[2356] | 1 | #include <iostream>
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| 2 | #include <fstream>
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[2396] | 3 | #include <cfloat>
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[2356] | 4 |
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| 5 | #include <casa/BasicSL/String.h>
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| 6 | #include <casa/Arrays/Vector.h>
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| 7 | #include <casa/Arrays/Matrix.h>
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| 8 | #include <casa/Arrays/Cube.h>
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| 9 | #include <casa/Arrays/ArrayMath.h>
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[2375] | 10 | #include <casa/Arrays/ArrayIter.h>
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[2356] | 11 | #include <casa/Quanta/Quantum.h>
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| 12 | #include <casa/Quanta/QuantumHolder.h>
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| 13 | #include <casa/Utilities/CountedPtr.h>
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[2361] | 14 | #include <casa/Logging/LogIO.h>
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[2356] | 15 |
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| 16 | #include <tables/Tables/Table.h>
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[2360] | 17 | #include <tables/Tables/TableRecord.h>
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| 18 | #include <tables/Tables/ExprNode.h>
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[2356] | 19 | #include <tables/Tables/ScalarColumn.h>
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| 20 | #include <tables/Tables/ArrayColumn.h>
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[2379] | 21 | #include <tables/Tables/TableIter.h>
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[2356] | 22 |
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| 23 | #include <measures/Measures/MDirection.h>
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| 24 |
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[2364] | 25 | #include <MathUtils.h>
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| 26 |
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[2356] | 27 | #include "STGrid.h"
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| 28 |
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| 29 | using namespace std ;
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[2393] | 30 | using namespace concurrent ;
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[2356] | 31 | using namespace casa ;
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| 32 | using namespace asap ;
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| 33 |
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| 34 | namespace asap {
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| 35 |
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[2384] | 36 | // for performance check
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| 37 | double eToInt = 0.0 ;
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| 38 | double eGetWeight = 0.0 ;
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| 39 |
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[2356] | 40 | // constructor
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| 41 | STGrid::STGrid()
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[2393] | 42 | : vshape_( 1 ), wshape_( 2 ), dshape_( 2 )
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[2356] | 43 | {
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| 44 | init() ;
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| 45 | }
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| 46 |
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| 47 | STGrid::STGrid( const string infile )
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[2393] | 48 | : vshape_( 1 ), wshape_( 2 ), dshape_( 2 )
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[2356] | 49 | {
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| 50 | init() ;
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| 51 |
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| 52 | setFileIn( infile ) ;
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| 53 | }
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| 54 |
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[2390] | 55 | STGrid::STGrid( const vector<string> infile )
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| 56 | {
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| 57 | init() ;
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| 58 |
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| 59 | setFileList( infile ) ;
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| 60 | }
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| 61 |
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[2356] | 62 | void STGrid::init()
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| 63 | {
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[2362] | 64 | ifno_ = -1 ;
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[2356] | 65 | nx_ = -1 ;
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| 66 | ny_ = -1 ;
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[2361] | 67 | npol_ = 0 ;
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| 68 | nchan_ = 0 ;
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| 69 | nrow_ = 0 ;
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[2356] | 70 | cellx_ = 0.0 ;
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| 71 | celly_ = 0.0 ;
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| 72 | center_ = Vector<Double> ( 2, 0.0 ) ;
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| 73 | convType_ = "BOX" ;
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[2361] | 74 | wtype_ = "UNIFORM" ;
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[2356] | 75 | convSupport_ = -1 ;
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| 76 | userSupport_ = -1 ;
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| 77 | convSampling_ = 100 ;
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[2379] | 78 | nprocessed_ = 0 ;
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| 79 | nchunk_ = 0 ;
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[2388] | 80 |
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| 81 | // initialize user input
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| 82 | nxUI_ = -1 ;
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| 83 | nyUI_ = -1 ;
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| 84 | cellxUI_ = "" ;
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| 85 | cellyUI_ = "" ;
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| 86 | centerUI_ = "" ;
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[2396] | 87 | doclip_ = False ;
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[2356] | 88 | }
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| 89 |
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| 90 | void STGrid::setFileIn( const string infile )
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| 91 | {
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[2393] | 92 | nfile_ = 1 ;
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[2356] | 93 | String name( infile ) ;
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[2393] | 94 | infileList_.resize( nfile_ ) ;
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| 95 | infileList_[0] = String(infile) ;
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[2356] | 96 | }
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| 97 |
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[2390] | 98 | void STGrid::setFileList( const vector<string> infile )
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| 99 | {
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| 100 | nfile_ = infile.size() ;
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| 101 | infileList_.resize( nfile_ ) ;
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| 102 | for ( uInt i = 0 ; i < nfile_ ; i++ ) {
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| 103 | infileList_[i] = infile[i] ;
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| 104 | }
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| 105 | }
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| 106 |
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[2360] | 107 | void STGrid::setPolList( vector<unsigned int> pols )
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| 108 | {
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| 109 | pollist_.assign( Vector<uInt>( pols ) ) ;
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| 110 | }
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| 111 |
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[2364] | 112 | void STGrid::setScanList( vector<unsigned int> scans )
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| 113 | {
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| 114 | scanlist_.assign( Vector<uInt>( scans ) ) ;
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| 115 | }
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| 116 |
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[2361] | 117 | void STGrid::setWeight( const string wType )
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| 118 | {
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| 119 | wtype_ = String( wType ) ;
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| 120 | wtype_.upcase() ;
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| 121 | }
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| 122 |
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[2356] | 123 | void STGrid::defineImage( int nx,
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| 124 | int ny,
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| 125 | string scellx,
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| 126 | string scelly,
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| 127 | string scenter )
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| 128 | {
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[2388] | 129 | nxUI_ = (Int)nx ;
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| 130 | nyUI_ = (Int)ny ;
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| 131 | cellxUI_ = String( scellx ) ;
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| 132 | cellyUI_ = String( scelly ) ;
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| 133 | centerUI_ = String( scenter ) ;
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[2356] | 134 | }
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| 135 |
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[2364] | 136 | void STGrid::setFunc( string convType,
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| 137 | int convSupport )
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[2356] | 138 | {
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| 139 | convType_ = String( convType ) ;
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| 140 | convType_.upcase() ;
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| 141 | userSupport_ = (Int)convSupport ;
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| 142 | }
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| 143 |
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| 144 | #define NEED_UNDERSCORES
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| 145 | #if defined(NEED_UNDERSCORES)
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| 146 | #define ggridsd ggridsd_
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| 147 | #endif
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| 148 | extern "C" {
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| 149 | void ggridsd(Double*,
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| 150 | const Complex*,
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| 151 | Int*,
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| 152 | Int*,
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| 153 | Int*,
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| 154 | const Int*,
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| 155 | const Int*,
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| 156 | const Float*,
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| 157 | Int*,
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| 158 | Int*,
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| 159 | Complex*,
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| 160 | Float*,
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| 161 | Int*,
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| 162 | Int*,
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| 163 | Int *,
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| 164 | Int *,
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| 165 | Int*,
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| 166 | Int*,
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| 167 | Float*,
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| 168 | Int*,
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| 169 | Int*,
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| 170 | Double*);
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| 171 | }
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[2384] | 172 | void STGrid::call_ggridsd( Array<Double> &xypos,
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| 173 | Array<Complex> &spectra,
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| 174 | Int &nvispol,
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| 175 | Int &nvischan,
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| 176 | Array<Int> &flagtra,
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| 177 | Array<Int> &flagrow,
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| 178 | Array<Float> &weight,
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| 179 | Int &nrow,
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| 180 | Int &irow,
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| 181 | Array<Complex> &gdata,
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| 182 | Array<Float> &gwgt,
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| 183 | Int &nx,
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| 184 | Int &ny,
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| 185 | Int &npol,
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| 186 | Int &nchan,
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| 187 | Int &support,
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| 188 | Int &sampling,
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| 189 | Vector<Float> &convFunc,
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[2381] | 190 | Int *chanMap,
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| 191 | Int *polMap )
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| 192 | {
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| 193 | // parameters for gridding
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| 194 | Int idopsf = 0 ;
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[2384] | 195 | Int len = npol*nchan ;
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[2381] | 196 | Double *sumw_p = new Double[len] ;
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| 197 | {
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| 198 | Double *work_p = sumw_p ;
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| 199 | for ( Int i = 0 ; i < len ; i++ ) {
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| 200 | *work_p = 0.0 ;
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| 201 | work_p++ ;
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| 202 | }
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| 203 | }
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| 204 |
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[2384] | 205 | // prepare pointer
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| 206 | Bool deletePos, deleteData, deleteWgt, deleteFlag, deleteFlagR, deleteConv, deleteDataG, deleteWgtG ;
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| 207 | Double *xy_p = xypos.getStorage( deletePos ) ;
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| 208 | const Complex *values_p = spectra.getStorage( deleteData ) ;
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| 209 | const Int *flag_p = flagtra.getStorage( deleteFlag ) ;
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| 210 | const Int *rflag_p = flagrow.getStorage( deleteFlagR ) ;
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| 211 | const Float *wgt_p = weight.getStorage( deleteWgt ) ;
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| 212 | Complex *grid_p = gdata.getStorage( deleteDataG ) ;
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| 213 | Float *wgrid_p = gwgt.getStorage( deleteWgtG ) ;
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| 214 | Float *conv_p = convFunc.getStorage( deleteConv ) ;
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[2385] | 215 |
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| 216 | // pass copy of irow to ggridsd since it will be modified in theroutine
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| 217 | Int irowCopy = irow ;
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[2384] | 218 |
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[2381] | 219 | // call ggridsd
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[2384] | 220 | ggridsd( xy_p,
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| 221 | values_p,
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| 222 | &nvispol,
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| 223 | &nvischan,
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[2381] | 224 | &idopsf,
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[2384] | 225 | flag_p,
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| 226 | rflag_p,
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| 227 | wgt_p,
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| 228 | &nrow,
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[2385] | 229 | &irowCopy,
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[2384] | 230 | grid_p,
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| 231 | wgrid_p,
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| 232 | &nx,
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| 233 | &ny,
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| 234 | &npol,
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| 235 | &nchan,
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| 236 | &support,
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| 237 | &sampling,
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| 238 | conv_p,
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[2381] | 239 | chanMap,
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| 240 | polMap,
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| 241 | sumw_p ) ;
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| 242 |
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| 243 | // finalization
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[2384] | 244 | xypos.putStorage( xy_p, deletePos ) ;
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| 245 | spectra.freeStorage( values_p, deleteData ) ;
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| 246 | flagtra.freeStorage( flag_p, deleteFlag ) ;
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| 247 | flagrow.freeStorage( rflag_p, deleteFlagR ) ;
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| 248 | weight.freeStorage( wgt_p, deleteWgt ) ;
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| 249 | gdata.putStorage( grid_p, deleteDataG ) ;
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| 250 | gwgt.putStorage( wgrid_p, deleteWgtG ) ;
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| 251 | convFunc.putStorage( conv_p, deleteConv ) ;
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[2381] | 252 | delete sumw_p ;
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| 253 | }
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| 254 |
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[2396] | 255 | #define NEED_UNDERSCORES
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| 256 | #if defined(NEED_UNDERSCORES)
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| 257 | #define ggridsd2 ggridsd2_
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| 258 | #endif
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| 259 | extern "C" {
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| 260 | void ggridsd2(Double*,
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| 261 | const Complex*,
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| 262 | Int*,
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| 263 | Int*,
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| 264 | Int*,
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| 265 | const Int*,
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| 266 | const Int*,
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| 267 | const Float*,
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| 268 | Int*,
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| 269 | Int*,
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| 270 | Complex*,
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| 271 | Float*,
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| 272 | Int*,
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| 273 | Complex*,
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| 274 | Float*,
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| 275 | Float*,
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| 276 | Complex*,
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| 277 | Float*,
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| 278 | Float*,
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| 279 | Int*,
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| 280 | Int*,
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| 281 | Int *,
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| 282 | Int *,
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| 283 | Int*,
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| 284 | Int*,
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| 285 | Float*,
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| 286 | Int*,
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| 287 | Int*,
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| 288 | Double*);
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| 289 | }
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| 290 | void STGrid::call_ggridsd2( Array<Double> &xypos,
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| 291 | Array<Complex> &spectra,
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| 292 | Int &nvispol,
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| 293 | Int &nvischan,
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| 294 | Array<Int> &flagtra,
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| 295 | Array<Int> &flagrow,
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| 296 | Array<Float> &weight,
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| 297 | Int &nrow,
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| 298 | Int &irow,
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| 299 | Array<Complex> &gdata,
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| 300 | Array<Float> &gwgt,
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| 301 | Array<Int> &npoints,
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| 302 | Array<Complex> &clipmin,
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| 303 | Array<Float> &clipwmin,
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| 304 | Array<Float> &clipcmin,
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| 305 | Array<Complex> &clipmax,
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| 306 | Array<Float> &clipwmax,
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| 307 | Array<Float> &clipcmax,
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| 308 | Int &nx,
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| 309 | Int &ny,
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| 310 | Int &npol,
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| 311 | Int &nchan,
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| 312 | Int &support,
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| 313 | Int &sampling,
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| 314 | Vector<Float> &convFunc,
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| 315 | Int *chanMap,
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| 316 | Int *polMap )
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| 317 | {
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| 318 | // parameters for gridding
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| 319 | Int idopsf = 0 ;
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| 320 | Int len = npol*nchan ;
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| 321 | Double *sumw_p = new Double[len] ;
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| 322 | {
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| 323 | Double *work_p = sumw_p ;
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| 324 | for ( Int i = 0 ; i < len ; i++ ) {
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| 325 | *work_p = 0.0 ;
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| 326 | work_p++ ;
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| 327 | }
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| 328 | }
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[2383] | 329 |
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[2396] | 330 | // prepare pointer
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| 331 | Bool deletePos, deleteData, deleteWgt, deleteFlag, deleteFlagR, deleteConv, deleteDataG, deleteWgtG, deleteNpts, deleteCMin, deleteCWMin, deleteCCMin, deleteCMax, deleteCWMax, deleteCCMax ;
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| 332 | Double *xy_p = xypos.getStorage( deletePos ) ;
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| 333 | const Complex *values_p = spectra.getStorage( deleteData ) ;
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| 334 | const Int *flag_p = flagtra.getStorage( deleteFlag ) ;
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| 335 | const Int *rflag_p = flagrow.getStorage( deleteFlagR ) ;
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| 336 | const Float *wgt_p = weight.getStorage( deleteWgt ) ;
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| 337 | Complex *grid_p = gdata.getStorage( deleteDataG ) ;
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| 338 | Float *wgrid_p = gwgt.getStorage( deleteWgtG ) ;
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| 339 | Float *conv_p = convFunc.getStorage( deleteConv ) ;
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| 340 | Int *npts_p = npoints.getStorage( deleteNpts ) ;
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| 341 | Complex *cmin_p = clipmin.getStorage( deleteCMin ) ;
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| 342 | Float *cwmin_p = clipwmin.getStorage( deleteCWMin ) ;
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| 343 | Float *ccmin_p = clipcmin.getStorage( deleteCCMin ) ;
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| 344 | Complex *cmax_p = clipmax.getStorage( deleteCMax ) ;
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| 345 | Float *cwmax_p = clipwmax.getStorage( deleteCWMax ) ;
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| 346 | Float *ccmax_p = clipcmax.getStorage( deleteCCMax ) ;
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| 347 |
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| 348 | // pass copy of irow to ggridsd since it will be modified in theroutine
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| 349 | Int irowCopy = irow ;
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| 350 |
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| 351 | // call ggridsd
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| 352 | ggridsd2( xy_p,
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| 353 | values_p,
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| 354 | &nvispol,
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| 355 | &nvischan,
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| 356 | &idopsf,
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| 357 | flag_p,
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| 358 | rflag_p,
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| 359 | wgt_p,
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| 360 | &nrow,
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| 361 | &irowCopy,
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| 362 | grid_p,
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| 363 | wgrid_p,
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| 364 | npts_p,
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| 365 | cmin_p,
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| 366 | cwmin_p,
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| 367 | ccmin_p,
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| 368 | cmax_p,
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| 369 | cwmax_p,
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| 370 | ccmax_p,
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| 371 | &nx,
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| 372 | &ny,
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| 373 | &npol,
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| 374 | &nchan,
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| 375 | &support,
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| 376 | &sampling,
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| 377 | conv_p,
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| 378 | chanMap,
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| 379 | polMap,
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| 380 | sumw_p ) ;
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| 381 |
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| 382 | // finalization
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| 383 | xypos.putStorage( xy_p, deletePos ) ;
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| 384 | spectra.freeStorage( values_p, deleteData ) ;
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| 385 | flagtra.freeStorage( flag_p, deleteFlag ) ;
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| 386 | flagrow.freeStorage( rflag_p, deleteFlagR ) ;
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| 387 | weight.freeStorage( wgt_p, deleteWgt ) ;
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| 388 | gdata.putStorage( grid_p, deleteDataG ) ;
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| 389 | gwgt.putStorage( wgrid_p, deleteWgtG ) ;
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| 390 | convFunc.putStorage( conv_p, deleteConv ) ;
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| 391 | clipmin.putStorage( cmin_p, deleteCMin ) ;
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| 392 | clipwmin.putStorage( cwmin_p, deleteCWMin ) ;
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| 393 | clipcmin.putStorage( ccmin_p, deleteCCMin ) ;
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| 394 | clipmax.putStorage( cmax_p, deleteCMax ) ;
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| 395 | clipwmax.putStorage( cwmax_p, deleteCWMax ) ;
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| 396 | clipcmax.putStorage( ccmax_p, deleteCCMax ) ;
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| 397 | delete sumw_p ;
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| 398 | }
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| 399 |
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[2383] | 400 | void STGrid::grid()
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| 401 | {
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[2384] | 402 | LogIO os( LogOrigin("STGrid", "grid", WHERE) ) ;
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[2385] | 403 | double t0,t1 ;
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[2384] | 404 |
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[2383] | 405 | // data selection
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[2385] | 406 | t0 = mathutil::gettimeofday_sec() ;
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[2383] | 407 | selectData() ;
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[2385] | 408 | t1 = mathutil::gettimeofday_sec() ;
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| 409 | os << "selectData: elapsed time is " << t1-t0 << " sec." << LogIO::POST ;
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| 410 |
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[2388] | 411 | setupGrid() ;
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[2383] | 412 | setupArray() ;
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| 413 |
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| 414 | if ( wtype_.compare("UNIFORM") != 0 &&
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| 415 | wtype_.compare("TINT") != 0 &&
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| 416 | wtype_.compare("TSYS") != 0 &&
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| 417 | wtype_.compare("TINTSYS") != 0 ) {
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| 418 | LogIO os( LogOrigin("STGrid", "grid", WHERE) ) ;
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| 419 | os << LogIO::WARN << "Unsupported weight type '" << wtype_ << "', apply UNIFORM weight" << LogIO::POST ;
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| 420 | wtype_ = "UNIFORM" ;
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| 421 | }
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| 422 |
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[2384] | 423 | // grid parameter
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| 424 | os << LogIO::DEBUGGING ;
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| 425 | os << "----------" << endl ;
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| 426 | os << "Data selection summary" << endl ;
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| 427 | os << " ifno = " << ifno_ << endl ;
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| 428 | os << " pollist = " << pollist_ << endl ;
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| 429 | os << " scanlist = " << scanlist_ << endl ;
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| 430 | os << "----------" << endl ;
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| 431 | os << "Grid parameter summary" << endl ;
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| 432 | os << " (nx,ny) = (" << nx_ << "," << ny_ << ")" << endl ;
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---|
| 433 | os << " (cellx,celly) = (" << cellx_ << "," << celly_ << ")" << endl ;
|
---|
| 434 | os << " center = " << center_ << endl ;
|
---|
| 435 | os << " weighting = " << wtype_ << endl ;
|
---|
[2386] | 436 | os << " convfunc = " << convType_ << " with support " << convSupport_ << endl ;
|
---|
[2396] | 437 | os << " doclip = " << (doclip_?"True":"False") << endl ;
|
---|
[2384] | 438 | os << "----------" << LogIO::POST ;
|
---|
| 439 | os << LogIO::NORMAL ;
|
---|
| 440 |
|
---|
[2398] | 441 | if ( doclip_ )
|
---|
[2396] | 442 | gridPerRowWithClipping() ;
|
---|
[2383] | 443 | else
|
---|
| 444 | gridPerRow() ;
|
---|
| 445 | }
|
---|
| 446 |
|
---|
[2398] | 447 | void STGrid::updateChunkShape()
|
---|
[2383] | 448 | {
|
---|
| 449 | // TODO: nchunk_ must be determined from nchan_, npol_, and (nx_,ny_)
|
---|
| 450 | // by considering data size to be allocated for ggridsd input/output
|
---|
[2385] | 451 | nchunk_ = 400 ;
|
---|
[2383] | 452 | nchunk_ = min( nchunk_, nrow_ ) ;
|
---|
[2393] | 453 | vshape_ = IPosition( 1, nchunk_ ) ;
|
---|
| 454 | wshape_ = IPosition( 2, nchan_, nchunk_ ) ;
|
---|
| 455 | dshape_ = IPosition( 2, 2, nchunk_ ) ;
|
---|
[2383] | 456 | }
|
---|
| 457 |
|
---|
[2393] | 458 | struct STGChunk {
|
---|
| 459 | Int nrow ;
|
---|
| 460 | Array<Complex> spectra;
|
---|
| 461 | Array<Int> flagtra;
|
---|
| 462 | Array<Int> rflag;
|
---|
| 463 | Array<Float> weight;
|
---|
| 464 | Array<Double> direction;
|
---|
| 465 | STGChunk(IPosition const &wshape, IPosition const &vshape,
|
---|
| 466 | IPosition const &dshape)
|
---|
| 467 | : spectra(wshape), flagtra(wshape), rflag(vshape), weight(wshape),
|
---|
| 468 | direction(dshape)
|
---|
| 469 | { }
|
---|
| 470 | };
|
---|
| 471 |
|
---|
| 472 | struct STCommonData {
|
---|
| 473 | Int gnx;
|
---|
| 474 | Int gny;
|
---|
| 475 | Int *chanMap;
|
---|
| 476 | Vector<Float> convFunc ;
|
---|
| 477 | Array<Complex> gdataArrC;
|
---|
| 478 | Array<Float> gwgtArr;
|
---|
| 479 | STCommonData(IPosition const &gshape, Array<Float> const &data)
|
---|
| 480 | : gdataArrC(gshape, 0.0), gwgtArr(data) {}
|
---|
| 481 | };
|
---|
| 482 |
|
---|
[2396] | 483 | struct STCommonDataWithClipping {
|
---|
| 484 | Int gnx;
|
---|
| 485 | Int gny;
|
---|
| 486 | Int *chanMap;
|
---|
| 487 | Vector<Float> convFunc ;
|
---|
| 488 | Array<Complex> gdataArrC;
|
---|
| 489 | Array<Float> gwgtArr;
|
---|
| 490 | Array<Int> npoints ;
|
---|
| 491 | Array<Complex> clipMin ;
|
---|
| 492 | Array<Float> clipWMin ;
|
---|
| 493 | Array<Float> clipCMin ;
|
---|
| 494 | Array<Complex> clipMax ;
|
---|
| 495 | Array<Float> clipWMax ;
|
---|
| 496 | Array<Float> clipCMax ;
|
---|
| 497 | STCommonDataWithClipping(IPosition const &gshape,
|
---|
| 498 | IPosition const &pshape,
|
---|
| 499 | Array<Float> const &data)
|
---|
| 500 | : gdataArrC(gshape, 0.0),
|
---|
| 501 | gwgtArr(data),
|
---|
| 502 | npoints(pshape, 0),
|
---|
| 503 | clipMin(gshape, Complex(FLT_MAX,0.0)),
|
---|
| 504 | clipWMin(gshape, 0.0),
|
---|
| 505 | clipCMin(gshape, 0.0),
|
---|
| 506 | clipMax(gshape, Complex(-FLT_MAX,0.0)),
|
---|
| 507 | clipWMax(gshape, 0.0),
|
---|
| 508 | clipCMax(gshape, 0.0)
|
---|
| 509 | {}
|
---|
| 510 | };
|
---|
| 511 |
|
---|
[2393] | 512 | #define DO_AHEAD 3
|
---|
| 513 |
|
---|
| 514 | struct STContext {
|
---|
| 515 | STCommonData &common;
|
---|
| 516 | FIFO<STGChunk *, DO_AHEAD> queue;
|
---|
| 517 | STGrid *const self;
|
---|
| 518 | const Int pol;
|
---|
| 519 | STContext(STGrid *obj, STCommonData &common, Int pol)
|
---|
| 520 | : self(obj), common(common), pol(pol) {}
|
---|
| 521 | };
|
---|
| 522 |
|
---|
[2396] | 523 | struct STContextWithClipping {
|
---|
| 524 | STCommonDataWithClipping &common;
|
---|
| 525 | FIFO<STGChunk *, DO_AHEAD> queue;
|
---|
| 526 | STGrid *const self;
|
---|
| 527 | const Int pol;
|
---|
| 528 | STContextWithClipping(STGrid *obj, STCommonDataWithClipping &common, Int pol)
|
---|
| 529 | : self(obj), common(common), pol(pol) {}
|
---|
| 530 | };
|
---|
[2393] | 531 |
|
---|
[2396] | 532 |
|
---|
[2393] | 533 | bool STGrid::produceChunk(void *ctx) throw(PCException)
|
---|
| 534 | {
|
---|
| 535 | STContext &context = *(STContext *)ctx;
|
---|
| 536 | if ( context.self->nprocessed_ >= context.self->nrow_ ) {
|
---|
| 537 | return false;
|
---|
| 538 | }
|
---|
| 539 | STGChunk *chunk = new STGChunk(context.self->wshape_,
|
---|
| 540 | context.self->vshape_,
|
---|
| 541 | context.self->dshape_);
|
---|
| 542 |
|
---|
| 543 | double t0 = mathutil::gettimeofday_sec() ;
|
---|
| 544 | chunk->nrow = context.self->getDataChunk(
|
---|
| 545 | context.self->wshape_, context.self->vshape_, context.self->dshape_,
|
---|
| 546 | chunk->spectra, chunk->direction,
|
---|
| 547 | chunk->flagtra, chunk->rflag, chunk->weight);
|
---|
| 548 | double t1 = mathutil::gettimeofday_sec() ;
|
---|
| 549 | context.self->eGetData_ += t1-t0 ;
|
---|
| 550 |
|
---|
| 551 | context.queue.lock();
|
---|
| 552 | context.queue.put(chunk);
|
---|
| 553 | context.queue.unlock();
|
---|
| 554 | return true;
|
---|
| 555 | }
|
---|
| 556 |
|
---|
| 557 | void STGrid::consumeChunk(void *ctx) throw(PCException)
|
---|
| 558 | {
|
---|
| 559 | STContext &context = *(STContext *)ctx;
|
---|
| 560 | STGChunk *chunk = NULL;
|
---|
| 561 | try {
|
---|
| 562 | context.queue.lock();
|
---|
| 563 | chunk = context.queue.get();
|
---|
| 564 | context.queue.unlock();
|
---|
| 565 | } catch (FullException &e) {
|
---|
| 566 | context.queue.unlock();
|
---|
| 567 | // TODO: log error
|
---|
| 568 | throw PCException();
|
---|
| 569 | }
|
---|
| 570 |
|
---|
| 571 | double t0, t1 ;
|
---|
| 572 | // world -> pixel
|
---|
| 573 | Array<Double> xypos( context.self->dshape_ ) ;
|
---|
| 574 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 575 | context.self->toPixel( chunk->direction, xypos ) ;
|
---|
| 576 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 577 | context.self->eToPixel_ += t1-t0 ;
|
---|
| 578 |
|
---|
| 579 | // call ggridsd
|
---|
| 580 | Int nvispol = 1 ;
|
---|
| 581 | Int irow = -1 ;
|
---|
| 582 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 583 | context.self->call_ggridsd( xypos,
|
---|
| 584 | chunk->spectra,
|
---|
| 585 | nvispol,
|
---|
| 586 | context.self->nchan_,
|
---|
| 587 | chunk->flagtra,
|
---|
| 588 | chunk->rflag,
|
---|
| 589 | chunk->weight,
|
---|
| 590 | chunk->nrow,
|
---|
| 591 | irow,
|
---|
| 592 | context.common.gdataArrC,
|
---|
| 593 | context.common.gwgtArr,
|
---|
| 594 | context.common.gnx,
|
---|
| 595 | context.common.gny,
|
---|
| 596 | context.self->npol_,
|
---|
| 597 | context.self->nchan_,
|
---|
| 598 | context.self->convSupport_,
|
---|
| 599 | context.self->convSampling_,
|
---|
| 600 | context.common.convFunc,
|
---|
| 601 | context.common.chanMap,
|
---|
| 602 | (Int*)&context.pol ) ;
|
---|
| 603 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 604 | context.self->eGGridSD_ += t1-t0 ;
|
---|
| 605 |
|
---|
| 606 | delete chunk;
|
---|
| 607 | }
|
---|
| 608 |
|
---|
[2378] | 609 | void STGrid::gridPerRow()
|
---|
| 610 | {
|
---|
| 611 | LogIO os( LogOrigin("STGrid", "gridPerRow", WHERE) ) ;
|
---|
| 612 | double t0, t1 ;
|
---|
| 613 |
|
---|
| 614 |
|
---|
[2379] | 615 | // grid data
|
---|
| 616 | // Extend grid plane with convSupport_
|
---|
[2393] | 617 | // Int gnx = nx_+convSupport_*2 ;
|
---|
| 618 | // Int gny = ny_+convSupport_*2 ;
|
---|
| 619 | Int gnx = nx_;
|
---|
| 620 | Int gny = ny_;
|
---|
| 621 |
|
---|
[2378] | 622 | IPosition gshape( 4, gnx, gny, npol_, nchan_ ) ;
|
---|
| 623 | // 2011/12/20 TN
|
---|
| 624 | // data_ and gwgtArr share storage
|
---|
| 625 | data_.resize( gshape ) ;
|
---|
| 626 | data_ = 0.0 ;
|
---|
[2393] | 627 | STCommonData common = STCommonData(gshape, data_);
|
---|
| 628 | common.gnx = gnx ;
|
---|
| 629 | common.gny = gny ;
|
---|
[2378] | 630 |
|
---|
[2379] | 631 | // parameters for gridding
|
---|
| 632 | Int *chanMap = new Int[nchan_] ;
|
---|
[2393] | 633 | for ( Int i = 0 ; i < nchan_ ; i++ ) {
|
---|
| 634 | chanMap[i] = i ;
|
---|
[2379] | 635 | }
|
---|
[2393] | 636 | common.chanMap = chanMap;
|
---|
[2379] | 637 |
|
---|
[2393] | 638 | // convolution kernel
|
---|
| 639 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 640 | setConvFunc( common.convFunc ) ;
|
---|
| 641 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 642 | os << "setConvFunc: elapsed time is " << t1-t0 << " sec." << LogIO::POST ;
|
---|
| 643 |
|
---|
[2379] | 644 | // for performance check
|
---|
[2393] | 645 | eGetData_ = 0.0 ;
|
---|
| 646 | eToPixel_ = 0.0 ;
|
---|
| 647 | eGGridSD_ = 0.0 ;
|
---|
[2384] | 648 | double eInitPol = 0.0 ;
|
---|
[2379] | 649 |
|
---|
[2390] | 650 | for ( uInt ifile = 0 ; ifile < nfile_ ; ifile++ ) {
|
---|
| 651 | initTable( ifile ) ;
|
---|
[2380] | 652 |
|
---|
[2393] | 653 | os << "start table " << ifile << ": " << infileList_[ifile] << LogIO::POST ;
|
---|
[2398] | 654 | Broker broker = Broker(produceChunk, consumeChunk);
|
---|
[2390] | 655 | for ( Int ipol = 0 ; ipol < npol_ ; ipol++ ) {
|
---|
[2383] | 656 | t0 = mathutil::gettimeofday_sec() ;
|
---|
[2393] | 657 | initPol( ipol ) ; // set ptab_ and attach()
|
---|
[2383] | 658 | t1 = mathutil::gettimeofday_sec() ;
|
---|
[2390] | 659 | eInitPol += t1-t0 ;
|
---|
[2383] | 660 |
|
---|
[2393] | 661 | STContext context(this, common, ipol);
|
---|
[2390] | 662 |
|
---|
| 663 | os << "start pol " << ipol << LogIO::POST ;
|
---|
| 664 |
|
---|
[2393] | 665 | nprocessed_ = 0 ;
|
---|
| 666 | #if 1
|
---|
| 667 | broker.runProducerAsMasterThread(&context, DO_AHEAD);
|
---|
| 668 | #else
|
---|
| 669 | for (;;) {
|
---|
| 670 | bool produced = produceChunk(&context);
|
---|
| 671 | if (! produced) {
|
---|
| 672 | break;
|
---|
| 673 | }
|
---|
| 674 | consumeChunk(&context);
|
---|
[2390] | 675 | }
|
---|
[2393] | 676 | #endif
|
---|
| 677 |
|
---|
[2390] | 678 | os << "end pol " << ipol << LogIO::POST ;
|
---|
[2393] | 679 |
|
---|
[2383] | 680 | }
|
---|
[2393] | 681 | os << "end table " << ifile << LogIO::POST ;
|
---|
[2378] | 682 | }
|
---|
[2384] | 683 | os << "initPol: elapsed time is " << eInitPol << " sec." << LogIO::POST ;
|
---|
[2393] | 684 | os << "getData: elapsed time is " << eGetData_-eToInt-eGetWeight << " sec." << LogIO::POST ;
|
---|
| 685 | os << "toPixel: elapsed time is " << eToPixel_ << " sec." << LogIO::POST ;
|
---|
| 686 | os << "ggridsd: elapsed time is " << eGGridSD_ << " sec." << LogIO::POST ;
|
---|
[2381] | 687 | os << "toInt: elapsed time is " << eToInt << " sec." << LogIO::POST ;
|
---|
[2384] | 688 | os << "getWeight: elapsed time is " << eGetWeight << " sec." << LogIO::POST ;
|
---|
[2383] | 689 |
|
---|
[2379] | 690 | delete chanMap ;
|
---|
| 691 |
|
---|
[2378] | 692 | // set data
|
---|
[2393] | 693 | setData( common.gdataArrC, common.gwgtArr ) ;
|
---|
[2379] | 694 |
|
---|
[2378] | 695 | }
|
---|
| 696 |
|
---|
[2396] | 697 | void STGrid::consumeChunkWithClipping(void *ctx) throw(PCException)
|
---|
| 698 | {
|
---|
| 699 | STContextWithClipping &context = *(STContextWithClipping *)ctx;
|
---|
| 700 | STGChunk *chunk = NULL;
|
---|
| 701 | try {
|
---|
| 702 | context.queue.lock();
|
---|
| 703 | chunk = context.queue.get();
|
---|
| 704 | context.queue.unlock();
|
---|
| 705 | } catch (FullException &e) {
|
---|
| 706 | context.queue.unlock();
|
---|
| 707 | // TODO: log error
|
---|
| 708 | throw PCException();
|
---|
| 709 | }
|
---|
| 710 |
|
---|
| 711 | double t0, t1 ;
|
---|
| 712 | // world -> pixel
|
---|
| 713 | Array<Double> xypos( context.self->dshape_ ) ;
|
---|
| 714 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 715 | context.self->toPixel( chunk->direction, xypos ) ;
|
---|
| 716 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 717 | context.self->eToPixel_ += t1-t0 ;
|
---|
| 718 |
|
---|
| 719 | // call ggridsd
|
---|
| 720 | Int nvispol = 1 ;
|
---|
| 721 | Int irow = -1 ;
|
---|
| 722 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 723 | context.self->call_ggridsd2( xypos,
|
---|
| 724 | chunk->spectra,
|
---|
| 725 | nvispol,
|
---|
| 726 | context.self->nchan_,
|
---|
| 727 | chunk->flagtra,
|
---|
| 728 | chunk->rflag,
|
---|
| 729 | chunk->weight,
|
---|
| 730 | chunk->nrow,
|
---|
| 731 | irow,
|
---|
| 732 | context.common.gdataArrC,
|
---|
| 733 | context.common.gwgtArr,
|
---|
| 734 | context.common.npoints,
|
---|
| 735 | context.common.clipMin,
|
---|
| 736 | context.common.clipWMin,
|
---|
| 737 | context.common.clipCMin,
|
---|
| 738 | context.common.clipMax,
|
---|
| 739 | context.common.clipWMax,
|
---|
| 740 | context.common.clipCMax,
|
---|
| 741 | context.common.gnx,
|
---|
| 742 | context.common.gny,
|
---|
| 743 | context.self->npol_,
|
---|
| 744 | context.self->nchan_,
|
---|
| 745 | context.self->convSupport_,
|
---|
| 746 | context.self->convSampling_,
|
---|
| 747 | context.common.convFunc,
|
---|
| 748 | context.common.chanMap,
|
---|
| 749 | (Int*)&context.pol ) ;
|
---|
| 750 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 751 | context.self->eGGridSD_ += t1-t0 ;
|
---|
| 752 |
|
---|
| 753 | delete chunk;
|
---|
| 754 | }
|
---|
| 755 |
|
---|
| 756 | void STGrid::gridPerRowWithClipping()
|
---|
| 757 | {
|
---|
| 758 | LogIO os( LogOrigin("STGrid", "gridPerRowWithClipping", WHERE) ) ;
|
---|
| 759 | double t0, t1 ;
|
---|
| 760 |
|
---|
| 761 |
|
---|
| 762 | // grid data
|
---|
| 763 | // Extend grid plane with convSupport_
|
---|
| 764 | // Int gnx = nx_+convSupport_*2 ;
|
---|
| 765 | // Int gny = ny_+convSupport_*2 ;
|
---|
| 766 | Int gnx = nx_;
|
---|
| 767 | Int gny = ny_;
|
---|
| 768 |
|
---|
| 769 | IPosition gshape( 4, gnx, gny, npol_, nchan_ ) ;
|
---|
| 770 | IPosition pshape( 3, gnx, gny, npol_ ) ;
|
---|
| 771 | // 2011/12/20 TN
|
---|
| 772 | // data_ and gwgtArr share storage
|
---|
| 773 | data_.resize( gshape ) ;
|
---|
| 774 | data_ = 0.0 ;
|
---|
| 775 | STCommonDataWithClipping common = STCommonDataWithClipping( gshape,
|
---|
| 776 | pshape,
|
---|
| 777 | data_ ) ;
|
---|
| 778 | common.gnx = gnx ;
|
---|
| 779 | common.gny = gny ;
|
---|
| 780 |
|
---|
| 781 | // parameters for gridding
|
---|
| 782 | Int *chanMap = new Int[nchan_] ;
|
---|
| 783 | for ( Int i = 0 ; i < nchan_ ; i++ ) {
|
---|
| 784 | chanMap[i] = i ;
|
---|
| 785 | }
|
---|
| 786 | common.chanMap = chanMap;
|
---|
| 787 |
|
---|
| 788 | // convolution kernel
|
---|
| 789 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 790 | setConvFunc( common.convFunc ) ;
|
---|
| 791 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 792 | os << "setConvFunc: elapsed time is " << t1-t0 << " sec." << LogIO::POST ;
|
---|
| 793 |
|
---|
| 794 | // for performance check
|
---|
| 795 | eGetData_ = 0.0 ;
|
---|
| 796 | eToPixel_ = 0.0 ;
|
---|
| 797 | eGGridSD_ = 0.0 ;
|
---|
| 798 | double eInitPol = 0.0 ;
|
---|
| 799 |
|
---|
| 800 | for ( uInt ifile = 0 ; ifile < nfile_ ; ifile++ ) {
|
---|
| 801 | initTable( ifile ) ;
|
---|
| 802 |
|
---|
| 803 | os << "start table " << ifile << ": " << infileList_[ifile] << LogIO::POST ;
|
---|
[2398] | 804 | Broker broker = Broker(produceChunk, consumeChunkWithClipping);
|
---|
[2396] | 805 | for ( Int ipol = 0 ; ipol < npol_ ; ipol++ ) {
|
---|
| 806 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 807 | initPol( ipol ) ; // set ptab_ and attach()
|
---|
| 808 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 809 | eInitPol += t1-t0 ;
|
---|
| 810 |
|
---|
| 811 | STContextWithClipping context(this, common, ipol);
|
---|
| 812 |
|
---|
| 813 | os << "start pol " << ipol << LogIO::POST ;
|
---|
| 814 |
|
---|
| 815 | nprocessed_ = 0 ;
|
---|
| 816 | #if 1
|
---|
| 817 | broker.runProducerAsMasterThread(&context, DO_AHEAD);
|
---|
| 818 | #else
|
---|
| 819 | for (;;) {
|
---|
| 820 | bool produced = produceChunk(&context);
|
---|
| 821 | if (! produced) {
|
---|
| 822 | break;
|
---|
| 823 | }
|
---|
| 824 | consumeChunkWithClipping(&context);
|
---|
| 825 | }
|
---|
| 826 | #endif
|
---|
| 827 |
|
---|
| 828 | os << "end pol " << ipol << LogIO::POST ;
|
---|
| 829 |
|
---|
| 830 | }
|
---|
| 831 | os << "end table " << ifile << LogIO::POST ;
|
---|
| 832 | }
|
---|
| 833 | os << "initPol: elapsed time is " << eInitPol << " sec." << LogIO::POST ;
|
---|
| 834 | os << "getData: elapsed time is " << eGetData_-eToInt-eGetWeight << " sec." << LogIO::POST ;
|
---|
| 835 | os << "toPixel: elapsed time is " << eToPixel_ << " sec." << LogIO::POST ;
|
---|
[2397] | 836 | os << "ggridsd2: elapsed time is " << eGGridSD_ << " sec." << LogIO::POST ;
|
---|
[2396] | 837 | os << "toInt: elapsed time is " << eToInt << " sec." << LogIO::POST ;
|
---|
| 838 | os << "getWeight: elapsed time is " << eGetWeight << " sec." << LogIO::POST ;
|
---|
| 839 |
|
---|
| 840 | delete chanMap ;
|
---|
| 841 |
|
---|
| 842 | // clip min and max in each grid
|
---|
| 843 | // os << "BEFORE CLIPPING" << LogIO::POST ;
|
---|
| 844 | // os << "gdataArrC=" << common.gdataArrC << LogIO::POST ;
|
---|
| 845 | // os << "gwgtArr=" << common.gwgtArr << LogIO::POST ;
|
---|
| 846 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 847 | clipMinMax( common.gdataArrC,
|
---|
| 848 | common.gwgtArr,
|
---|
| 849 | common.npoints,
|
---|
| 850 | common.clipMin,
|
---|
| 851 | common.clipWMin,
|
---|
| 852 | common.clipCMin,
|
---|
| 853 | common.clipMax,
|
---|
| 854 | common.clipWMax,
|
---|
| 855 | common.clipCMax ) ;
|
---|
| 856 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 857 | os << "clipMinMax: elapsed time is " << t1-t0 << " sec." << LogIO::POST ;
|
---|
| 858 | // os << "AFTER CLIPPING" << LogIO::POST ;
|
---|
| 859 | // os << "gdataArrC=" << common.gdataArrC << LogIO::POST ;
|
---|
| 860 | // os << "gwgtArr=" << common.gwgtArr << LogIO::POST ;
|
---|
| 861 |
|
---|
| 862 | // set data
|
---|
| 863 | setData( common.gdataArrC, common.gwgtArr ) ;
|
---|
| 864 |
|
---|
| 865 | }
|
---|
| 866 |
|
---|
| 867 | void STGrid::clipMinMax( Array<Complex> &grid,
|
---|
| 868 | Array<Float> &weight,
|
---|
| 869 | Array<Int> &npoints,
|
---|
| 870 | Array<Complex> &clipmin,
|
---|
| 871 | Array<Float> &clipwmin,
|
---|
| 872 | Array<Float> &clipcmin,
|
---|
| 873 | Array<Complex> &clipmax,
|
---|
| 874 | Array<Float> &clipwmax,
|
---|
| 875 | Array<Float> &clipcmax )
|
---|
| 876 | {
|
---|
| 877 | //LogIO os( LogOrigin("STGrid","clipMinMax",WHERE) ) ;
|
---|
| 878 |
|
---|
| 879 | // prepare pointers
|
---|
| 880 | Bool delG, delW, delNP, delCMin, delCWMin, delCCMin, delCMax, delCWMax, delCCMax ;
|
---|
| 881 | Complex *grid_p = grid.getStorage( delG ) ;
|
---|
| 882 | Float *wgt_p = weight.getStorage( delW ) ;
|
---|
| 883 | const Int *npts_p = npoints.getStorage( delNP ) ;
|
---|
| 884 | const Complex *cmin_p = clipmin.getStorage( delCMin ) ;
|
---|
| 885 | const Float *cwmin_p = clipwmin.getStorage( delCWMin ) ;
|
---|
| 886 | const Float *ccmin_p = clipcmin.getStorage( delCCMin ) ;
|
---|
| 887 | const Complex *cmax_p = clipmax.getStorage( delCMax ) ;
|
---|
| 888 | const Float *cwmax_p = clipwmax.getStorage( delCWMax ) ;
|
---|
| 889 | const Float *ccmax_p = clipcmax.getStorage( delCCMax ) ;
|
---|
| 890 |
|
---|
| 891 | const IPosition &gshape = grid.shape() ;
|
---|
| 892 | long offset = gshape[0] * gshape[1] * gshape[2] ; // nx * ny * npol
|
---|
| 893 | Int nchan = gshape[3] ;
|
---|
| 894 | long origin = nchan * offset ;
|
---|
| 895 | for ( long i = 0 ; i < offset ; i++ ) {
|
---|
| 896 | if ( *npts_p > 2 ) {
|
---|
| 897 | for ( Int ichan = 0 ; ichan < nchan ; ichan++ ) {
|
---|
| 898 | // clip minimum and maximum
|
---|
| 899 | *grid_p -= (*cmin_p)*(*cwmin_p)*(*ccmin_p)
|
---|
| 900 | + (*cmax_p)*(*cwmax_p)*(*ccmax_p) ;
|
---|
| 901 | *wgt_p -= (*cwmin_p)*(*ccmin_p)
|
---|
| 902 | + (*cwmax_p)*(*ccmax_p) ;
|
---|
| 903 |
|
---|
| 904 | grid_p += offset ;
|
---|
| 905 | wgt_p += offset ;
|
---|
| 906 | cmin_p += offset ;
|
---|
| 907 | cwmin_p += offset ;
|
---|
| 908 | ccmin_p += offset ;
|
---|
| 909 | cmax_p += offset ;
|
---|
| 910 | cwmax_p += offset ;
|
---|
| 911 | ccmax_p += offset ;
|
---|
| 912 | }
|
---|
| 913 | grid_p -= origin ;
|
---|
| 914 | wgt_p -= origin ;
|
---|
| 915 | cmin_p -= origin ;
|
---|
| 916 | cwmin_p -= origin ;
|
---|
| 917 | ccmin_p -= origin ;
|
---|
| 918 | cmax_p -= origin ;
|
---|
| 919 | cwmax_p -= origin ;
|
---|
| 920 | ccmax_p -= origin ;
|
---|
| 921 | }
|
---|
| 922 | grid_p++ ;
|
---|
| 923 | wgt_p++ ;
|
---|
| 924 | npts_p++ ;
|
---|
| 925 | cmin_p++ ;
|
---|
| 926 | cwmin_p++ ;
|
---|
| 927 | ccmin_p++ ;
|
---|
| 928 | cmax_p++ ;
|
---|
| 929 | cwmax_p++ ;
|
---|
| 930 | ccmax_p++ ;
|
---|
| 931 | }
|
---|
| 932 | grid_p -= offset ;
|
---|
| 933 | wgt_p -= offset ;
|
---|
| 934 | npts_p -= offset ;
|
---|
| 935 | cmin_p -= offset ;
|
---|
| 936 | cwmin_p -= offset ;
|
---|
| 937 | ccmin_p -= offset ;
|
---|
| 938 | cmax_p -= offset ;
|
---|
| 939 | cwmax_p -= offset ;
|
---|
| 940 | ccmax_p -= offset ;
|
---|
| 941 |
|
---|
| 942 | // finalization
|
---|
| 943 | grid.putStorage( grid_p, delG ) ;
|
---|
| 944 | weight.putStorage( wgt_p, delW ) ;
|
---|
| 945 | npoints.freeStorage( npts_p, delNP ) ;
|
---|
| 946 | clipmin.freeStorage( cmin_p, delCMin ) ;
|
---|
| 947 | clipwmin.freeStorage( cwmin_p, delCWMin ) ;
|
---|
| 948 | clipcmin.freeStorage( ccmin_p, delCCMin ) ;
|
---|
| 949 | clipmax.freeStorage( cmax_p, delCMax ) ;
|
---|
| 950 | clipwmax.freeStorage( cwmax_p, delCWMax ) ;
|
---|
| 951 | clipcmax.freeStorage( ccmax_p, delCCMax ) ;
|
---|
| 952 | }
|
---|
| 953 |
|
---|
[2382] | 954 | void STGrid::initPol( Int ipol )
|
---|
| 955 | {
|
---|
[2386] | 956 | LogIO os( LogOrigin("STGrid","initPol",WHERE) ) ;
|
---|
| 957 | if ( npolOrg_ == 1 ) {
|
---|
| 958 | os << "single polarization data." << LogIO::POST ;
|
---|
[2385] | 959 | ptab_ = tab_ ;
|
---|
[2386] | 960 | }
|
---|
[2385] | 961 | else
|
---|
| 962 | ptab_ = tab_( tab_.col("POLNO") == (uInt)ipol ) ;
|
---|
[2382] | 963 |
|
---|
| 964 | attach( ptab_ ) ;
|
---|
| 965 | }
|
---|
| 966 |
|
---|
[2390] | 967 | void STGrid::initTable( uInt idx )
|
---|
| 968 | {
|
---|
| 969 | tab_ = tableList_[idx] ;
|
---|
| 970 | nrow_ = rows_[idx] ;
|
---|
[2398] | 971 | updateChunkShape() ;
|
---|
[2390] | 972 | }
|
---|
| 973 |
|
---|
[2378] | 974 | void STGrid::setData( Array<Complex> &gdata,
|
---|
[2368] | 975 | Array<Float> &gwgt )
|
---|
| 976 | {
|
---|
[2378] | 977 | // 2011/12/20 TN
|
---|
| 978 | // gwgt and data_ share storage
|
---|
[2368] | 979 | LogIO os( LogOrigin("STGrid","setData",WHERE) ) ;
|
---|
| 980 | double t0, t1 ;
|
---|
| 981 | t0 = mathutil::gettimeofday_sec() ;
|
---|
[2378] | 982 | uInt len = data_.nelements() ;
|
---|
[2374] | 983 | const Complex *w1_p ;
|
---|
[2378] | 984 | Float *w2_p ;
|
---|
[2379] | 985 | Bool b1, b2 ;
|
---|
[2374] | 986 | const Complex *gdata_p = gdata.getStorage( b1 ) ;
|
---|
[2378] | 987 | Float *gwgt_p = data_.getStorage( b2 ) ;
|
---|
[2368] | 988 | w1_p = gdata_p ;
|
---|
| 989 | w2_p = gwgt_p ;
|
---|
| 990 | for ( uInt i = 0 ; i < len ; i++ ) {
|
---|
[2378] | 991 | if ( *w2_p > 0.0 ) *w2_p = (*w1_p).real() / *w2_p ;
|
---|
[2368] | 992 | w1_p++ ;
|
---|
| 993 | w2_p++ ;
|
---|
| 994 | }
|
---|
| 995 | gdata.freeStorage( gdata_p, b1 ) ;
|
---|
[2378] | 996 | data_.putStorage( gwgt_p, b2 ) ;
|
---|
[2368] | 997 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 998 | os << "setData: elapsed time is " << t1-t0 << " sec." << LogIO::POST ;
|
---|
| 999 | }
|
---|
| 1000 |
|
---|
[2388] | 1001 | void STGrid::setupGrid()
|
---|
| 1002 | {
|
---|
| 1003 | Double xmin,xmax,ymin,ymax ;
|
---|
| 1004 | mapExtent( xmin, xmax, ymin, ymax ) ;
|
---|
| 1005 |
|
---|
| 1006 | setupGrid( nxUI_, nyUI_, cellxUI_, cellyUI_,
|
---|
| 1007 | xmin, xmax, ymin, ymax, centerUI_ ) ;
|
---|
| 1008 | }
|
---|
| 1009 |
|
---|
[2356] | 1010 | void STGrid::setupGrid( Int &nx,
|
---|
| 1011 | Int &ny,
|
---|
| 1012 | String &cellx,
|
---|
| 1013 | String &celly,
|
---|
| 1014 | Double &xmin,
|
---|
| 1015 | Double &xmax,
|
---|
| 1016 | Double &ymin,
|
---|
| 1017 | Double &ymax,
|
---|
| 1018 | String ¢er )
|
---|
| 1019 | {
|
---|
[2375] | 1020 | LogIO os( LogOrigin("STGrid","setupGrid",WHERE) ) ;
|
---|
[2356] | 1021 | //cout << "nx=" << nx << ", ny=" << ny << endl ;
|
---|
[2359] | 1022 |
|
---|
| 1023 | // center position
|
---|
| 1024 | if ( center.size() == 0 ) {
|
---|
| 1025 | center_(0) = 0.5 * ( xmin + xmax ) ;
|
---|
| 1026 | center_(1) = 0.5 * ( ymin + ymax ) ;
|
---|
| 1027 | }
|
---|
| 1028 | else {
|
---|
| 1029 | String::size_type pos0 = center.find( " " ) ;
|
---|
| 1030 | if ( pos0 == String::npos ) {
|
---|
| 1031 | throw AipsError( "bad string format in parameter center" ) ;
|
---|
| 1032 | }
|
---|
| 1033 | String::size_type pos1 = center.find( " ", pos0+1 ) ;
|
---|
| 1034 | String typestr, xstr, ystr ;
|
---|
| 1035 | if ( pos1 != String::npos ) {
|
---|
| 1036 | typestr = center.substr( 0, pos0 ) ;
|
---|
| 1037 | xstr = center.substr( pos0+1, pos1-pos0 ) ;
|
---|
| 1038 | ystr = center.substr( pos1+1 ) ;
|
---|
| 1039 | // todo: convert to J2000 (or direction ref for DIRECTION column)
|
---|
| 1040 | }
|
---|
| 1041 | else {
|
---|
| 1042 | typestr = "J2000" ;
|
---|
| 1043 | xstr = center.substr( 0, pos0 ) ;
|
---|
| 1044 | ystr = center.substr( pos0+1 ) ;
|
---|
| 1045 | }
|
---|
| 1046 | QuantumHolder qh ;
|
---|
| 1047 | String err ;
|
---|
| 1048 | qh.fromString( err, xstr ) ;
|
---|
| 1049 | Quantum<Double> xcen = qh.asQuantumDouble() ;
|
---|
| 1050 | qh.fromString( err, ystr ) ;
|
---|
| 1051 | Quantum<Double> ycen = qh.asQuantumDouble() ;
|
---|
| 1052 | center_(0) = xcen.getValue( "rad" ) ;
|
---|
| 1053 | center_(1) = ycen.getValue( "rad" ) ;
|
---|
| 1054 | }
|
---|
| 1055 |
|
---|
| 1056 |
|
---|
[2356] | 1057 | nx_ = nx ;
|
---|
| 1058 | ny_ = ny ;
|
---|
| 1059 | if ( nx < 0 && ny > 0 ) {
|
---|
| 1060 | nx_ = ny ;
|
---|
| 1061 | ny_ = ny ;
|
---|
| 1062 | }
|
---|
| 1063 | if ( ny < 0 && nx > 0 ) {
|
---|
| 1064 | nx_ = nx ;
|
---|
| 1065 | ny_ = nx ;
|
---|
| 1066 | }
|
---|
[2375] | 1067 |
|
---|
| 1068 | //Double wx = xmax - xmin ;
|
---|
| 1069 | //Double wy = ymax - ymin ;
|
---|
| 1070 | Double wx = max( abs(xmax-center_(0)), abs(xmin-center_(0)) ) * 2 ;
|
---|
| 1071 | Double wy = max( abs(ymax-center_(1)), abs(ymin-center_(1)) ) * 2 ;
|
---|
| 1072 | // take 10% margin
|
---|
| 1073 | wx *= 1.10 ;
|
---|
| 1074 | wy *= 1.10 ;
|
---|
| 1075 |
|
---|
| 1076 | Quantum<Double> qcellx ;
|
---|
| 1077 | Quantum<Double> qcelly ;
|
---|
[2356] | 1078 | //cout << "nx_ = " << nx_ << ", ny_ = " << ny_ << endl ;
|
---|
| 1079 | if ( cellx.size() != 0 && celly.size() != 0 ) {
|
---|
| 1080 | readQuantity( qcellx, cellx ) ;
|
---|
| 1081 | readQuantity( qcelly, celly ) ;
|
---|
| 1082 | }
|
---|
| 1083 | else if ( celly.size() != 0 ) {
|
---|
[2375] | 1084 | os << "Using celly to x-axis..." << LogIO::POST ;
|
---|
[2356] | 1085 | readQuantity( qcelly, celly ) ;
|
---|
| 1086 | qcellx = qcelly ;
|
---|
| 1087 | }
|
---|
| 1088 | else if ( cellx.size() != 0 ) {
|
---|
[2375] | 1089 | os << "Using cellx to y-axis..." << LogIO::POST ;
|
---|
[2356] | 1090 | readQuantity( qcellx, cellx ) ;
|
---|
| 1091 | qcelly = qcellx ;
|
---|
| 1092 | }
|
---|
| 1093 | else {
|
---|
| 1094 | if ( nx_ < 0 ) {
|
---|
[2375] | 1095 | os << "No user preference in grid setting. Using default..." << LogIO::POST ;
|
---|
[2356] | 1096 | readQuantity( qcellx, "1.0arcmin" ) ;
|
---|
| 1097 | qcelly = qcellx ;
|
---|
| 1098 | }
|
---|
| 1099 | else {
|
---|
[2375] | 1100 | if ( wx == 0.0 ) {
|
---|
| 1101 | os << "Using default spatial extent (10arcmin) in x" << LogIO::POST ;
|
---|
| 1102 | wx = 0.00290888 ;
|
---|
| 1103 | }
|
---|
| 1104 | if ( wy == 0.0 ) {
|
---|
| 1105 | os << "Using default spatial extent (10arcmin) in y" << LogIO::POST ;
|
---|
| 1106 | wy = 0.00290888 ;
|
---|
| 1107 | }
|
---|
[2356] | 1108 | qcellx = Quantum<Double>( wx/nx_, "rad" ) ;
|
---|
| 1109 | qcelly = Quantum<Double>( wy/ny_, "rad" ) ;
|
---|
| 1110 | }
|
---|
| 1111 | }
|
---|
| 1112 | cellx_ = qcellx.getValue( "rad" ) ;
|
---|
| 1113 | celly_ = qcelly.getValue( "rad" ) ;
|
---|
| 1114 | if ( nx_ < 0 ) {
|
---|
[2375] | 1115 | if ( wx == 0.0 ) {
|
---|
| 1116 | os << "Using default spatial extent (10arcmin) in x" << LogIO::POST ;
|
---|
| 1117 | wx = 0.00290888 ;
|
---|
| 1118 | }
|
---|
| 1119 | if ( wy == 0.0 ) {
|
---|
| 1120 | os << "Using default spatial extent (10arcmin) in y" << LogIO::POST ;
|
---|
| 1121 | wy = 0.00290888 ;
|
---|
| 1122 | }
|
---|
[2356] | 1123 | nx_ = Int( ceil( wx/cellx_ ) ) ;
|
---|
| 1124 | ny_ = Int( ceil( wy/celly_ ) ) ;
|
---|
| 1125 | }
|
---|
| 1126 | }
|
---|
| 1127 |
|
---|
[2388] | 1128 | void STGrid::mapExtent( Double &xmin, Double &xmax,
|
---|
| 1129 | Double &ymin, Double &ymax )
|
---|
| 1130 | {
|
---|
| 1131 | //LogIO os( LogOrigin("STGrid","mapExtent",WHERE) ) ;
|
---|
[2390] | 1132 | directionCol_.attach( tableList_[0], "DIRECTION" ) ;
|
---|
| 1133 | Matrix<Double> direction = directionCol_.getColumn() ;
|
---|
[2388] | 1134 | //os << "dirCol.nrow() = " << dirCol.nrow() << LogIO::POST ;
|
---|
| 1135 | minMax( xmin, xmax, direction.row( 0 ) ) ;
|
---|
| 1136 | minMax( ymin, ymax, direction.row( 1 ) ) ;
|
---|
[2390] | 1137 | Double amin, amax, bmin, bmax ;
|
---|
| 1138 | for ( uInt i = 1 ; i < nfile_ ; i++ ) {
|
---|
| 1139 | directionCol_.attach( tableList_[i], "DIRECTION" ) ;
|
---|
| 1140 | direction.assign( directionCol_.getColumn() ) ;
|
---|
| 1141 | //os << "dirCol.nrow() = " << dirCol.nrow() << LogIO::POST ;
|
---|
| 1142 | minMax( amin, amax, direction.row( 0 ) ) ;
|
---|
| 1143 | minMax( bmin, bmax, direction.row( 1 ) ) ;
|
---|
| 1144 | xmin = min( xmin, amin ) ;
|
---|
| 1145 | xmax = max( xmax, amax ) ;
|
---|
| 1146 | ymin = min( ymin, bmin ) ;
|
---|
| 1147 | ymax = max( ymax, bmax ) ;
|
---|
| 1148 | }
|
---|
[2388] | 1149 | //os << "(xmin,xmax)=(" << xmin << "," << xmax << ")" << LogIO::POST ;
|
---|
| 1150 | //os << "(ymin,ymax)=(" << ymin << "," << ymax << ")" << LogIO::POST ;
|
---|
| 1151 | }
|
---|
| 1152 |
|
---|
[2379] | 1153 | void STGrid::selectData()
|
---|
[2362] | 1154 | {
|
---|
[2386] | 1155 | LogIO os( LogOrigin("STGrid","selectData",WHERE) ) ;
|
---|
[2362] | 1156 | Int ifno = ifno_ ;
|
---|
[2390] | 1157 | tableList_.resize( nfile_ ) ;
|
---|
[2393] | 1158 | if ( ifno == -1 ) {
|
---|
| 1159 | Table taborg( infileList_[0] ) ;
|
---|
| 1160 | ROScalarColumn<uInt> ifnoCol( taborg, "IFNO" ) ;
|
---|
| 1161 | ifno = ifnoCol( 0 ) ;
|
---|
| 1162 | os << LogIO::WARN
|
---|
| 1163 | << "IFNO is not given. Using default IFNO: " << ifno << LogIO::POST ;
|
---|
| 1164 | }
|
---|
[2390] | 1165 | for ( uInt i = 0 ; i < nfile_ ; i++ ) {
|
---|
[2389] | 1166 | Table taborg( infileList_[i] ) ;
|
---|
| 1167 | TableExprNode node ;
|
---|
| 1168 | if ( isMultiIF( taborg ) ) {
|
---|
| 1169 | os << "apply selection on IFNO" << LogIO::POST ;
|
---|
| 1170 | node = taborg.col("IFNO") == ifno ;
|
---|
| 1171 | }
|
---|
| 1172 | if ( scanlist_.size() > 0 ) {
|
---|
| 1173 | os << "apply selection on SCANNO" << LogIO::POST ;
|
---|
| 1174 | node = node && taborg.col("SCANNO").in( scanlist_ ) ;
|
---|
| 1175 | }
|
---|
| 1176 | if ( node.isNull() ) {
|
---|
| 1177 | tableList_[i] = taborg ;
|
---|
| 1178 | }
|
---|
| 1179 | else {
|
---|
| 1180 | tableList_[i] = taborg( node ) ;
|
---|
| 1181 | }
|
---|
[2393] | 1182 | os << "tableList_[" << i << "].nrow()=" << tableList_[i].nrow() << LogIO::POST ;
|
---|
[2389] | 1183 | if ( tableList_[i].nrow() == 0 ) {
|
---|
| 1184 | os << LogIO::SEVERE
|
---|
| 1185 | << "No corresponding rows for given selection: IFNO " << ifno ;
|
---|
| 1186 | if ( scanlist_.size() > 0 )
|
---|
| 1187 | os << " SCANNO " << scanlist_ ;
|
---|
| 1188 | os << LogIO::EXCEPTION ;
|
---|
| 1189 | }
|
---|
[2362] | 1190 | }
|
---|
| 1191 | }
|
---|
| 1192 |
|
---|
[2386] | 1193 | Bool STGrid::isMultiIF( Table &tab )
|
---|
| 1194 | {
|
---|
| 1195 | ROScalarColumn<uInt> ifnoCol( tab, "IFNO" ) ;
|
---|
| 1196 | Vector<uInt> ifnos = ifnoCol.getColumn() ;
|
---|
| 1197 | return anyNE( ifnos, ifnos[0] ) ;
|
---|
| 1198 | }
|
---|
| 1199 |
|
---|
[2382] | 1200 | void STGrid::attach( Table &tab )
|
---|
[2379] | 1201 | {
|
---|
| 1202 | // attach to table
|
---|
[2382] | 1203 | spectraCol_.attach( tab, "SPECTRA" ) ;
|
---|
| 1204 | flagtraCol_.attach( tab, "FLAGTRA" ) ;
|
---|
| 1205 | directionCol_.attach( tab, "DIRECTION" ) ;
|
---|
| 1206 | flagRowCol_.attach( tab, "FLAGROW" ) ;
|
---|
| 1207 | tsysCol_.attach( tab, "TSYS" ) ;
|
---|
| 1208 | intervalCol_.attach( tab, "INTERVAL" ) ;
|
---|
[2379] | 1209 | }
|
---|
| 1210 |
|
---|
[2393] | 1211 | Int STGrid::getDataChunk(
|
---|
| 1212 | IPosition const &wshape,
|
---|
| 1213 | IPosition const &vshape,
|
---|
| 1214 | IPosition const &dshape,
|
---|
| 1215 | Array<Complex> &spectra,
|
---|
| 1216 | Array<Double> &direction,
|
---|
| 1217 | Array<Int> &flagtra,
|
---|
| 1218 | Array<Int> &rflag,
|
---|
| 1219 | Array<Float> &weight )
|
---|
| 1220 | {
|
---|
| 1221 | LogIO os( LogOrigin("STGrid","getDataChunk",WHERE) ) ;
|
---|
| 1222 |
|
---|
| 1223 | Array<Float> spectraF_(wshape);
|
---|
| 1224 | Array<uChar> flagtraUC_(wshape);
|
---|
| 1225 | Array<uInt> rflagUI_(vshape);
|
---|
| 1226 | Int nrow = getDataChunk( spectraF_, direction, flagtraUC_, rflagUI_, weight ) ;
|
---|
| 1227 | if ( nrow < nchunk_ ) {
|
---|
| 1228 | spectra.resize( spectraF_.shape() ) ;
|
---|
| 1229 | flagtra.resize( flagtraUC_.shape() ) ;
|
---|
| 1230 | rflag.resize( rflagUI_.shape() ) ;
|
---|
| 1231 | }
|
---|
| 1232 | double t0, t1 ;
|
---|
| 1233 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 1234 | convertArray( spectra, spectraF_ ) ;
|
---|
| 1235 | toInt( flagtraUC_, flagtra ) ;
|
---|
| 1236 | toInt( rflagUI_, rflag ) ;
|
---|
| 1237 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 1238 | eToInt = t1 - t0 ;
|
---|
| 1239 |
|
---|
| 1240 | return nrow ;
|
---|
| 1241 | }
|
---|
| 1242 |
|
---|
| 1243 | #if 0
|
---|
[2379] | 1244 | Int STGrid::getDataChunk( Array<Complex> &spectra,
|
---|
| 1245 | Array<Double> &direction,
|
---|
| 1246 | Array<Int> &flagtra,
|
---|
| 1247 | Array<Int> &rflag,
|
---|
| 1248 | Array<Float> &weight )
|
---|
[2378] | 1249 | {
|
---|
[2385] | 1250 | LogIO os( LogOrigin("STGrid","getDataChunk",WHERE) ) ;
|
---|
[2381] | 1251 | Int nrow = getDataChunk( spectraF_, direction, flagtraUC_, rflagUI_, weight ) ;
|
---|
[2383] | 1252 | if ( nrow < nchunk_ ) {
|
---|
| 1253 | spectra.resize( spectraF_.shape() ) ;
|
---|
| 1254 | flagtra.resize( flagtraUC_.shape() ) ;
|
---|
| 1255 | rflag.resize( rflagUI_.shape() ) ;
|
---|
| 1256 | }
|
---|
[2381] | 1257 | double t0, t1 ;
|
---|
| 1258 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 1259 | convertArray( spectra, spectraF_ ) ;
|
---|
[2382] | 1260 | toInt( flagtraUC_, flagtra ) ;
|
---|
| 1261 | toInt( rflagUI_, rflag ) ;
|
---|
[2381] | 1262 | t1 = mathutil::gettimeofday_sec() ;
|
---|
[2384] | 1263 | eToInt = t1 - t0 ;
|
---|
[2381] | 1264 |
|
---|
[2379] | 1265 | return nrow ;
|
---|
[2378] | 1266 | }
|
---|
[2393] | 1267 | #endif
|
---|
[2378] | 1268 |
|
---|
[2379] | 1269 | Int STGrid::getDataChunk( Array<Float> &spectra,
|
---|
| 1270 | Array<Double> &direction,
|
---|
| 1271 | Array<uChar> &flagtra,
|
---|
| 1272 | Array<uInt> &rflag,
|
---|
| 1273 | Array<Float> &weight )
|
---|
[2375] | 1274 | {
|
---|
[2379] | 1275 | LogIO os( LogOrigin("STGrid","getDataChunk",WHERE) ) ;
|
---|
[2383] | 1276 | Int nrow = spectra.shape()[1] ;
|
---|
| 1277 | Int remainingRow = nrow_ - nprocessed_ ;
|
---|
| 1278 | if ( remainingRow < nrow ) {
|
---|
| 1279 | nrow = remainingRow ;
|
---|
| 1280 | IPosition mshape( 2, nchan_, nrow ) ;
|
---|
| 1281 | IPosition vshape( 1, nrow ) ;
|
---|
| 1282 | spectra.resize( mshape ) ;
|
---|
| 1283 | flagtra.resize( mshape ) ;
|
---|
| 1284 | direction.resize( IPosition(2,2,nrow) ) ;
|
---|
| 1285 | rflag.resize( vshape ) ;
|
---|
| 1286 | weight.resize( mshape ) ;
|
---|
[2379] | 1287 | }
|
---|
[2383] | 1288 | // 2011/12/22 TN
|
---|
| 1289 | // tsys shares its storage with weight
|
---|
| 1290 | Array<Float> tsys( weight ) ;
|
---|
| 1291 | Array<Double> tint( rflag.shape() ) ;
|
---|
[2380] | 1292 |
|
---|
[2383] | 1293 | Vector<uInt> rflagVec( rflag ) ;
|
---|
| 1294 | Vector<Double> tintVec( tint ) ;
|
---|
[2379] | 1295 |
|
---|
[2383] | 1296 | RefRows rows( nprocessed_, nprocessed_+nrow-1, 1 ) ;
|
---|
[2386] | 1297 | //os<<LogIO::DEBUGGING<<"nprocessed_="<<nprocessed_<<": rows.nrows()="<<rows.nrows()<<LogIO::POST ;
|
---|
[2383] | 1298 | spectraCol_.getColumnCells( rows, spectra ) ;
|
---|
| 1299 | flagtraCol_.getColumnCells( rows, flagtra ) ;
|
---|
| 1300 | directionCol_.getColumnCells( rows, direction ) ;
|
---|
| 1301 | flagRowCol_.getColumnCells( rows, rflagVec ) ;
|
---|
| 1302 | intervalCol_.getColumnCells( rows, tintVec ) ;
|
---|
| 1303 | Vector<Float> tsysTemp = tsysCol_( nprocessed_ ) ;
|
---|
| 1304 | if ( tsysTemp.nelements() == (uInt)nchan_ )
|
---|
| 1305 | tsysCol_.getColumnCells( rows, tsys ) ;
|
---|
| 1306 | else
|
---|
| 1307 | tsys = tsysTemp[0] ;
|
---|
[2385] | 1308 |
|
---|
[2384] | 1309 | double t0,t1 ;
|
---|
| 1310 | t0 = mathutil::gettimeofday_sec() ;
|
---|
[2379] | 1311 | getWeight( weight, tsys, tint ) ;
|
---|
[2384] | 1312 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 1313 | eGetWeight += t1-t0 ;
|
---|
[2379] | 1314 |
|
---|
| 1315 | nprocessed_ += nrow ;
|
---|
| 1316 |
|
---|
| 1317 | return nrow ;
|
---|
| 1318 | }
|
---|
| 1319 |
|
---|
| 1320 | void STGrid::setupArray()
|
---|
| 1321 | {
|
---|
[2376] | 1322 | LogIO os( LogOrigin("STGrid","setupArray",WHERE) ) ;
|
---|
[2390] | 1323 | ROScalarColumn<uInt> polnoCol( tableList_[0], "POLNO" ) ;
|
---|
[2371] | 1324 | Vector<uInt> pols = polnoCol.getColumn() ;
|
---|
[2376] | 1325 | //os << pols << LogIO::POST ;
|
---|
[2371] | 1326 | Vector<uInt> pollistOrg ;
|
---|
[2386] | 1327 | npolOrg_ = 0 ;
|
---|
[2371] | 1328 | uInt polno ;
|
---|
| 1329 | for ( uInt i = 0 ; i < polnoCol.nrow() ; i++ ) {
|
---|
[2393] | 1330 | //polno = polnoCol( i ) ;
|
---|
[2371] | 1331 | polno = pols( i ) ;
|
---|
| 1332 | if ( allNE( pollistOrg, polno ) ) {
|
---|
[2386] | 1333 | pollistOrg.resize( npolOrg_+1, True ) ;
|
---|
| 1334 | pollistOrg[npolOrg_] = polno ;
|
---|
| 1335 | npolOrg_++ ;
|
---|
[2371] | 1336 | }
|
---|
| 1337 | }
|
---|
| 1338 | if ( pollist_.size() == 0 )
|
---|
| 1339 | pollist_ = pollistOrg ;
|
---|
| 1340 | else {
|
---|
| 1341 | Vector<uInt> newlist ;
|
---|
| 1342 | uInt newsize = 0 ;
|
---|
| 1343 | for ( uInt i = 0 ; i < pollist_.size() ; i++ ) {
|
---|
| 1344 | if ( anyEQ( pollistOrg, pollist_[i] ) ) {
|
---|
| 1345 | newlist.resize( newsize+1, True ) ;
|
---|
| 1346 | newlist[newsize] = pollist_[i] ;
|
---|
| 1347 | newsize++ ;
|
---|
| 1348 | }
|
---|
| 1349 | }
|
---|
| 1350 | pollist_.assign( newlist ) ;
|
---|
| 1351 | }
|
---|
| 1352 | npol_ = pollist_.size() ;
|
---|
| 1353 | if ( npol_ == 0 ) {
|
---|
| 1354 | os << LogIO::SEVERE << "Empty pollist" << LogIO::EXCEPTION ;
|
---|
| 1355 | }
|
---|
[2390] | 1356 | rows_.resize( nfile_ ) ;
|
---|
| 1357 | for ( uInt i = 0 ; i < nfile_ ; i++ ) {
|
---|
| 1358 | rows_[i] = tableList_[i].nrow() / npolOrg_ ;
|
---|
[2398] | 1359 | //if ( nrow_ < rows_[i] )
|
---|
| 1360 | // nrow_ = rows_[i] ;
|
---|
[2390] | 1361 | }
|
---|
| 1362 | flagtraCol_.attach( tableList_[0], "FLAGTRA" ) ;
|
---|
| 1363 | nchan_ = flagtraCol_( 0 ).nelements() ;
|
---|
[2371] | 1364 | // os << "npol_ = " << npol_ << "(" << pollist_ << ")" << endl
|
---|
| 1365 | // << "nchan_ = " << nchan_ << endl
|
---|
| 1366 | // << "nrow_ = " << nrow_ << LogIO::POST ;
|
---|
| 1367 | }
|
---|
| 1368 |
|
---|
[2375] | 1369 | void STGrid::getWeight( Array<Float> &w,
|
---|
[2382] | 1370 | Array<Float> &tsys,
|
---|
| 1371 | Array<Double> &tint )
|
---|
| 1372 | {
|
---|
[2383] | 1373 | LogIO os( LogOrigin("STGrid","getWeight",WHERE) ) ;
|
---|
[2384] | 1374 |
|
---|
[2382] | 1375 | // 2011/12/22 TN
|
---|
| 1376 | // w (weight) and tsys share storage
|
---|
| 1377 | IPosition refShape = tsys.shape() ;
|
---|
| 1378 | Int nchan = refShape[0] ;
|
---|
| 1379 | Int nrow = refShape[1] ;
|
---|
| 1380 | // os << "nchan=" << nchan << ", nrow=" << nrow << LogIO::POST ;
|
---|
| 1381 | // os << "w.shape()=" << w.shape() << endl
|
---|
| 1382 | // << "tsys.shape()=" << tsys.shape() << endl
|
---|
| 1383 | // << "tint.shape()=" << tint.shape() << LogIO::POST ;
|
---|
| 1384 |
|
---|
| 1385 | // set weight
|
---|
| 1386 | if ( wtype_.compare( "UNIFORM" ) == 0 ) {
|
---|
| 1387 | w = 1.0 ;
|
---|
| 1388 | }
|
---|
| 1389 | else if ( wtype_.compare( "TINT" ) == 0 ) {
|
---|
| 1390 | Bool b0, b1 ;
|
---|
| 1391 | Float *w_p = w.getStorage( b0 ) ;
|
---|
| 1392 | Float *w0_p = w_p ;
|
---|
| 1393 | const Double *ti_p = tint.getStorage( b1 ) ;
|
---|
| 1394 | const Double *w1_p = ti_p ;
|
---|
| 1395 | for ( Int irow = 0 ; irow < nrow ; irow++ ) {
|
---|
| 1396 | for ( Int ichan = 0 ; ichan < nchan ; ichan++ ) {
|
---|
| 1397 | *w0_p = *w1_p ;
|
---|
| 1398 | w0_p++ ;
|
---|
| 1399 | }
|
---|
| 1400 | w1_p++ ;
|
---|
| 1401 | }
|
---|
| 1402 | w.putStorage( w_p, b0 ) ;
|
---|
| 1403 | tint.freeStorage( ti_p, b1 ) ;
|
---|
| 1404 | }
|
---|
| 1405 | else if ( wtype_.compare( "TSYS" ) == 0 ) {
|
---|
| 1406 | Bool b0 ;
|
---|
| 1407 | Float *w_p = w.getStorage( b0 ) ;
|
---|
| 1408 | Float *w0_p = w_p ;
|
---|
| 1409 | for ( Int irow = 0 ; irow < nrow ; irow++ ) {
|
---|
| 1410 | for ( Int ichan = 0 ; ichan < nchan ; ichan++ ) {
|
---|
| 1411 | Float temp = *w0_p ;
|
---|
| 1412 | *w0_p = 1.0 / ( temp * temp ) ;
|
---|
| 1413 | w0_p++ ;
|
---|
| 1414 | }
|
---|
| 1415 | }
|
---|
| 1416 | w.putStorage( w_p, b0 ) ;
|
---|
| 1417 | }
|
---|
| 1418 | else if ( wtype_.compare( "TINTSYS" ) == 0 ) {
|
---|
| 1419 | Bool b0, b1 ;
|
---|
| 1420 | Float *w_p = w.getStorage( b0 ) ;
|
---|
| 1421 | Float *w0_p = w_p ;
|
---|
| 1422 | const Double *ti_p = tint.getStorage( b1 ) ;
|
---|
| 1423 | const Double *w1_p = ti_p ;
|
---|
| 1424 | for ( Int irow = 0 ; irow < nrow ; irow++ ) {
|
---|
| 1425 | Float interval = *w1_p ;
|
---|
| 1426 | for ( Int ichan = 0 ; ichan < nchan ; ichan++ ) {
|
---|
| 1427 | Float temp = *w0_p ;
|
---|
| 1428 | *w0_p = interval / ( temp * temp ) ;
|
---|
| 1429 | w0_p++ ;
|
---|
| 1430 | }
|
---|
| 1431 | w1_p++ ;
|
---|
| 1432 | }
|
---|
| 1433 | w.putStorage( w_p, b0 ) ;
|
---|
| 1434 | tint.freeStorage( ti_p, b1 ) ;
|
---|
| 1435 | }
|
---|
| 1436 | else {
|
---|
| 1437 | //LogIO os( LogOrigin("STGrid", "getWeight", WHERE) ) ;
|
---|
| 1438 | //os << LogIO::WARN << "Unsupported weight type '" << wtype_ << "', apply UNIFORM weight" << LogIO::POST ;
|
---|
| 1439 | w = 1.0 ;
|
---|
| 1440 | }
|
---|
| 1441 | }
|
---|
| 1442 |
|
---|
[2375] | 1443 | void STGrid::toInt( Array<uChar> &u, Array<Int> &v )
|
---|
[2356] | 1444 | {
|
---|
[2375] | 1445 | uInt len = u.nelements() ;
|
---|
[2356] | 1446 | Int *int_p = new Int[len] ;
|
---|
| 1447 | Bool deleteIt ;
|
---|
[2375] | 1448 | const uChar *data_p = u.getStorage( deleteIt ) ;
|
---|
[2356] | 1449 | Int *i_p = int_p ;
|
---|
| 1450 | const uChar *u_p = data_p ;
|
---|
| 1451 | for ( uInt i = 0 ; i < len ; i++ ) {
|
---|
| 1452 | *i_p = ( *u_p == 0 ) ? 0 : 1 ;
|
---|
| 1453 | i_p++ ;
|
---|
| 1454 | u_p++ ;
|
---|
| 1455 | }
|
---|
[2375] | 1456 | u.freeStorage( data_p, deleteIt ) ;
|
---|
| 1457 | v.takeStorage( u.shape(), int_p, TAKE_OVER ) ;
|
---|
[2356] | 1458 | }
|
---|
| 1459 |
|
---|
[2375] | 1460 | void STGrid::toInt( Array<uInt> &u, Array<Int> &v )
|
---|
[2356] | 1461 | {
|
---|
[2375] | 1462 | uInt len = u.nelements() ;
|
---|
[2356] | 1463 | Int *int_p = new Int[len] ;
|
---|
| 1464 | Bool deleteIt ;
|
---|
[2375] | 1465 | const uInt *data_p = u.getStorage( deleteIt ) ;
|
---|
[2356] | 1466 | Int *i_p = int_p ;
|
---|
| 1467 | const uInt *u_p = data_p ;
|
---|
| 1468 | for ( uInt i = 0 ; i < len ; i++ ) {
|
---|
| 1469 | *i_p = ( *u_p == 0 ) ? 0 : 1 ;
|
---|
| 1470 | i_p++ ;
|
---|
| 1471 | u_p++ ;
|
---|
| 1472 | }
|
---|
[2375] | 1473 | u.freeStorage( data_p, deleteIt ) ;
|
---|
| 1474 | v.takeStorage( u.shape(), int_p, TAKE_OVER ) ;
|
---|
[2356] | 1475 | }
|
---|
| 1476 |
|
---|
[2375] | 1477 | void STGrid::toPixel( Array<Double> &world, Array<Double> &pixel )
|
---|
[2356] | 1478 | {
|
---|
[2359] | 1479 | // gridding will be done on (nx_+2*convSupport_) x (ny_+2*convSupport_)
|
---|
| 1480 | // grid plane to avoid unexpected behavior on grid edge
|
---|
[2375] | 1481 | Block<Double> pixc( 2 ) ;
|
---|
| 1482 | pixc[0] = Double( nx_-1 ) * 0.5 ;
|
---|
| 1483 | pixc[1] = Double( ny_-1 ) * 0.5 ;
|
---|
| 1484 | // pixc[0] = Double( nx_+2*convSupport_-1 ) * 0.5 ;
|
---|
| 1485 | // pixc[1] = Double( ny_+2*convSupport_-1 ) * 0.5 ;
|
---|
[2356] | 1486 | uInt nrow = world.shape()[1] ;
|
---|
[2375] | 1487 | Bool bw, bp ;
|
---|
| 1488 | const Double *w_p = world.getStorage( bw ) ;
|
---|
| 1489 | Double *p_p = pixel.getStorage( bp ) ;
|
---|
| 1490 | const Double *ww_p = w_p ;
|
---|
| 1491 | Double *wp_p = p_p ;
|
---|
| 1492 | for ( uInt i = 0 ; i < nrow ; i++ ) {
|
---|
| 1493 | *wp_p = pixc[0] + ( *ww_p - center_[0] ) / cellx_ ;
|
---|
| 1494 | wp_p++ ;
|
---|
| 1495 | ww_p++ ;
|
---|
| 1496 | *wp_p = pixc[1] + ( *ww_p - center_[1] ) / celly_ ;
|
---|
| 1497 | wp_p++ ;
|
---|
| 1498 | ww_p++ ;
|
---|
[2356] | 1499 | }
|
---|
[2375] | 1500 | world.freeStorage( w_p, bw ) ;
|
---|
| 1501 | pixel.putStorage( p_p, bp ) ;
|
---|
[2356] | 1502 | }
|
---|
| 1503 |
|
---|
| 1504 | void STGrid::boxFunc( Vector<Float> &convFunc, Int &convSize )
|
---|
| 1505 | {
|
---|
| 1506 | convFunc = 0.0 ;
|
---|
| 1507 | for ( Int i = 0 ; i < convSize/2 ; i++ )
|
---|
| 1508 | convFunc(i) = 1.0 ;
|
---|
| 1509 | }
|
---|
| 1510 |
|
---|
| 1511 | #define NEED_UNDERSCORES
|
---|
| 1512 | #if defined(NEED_UNDERSCORES)
|
---|
| 1513 | #define grdsf grdsf_
|
---|
| 1514 | #endif
|
---|
| 1515 | extern "C" {
|
---|
| 1516 | void grdsf(Double*, Double*);
|
---|
| 1517 | }
|
---|
| 1518 | void STGrid::spheroidalFunc( Vector<Float> &convFunc )
|
---|
| 1519 | {
|
---|
| 1520 | convFunc = 0.0 ;
|
---|
| 1521 | for ( Int i = 0 ; i < convSampling_*convSupport_ ; i++ ) {
|
---|
| 1522 | Double nu = Double(i) / Double(convSupport_*convSampling_) ;
|
---|
| 1523 | Double val ;
|
---|
| 1524 | grdsf( &nu, &val ) ;
|
---|
| 1525 | convFunc(i) = ( 1.0 - nu * nu ) * val ;
|
---|
| 1526 | }
|
---|
| 1527 | }
|
---|
| 1528 |
|
---|
| 1529 | void STGrid::gaussFunc( Vector<Float> &convFunc )
|
---|
| 1530 | {
|
---|
| 1531 | convFunc = 0.0 ;
|
---|
[2363] | 1532 | // HWHM of the Gaussian is convSupport_ / 4
|
---|
| 1533 | // To take into account Gaussian tail, kernel cutoff is set to 4 * HWHM
|
---|
| 1534 | Int len = convSampling_ * convSupport_ ;
|
---|
| 1535 | Double hwhm = len * 0.25 ;
|
---|
| 1536 | for ( Int i = 0 ; i < len ; i++ ) {
|
---|
[2356] | 1537 | Double val = Double(i) / hwhm ;
|
---|
| 1538 | convFunc(i) = exp( -log(2)*val*val ) ;
|
---|
| 1539 | }
|
---|
| 1540 | }
|
---|
| 1541 |
|
---|
| 1542 | void STGrid::pbFunc( Vector<Float> &convFunc )
|
---|
| 1543 | {
|
---|
| 1544 | convFunc = 0.0 ;
|
---|
| 1545 | }
|
---|
| 1546 |
|
---|
| 1547 | void STGrid::setConvFunc( Vector<Float> &convFunc )
|
---|
| 1548 | {
|
---|
| 1549 | convSupport_ = userSupport_ ;
|
---|
| 1550 | if ( convType_ == "BOX" ) {
|
---|
| 1551 | if ( convSupport_ < 0 )
|
---|
| 1552 | convSupport_ = 0 ;
|
---|
| 1553 | Int convSize = convSampling_ * ( 2 * convSupport_ + 2 ) ;
|
---|
| 1554 | convFunc.resize( convSize ) ;
|
---|
| 1555 | boxFunc( convFunc, convSize ) ;
|
---|
| 1556 | }
|
---|
| 1557 | else if ( convType_ == "SF" ) {
|
---|
| 1558 | if ( convSupport_ < 0 )
|
---|
| 1559 | convSupport_ = 3 ;
|
---|
| 1560 | Int convSize = convSampling_ * ( 2 * convSupport_ + 2 ) ;
|
---|
| 1561 | convFunc.resize( convSize ) ;
|
---|
| 1562 | spheroidalFunc( convFunc ) ;
|
---|
| 1563 | }
|
---|
| 1564 | else if ( convType_ == "GAUSS" ) {
|
---|
[2363] | 1565 | // to take into account Gaussian tail
|
---|
[2356] | 1566 | if ( convSupport_ < 0 )
|
---|
[2363] | 1567 | convSupport_ = 12 ; // 3 * 4
|
---|
| 1568 | else {
|
---|
| 1569 | convSupport_ = userSupport_ * 4 ;
|
---|
| 1570 | }
|
---|
[2356] | 1571 | Int convSize = convSampling_ * ( 2 * convSupport_ + 2 ) ;
|
---|
| 1572 | convFunc.resize( convSize ) ;
|
---|
| 1573 | gaussFunc( convFunc ) ;
|
---|
| 1574 | }
|
---|
[2359] | 1575 | else if ( convType_ == "PB" ) {
|
---|
| 1576 | if ( convSupport_ < 0 )
|
---|
| 1577 | convSupport_ = 0 ;
|
---|
[2356] | 1578 | pbFunc( convFunc ) ;
|
---|
[2359] | 1579 | }
|
---|
[2356] | 1580 | else {
|
---|
| 1581 | throw AipsError( "Unsupported convolution function" ) ;
|
---|
| 1582 | }
|
---|
| 1583 | }
|
---|
| 1584 |
|
---|
| 1585 | string STGrid::saveData( string outfile )
|
---|
| 1586 | {
|
---|
[2368] | 1587 | LogIO os( LogOrigin("STGrid", "saveData", WHERE) ) ;
|
---|
| 1588 | double t0, t1 ;
|
---|
| 1589 | t0 = mathutil::gettimeofday_sec() ;
|
---|
| 1590 |
|
---|
[2393] | 1591 | //Int polno = 0 ;
|
---|
[2371] | 1592 | String outfile_ ;
|
---|
[2356] | 1593 | if ( outfile.size() == 0 ) {
|
---|
[2389] | 1594 | if ( infileList_[0].lastchar() == '/' ) {
|
---|
| 1595 | outfile_ = infileList_[0].substr( 0, infileList_[0].size()-1 ) ;
|
---|
[2356] | 1596 | }
|
---|
| 1597 | else {
|
---|
[2389] | 1598 | outfile_ = infileList_[0] ;
|
---|
[2356] | 1599 | }
|
---|
| 1600 | outfile_ += ".grid" ;
|
---|
| 1601 | }
|
---|
| 1602 | else {
|
---|
| 1603 | outfile_ = outfile ;
|
---|
| 1604 | }
|
---|
[2371] | 1605 | Table tab ;
|
---|
| 1606 | prepareTable( tab, outfile_ ) ;
|
---|
[2356] | 1607 | IPosition dshape = data_.shape() ;
|
---|
[2361] | 1608 | Int nrow = nx_ * ny_ * npol_ ;
|
---|
| 1609 | tab.rwKeywordSet().define( "nPol", npol_ ) ;
|
---|
[2360] | 1610 | tab.addRow( nrow ) ;
|
---|
[2356] | 1611 | Vector<Double> cpix( 2 ) ;
|
---|
| 1612 | cpix(0) = Double( nx_ - 1 ) * 0.5 ;
|
---|
| 1613 | cpix(1) = Double( ny_ - 1 ) * 0.5 ;
|
---|
| 1614 | Vector<Double> dir( 2 ) ;
|
---|
| 1615 | ArrayColumn<Double> directionCol( tab, "DIRECTION" ) ;
|
---|
| 1616 | ArrayColumn<Float> spectraCol( tab, "SPECTRA" ) ;
|
---|
| 1617 | ScalarColumn<uInt> polnoCol( tab, "POLNO" ) ;
|
---|
| 1618 | Int irow = 0 ;
|
---|
[2371] | 1619 | Vector<Float> sp( nchan_ ) ;
|
---|
| 1620 | Bool bsp, bdata ;
|
---|
| 1621 | const Float *data_p = data_.getStorage( bdata ) ;
|
---|
| 1622 | Float *wsp_p, *sp_p ;
|
---|
| 1623 | const Float *wdata_p = data_p ;
|
---|
| 1624 | long step = nx_ * ny_ * npol_ ;
|
---|
| 1625 | long offset ;
|
---|
[2356] | 1626 | for ( Int iy = 0 ; iy < ny_ ; iy++ ) {
|
---|
[2371] | 1627 | dir(1) = center_(1) - ( cpix(1) - (Double)iy ) * celly_ ;
|
---|
[2356] | 1628 | for ( Int ix = 0 ; ix < nx_ ; ix++ ) {
|
---|
[2371] | 1629 | dir(0) = center_(0) - ( cpix(0) - (Double)ix ) * cellx_ ;
|
---|
[2361] | 1630 | for ( Int ipol = 0 ; ipol < npol_ ; ipol++ ) {
|
---|
[2371] | 1631 | offset = ix + iy * nx_ + ipol * nx_ * ny_ ;
|
---|
| 1632 | //os << "offset = " << offset << LogIO::POST ;
|
---|
| 1633 | sp_p = sp.getStorage( bsp ) ;
|
---|
| 1634 | wsp_p = sp_p ;
|
---|
| 1635 | wdata_p = data_p + offset ;
|
---|
| 1636 | for ( Int ichan = 0 ; ichan < nchan_ ; ichan++ ) {
|
---|
| 1637 | *wsp_p = *wdata_p ;
|
---|
| 1638 | wsp_p++ ;
|
---|
| 1639 | wdata_p += step ;
|
---|
| 1640 | }
|
---|
| 1641 | sp.putStorage( sp_p, bsp ) ;
|
---|
[2356] | 1642 | spectraCol.put( irow, sp ) ;
|
---|
| 1643 | directionCol.put( irow, dir ) ;
|
---|
[2360] | 1644 | polnoCol.put( irow, pollist_[ipol] ) ;
|
---|
[2356] | 1645 | irow++ ;
|
---|
| 1646 | }
|
---|
| 1647 | }
|
---|
| 1648 | }
|
---|
[2371] | 1649 | data_.freeStorage( data_p, bdata ) ;
|
---|
[2368] | 1650 |
|
---|
| 1651 | t1 = mathutil::gettimeofday_sec() ;
|
---|
| 1652 | os << "saveData: elapsed time is " << t1-t0 << " sec." << LogIO::POST ;
|
---|
[2374] | 1653 |
|
---|
[2356] | 1654 | return outfile_ ;
|
---|
| 1655 | }
|
---|
| 1656 |
|
---|
[2371] | 1657 | void STGrid::prepareTable( Table &tab, String &name )
|
---|
| 1658 | {
|
---|
[2389] | 1659 | Table t( infileList_[0], Table::Old ) ;
|
---|
[2371] | 1660 | t.deepCopy( name, Table::New, False, t.endianFormat(), True ) ;
|
---|
| 1661 | tab = Table( name, Table::Update ) ;
|
---|
[2356] | 1662 | }
|
---|
[2379] | 1663 |
|
---|
[2371] | 1664 | }
|
---|