source: trunk/test/test_scantable.py@ 1829

Last change on this file since 1829 was 1824, checked in by Malte Marquarding, 14 years ago

Refactoring of init.py. Moved functionality into separate modules. Some minor fixes to make unit test work under 'standard asap'.
File size: 5.7 KB
Line 
1import unittest
2import datetime
3from asap import scantable, selector, rcParams, mask_not, asaplog
4asaplog.disable()
5
6class ScantableTest(unittest.TestCase):
7 def setUp(self):
8 s = scantable("data/MOPS.rpf", average=True)
9 sel = selector()
10 # make sure this order is always correct - in can be random
11 sel.set_order(["SCANNO", "POLNO"])
12 s.set_selection(sel)
13 self.st = s.copy()
14 restfreqs = [86.243] # 13CO-1/0, SiO the two IF
15 self.st.set_restfreqs(restfreqs,"GHz")
16
17 def test_init(self):
18 st = scantable("data/MOPS.rpf", average=False)
19 self.assertEqual(st.ncycle(), 32)
20 st = scantable("data/MOPS.rpf", average=True)
21 self.assertEqual(st.ncycle(), 2)
22 st = scantable("data/MOPS.rpf", unit="Jy")
23 self.assertEqual(st.get_fluxunit(), "Jy")
24 st = scantable("data/MOPS.rpf", unit="K")
25 self.assertEqual(st.get_fluxunit(), "K")
26 self.assertRaises(RuntimeError, scantable, "data/MOPS.rpf", unit="junk")
27 st = scantable(["data/MOPS.rpf","data/MOPS.rpf"], average=False)
28 self.assertEqual(st.nscan(), 4)
29
30 def test_copy(self):
31 st = self.st.copy()
32 self.assertNotEqual(id(st), id(self.st))
33
34 def test_drop_scan(self):
35 st = self.st.drop_scan([1])
36 self.assertEqual(st.nscan(), 1)
37
38 def test_get_scan(self):
39 st = self.st.get_scan([1])
40 self.assertEqual(st.nscan(), 1)
41 st = self.st.get_scan("Orion_SiO_R")
42 self.assertEqual(st.get_sourcename()[-1], "Orion_SiO_R")
43 self.assertEqual(st.nscan(), 1)
44
45 def test_get_spectrum(self):
46 spec = self.st.get_spectrum(0)
47 self.assertAlmostEqual(max(spec), 215.279830933)
48
49 def test_get_mask(self):
50 spec = self.st.get_mask(0)
51 self.assertEqual(len(spec), 4096)
52
53 def test_set_spectrum(self):
54 spec = [ 1.0 for i in range(self.st.nchan()) ]
55 self.st.set_spectrum(spec, 0)
56 spec1 = self.st.get_spectrum(0)
57 self.assertAlmostEqual(max(spec1), 1.0)
58
59 def test_selection(self):
60 sel = selector()
61 sel.set_polarisations("YY")
62 self.st.set_selection(sel)
63 self.assertEqual(self.st.getpolnos(), (1,))
64 sel1 = self.st.get_selection()
65 self.assertEqual(sel1.get_pols(), [1])
66 self.st.set_selection(pols="XX")
67 self.assertEqual(self.st.getpolnos(), (0,))
68
69 def test_stats(self):
70 stats = { 'min': 113.767166138,
71 'max':215.279830933, 'sumsq':128759200.0,
72 'sum':720262.375, 'mean':175.845306396,
73 'var':513.95324707, 'stddev':22.6705360413,
74 'avdev':16.3966751099, 'rms':177.300170898,
75 'median':182.891845703}
76 for k,v in stats.iteritems():
77 sval = self.st.stats(stat=k)
78 self.assertAlmostEqual(sval[0], v)
79 msk = self.st.create_mask([0,100], [3900,4096])
80 self.assertAlmostEqual(self.st.stats("sum", msk)[0], 35216.87890625)
81
82 def test_get_column_names(self):
83 cnames = ['SCANNO', 'CYCLENO', 'BEAMNO', 'IFNO',
84 'POLNO', 'FREQ_ID', 'MOLECULE_ID', 'REFBEAMNO', 'FLAGROW',
85 'TIME', 'INTERVAL', 'SRCNAME', 'SRCTYPE',
86 'FIELDNAME', 'SPECTRA', 'FLAGTRA', 'TSYS',
87 'DIRECTION', 'AZIMUTH', 'ELEVATION',
88 'OPACITY', 'TCAL_ID', 'FIT_ID',
89 'FOCUS_ID', 'WEATHER_ID', 'SRCVELOCITY',
90 'SRCPROPERMOTION', 'SRCDIRECTION',
91 'SCANRATE']
92 self.assertEqual(self.st.get_column_names(), cnames)
93
94 def test_get_tsys(self):
95 self.assertAlmostEqual(self.st.get_tsys()[0], 175.830429077)
96
97 def test_get_time(self):
98 self.assertEqual(self.st.get_time(0), '2008/03/12/09:32:50')
99 dt = datetime.datetime(2008,3,12,9,32,50)
100 self.assertEqual(self.st.get_time(0, True), dt)
101
102 def test_get_inttime(self):
103 self.assertAlmostEqual(self.st.get_inttime()[0], 30.720016479)
104
105 def test_get_sourcename(self):
106 self.assertEqual(self.st.get_sourcename(0), 'Orion_SiO_R')
107 self.assertEqual(self.st.get_sourcename(),
108 ['Orion_SiO_R', 'Orion_SiO_R',
109 'Orion_SiO', 'Orion_SiO'])
110
111 def test_get_azimuth(self):
112 self.assertAlmostEqual(self.st.get_azimuth()[0], 5.628767013)
113
114 def test_get_elevation(self):
115 self.assertAlmostEqual(self.st.get_elevation()[0], 1.01711678504)
116
117 def test_get_parangle(self):
118 self.assertAlmostEqual(self.st.get_parangle()[0], 2.5921990871)
119
120 def test_get_direction(self):
121 self.assertEqual(self.st.get_direction()[0], '05:35:14.5 -04.52.29.5')
122
123 def test_get_directionval(self):
124 dv = self.st.get_directionval()[0]
125 self.assertAlmostEqual(dv[0], 1.4627692699)
126 self.assertAlmostEqual(dv[1], -0.0850824415)
127
128 def test_unit(self):
129 self.st.set_unit('')
130 self.st.set_unit('GHz')
131 self.st.set_unit('km/s')
132 self.assertRaises(RuntimeError, self.st.set_unit, 'junk')
133 self.assertEquals(self.st.get_unit(), 'km/s')
134
135 def test_average_pol(self):
136 ap = self.st.average_pol()
137 self.assertEqual(ap.npol(), 1)
138
139 def test_drop_scan(self):
140 s0 = self.st.drop_scan(1)
141 self.assertEqual(s0.getscannos(), (0,))
142 s1 = self.st.drop_scan([0])
143 self.assertEqual(s1.getscannos(), (1,))
144
145 def test_flag(self):
146 q = self.st.auto_quotient()
147 q.set_unit('km/s')
148 q0 = q.copy()
149 q1 = q.copy()
150 msk = q0.create_mask([-10,20])
151 q0.flag(mask=mask_not(msk))
152 q1.flag(mask=msk)
153 self.assertAlmostEqual(q0.stats(stat='max')[0], 95.62171936)
154 self.assertAlmostEqual(q1.stats(stat='max')[0], 2.66563416)
155
156if __name__ == '__main__':
157 unittest.main()
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