1 | CFLAGS = -O2 -ftree-vectorize -fPIC |
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2 | |
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3 | FFLAGS = -fast -O4 |
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4 | |
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5 | CC = @CC@ $(CFLAGS) |
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6 | CXX = @CXX@ $(CFLAGS) |
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7 | F77= @F77@ $(FFLAGS) |
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8 | LINK= @LINKER@ |
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9 | |
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10 | BASE = ./src |
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11 | |
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12 | INSTALLDIR = @prefix@/bin |
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13 | LIBDIR = @prefix@/lib |
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14 | INCDIR = @prefix@/include/duchamp |
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15 | |
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16 | V = @PACKAGE_VERSION@ |
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17 | EXEC = Duchamp-$(V) |
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18 | EXEC-STUB = Duchamp |
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19 | |
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20 | AR = ar cq |
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21 | LIB = libduchamp-$(V).a |
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22 | LIB_LN = libduchamp.a |
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23 | RANLIB = ranlib |
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24 | SHAREDLIB = @SHRLD@ |
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25 | #SHAREDFLAGS = -shared -Wl,-soname,@SHRLIB@ |
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26 | LIBSO = @SHRLIB@ |
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27 | LIBSO_LN = @SHRLN@ |
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28 | |
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29 | INSTALL = @INSTALL@ |
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30 | LN_S = @LN_S@ |
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31 | |
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32 | PGPLOTINC = @PGPLOTINC@ |
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33 | PGPLOTLIB = @PGPLOTLIB@ |
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34 | |
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35 | CFITSIOINC = @CFITSIOINC@ |
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36 | CFITSIOLIB = @CFITSIOLIB@ |
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37 | |
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38 | WCSINC = @WCSINC@ |
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39 | WCSLIB = @WCSLIB@ |
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40 | |
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41 | CINC = -I$(BASE) $(PGPLOTINC) $(WCSINC) $(CFITSIOINC) |
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42 | |
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43 | LIBS = $(WCSLIB) $(CFITSIOLIB) $(PGPLOTLIB) |
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44 | |
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45 | ATROUSDIR = $(BASE)/ATrous |
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46 | PIXELMAPDIR = $(BASE)/PixelMap |
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47 | DETECTIONDIR = $(BASE)/Detection |
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48 | CUBESDIR = $(BASE)/Cubes |
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49 | FITSIODIR = $(BASE)/FitsIO |
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50 | PLOTDIR = $(BASE)/Plotting |
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51 | UTILDIR = $(BASE)/Utils |
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52 | OUTPUTSDIR = $(BASE)/Outputs |
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53 | TESTDIR = ./verification |
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54 | |
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55 | HEADS = $(BASE)/config.h\ |
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56 | $(BASE)/duchamp.hh\ |
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57 | $(BASE)/pgheader.hh\ |
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58 | $(BASE)/param.hh\ |
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59 | $(BASE)/fitsHeader.hh\ |
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60 | $(PIXELMAPDIR)/Line.hh\ |
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61 | $(PIXELMAPDIR)/Voxel.hh\ |
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62 | $(PIXELMAPDIR)/Scan.hh\ |
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63 | $(PIXELMAPDIR)/Object2D.hh\ |
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64 | $(PIXELMAPDIR)/Object3D.hh\ |
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65 | $(ATROUSDIR)/atrous.hh\ |
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66 | $(ATROUSDIR)/filter.hh\ |
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67 | $(ATROUSDIR)/B3SplineFilter.hh\ |
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68 | $(ATROUSDIR)/TriangleFilter.hh\ |
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69 | $(ATROUSDIR)/HaarFilter.hh\ |
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70 | $(ATROUSDIR)/FilterFactory.hh\ |
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71 | $(DETECTIONDIR)/detection.hh\ |
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72 | $(DETECTIONDIR)/finders.hh\ |
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73 | $(DETECTIONDIR)/ObjectGrower.hh\ |
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74 | $(DETECTIONDIR)/OptimisedGrower.hh\ |
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75 | $(CUBESDIR)/cubes.hh\ |
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76 | $(FITSIODIR)/Beam.hh\ |
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77 | $(FITSIODIR)/DuchampBeam.hh\ |
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78 | $(FITSIODIR)/ReadExisting.hh\ |
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79 | $(FITSIODIR)/ReadExistingRecon.hh\ |
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80 | $(FITSIODIR)/ReadExistingSmooth.hh\ |
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81 | $(FITSIODIR)/WriteArray.hh\ |
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82 | $(FITSIODIR)/WriteBaselineArray.hh\ |
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83 | $(FITSIODIR)/WriteMaskArray.hh\ |
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84 | $(FITSIODIR)/WriteMomentMapArray.hh\ |
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85 | $(FITSIODIR)/WriteMomentMaskArray.hh\ |
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86 | $(FITSIODIR)/WriteReconArray.hh\ |
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87 | $(FITSIODIR)/WriteSmoothArray.hh\ |
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88 | $(PLOTDIR)/DuchampPlot.hh\ |
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89 | $(PLOTDIR)/MultipleDuchampPlot.hh\ |
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90 | $(PLOTDIR)/ImagePlot.hh\ |
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91 | $(PLOTDIR)/SpectralPlot.hh\ |
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92 | $(PLOTDIR)/SimpleSpectralPlot.hh\ |
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93 | $(PLOTDIR)/CutoutPlot.hh\ |
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94 | $(UTILDIR)/Hanning.hh\ |
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95 | $(UTILDIR)/GaussSmooth1D.hh\ |
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96 | $(UTILDIR)/GaussSmooth2D.hh\ |
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97 | $(UTILDIR)/Section.hh\ |
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98 | $(UTILDIR)/Statistics.hh\ |
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99 | $(UTILDIR)/utils.hh\ |
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100 | $(UTILDIR)/feedback.hh\ |
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101 | $(UTILDIR)/mycpgplot.hh\ |
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102 | $(UTILDIR)/VOField.hh\ |
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103 | $(UTILDIR)/VOParam.hh\ |
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104 | $(OUTPUTSDIR)/columns.hh\ |
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105 | $(OUTPUTSDIR)/CatalogueSpecification.hh\ |
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106 | $(OUTPUTSDIR)/CatalogueWriter.hh\ |
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107 | $(OUTPUTSDIR)/FileCatalogueWriter.hh\ |
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108 | $(OUTPUTSDIR)/ASCIICatalogueWriter.hh\ |
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109 | $(OUTPUTSDIR)/VOTableCatalogueWriter.hh\ |
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110 | $(OUTPUTSDIR)/AnnotationWriter.hh\ |
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111 | $(OUTPUTSDIR)/KarmaAnnotationWriter.hh\ |
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112 | $(OUTPUTSDIR)/DS9AnnotationWriter.hh\ |
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113 | $(OUTPUTSDIR)/CasaAnnotationWriter.hh |
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114 | |
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115 | OBJECTS-NOPG = $(BASE)/mainDuchamp.o \ |
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116 | $(BASE)/duchamp.o\ |
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117 | $(BASE)/param.o\ |
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118 | $(BASE)/fitsHeader.o\ |
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119 | $(PIXELMAPDIR)/Line.o\ |
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120 | $(PIXELMAPDIR)/Voxel.o\ |
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121 | $(PIXELMAPDIR)/Scan.o\ |
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122 | $(PIXELMAPDIR)/Object2D.o\ |
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123 | $(PIXELMAPDIR)/Object3D.o\ |
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124 | $(ATROUSDIR)/filter.o\ |
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125 | $(ATROUSDIR)/B3SplineFilter.o\ |
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126 | $(ATROUSDIR)/TriangleFilter.o\ |
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127 | $(ATROUSDIR)/HaarFilter.o\ |
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128 | $(ATROUSDIR)/FilterFactory.o\ |
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129 | $(ATROUSDIR)/atrous_1d_reconstruct.o\ |
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130 | $(ATROUSDIR)/atrous_2d_reconstruct.o\ |
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131 | $(ATROUSDIR)/atrous_3d_reconstruct.o\ |
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132 | $(ATROUSDIR)/baselineSubtract.o\ |
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133 | $(ATROUSDIR)/ReconSearch.o\ |
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134 | $(DETECTIONDIR)/detection.o\ |
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135 | $(DETECTIONDIR)/ObjectGrower.o\ |
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136 | $(DETECTIONDIR)/OptimisedGrower.o\ |
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137 | $(DETECTIONDIR)/areClose.o\ |
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138 | $(DETECTIONDIR)/lutz_detect.o\ |
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139 | $(DETECTIONDIR)/mergeIntoList.o\ |
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140 | $(DETECTIONDIR)/outputDetection.o\ |
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141 | $(DETECTIONDIR)/sorting.o\ |
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142 | $(DETECTIONDIR)/spectrumDetect.o\ |
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143 | $(CUBESDIR)/cubes.o\ |
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144 | $(CUBESDIR)/cubes_extended.o\ |
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145 | $(CUBESDIR)/baseline.o\ |
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146 | $(CUBESDIR)/CubicSearch.o\ |
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147 | $(CUBESDIR)/detectionIO.o\ |
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148 | $(CUBESDIR)/existingDetections.o\ |
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149 | $(CUBESDIR)/getImage.o\ |
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150 | $(CUBESDIR)/invertCube.o\ |
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151 | $(CUBESDIR)/Merger.o\ |
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152 | $(CUBESDIR)/momentMap.o\ |
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153 | $(CUBESDIR)/smoothCube.o\ |
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154 | $(CUBESDIR)/spectraUtils.o\ |
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155 | $(CUBESDIR)/trimImage.o\ |
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156 | $(FITSIODIR)/Beam.o\ |
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157 | $(FITSIODIR)/DuchampBeam.o\ |
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158 | $(FITSIODIR)/ReadExisting.o\ |
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159 | $(FITSIODIR)/ReadExistingRecon.o\ |
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160 | $(FITSIODIR)/ReadExistingSmooth.o\ |
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161 | $(FITSIODIR)/WriteArray.o\ |
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162 | $(FITSIODIR)/WriteBaselineArray.o\ |
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163 | $(FITSIODIR)/WriteMaskArray.o\ |
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164 | $(FITSIODIR)/WriteMomentMapArray.o\ |
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165 | $(FITSIODIR)/WriteMomentMaskArray.o\ |
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166 | $(FITSIODIR)/WriteReconArray.o\ |
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167 | $(FITSIODIR)/WriteSmoothArray.o\ |
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168 | $(FITSIODIR)/dataIO.o\ |
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169 | $(FITSIODIR)/headerIO.o\ |
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170 | $(FITSIODIR)/subsection.o\ |
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171 | $(FITSIODIR)/wcsIO.o\ |
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172 | $(UTILDIR)/Section.o\ |
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173 | $(UTILDIR)/Statistics.o\ |
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174 | $(UTILDIR)/feedback.o\ |
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175 | $(UTILDIR)/GaussSmooth1D.o\ |
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176 | $(UTILDIR)/Hanning.o\ |
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177 | $(UTILDIR)/VOField.o\ |
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178 | $(UTILDIR)/VOParam.o\ |
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179 | $(UTILDIR)/getStats.o\ |
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180 | $(UTILDIR)/getNormalStats.o\ |
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181 | $(UTILDIR)/getRobustStats.o\ |
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182 | $(UTILDIR)/linear_regression.o\ |
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183 | $(UTILDIR)/medianBaseline.o\ |
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184 | $(UTILDIR)/position_related.o\ |
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185 | $(UTILDIR)/sort.o\ |
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186 | $(UTILDIR)/string_related.o\ |
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187 | $(UTILDIR)/wcsFunctions.o\ |
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188 | $(UTILDIR)/zscale.o\ |
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189 | $(OUTPUTSDIR)/columns.o\ |
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190 | $(OUTPUTSDIR)/CatalogueSpecification.o\ |
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191 | $(OUTPUTSDIR)/CatalogueWriter.o\ |
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192 | $(OUTPUTSDIR)/FileCatalogueWriter.o\ |
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193 | $(OUTPUTSDIR)/ASCIICatalogueWriter.o\ |
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194 | $(OUTPUTSDIR)/VOTableCatalogueWriter.o\ |
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195 | $(OUTPUTSDIR)/AnnotationWriter.o\ |
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196 | $(OUTPUTSDIR)/KarmaAnnotationWriter.o\ |
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197 | $(OUTPUTSDIR)/DS9AnnotationWriter.o\ |
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198 | $(OUTPUTSDIR)/CasaAnnotationWriter.o |
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199 | |
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200 | ifeq ($(strip $(PGPLOTLIB)),) |
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201 | OBJECTS = $(OBJECTS-NOPG) |
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202 | else |
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203 | OBJECTS = $(OBJECTS-NOPG)\ |
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204 | $(CUBESDIR)/drawBlankEdges.o\ |
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205 | $(CUBESDIR)/drawMomentCutout.o\ |
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206 | $(CUBESDIR)/outputSpectra.o\ |
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207 | $(CUBESDIR)/plotting.o\ |
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208 | $(DETECTIONDIR)/drawBorders.o\ |
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209 | $(PLOTDIR)/DuchampPlot.o\ |
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210 | $(PLOTDIR)/MultipleDuchampPlot.o\ |
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211 | $(PLOTDIR)/ImagePlot.o\ |
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212 | $(PLOTDIR)/SpectralPlot.o\ |
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213 | $(PLOTDIR)/SimpleSpectralPlot.o\ |
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214 | $(PLOTDIR)/CutoutPlot.o\ |
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215 | $(UTILDIR)/mycpgplot.o\ |
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216 | $(UTILDIR)/PlottingUtilities.o\ |
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217 | $(UTILDIR)/pgplot_related.o |
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218 | endif |
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219 | |
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220 | duchamp : $(OBJECTS) |
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221 | $(LINK) -o $(EXEC) $(OBJECTS) $(LIBS) |
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222 | |
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223 | lib : $(OBJECTS) |
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224 | $(AR) $(LIB) $(OBJECTS) |
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225 | $(RANLIB) $(LIB) |
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226 | $(SHAREDLIB) $(CINC) $(LIBS) -o $(LIBSO) $(OBJECTS) |
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227 | # $(CXX) $(SHAREDFLAGS) -o $(LIBSO) $(OBJECTS) |
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228 | |
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229 | createTestImage : $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o |
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230 | $(CXX) -o createTestImage.x\ |
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231 | $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o\ |
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232 | $(CFITSIOLIB) @LIBS@ |
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233 | |
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234 | install : |
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235 | $(INSTALL) -d -m 2755 $(INSTALLDIR) |
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236 | $(INSTALL) -m 755 $(EXEC) $(INSTALLDIR) |
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237 | $(RM) $(INSTALLDIR)/$(EXEC-STUB) |
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238 | cd $(INSTALLDIR) && $(LN_S) $(EXEC) $(EXEC-STUB) |
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239 | -test ! -f $(LIB) || $(INSTALL) -d -m 2755 $(LIBDIR) |
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240 | -test ! -f $(LIB) || $(INSTALL) -m 644 $(LIB) $(LIBDIR) |
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241 | -test ! -f $(LIB) || ( cd $(LIBDIR) && $(RM) $(LIB_LN) && $(LN_S) $(LIB) $(LIB_LN) ) |
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242 | -test ! -f $(LIBSO) || ( $(INSTALL) -m 755 $(LIBSO) $(LIBDIR) && \ |
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243 | if [ "@SHRLN@" != "" ] ; then \ |
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244 | cd $(LIBDIR) && $(RM) $(LIBSO_LN) && $(LN_S) $(LIBSO) $(LIBSO_LN); \ |
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245 | fi ) |
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246 | $(INSTALL) -d -m 2755 $(INCDIR) |
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247 | $(INSTALL) -m 644 $(BASE)/*.hh $(INCDIR) |
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248 | $(INSTALL) -m 644 $(BASE)/*.h $(INCDIR) |
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249 | $(INSTALL) -d -m 2755 $(INCDIR)/Cubes |
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250 | $(INSTALL) -m 644 $(CUBESDIR)/*.hh $(INCDIR)/Cubes |
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251 | $(INSTALL) -d -m 2755 $(INCDIR)/ATrous |
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252 | $(INSTALL) -m 644 $(ATROUSDIR)/*.hh $(INCDIR)/ATrous |
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253 | $(INSTALL) -d -m 2755 $(INCDIR)/Detection |
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254 | $(INSTALL) -m 644 $(DETECTIONDIR)/*.hh $(INCDIR)/Detection |
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255 | $(INSTALL) -d -m 2755 $(INCDIR)/FitsIO |
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256 | $(INSTALL) -m 644 $(FITSIODIR)/*.hh $(INCDIR)/FitsIO |
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257 | $(INSTALL) -d -m 2755 $(INCDIR)/Plotting |
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258 | $(INSTALL) -m 644 $(PLOTDIR)/*.hh $(INCDIR)/Plotting |
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259 | $(INSTALL) -d -m 2755 $(INCDIR)/PixelMap |
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260 | $(INSTALL) -m 644 $(PIXELMAPDIR)/*.hh $(INCDIR)/PixelMap |
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261 | $(INSTALL) -d -m 2755 $(INCDIR)/Outputs |
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262 | $(INSTALL) -m 644 $(OUTPUTSDIR)/*.hh $(INCDIR)/Outputs |
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263 | $(INSTALL) -d -m 2755 $(INCDIR)/Utils |
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264 | $(INSTALL) -m 644 $(UTILDIR)/*.hh $(INCDIR)/Utils |
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265 | $(INSTALL) -m 644 $(UTILDIR)/*.tcc $(INCDIR)/Utils |
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266 | |
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267 | $(OBJECTS) : $(HEADS) |
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268 | |
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269 | .cc.o: |
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270 | $(CXX) -c $< $(CINC) -o $@ |
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271 | |
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272 | .c.o: |
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273 | $(CC) -c $< $(CINC) -o $@ |
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274 | |
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275 | clean : |
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276 | rm -f $(BASE)/*.o $(ATROUSDIR)/*.o $(CUBESDIR)/*.o $(FITSIODIR)/*.o $(DETECTIONDIR)/*.o $(UTILDIR)/*.o $(PIXELMAPDIR)/*.o $(PLOTDIR)/*.o $(LIB) $(LIBSO) |
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277 | |
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278 | cleanest: clean |
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279 | rm -rf Makefile config.log config.status src/config.h $(EXEC) |
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