[3] | 1 | #include <iostream> |
---|
| 2 | #include <sstream> |
---|
| 3 | #include <fstream> |
---|
| 4 | #include <iomanip> |
---|
| 5 | #include <string> |
---|
[93] | 6 | #include <vector> |
---|
[3] | 7 | #include <stdio.h> |
---|
[90] | 8 | #include <param.hh> |
---|
[93] | 9 | #include <Detection/detection.hh> |
---|
[3] | 10 | #include <Cubes/cubes.hh> |
---|
| 11 | #include <Utils/utils.hh> |
---|
[93] | 12 | #include <Detection/columns.hh> |
---|
[3] | 13 | |
---|
| 14 | using std::endl; |
---|
[93] | 15 | using std::setw; |
---|
[3] | 16 | using std::setfill; |
---|
| 17 | using std::setprecision; |
---|
[93] | 18 | |
---|
| 19 | using namespace Column; |
---|
[3] | 20 | |
---|
[93] | 21 | void outputDetectionTextWCSHeader(std::ostream &stream, ColSet columns) |
---|
[3] | 22 | { |
---|
| 23 | /** |
---|
| 24 | * outputDetectionTextWCSHeader |
---|
| 25 | * Prints to a stream the column headers to match the output generated by outputDetectionTextWCS |
---|
| 26 | */ |
---|
| 27 | |
---|
[93] | 28 | stream << setfill(' '); |
---|
[95] | 29 | for(int i=0;i<columns.vec.size();i++) columns.vec[i].dash(stream); |
---|
| 30 | stream << endl; |
---|
[93] | 31 | for(int i=0;i<columns.vec.size();i++) columns.vec[i].title(stream); |
---|
| 32 | stream << endl; |
---|
| 33 | for(int i=0;i<columns.vec.size();i++) columns.vec[i].units(stream); |
---|
| 34 | stream << endl; |
---|
| 35 | for(int i=0;i<columns.vec.size();i++) columns.vec[i].dash(stream); |
---|
| 36 | stream << endl; |
---|
| 37 | |
---|
[3] | 38 | } |
---|
| 39 | |
---|
[93] | 40 | void Detection::outputDetectionTextWCS(std::ostream &stream, ColSet columns) |
---|
[3] | 41 | { |
---|
| 42 | /** |
---|
[93] | 43 | * outputDetectionTextWCS |
---|
| 44 | * Prints to a stream the relevant details of a detected object, |
---|
| 45 | * including the WCS parameters, which need to have been calculated. |
---|
| 46 | * If they have not (given by the isWCS() function), then the |
---|
| 47 | * WCS-related outputs are left blank. |
---|
[3] | 48 | */ |
---|
| 49 | |
---|
| 50 | stream.setf(std::ios::fixed); |
---|
[93] | 51 | columns.vec[0].entry(stream,this->id); |
---|
| 52 | columns.vec[1].entry(stream,this->name); |
---|
| 53 | stream << setprecision(xyzPrec); |
---|
| 54 | columns.vec[2].entry(stream,this->xcentre + this->xSubOffset); |
---|
| 55 | columns.vec[3].entry(stream,this->ycentre + this->ySubOffset); |
---|
| 56 | columns.vec[4].entry(stream,this->zcentre + this->zSubOffset); |
---|
| 57 | if(this->flagWCS){ |
---|
| 58 | columns.vec[5].entry(stream,this->raS); |
---|
| 59 | columns.vec[6].entry(stream,this->decS); |
---|
| 60 | stream << setprecision(velPrec); |
---|
| 61 | columns.vec[7].entry(stream,this->vel); |
---|
[95] | 62 | stream << setprecision(wposPrec); |
---|
[93] | 63 | columns.vec[8].entry(stream,this->raWidth); |
---|
| 64 | columns.vec[9].entry(stream,this->decWidth); |
---|
| 65 | stream << setprecision(velPrec); |
---|
| 66 | columns.vec[10].entry(stream,this->velWidth); |
---|
| 67 | } |
---|
| 68 | else for(int i=5;i<11;i++) columns.vec[i].blank(stream); |
---|
| 69 | stream << setprecision(fluxPrec); |
---|
| 70 | if(this->flagWCS) columns.vec[11].entry(stream,this->intFlux); |
---|
| 71 | else columns.vec[11].entry(stream,this->totalFlux); |
---|
| 72 | columns.vec[12].entry(stream,this->peakFlux); |
---|
| 73 | columns.vec[13].entry(stream,this->xmin + this->xSubOffset); |
---|
| 74 | columns.vec[14].entry(stream,this->xmax + this->xSubOffset); |
---|
| 75 | columns.vec[15].entry(stream,this->ymin + this->ySubOffset); |
---|
| 76 | columns.vec[16].entry(stream,this->ymax + this->ySubOffset); |
---|
| 77 | columns.vec[17].entry(stream,this->zmin + this->zSubOffset); |
---|
| 78 | columns.vec[18].entry(stream,this->zmax + this->zSubOffset); |
---|
| 79 | columns.vec[19].entry(stream,int(this->pix.size())); |
---|
| 80 | columns.vec[20].entry(stream,this->flagText); |
---|
| 81 | stream << endl; |
---|
[3] | 82 | |
---|
| 83 | } |
---|
| 84 | |
---|
[93] | 85 | void outputDetectionTextHeader(std::ostream &stream, ColSet columns) |
---|
[3] | 86 | { |
---|
| 87 | /** |
---|
| 88 | * outputDetectionTextHeader |
---|
| 89 | * Prints to a stream the column headers to match the output generated by outputDetectionText |
---|
| 90 | */ |
---|
| 91 | |
---|
[93] | 92 | stream << setfill(' '); |
---|
[95] | 93 | for(int i=0;i<columns.vec.size();i++) columns.vec[i].dash(stream); |
---|
| 94 | stream << endl; |
---|
[93] | 95 | for(int i=0;i<columns.vec.size();i++) columns.vec[i].title(stream); |
---|
| 96 | stream << endl; |
---|
| 97 | for(int i=0;i<columns.vec.size();i++) columns.vec[i].units(stream); |
---|
| 98 | stream << endl; |
---|
| 99 | for(int i=0;i<columns.vec.size();i++) columns.vec[i].dash(stream); |
---|
| 100 | stream << endl; |
---|
[3] | 101 | } |
---|
| 102 | |
---|
[93] | 103 | void Detection::outputDetectionText(std::ostream &stream, ColSet columns, int idNumber) |
---|
[3] | 104 | { |
---|
| 105 | /** |
---|
| 106 | * outputDetectionText |
---|
[93] | 107 | * Print to a stream the relevant details of a detected object. |
---|
| 108 | * This does not include any WCS parameters, only pixel positions & extent, |
---|
| 109 | * and flux info. |
---|
[3] | 110 | * Also prints a counter, provided as an input. |
---|
| 111 | */ |
---|
| 112 | |
---|
[93] | 113 | stream << setfill(' '); |
---|
| 114 | stream.setf(std::ios::fixed); |
---|
| 115 | columns.vec[0].entry(stream,idNumber); |
---|
| 116 | stream << setprecision(xyzPrec); |
---|
| 117 | columns.vec[1].entry(stream,this->xcentre + this->xSubOffset); |
---|
| 118 | columns.vec[2].entry(stream,this->ycentre + this->ySubOffset); |
---|
| 119 | columns.vec[3].entry(stream,this->zcentre + this->zSubOffset); |
---|
| 120 | stream << setprecision(fluxPrec); |
---|
| 121 | columns.vec[4].entry(stream,this->totalFlux); |
---|
| 122 | columns.vec[5].entry(stream,this->peakFlux); |
---|
| 123 | columns.vec[6].entry(stream,this->xmin + this->xSubOffset); |
---|
| 124 | columns.vec[7].entry(stream,this->xmax + this->xSubOffset); |
---|
| 125 | columns.vec[8].entry(stream,this->ymin + this->ySubOffset); |
---|
| 126 | columns.vec[9].entry(stream,this->ymax + this->ySubOffset); |
---|
| 127 | columns.vec[10].entry(stream,this->zmin + this->zSubOffset); |
---|
| 128 | columns.vec[11].entry(stream,this->zmax + this->zSubOffset); |
---|
| 129 | columns.vec[12].entry(stream,int(this->pix.size())); |
---|
| 130 | stream<<endl; |
---|
[3] | 131 | |
---|
| 132 | } |
---|
| 133 | |
---|
| 134 | string Detection::outputLabelWCS() |
---|
| 135 | { |
---|
| 136 | |
---|
| 137 | std::stringstream ss; |
---|
| 138 | ss << "#" << setfill('0') << setw(3) << this->id << ": "; |
---|
[87] | 139 | ss << this->name ; |
---|
| 140 | if(this->getFlagText()!="") |
---|
| 141 | ss << " [" << this->getFlagText() << "] "; |
---|
| 142 | else ss<< " "; |
---|
[3] | 143 | ss << setfill(' '); |
---|
| 144 | ss << this->raS << ", "; |
---|
| 145 | ss << this->decS; |
---|
| 146 | ss << setprecision(3); |
---|
| 147 | ss.setf(std::ios::fixed); |
---|
[91] | 148 | ss << ", " << this->vel << " " << this->specUnits; |
---|
[3] | 149 | |
---|
| 150 | return ss.str(); |
---|
| 151 | |
---|
| 152 | |
---|
| 153 | } |
---|
| 154 | |
---|
| 155 | |
---|
[90] | 156 | string Detection::outputLabelInfo() |
---|
| 157 | { |
---|
| 158 | /** |
---|
| 159 | * outputLabelInfo |
---|
| 160 | * Prints to a string the widths of the object (in position and velocity), |
---|
| 161 | * as well as the flux information. |
---|
| 162 | * Assumes the WCS parameters of the object have been calculated. |
---|
| 163 | * If they have not (given by the isWCS() function), then the WCS-related outputs |
---|
| 164 | * are left blank. |
---|
| 165 | * Returns the string. |
---|
| 166 | */ |
---|
| 167 | |
---|
| 168 | std::stringstream ss; |
---|
| 169 | ss.setf(std::ios::fixed); |
---|
| 170 | if(this->flagWCS){ |
---|
| 171 | ss << setprecision(2); |
---|
| 172 | ss << "w_" << this->lngtype <<"=" << this->raWidth; |
---|
| 173 | ss << ", w_" << this->lattype <<"=" << this->decWidth; |
---|
| 174 | ss << setprecision(3); |
---|
[91] | 175 | ss << ", w_Vel=" << this->velWidth << " " << this->specUnits; |
---|
| 176 | ss << ", F\\dint\\u=" << this->intFlux << " " << this->intFluxUnits; |
---|
| 177 | ss << ", F\\dpeak\\u=" << this->peakFlux << " " << this->fluxUnits; |
---|
[90] | 178 | } |
---|
| 179 | else{ |
---|
| 180 | ss << "#" << setfill('0') << setw(3) << this->id << ": "; |
---|
| 181 | ss << setprecision(3); |
---|
| 182 | ss << "F\\dtot\\u=" << this->totalFlux << this->fluxUnits; |
---|
| 183 | ss << ", F\\dpeak\\u=" << this->peakFlux << this->fluxUnits; |
---|
| 184 | } |
---|
| 185 | string output = ss.str(); |
---|
| 186 | |
---|
| 187 | return output; |
---|
| 188 | } |
---|
| 189 | |
---|
| 190 | |
---|
[3] | 191 | string Detection::outputLabelPix() |
---|
| 192 | { |
---|
| 193 | /** |
---|
| 194 | * outputLabelPix |
---|
| 195 | * Prints to a string the pixel centres and extents of a detected object. |
---|
| 196 | * Returns the string. |
---|
| 197 | */ |
---|
| 198 | |
---|
| 199 | std::stringstream ss; |
---|
| 200 | ss.setf(std::ios::fixed); |
---|
[86] | 201 | // // This is the OLD code -- have improved the formatting below... |
---|
[75] | 202 | // ss << this->pix.size() << " Voxels: "; |
---|
| 203 | // ss << setprecision(1) << setfill(' '); |
---|
| 204 | // ss <<setw(5)<< this->xcentre + this->xSubOffset; |
---|
| 205 | // ss <<" " <<setw(5)<< this->ycentre + this->ySubOffset; |
---|
| 206 | // ss <<" " <<setw(5)<< this->zcentre + this->zSubOffset; |
---|
| 207 | // ss <<" ["<<setw(3)<< this->xmin + this->xSubOffset <<":"<< this->xmax + this->xSubOffset; |
---|
| 208 | // ss <<", "<<setw(3)<< this->ymin + this->ySubOffset <<":"<< this->ymax + this->ySubOffset; |
---|
| 209 | // ss <<", "<<setw(3)<< this->zmin + this->zSubOffset <<":"<< this->zmax + this->zSubOffset << "]"; |
---|
| 210 | ss << "Centre: "; |
---|
[3] | 211 | ss << setprecision(1) << setfill(' '); |
---|
[88] | 212 | ss <<"(" << this->xcentre + this->xSubOffset; |
---|
[75] | 213 | ss <<", " << this->ycentre + this->ySubOffset; |
---|
| 214 | ss <<", " << this->zcentre + this->zSubOffset << ")"; |
---|
[88] | 215 | ss <<", Size: " << this->pix.size() << " voxels, "; |
---|
| 216 | ss <<"Range: ["<< this->xmin + this->xSubOffset <<":"<< this->xmax + this->xSubOffset; |
---|
| 217 | ss <<", " << this->ymin + this->ySubOffset <<":"<< this->ymax + this->ySubOffset; |
---|
| 218 | ss <<", " << this->zmin + this->zSubOffset <<":"<< this->zmax + this->zSubOffset << "]"; |
---|
[3] | 219 | |
---|
| 220 | return ss.str(); |
---|
| 221 | } |
---|
| 222 | |
---|
| 223 | |
---|