[2738] | 1 | //
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| 2 | // C++ Implementation: STBaselineTable
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| 3 | //
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| 4 | // Description:
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| 5 | //
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| 6 | //
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| 7 | // Author: Wataru Kawasaki <wataru.kawasaki@nao.ac.jp> (C) 2013
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| 8 | //
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| 9 | // Copyright: See COPYING file that comes with this distribution
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| 10 | //
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| 11 | //
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| 12 | #include <assert.h>
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| 13 |
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| 14 | #include <casa/Exceptions/Error.h>
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| 15 | #include <casa/OS/Path.h>
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| 16 | #include <tables/Tables/TableDesc.h>
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| 17 | #include <tables/Tables/SetupNewTab.h>
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| 18 | #include <tables/Tables/ArrColDesc.h>
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| 19 | #include <tables/Tables/ScaColDesc.h>
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| 20 | #include <tables/Tables/TableRecord.h>
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| 21 | #include <measures/TableMeasures/TableMeasDesc.h>
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| 22 | #include <measures/TableMeasures/TableMeasRefDesc.h>
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| 23 | #include <measures/TableMeasures/TableMeasValueDesc.h>
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| 24 |
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| 25 | #include "Scantable.h"
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| 26 | #include "STBaselineTable.h"
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| 27 |
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| 28 |
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| 29 | using namespace casa;
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| 30 |
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| 31 | namespace asap {
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| 32 |
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| 33 | const String STBaselineTable::name_ = "APPLY_BASELINE";
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| 34 |
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| 35 | STBaselineTable::STBaselineTable(const Scantable& parent)
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| 36 | : STApplyTable(parent, name_)
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| 37 | {
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| 38 | setup();
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| 39 | }
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| 40 |
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| 41 | STBaselineTable::STBaselineTable(const String &name)
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| 42 | : STApplyTable(name)
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| 43 | {
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| 44 | attachOptionalColumns();
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| 45 | }
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| 46 |
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| 47 | STBaselineTable::~STBaselineTable()
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| 48 | {
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| 49 | }
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| 50 |
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| 51 | void STBaselineTable::setup()
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| 52 | {
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[2767] | 53 | table_.addColumn(ScalarColumnDesc<Bool>("APPLY"));
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[2740] | 54 | table_.addColumn(ScalarColumnDesc<uInt>("FUNC_TYPE"));
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[2767] | 55 | table_.addColumn(ArrayColumnDesc<Int>("FUNC_PARAM"));
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[2740] | 56 | table_.addColumn(ArrayColumnDesc<Float>("FUNC_FPARAM"));
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| 57 | table_.addColumn(ArrayColumnDesc<uInt>("MASKLIST"));
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| 58 | table_.addColumn(ArrayColumnDesc<Float>("RESULT"));
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[2738] | 59 | table_.addColumn(ScalarColumnDesc<Float>("RMS"));
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[2767] | 60 | table_.addColumn(ScalarColumnDesc<uInt>("NCHAN"));
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| 61 | table_.addColumn(ScalarColumnDesc<Float>("CLIP_THRESHOLD"));
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| 62 | table_.addColumn(ScalarColumnDesc<uInt>("CLIP_ITERATION"));
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| 63 | table_.addColumn(ScalarColumnDesc<Float>("LF_THRESHOLD"));
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| 64 | table_.addColumn(ScalarColumnDesc<uInt>("LF_AVERAGE"));
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| 65 | table_.addColumn(ArrayColumnDesc<uInt>("LF_EDGE"));
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[2738] | 66 |
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| 67 | table_.rwKeywordSet().define("ApplyType", "BASELINE");
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| 68 |
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| 69 | attachOptionalColumns();
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| 70 | }
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| 71 |
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| 72 | void STBaselineTable::attachOptionalColumns()
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| 73 | {
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[2767] | 74 | applyCol_.attach(table_, "APPLY");
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[2740] | 75 | ftypeCol_.attach(table_, "FUNC_TYPE");
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| 76 | fparCol_.attach(table_, "FUNC_PARAM");
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| 77 | ffparCol_.attach(table_, "FUNC_FPARAM");
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[2738] | 78 | maskCol_.attach(table_, "MASKLIST");
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[2740] | 79 | resCol_.attach(table_, "RESULT");
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[2738] | 80 | rmsCol_.attach(table_, "RMS");
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[2767] | 81 | nchanCol_.attach(table_, "NCHAN");
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| 82 | cthresCol_.attach(table_, "CLIP_THRESHOLD");
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| 83 | citerCol_.attach(table_, "CLIP_ITERATION");
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| 84 | lfthresCol_.attach(table_, "LF_THRESHOLD");
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| 85 | lfavgCol_.attach(table_, "LF_AVERAGE");
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| 86 | lfedgeCol_.attach(table_, "LF_EDGE");
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[2738] | 87 | }
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| 88 |
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| 89 | void STBaselineTable::save(const std::string &filename)
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| 90 | {
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| 91 | String inname(filename);
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| 92 | Path path(inname);
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| 93 | inname = path.expandedName();
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| 94 | table_.deepCopy(inname, Table::New);
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| 95 | }
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| 96 |
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| 97 | void STBaselineTable::setdata(uInt irow, uInt scanno, uInt cycleno,
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[2740] | 98 | uInt beamno, uInt ifno, uInt polno,
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| 99 | uInt freqid, Double time,
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[2767] | 100 | Bool apply,
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[2740] | 101 | STBaselineFunc::FuncName ftype,
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[2767] | 102 | Vector<Int> fpar,
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[2740] | 103 | Vector<Float> ffpar,
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| 104 | Vector<uInt> mask,
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| 105 | Vector<Float> res,
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[2767] | 106 | Float rms,
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| 107 | uInt nchan,
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| 108 | Float cthres,
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| 109 | uInt citer,
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| 110 | Float lfthres,
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| 111 | uInt lfavg,
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| 112 | Vector<uInt> lfedge)
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[2738] | 113 | {
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| 114 | if (irow >= (uInt)nrow()) {
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| 115 | throw AipsError("row index out of range");
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| 116 | }
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| 117 |
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| 118 | if (!sel_.empty()) {
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| 119 | os_.origin(LogOrigin("STBaselineTable","setdata",WHERE));
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| 120 | os_ << LogIO::WARN << "Data selection is effective. Specified row index may be wrong." << LogIO::POST;
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| 121 | }
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| 122 |
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| 123 | setbasedata(irow, scanno, cycleno, beamno, ifno, polno, freqid, time);
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[2767] | 124 | applyCol_.put(irow, apply);
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[2740] | 125 | ftypeCol_.put(irow, uInt(ftype));
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| 126 | fparCol_.put(irow, fpar);
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| 127 | ffparCol_.put(irow, ffpar);
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[2738] | 128 | maskCol_.put(irow, mask);
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[2740] | 129 | resCol_.put(irow, res);
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[2738] | 130 | rmsCol_.put(irow, rms);
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[2767] | 131 | nchanCol_.put(irow, nchan);
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| 132 | cthresCol_.put(irow, cthres);
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| 133 | citerCol_.put(irow, citer);
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| 134 | lfthresCol_.put(irow, lfthres);
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| 135 | lfavgCol_.put(irow, lfavg);
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| 136 | lfedgeCol_.put(irow, lfedge);
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[2738] | 137 | }
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| 138 |
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[2773] | 139 | void STBaselineTable::appenddata(int scanno, int cycleno,
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| 140 | int beamno, int ifno, int polno,
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| 141 | int freqid, Double time,
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| 142 | bool apply,
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| 143 | STBaselineFunc::FuncName ftype,
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| 144 | int fpar,
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| 145 | vector<float> ffpar,
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| 146 | Vector<uInt> mask,
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| 147 | vector<float> res,
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| 148 | float rms,
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| 149 | int nchan,
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| 150 | float cthres,
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| 151 | int citer,
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| 152 | float lfthres,
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| 153 | int lfavg,
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| 154 | vector<int> lfedge)
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| 155 | {
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| 156 | vector<int> fparam(1);
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| 157 | fparam[0] = fpar;
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| 158 |
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| 159 | appenddata(scanno, cycleno, beamno, ifno, polno, freqid, time,
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| 160 | apply, ftype, fparam, ffpar, mask, res, rms, nchan,
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| 161 | cthres, citer, lfthres, lfavg, lfedge);
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| 162 | }
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| 163 |
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| 164 | void STBaselineTable::appenddata(int scanno, int cycleno,
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| 165 | int beamno, int ifno, int polno,
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| 166 | int freqid, Double time,
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| 167 | bool apply,
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| 168 | STBaselineFunc::FuncName ftype,
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| 169 | vector<int> fpar,
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| 170 | vector<float> ffpar,
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| 171 | Vector<uInt> mask,
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| 172 | vector<float> res,
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| 173 | float rms,
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| 174 | int nchan,
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| 175 | float cthres,
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| 176 | int citer,
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| 177 | float lfthres,
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| 178 | int lfavg,
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| 179 | vector<int> lfedge)
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| 180 | {
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| 181 | Vector<Int> fparam(fpar.size());
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| 182 | for (uInt i = 0; i < fpar.size(); ++i) {
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| 183 | fparam[i] = fpar[i];
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| 184 | }
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| 185 | Vector<uInt> edge(lfedge.size());
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| 186 | for (uInt i = 0; i < lfedge.size(); ++i) {
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| 187 | edge[i] = lfedge[i];
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| 188 | }
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| 189 | appenddata(uInt(scanno), uInt(cycleno), uInt(beamno),
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| 190 | uInt(ifno), uInt(polno), uInt(freqid), time,
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| 191 | Bool(apply), ftype, fparam, Vector<Float>(ffpar),
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| 192 | mask, Vector<Float>(res), Float(rms), uInt(nchan),
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| 193 | Float(cthres), uInt(citer),
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| 194 | Float(lfthres), uInt(lfavg), edge);
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| 195 | }
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| 196 |
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[2738] | 197 | void STBaselineTable::appenddata(uInt scanno, uInt cycleno,
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[2740] | 198 | uInt beamno, uInt ifno, uInt polno,
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| 199 | uInt freqid, Double time,
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[2767] | 200 | Bool apply,
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[2740] | 201 | STBaselineFunc::FuncName ftype,
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[2767] | 202 | Vector<Int> fpar,
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[2740] | 203 | Vector<Float> ffpar,
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| 204 | Vector<uInt> mask,
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| 205 | Vector<Float> res,
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[2767] | 206 | Float rms,
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| 207 | uInt nchan,
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| 208 | Float cthres,
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| 209 | uInt citer,
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| 210 | Float lfthres,
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| 211 | uInt lfavg,
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| 212 | Vector<uInt> lfedge)
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[2738] | 213 | {
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| 214 | uInt irow = nrow();
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| 215 | table_.addRow(1, True);
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| 216 | setdata(irow, scanno, cycleno, beamno, ifno, polno, freqid, time,
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[2767] | 217 | apply, ftype, fpar, ffpar, mask, res, rms,
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| 218 | nchan, cthres, citer, lfthres, lfavg, lfedge);
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[2738] | 219 | }
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| 220 |
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[2767] | 221 | void STBaselineTable::appendbasedata(int scanno, int cycleno,
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| 222 | int beamno, int ifno, int polno,
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| 223 | int freqid, Double time)
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[2738] | 224 | {
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[2767] | 225 | uInt irow = nrow();
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| 226 | table_.addRow(1, True);
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| 227 | setbasedata(irow, uInt(scanno), uInt(cycleno), uInt(beamno), uInt(ifno), uInt(polno), uInt(freqid), time);
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| 228 | }
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| 229 |
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| 230 | void STBaselineTable::setresult(casa::uInt irow,
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| 231 | casa::Vector<casa::Float> res,
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| 232 | casa::Float rms)
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| 233 | {
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| 234 | resCol_.put(irow, res);
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| 235 | rmsCol_.put(irow, rms);
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| 236 | }
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| 237 |
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| 238 | bool STBaselineTable::getApply(int irow)
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| 239 | {
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| 240 | return (bool)applyCol_.get(irow);
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| 241 | }
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| 242 |
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| 243 | void STBaselineTable::setApply(int irow, bool apply)
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| 244 | {
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| 245 | applyCol_.put(uInt(irow), Bool(apply));
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| 246 | }
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| 247 |
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| 248 | Vector<STBaselineFunc::FuncName> STBaselineTable::getFunctionNames()
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| 249 | {
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[2740] | 250 | Vector<uInt> rawBlfuncColumn = ftypeCol_.getColumn();
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[2738] | 251 | uInt n = rawBlfuncColumn.nelements();
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| 252 | Vector<STBaselineFunc::FuncName> blfuncColumn(n);
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| 253 | for (uInt i = 0; i < n; ++i) {
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| 254 | blfuncColumn[i] = STBaselineFunc::FuncName(rawBlfuncColumn(i));
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| 255 | }
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| 256 | return blfuncColumn;
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| 257 | }
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| 258 |
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[2767] | 259 | STBaselineFunc::FuncName STBaselineTable::getFunctionName(int irow)
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| 260 | {
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| 261 | return STBaselineFunc::FuncName(ftypeCol_.get(irow));
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| 262 | }
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| 263 |
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| 264 | std::vector<int> STBaselineTable::getFuncParam(int irow)
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| 265 | {
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| 266 | Vector<Int> uiparam = fparCol_.get(irow);
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| 267 | std::vector<int> res(uiparam.size());
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| 268 | for (uInt i = 0; i < res.size(); ++i) {
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| 269 | res[i] = (int)uiparam[i];
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| 270 | }
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| 271 | return res;
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| 272 | }
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| 273 |
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| 274 | std::vector<bool> STBaselineTable::getMask(int irow)
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| 275 | {
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| 276 | uInt nchan = getNChan(irow);
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| 277 | Vector<uInt> masklist = maskCol_.get(irow);
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| 278 | std::vector<int> masklist1(masklist.size());
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| 279 | for (uInt i = 0; i < masklist1.size(); ++i) {
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| 280 | masklist1[i] = (int)masklist[i];
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| 281 | }
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| 282 | return Scantable::getMaskFromMaskList(nchan, masklist1);
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| 283 | }
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| 284 |
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| 285 | uInt STBaselineTable::getNChan(int irow)
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| 286 | {
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| 287 | return nchanCol_.get(irow);
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| 288 | }
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| 289 |
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[2738] | 290 | uInt STBaselineTable::nchan(uInt ifno)
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| 291 | {
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| 292 | STSelector org = sel_;
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| 293 | STSelector sel;
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| 294 | sel.setIFs(vector<int>(1,(int)ifno));
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| 295 | setSelection(sel);
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| 296 | uInt n = nchanCol_(0);
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| 297 | unsetSelection();
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| 298 | if (!org.empty())
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| 299 | setSelection(org);
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| 300 | return n;
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| 301 | }
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| 302 | }
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