\documentclass[12pt,a4paper]{article}
%\documentclass[12pt,a4paper]{report}

%%%%%% LINE SPACING %%%%%%%%%%%%
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\singlespacing
%\onehalfspacing
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%Define a test for doing PDF format -- use different code below
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\fi

\textwidth=165 mm
\textheight=245 mm
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\oddsidemargin=0 mm
\parindent=6 mm

\usepackage[sort]{natbib}
\usepackage{lscape}
\bibpunct[,]{(}{)}{;}{a}{}{,}

%\newcommand{\secA}{\chapter}
%\newcommand{\secB}{\section}
%\newcommand{\secC}{\subsection}

\newcommand{\secA}{\section}
\newcommand{\secB}{\subsection}
\newcommand{\secC}{\subsubsection}


\newcommand{\eg}{e.g.\ }
\newcommand{\ie}{i.e.\ }
\newcommand{\hi}{H\textsc{i}}
\newcommand{\hipass}{\textsc{hipass}}
\newcommand{\duchamp}{\emph{Duchamp}}
\newcommand{\atrous}{\textit{{\`a} trous}}
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%%%%%%% FANCY HEADINGS %%%%%%%%%%
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%                {\markright{\thesection\ #1}}
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%      {\fancyplain{}{\bfseries\rightmark}}
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%      {\fancyplain{}{\bfseries\thepage}}
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% If we are creating a PDF, use different options for graphicx, hyperref.
\ifPDF
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  \usepackage[pdftex,bookmarks]{hyperref}
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              citecolor=red,%
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\else
  \usepackage[dvips]{graphicx} 
  \usepackage[dvips]{hyperref} 
\fi

\pagestyle{headings}
\begin{document}

\ifPDF
\pdfbookmark[2]{Title Page}{title}
\fi
\newlength{\centreoff}
\setlength{\centreoff}{-0.5\oddsidemargin}
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\thispagestyle{empty}
\vspace*{\stretch{1}}
\noindent\hspace*{\centreoff}%
\makebox[0pt][l]{\begin{minipage}{\textwidth}
\flushright
{\Huge\bfseries Source Detection with \duchamp\\%
A User's Guide

}
\noindent\rule[-1ex]{\textwidth}{3pt}
\end{minipage}}

\vspace{\stretch{1}}
\noindent\hspace*{\centreoff}%
\makebox[0pt][l]{\begin{minipage}{\textwidth}
\flushright
{\bfseries 
Matthew Whiting\\
Australia Telescope National Facility\\
CSIRO\\[3ex]} 
Duchamp version~1.06\\
November 1, 2006
\end{minipage}}

\begin{figure}[!h]
%\begin{center}
\includegraphics[width=\textwidth]{cover_image}
%\end{center}
\end{figure}

%\newpage
\ifPDF
\pdfbookmark[2]{Contents}{contents}
\fi
\tableofcontents

\newpage
\input{intro} %Introduction and getting going quickly
\newpage
\input{userInputs} %User Inputs
\newpage
\input{executionFlow} %What \duchamp\ is doing
\newpage
\input{outputs} %Outputs
\newpage
\input{hints} %Notes and hints on the use of \duchamp
\newpage
\input{future} %Future developments

%\bibliographystyle{plainnat}
%\bibliographystyle{mn2e}
%\bibliography{guide}

\newpage
\ifPDF
\pdfbookmark[1]{References}{references}
\fi
\ifPDF
\input{Guide-URL-bib}
\else
\input{Guide-noURL-bib}
\fi

\appendix
\newpage
\input{app-install} %Obtaining and installing \duchamp
\newpage
\input{app-param} %Available parameters
\newpage
\input{app-paramEx} %Example parameter files

\input{app-resultsEx} %Example results files

\input{app-VOTable} %Example VOTable output

\input{app-Karma} %Example Karma annotation file output
\newpage
\input{app-stats} %Robust statistics for a Normal distribution

\input{app-waveletNoise} %How Gaussian noise changes with wavelet scale


\end{document}