[2738] | 1 | // |
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| 2 | // C++ Implementation: STBaselineTable |
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| 3 | // |
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| 4 | // Description: |
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| 5 | // |
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| 6 | // |
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| 7 | // Author: Wataru Kawasaki <wataru.kawasaki@nao.ac.jp> (C) 2013 |
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| 8 | // |
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| 9 | // Copyright: See COPYING file that comes with this distribution |
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| 10 | // |
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| 11 | // |
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| 12 | #include <assert.h> |
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| 13 | |
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| 14 | #include <casa/Exceptions/Error.h> |
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| 15 | #include <casa/OS/Path.h> |
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| 16 | #include <tables/Tables/TableDesc.h> |
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| 17 | #include <tables/Tables/SetupNewTab.h> |
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| 18 | #include <tables/Tables/ArrColDesc.h> |
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| 19 | #include <tables/Tables/ScaColDesc.h> |
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| 20 | #include <tables/Tables/TableRecord.h> |
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| 21 | #include <measures/TableMeasures/TableMeasDesc.h> |
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| 22 | #include <measures/TableMeasures/TableMeasRefDesc.h> |
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| 23 | #include <measures/TableMeasures/TableMeasValueDesc.h> |
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| 24 | |
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| 25 | #include "Scantable.h" |
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| 26 | #include "STBaselineTable.h" |
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| 27 | |
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| 28 | |
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| 29 | using namespace casa; |
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| 30 | |
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| 31 | namespace asap { |
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| 32 | |
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| 33 | const String STBaselineTable::name_ = "APPLY_BASELINE"; |
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| 34 | |
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| 35 | STBaselineTable::STBaselineTable(const Scantable& parent) |
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| 36 | : STApplyTable(parent, name_) |
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| 37 | { |
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| 38 | setup(); |
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| 39 | } |
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| 40 | |
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| 41 | STBaselineTable::STBaselineTable(const String &name) |
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| 42 | : STApplyTable(name) |
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| 43 | { |
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| 44 | attachOptionalColumns(); |
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| 45 | } |
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| 46 | |
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| 47 | STBaselineTable::~STBaselineTable() |
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| 48 | { |
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| 49 | } |
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| 50 | |
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| 51 | void STBaselineTable::setup() |
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| 52 | { |
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[2767] | 53 | table_.addColumn(ScalarColumnDesc<Bool>("APPLY")); |
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[2740] | 54 | table_.addColumn(ScalarColumnDesc<uInt>("FUNC_TYPE")); |
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[2767] | 55 | table_.addColumn(ArrayColumnDesc<Int>("FUNC_PARAM")); |
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[2740] | 56 | table_.addColumn(ArrayColumnDesc<Float>("FUNC_FPARAM")); |
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| 57 | table_.addColumn(ArrayColumnDesc<uInt>("MASKLIST")); |
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| 58 | table_.addColumn(ArrayColumnDesc<Float>("RESULT")); |
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[2738] | 59 | table_.addColumn(ScalarColumnDesc<Float>("RMS")); |
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[2767] | 60 | table_.addColumn(ScalarColumnDesc<uInt>("NCHAN")); |
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| 61 | table_.addColumn(ScalarColumnDesc<Float>("CLIP_THRESHOLD")); |
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| 62 | table_.addColumn(ScalarColumnDesc<uInt>("CLIP_ITERATION")); |
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| 63 | table_.addColumn(ScalarColumnDesc<Float>("LF_THRESHOLD")); |
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| 64 | table_.addColumn(ScalarColumnDesc<uInt>("LF_AVERAGE")); |
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| 65 | table_.addColumn(ArrayColumnDesc<uInt>("LF_EDGE")); |
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[2738] | 66 | |
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| 67 | table_.rwKeywordSet().define("ApplyType", "BASELINE"); |
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| 68 | |
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| 69 | attachOptionalColumns(); |
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| 70 | } |
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| 71 | |
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| 72 | void STBaselineTable::attachOptionalColumns() |
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| 73 | { |
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[2767] | 74 | applyCol_.attach(table_, "APPLY"); |
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[2740] | 75 | ftypeCol_.attach(table_, "FUNC_TYPE"); |
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| 76 | fparCol_.attach(table_, "FUNC_PARAM"); |
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| 77 | ffparCol_.attach(table_, "FUNC_FPARAM"); |
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[2738] | 78 | maskCol_.attach(table_, "MASKLIST"); |
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[2740] | 79 | resCol_.attach(table_, "RESULT"); |
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[2738] | 80 | rmsCol_.attach(table_, "RMS"); |
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[2767] | 81 | nchanCol_.attach(table_, "NCHAN"); |
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| 82 | cthresCol_.attach(table_, "CLIP_THRESHOLD"); |
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| 83 | citerCol_.attach(table_, "CLIP_ITERATION"); |
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| 84 | lfthresCol_.attach(table_, "LF_THRESHOLD"); |
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| 85 | lfavgCol_.attach(table_, "LF_AVERAGE"); |
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| 86 | lfedgeCol_.attach(table_, "LF_EDGE"); |
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[2738] | 87 | } |
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| 88 | |
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| 89 | void STBaselineTable::save(const std::string &filename) |
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| 90 | { |
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| 91 | String inname(filename); |
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| 92 | Path path(inname); |
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| 93 | inname = path.expandedName(); |
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| 94 | table_.deepCopy(inname, Table::New); |
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| 95 | } |
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| 96 | |
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| 97 | void STBaselineTable::setdata(uInt irow, uInt scanno, uInt cycleno, |
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[2740] | 98 | uInt beamno, uInt ifno, uInt polno, |
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| 99 | uInt freqid, Double time, |
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[2767] | 100 | Bool apply, |
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[2740] | 101 | STBaselineFunc::FuncName ftype, |
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[2767] | 102 | Vector<Int> fpar, |
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[2740] | 103 | Vector<Float> ffpar, |
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| 104 | Vector<uInt> mask, |
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| 105 | Vector<Float> res, |
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[2767] | 106 | Float rms, |
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| 107 | uInt nchan, |
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| 108 | Float cthres, |
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| 109 | uInt citer, |
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| 110 | Float lfthres, |
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| 111 | uInt lfavg, |
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| 112 | Vector<uInt> lfedge) |
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[2738] | 113 | { |
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| 114 | if (irow >= (uInt)nrow()) { |
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| 115 | throw AipsError("row index out of range"); |
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| 116 | } |
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| 117 | |
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| 118 | if (!sel_.empty()) { |
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| 119 | os_.origin(LogOrigin("STBaselineTable","setdata",WHERE)); |
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| 120 | os_ << LogIO::WARN << "Data selection is effective. Specified row index may be wrong." << LogIO::POST; |
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| 121 | } |
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| 122 | |
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| 123 | setbasedata(irow, scanno, cycleno, beamno, ifno, polno, freqid, time); |
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[2767] | 124 | applyCol_.put(irow, apply); |
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[2740] | 125 | ftypeCol_.put(irow, uInt(ftype)); |
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| 126 | fparCol_.put(irow, fpar); |
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| 127 | ffparCol_.put(irow, ffpar); |
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[2738] | 128 | maskCol_.put(irow, mask); |
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[2740] | 129 | resCol_.put(irow, res); |
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[2738] | 130 | rmsCol_.put(irow, rms); |
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[2767] | 131 | nchanCol_.put(irow, nchan); |
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| 132 | cthresCol_.put(irow, cthres); |
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| 133 | citerCol_.put(irow, citer); |
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| 134 | lfthresCol_.put(irow, lfthres); |
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| 135 | lfavgCol_.put(irow, lfavg); |
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| 136 | lfedgeCol_.put(irow, lfedge); |
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[2738] | 137 | } |
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| 138 | |
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[2773] | 139 | void STBaselineTable::appenddata(int scanno, int cycleno, |
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| 140 | int beamno, int ifno, int polno, |
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| 141 | int freqid, Double time, |
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| 142 | bool apply, |
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| 143 | STBaselineFunc::FuncName ftype, |
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| 144 | int fpar, |
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| 145 | vector<float> ffpar, |
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| 146 | Vector<uInt> mask, |
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| 147 | vector<float> res, |
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| 148 | float rms, |
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| 149 | int nchan, |
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| 150 | float cthres, |
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| 151 | int citer, |
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| 152 | float lfthres, |
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| 153 | int lfavg, |
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| 154 | vector<int> lfedge) |
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| 155 | { |
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| 156 | vector<int> fparam(1); |
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| 157 | fparam[0] = fpar; |
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| 158 | |
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| 159 | appenddata(scanno, cycleno, beamno, ifno, polno, freqid, time, |
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| 160 | apply, ftype, fparam, ffpar, mask, res, rms, nchan, |
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| 161 | cthres, citer, lfthres, lfavg, lfedge); |
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| 162 | } |
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| 163 | |
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| 164 | void STBaselineTable::appenddata(int scanno, int cycleno, |
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| 165 | int beamno, int ifno, int polno, |
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| 166 | int freqid, Double time, |
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| 167 | bool apply, |
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| 168 | STBaselineFunc::FuncName ftype, |
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| 169 | vector<int> fpar, |
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| 170 | vector<float> ffpar, |
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| 171 | Vector<uInt> mask, |
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| 172 | vector<float> res, |
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| 173 | float rms, |
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| 174 | int nchan, |
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| 175 | float cthres, |
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| 176 | int citer, |
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| 177 | float lfthres, |
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| 178 | int lfavg, |
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| 179 | vector<int> lfedge) |
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| 180 | { |
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| 181 | Vector<Int> fparam(fpar.size()); |
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| 182 | for (uInt i = 0; i < fpar.size(); ++i) { |
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| 183 | fparam[i] = fpar[i]; |
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| 184 | } |
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| 185 | Vector<uInt> edge(lfedge.size()); |
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| 186 | for (uInt i = 0; i < lfedge.size(); ++i) { |
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| 187 | edge[i] = lfedge[i]; |
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| 188 | } |
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| 189 | appenddata(uInt(scanno), uInt(cycleno), uInt(beamno), |
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| 190 | uInt(ifno), uInt(polno), uInt(freqid), time, |
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| 191 | Bool(apply), ftype, fparam, Vector<Float>(ffpar), |
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| 192 | mask, Vector<Float>(res), Float(rms), uInt(nchan), |
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| 193 | Float(cthres), uInt(citer), |
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| 194 | Float(lfthres), uInt(lfavg), edge); |
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| 195 | } |
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| 196 | |
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[2738] | 197 | void STBaselineTable::appenddata(uInt scanno, uInt cycleno, |
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[2740] | 198 | uInt beamno, uInt ifno, uInt polno, |
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| 199 | uInt freqid, Double time, |
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[2767] | 200 | Bool apply, |
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[2740] | 201 | STBaselineFunc::FuncName ftype, |
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[2767] | 202 | Vector<Int> fpar, |
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[2740] | 203 | Vector<Float> ffpar, |
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| 204 | Vector<uInt> mask, |
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| 205 | Vector<Float> res, |
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[2767] | 206 | Float rms, |
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| 207 | uInt nchan, |
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| 208 | Float cthres, |
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| 209 | uInt citer, |
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| 210 | Float lfthres, |
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| 211 | uInt lfavg, |
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| 212 | Vector<uInt> lfedge) |
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[2738] | 213 | { |
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| 214 | uInt irow = nrow(); |
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| 215 | table_.addRow(1, True); |
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| 216 | setdata(irow, scanno, cycleno, beamno, ifno, polno, freqid, time, |
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[2767] | 217 | apply, ftype, fpar, ffpar, mask, res, rms, |
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| 218 | nchan, cthres, citer, lfthres, lfavg, lfedge); |
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[2738] | 219 | } |
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| 220 | |
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[2767] | 221 | void STBaselineTable::appendbasedata(int scanno, int cycleno, |
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| 222 | int beamno, int ifno, int polno, |
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| 223 | int freqid, Double time) |
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[2738] | 224 | { |
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[2767] | 225 | uInt irow = nrow(); |
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| 226 | table_.addRow(1, True); |
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| 227 | setbasedata(irow, uInt(scanno), uInt(cycleno), uInt(beamno), uInt(ifno), uInt(polno), uInt(freqid), time); |
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| 228 | } |
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| 229 | |
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| 230 | void STBaselineTable::setresult(casa::uInt irow, |
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| 231 | casa::Vector<casa::Float> res, |
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| 232 | casa::Float rms) |
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| 233 | { |
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| 234 | resCol_.put(irow, res); |
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| 235 | rmsCol_.put(irow, rms); |
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| 236 | } |
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| 237 | |
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| 238 | bool STBaselineTable::getApply(int irow) |
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| 239 | { |
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| 240 | return (bool)applyCol_.get(irow); |
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| 241 | } |
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| 242 | |
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| 243 | void STBaselineTable::setApply(int irow, bool apply) |
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| 244 | { |
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| 245 | applyCol_.put(uInt(irow), Bool(apply)); |
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| 246 | } |
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| 247 | |
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| 248 | Vector<STBaselineFunc::FuncName> STBaselineTable::getFunctionNames() |
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| 249 | { |
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[2740] | 250 | Vector<uInt> rawBlfuncColumn = ftypeCol_.getColumn(); |
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[2738] | 251 | uInt n = rawBlfuncColumn.nelements(); |
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| 252 | Vector<STBaselineFunc::FuncName> blfuncColumn(n); |
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| 253 | for (uInt i = 0; i < n; ++i) { |
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| 254 | blfuncColumn[i] = STBaselineFunc::FuncName(rawBlfuncColumn(i)); |
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| 255 | } |
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| 256 | return blfuncColumn; |
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| 257 | } |
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| 258 | |
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[2767] | 259 | STBaselineFunc::FuncName STBaselineTable::getFunctionName(int irow) |
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| 260 | { |
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| 261 | return STBaselineFunc::FuncName(ftypeCol_.get(irow)); |
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| 262 | } |
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| 263 | |
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| 264 | std::vector<int> STBaselineTable::getFuncParam(int irow) |
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| 265 | { |
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| 266 | Vector<Int> uiparam = fparCol_.get(irow); |
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| 267 | std::vector<int> res(uiparam.size()); |
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| 268 | for (uInt i = 0; i < res.size(); ++i) { |
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| 269 | res[i] = (int)uiparam[i]; |
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| 270 | } |
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| 271 | return res; |
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| 272 | } |
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| 273 | |
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| 274 | std::vector<bool> STBaselineTable::getMask(int irow) |
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| 275 | { |
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| 276 | uInt nchan = getNChan(irow); |
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| 277 | Vector<uInt> masklist = maskCol_.get(irow); |
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| 278 | std::vector<int> masklist1(masklist.size()); |
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| 279 | for (uInt i = 0; i < masklist1.size(); ++i) { |
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| 280 | masklist1[i] = (int)masklist[i]; |
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| 281 | } |
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| 282 | return Scantable::getMaskFromMaskList(nchan, masklist1); |
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| 283 | } |
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| 284 | |
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| 285 | uInt STBaselineTable::getNChan(int irow) |
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| 286 | { |
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| 287 | return nchanCol_.get(irow); |
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| 288 | } |
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| 289 | |
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[2738] | 290 | uInt STBaselineTable::nchan(uInt ifno) |
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| 291 | { |
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| 292 | STSelector org = sel_; |
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| 293 | STSelector sel; |
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| 294 | sel.setIFs(vector<int>(1,(int)ifno)); |
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| 295 | setSelection(sel); |
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| 296 | uInt n = nchanCol_(0); |
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| 297 | unsetSelection(); |
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| 298 | if (!org.empty()) |
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| 299 | setSelection(org); |
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| 300 | return n; |
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| 301 | } |
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| 302 | } |
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