.)){ |
---|
436 | minvalD = pow(10, -1. * (newset.column("WRA").getPrecision()+1)); |
---|
437 | if(valD < minvalD) newset.column("WRA").upPrec(); |
---|
438 | } |
---|
439 | tempwidth = int( log10(fabs(valD)) + 1) + newset.column("WRA").getPrecision() + 2; |
---|
440 | if(valD<0) tempwidth++; |
---|
441 | for(int i=newset.column("WRA").getWidth();i<tempwidth;i++) newset.column("WRA").widen(); |
---|
442 | |
---|
443 | // w_DEC -- check width & title. leave units for the moment. |
---|
444 | tempstr = "w_" + head.lattype(); |
---|
445 | newset.column("WDEC").setName(tempstr); |
---|
446 | tempwidth = newset.column("DEC").getUnits().size() + 1; |
---|
447 | for(int i=newset.column("WDEC").getWidth();i<tempwidth;i++) newset.column("WDEC").widen(); |
---|
448 | valD = obj->getDecWidth(); |
---|
449 | if((fabs(valD) < 1.)&&(valD>0.)){ |
---|
450 | minvalD = pow(10, -1. * (newset.column("WDEC").getPrecision()+1)); |
---|
451 | if(valD < minvalD) newset.column("WDEC").upPrec(); |
---|
452 | } |
---|
453 | tempwidth = int( log10(fabs(valD)) + 1) + newset.column("WDEC").getPrecision() + 2; |
---|
454 | if(valD<0) tempwidth++; |
---|
455 | for(int i=newset.column("WDEC").getWidth();i<tempwidth;i++) newset.column("WDEC").widen(); |
---|
456 | |
---|
457 | // w_50 -- check width, title and units. |
---|
458 | if(head.canUseThirdAxis()){ |
---|
459 | if(head.getSpectralUnits().size()>0) |
---|
460 | newset.column("W50").setUnits("[" + head.getSpectralUnits() + "]"); |
---|
461 | tempwidth = newset.column("W50").getUnits().size() + 1; |
---|
462 | for(int i=newset.column("W50").getWidth();i<tempwidth;i++) newset.column("W50").widen(); |
---|
463 | valD = obj->getW50(); |
---|
464 | if((fabs(valD) < 1.)&&(valD>0.)){ |
---|
465 | minvalD = pow(10, -1. * (newset.column("W50").getPrecision()+1)); |
---|
466 | if(valD < minvalD) newset.column("W50").upPrec(); |
---|
467 | } |
---|
468 | tempwidth = int( log10(fabs(valD)) + 1) + newset.column("W50").getPrecision() + 2; |
---|
469 | if(valD<0) tempwidth++; |
---|
470 | for(int i=newset.column("W50").getWidth();i<tempwidth;i++) newset.column("W50").widen(); |
---|
471 | } |
---|
472 | |
---|
473 | // w_20 -- check width, title and units. |
---|
474 | if(head.canUseThirdAxis()){ |
---|
475 | if(head.getSpectralUnits().size()>0) |
---|
476 | newset.column("W20").setUnits("[" + head.getSpectralUnits() + "]"); |
---|
477 | tempwidth = newset.column("W20").getUnits().size() + 1; |
---|
478 | for(int i=newset.column("W20").getWidth();i<tempwidth;i++)newset.column("W20").widen(); |
---|
479 | valD = obj->getW20(); |
---|
480 | if((fabs(valD) < 1.)&&(valD>0.)){ |
---|
481 | minvalD = pow(10, -1. * (newset.column("W20").getPrecision()+1)); |
---|
482 | if(valD < minvalD) newset.column("W20").upPrec(); |
---|
483 | } |
---|
484 | tempwidth = int( log10(fabs(valD)) + 1) + newset.column("W20").getPrecision() + 2; |
---|
485 | if(valD<0) tempwidth++; |
---|
486 | for(int i=newset.column("W20").getWidth();i<tempwidth;i++) newset.column("W20").widen(); |
---|
487 | } |
---|
488 | |
---|
489 | // w_Vel -- check width, title and units. |
---|
490 | if(head.canUseThirdAxis()){ |
---|
491 | if(head.WCS().spec < 0) // if it's not a spectral axis |
---|
492 | newset.column("WVEL").setName( std::string("w_") + head.WCS().ctype[2] ); |
---|
493 | else |
---|
494 | newset.column("WVEL").setName(std::string("w_")+head.getSpectralType()); |
---|
495 | if(head.getSpectralUnits().size()>0) |
---|
496 | newset.column("WVEL").setUnits("[" + head.getSpectralUnits() + "]"); |
---|
497 | tempwidth = newset.column("WVEL").getUnits().size() + 1; |
---|
498 | for(int i=newset.column("WVEL").getWidth();i<tempwidth;i++)newset.column("WVEL").widen(); |
---|
499 | tempwidth = newset.column("WVEL").getName().size() + 1; |
---|
500 | for(int i=newset.column("WVEL").getWidth();i<tempwidth;i++) newset.column("WVEL").widen(); |
---|
501 | valD = obj->getVelWidth(); |
---|
502 | if((fabs(valD) < 1.)&&(valD>0.)){ |
---|
503 | minvalD = pow(10, -1. * (newset.column("WVEL").getPrecision()+1)); |
---|
504 | if(valD < minvalD) newset.column("WVEL").upPrec(); |
---|
505 | } |
---|
506 | tempwidth = int( log10(fabs(valD)) + 1) + newset.column("WVEL").getPrecision() + 2; |
---|
507 | if(valD<0) tempwidth++; |
---|
508 | for(int i=newset.column("WVEL").getWidth();i<tempwidth;i++) newset.column("WVEL").widen(); |
---|
509 | } |
---|
510 | |
---|
511 | // F_int -- check width & units |
---|
512 | if(head.getIntFluxUnits().size()>0) |
---|
513 | newset.column("FINT").setUnits("[" + head.getIntFluxUnits() + "]"); |
---|
514 | tempwidth = newset.column("FINT").getUnits().size() + 1; |
---|
515 | for(int i=newset.column("FINT").getWidth();i<tempwidth;i++) newset.column("FINT").widen(); |
---|
516 | valD = obj->getIntegFlux(); |
---|
517 | if((fabs(valD) < 1.)// &&(valD>0.) |
---|
518 | ){ |
---|
519 | int minprec = int(fabs(log10(fabs(valD))))+2; |
---|
520 | for(int i=newset.column("FINT").getPrecision();i<minprec;i++) newset.column("FINT").upPrec(); |
---|
521 | } |
---|
522 | tempwidth = int( log10(fabs(valD)) + 1) + newset.column("FINT").getPrecision() + 2; |
---|
523 | if(valD<0) tempwidth++; |
---|
524 | for(int i=newset.column("FINT").getWidth();i<tempwidth;i++) newset.column("FINT").widen(); |
---|
525 | |
---|
526 | } |
---|
527 | |
---|
528 | // F_tot |
---|
529 | newset.column("FTOT").setUnits("[" + head.getFluxUnits() + "]"); |
---|
530 | tempwidth = newset.column("FTOT").getUnits().size() + 1; |
---|
531 | for(int i=newset.column("FTOT").getWidth();i<tempwidth;i++) newset.column("FTOT").widen(); |
---|
532 | val = obj->getTotalFlux(); |
---|
533 | // std::cerr << val << "\n"; |
---|
534 | if((fabs(val) < 1.)// &&(val>0.) |
---|
535 | ){ |
---|
536 | int minprec = int(fabs(log10(fabs(val))))+2; |
---|
537 | for(int i=newset.column("FTOT").getPrecision();i<minprec;i++) newset.column("FTOT").upPrec(); |
---|
538 | } |
---|
539 | tempwidth = int( log10(fabs(val)) + 1) + newset.column("FTOT").getPrecision() + 2; |
---|
540 | if(val<0) tempwidth++; |
---|
541 | for(int i=newset.column("FTOT").getWidth();i<tempwidth;i++) newset.column("FTOT").widen(); |
---|
542 | |
---|
543 | // F_peak |
---|
544 | newset.column("FPEAK").setUnits("[" + head.getFluxUnits() + "]"); |
---|
545 | tempwidth = newset.column("FPEAK").getUnits().size() + 1; |
---|
546 | for(int i=newset.column("FPEAK").getWidth();i<tempwidth;i++) newset.column("FPEAK").widen(); |
---|
547 | val = obj->getPeakFlux(); |
---|
548 | if((fabs(val) < 1.)// &&(val>0.) |
---|
549 | ){ |
---|
550 | int minprec = int(fabs(log10(fabs(val))))+2; |
---|
551 | for(int i=newset.column("FPEAK").getPrecision();i<minprec;i++) newset.column("FPEAK").upPrec(); |
---|
552 | } |
---|
553 | tempwidth = int( log10(fabs(val)) + 1) + newset.column("FPEAK").getPrecision() + 2; |
---|
554 | if(val<0) tempwidth++; |
---|
555 | for(int i=newset.column("FPEAK").getWidth();i<tempwidth;i++) newset.column("FPEAK").widen(); |
---|
556 | |
---|
557 | // S/N_peak |
---|
558 | val = obj->getPeakSNR(); |
---|
559 | if((fabs(val) < 1.)&&(val>0.)){ |
---|
560 | minval = pow(10, -1. * (newset.column("SNRPEAK").getPrecision()+1)); |
---|
561 | if(val < minval) newset.column("SNRPEAK").upPrec(); |
---|
562 | } |
---|
563 | tempwidth = int( log10(fabs(val)) + 1) + newset.column("SNRPEAK").getPrecision() +2; |
---|
564 | if(val<0) tempwidth++; |
---|
565 | for(int i=newset.column("SNRPEAK").getWidth();i<tempwidth;i++) newset.column("SNRPEAK").widen(); |
---|
566 | |
---|
567 | // X1 position |
---|
568 | val = obj->getXmin() + obj->getXOffset(); |
---|
569 | tempwidth = int( log10(val) + 1) + newset.column("X1").getPrecision() + 1; |
---|
570 | for(int i=newset.column("X1").getWidth();i<tempwidth;i++) newset.column("X1").widen(); |
---|
571 | // X2 position |
---|
572 | val = obj->getXmax() + obj->getXOffset(); |
---|
573 | tempwidth = int( log10(val) + 1) + newset.column("X2").getPrecision() + 1; |
---|
574 | for(int i=newset.column("X2").getWidth();i<tempwidth;i++) newset.column("X2").widen(); |
---|
575 | // Y1 position |
---|
576 | val = obj->getYmin() + obj->getYOffset(); |
---|
577 | tempwidth = int( log10(val) + 1) + newset.column("Y1").getPrecision() + 1; |
---|
578 | for(int i=newset.column("Y1").getWidth();i<tempwidth;i++) newset.column("Y1").widen(); |
---|
579 | // Y2 position |
---|
580 | val = obj->getYmax() + obj->getYOffset(); |
---|
581 | tempwidth = int( log10(val) + 1) + newset.column("Y2").getPrecision() + 1; |
---|
582 | for(int i=newset.column("Y2").getWidth();i<tempwidth;i++) newset.column("Y2").widen(); |
---|
583 | // Z1 position |
---|
584 | val = obj->getZmin() + obj->getZOffset(); |
---|
585 | tempwidth = int( log10(val) + 1) + newset.column("Z1").getPrecision() + 1; |
---|
586 | for(int i=newset.column("Z1").getWidth();i<tempwidth;i++) newset.column("Z1").widen(); |
---|
587 | // Z2 position |
---|
588 | val = obj->getZmax() + obj->getZOffset(); |
---|
589 | tempwidth = int( log10(val) + 1) + newset.column("Z2").getPrecision() + 1; |
---|
590 | for(int i=newset.column("Z2").getWidth();i<tempwidth;i++) newset.column("Z2").widen(); |
---|
591 | |
---|
592 | // Npix |
---|
593 | tempwidth = int( log10(obj->getSize()) + 1) + |
---|
594 | newset.column("NPIX").getPrecision() + 1; |
---|
595 | for(int i=newset.column("NPIX").getWidth();i<tempwidth;i++) newset.column("NPIX").widen(); |
---|
596 | |
---|
597 | // average X position |
---|
598 | val = obj->getXaverage() + obj->getXOffset(); |
---|
599 | if((val<1.)&&(val>0.)){ |
---|
600 | minval = pow(10, -1. * (newset.column("XAV").getPrecision()+1)); |
---|
601 | if(val < minval) newset.column("XAV").upPrec(); |
---|
602 | } |
---|
603 | tempwidth = int( log10(val) + 1) + newset.column("XAV").getPrecision() + 2; |
---|
604 | for(int i=newset.column("XAV").getWidth();i<tempwidth;i++) newset.column("XAV").widen(); |
---|
605 | // average Y position |
---|
606 | val = obj->getYaverage() + obj->getYOffset(); |
---|
607 | if((val<1.)&&(val>0.)){ |
---|
608 | minval = pow(10, -1. * (newset.column("YAV").getPrecision()+1)); |
---|
609 | if(val < minval) newset.column("YAV").upPrec(); |
---|
610 | } |
---|
611 | tempwidth = int( log10(val) + 1) + newset.column("YAV").getPrecision() + 2; |
---|
612 | for(int i=newset.column("YAV").getWidth();i<tempwidth;i++) newset.column("YAV").widen(); |
---|
613 | // average Z position |
---|
614 | val = obj->getZaverage() + obj->getZOffset(); |
---|
615 | if((val<1.)&&(val>0.)){ |
---|
616 | minval = pow(10, -1. * (newset.column("ZAV").getPrecision()+1)); |
---|
617 | if((val>0.)&&(val < minval)) newset.column("ZAV").upPrec(); |
---|
618 | } |
---|
619 | tempwidth = int( log10(val) + 1) + newset.column("ZAV").getPrecision() + 2; |
---|
620 | for(int i=newset.column("ZAV").getWidth();i<tempwidth;i++) newset.column("ZAV").widen(); |
---|
621 | |
---|
622 | // X position of centroid |
---|
623 | val = obj->getXCentroid() + obj->getXOffset(); |
---|
624 | if((val<1.)&&(val>0.)){ |
---|
625 | minval = pow(10, -1. * (newset.column("XCENT").getPrecision()+1)); |
---|
626 | if(val < minval) newset.column("XCENT").upPrec(); |
---|
627 | } |
---|
628 | tempwidth = int( log10(val) + 1) + newset.column("XCENT").getPrecision() + 2; |
---|
629 | for(int i=newset.column("XCENT").getWidth();i<tempwidth;i++) newset.column("XCENT").widen(); |
---|
630 | // Y position of centroid |
---|
631 | val = obj->getYCentroid() + obj->getYOffset(); |
---|
632 | if((val<1.)&&(val>0.)){ |
---|
633 | minval = pow(10, -1. * (newset.column("YCENT").getPrecision()+1)); |
---|
634 | if(val < minval) newset.column("YCENT").upPrec(); |
---|
635 | } |
---|
636 | tempwidth = int( log10(val) + 1) + newset.column("YCENT").getPrecision() + 2; |
---|
637 | for(int i=newset.column("YCENT").getWidth();i<tempwidth;i++) newset.column("YCENT").widen(); |
---|
638 | // Z position of centroid |
---|
639 | val = obj->getZCentroid() + obj->getZOffset(); |
---|
640 | if((val<1.)&&(val>0.)){ |
---|
641 | minval = pow(10, -1. * (newset.column("ZCENT").getPrecision()+1)); |
---|
642 | if((val>0.)&&(val < minval)) newset.column("ZCENT").upPrec(); |
---|
643 | } |
---|
644 | tempwidth = int( log10(val) + 1) + newset.column("ZCENT").getPrecision() + 2; |
---|
645 | for(int i=newset.column("ZCENT").getWidth();i<tempwidth;i++) newset.column("ZCENT").widen(); |
---|
646 | |
---|
647 | // X position of peak flux |
---|
648 | val = obj->getXPeak() + obj->getXOffset(); |
---|
649 | if((val<1.)&&(val>0.)){ |
---|
650 | minval = pow(10, -1. * (newset.column("XPEAK").getPrecision()+1)); |
---|
651 | if(val < minval) newset.column("XPEAK").upPrec(); |
---|
652 | } |
---|
653 | tempwidth = int( log10(val) + 1) + newset.column("XPEAK").getPrecision() + 2; |
---|
654 | for(int i=newset.column("XPEAK").getWidth();i<tempwidth;i++) newset.column("XPEAK").widen(); |
---|
655 | // Y position of peak flux |
---|
656 | val = obj->getYPeak() + obj->getYOffset(); |
---|
657 | if((val<1.)&&(val>0.)){ |
---|
658 | minval = pow(10, -1. * (newset.column("YPEAK").getPrecision()+1)); |
---|
659 | if(val < minval) newset.column("YPEAK").upPrec(); |
---|
660 | } |
---|
661 | tempwidth = int( log10(val) + 1) + newset.column("YPEAK").getPrecision() + 2; |
---|
662 | for(int i=newset.column("YPEAK").getWidth();i<tempwidth;i++) newset.column("YPEAK").widen(); |
---|
663 | // Z position of peak flux |
---|
664 | val = obj->getZPeak() + obj->getZOffset(); |
---|
665 | if((val<1.)&&(val>0.)){ |
---|
666 | minval = pow(10, -1. * (newset.column("ZPEAK").getPrecision()+1)); |
---|
667 | if((val>0.)&&(val < minval)) newset.column("ZPEAK").upPrec(); |
---|
668 | } |
---|
669 | tempwidth = int( log10(val) + 1) + newset.column("ZPEAK").getPrecision() + 2; |
---|
670 | for(int i=newset.column("ZPEAK").getWidth();i<tempwidth;i++) newset.column("ZPEAK").widen(); |
---|
671 | |
---|
672 | //Number of contiguous channels |
---|
673 | tempwidth = int( log10(obj->getMaxAdjacentChannels()) + 1) + |
---|
674 | newset.column("NUMCH").getPrecision() + 1; |
---|
675 | for(int i=newset.column("NUMCH").getWidth();i<tempwidth;i++) newset.column("NUMCH").widen(); |
---|
676 | //Spatial size |
---|
677 | tempwidth = int( log10(obj->getSpatialSize()) + 1) + |
---|
678 | newset.column("SPATSIZE").getPrecision() + 1; |
---|
679 | for(int i=newset.column("SPATSIZE").getWidth();i<tempwidth;i++) newset.column("SPATSIZE").widen(); |
---|
680 | |
---|
681 | } |
---|
682 | |
---|
683 | return newset; |
---|
684 | |
---|
685 | } |
---|
686 | |
---|
687 | } |
---|
688 | |
---|
689 | } |
---|