source: trunk/src/SDMemTable.cc@ 319

Last change on this file since 319 was 306, checked in by kil064, 20 years ago

implement function getSDFreqTable which was empty before
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1//#---------------------------------------------------------------------------
2//# SDMemTable.cc: A MemoryTable container for single dish integrations
3//#---------------------------------------------------------------------------
4//# Copyright (C) 2004
5//# ATNF
6//#
7//# This program is free software; you can redistribute it and/or modify it
8//# under the terms of the GNU General Public License as published by the Free
9//# Software Foundation; either version 2 of the License, or (at your option)
10//# any later version.
11//#
12//# This program is distributed in the hope that it will be useful, but
13//# WITHOUT ANY WARRANTY; without even the implied warranty of
14//# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
15//# Public License for more details.
16//#
17//# You should have received a copy of the GNU General Public License along
18//# with this program; if not, write to the Free Software Foundation, Inc.,
19//# 675 Massachusetts Ave, Cambridge, MA 02139, USA.
20//#
21//# Correspondence concerning this software should be addressed as follows:
22//# Internet email: Malte.Marquarding@csiro.au
23//# Postal address: Malte Marquarding,
24//# Australia Telescope National Facility,
25//# P.O. Box 76,
26//# Epping, NSW, 2121,
27//# AUSTRALIA
28//#
29//# $Id:
30//#---------------------------------------------------------------------------
31
32#include <map>
33
34#include <casa/aips.h>
35#include <casa/iostream.h>
36#include <casa/iomanip.h>
37#include <casa/Arrays/Array.h>
38#include <casa/Arrays/ArrayMath.h>
39#include <casa/Arrays/MaskArrMath.h>
40#include <casa/Arrays/ArrayLogical.h>
41#include <casa/Arrays/ArrayAccessor.h>
42#include <casa/Arrays/Vector.h>
43#include <casa/Quanta/MVAngle.h>
44
45#include <tables/Tables/TableParse.h>
46#include <tables/Tables/TableDesc.h>
47#include <tables/Tables/SetupNewTab.h>
48#include <tables/Tables/ScaColDesc.h>
49#include <tables/Tables/ArrColDesc.h>
50
51#include <tables/Tables/ExprNode.h>
52#include <tables/Tables/ScalarColumn.h>
53#include <tables/Tables/ArrayColumn.h>
54#include <tables/Tables/TableRecord.h>
55#include <measures/Measures/MFrequency.h>
56#include <measures/Measures/MeasTable.h>
57#include <coordinates/Coordinates/CoordinateUtil.h>
58#include <casa/Quanta/MVTime.h>
59#include <casa/Quanta/MVAngle.h>
60
61#include "SDDefs.h"
62#include "SDMemTable.h"
63#include "SDContainer.h"
64
65
66using namespace casa;
67using namespace asap;
68
69SDMemTable::SDMemTable() :
70 IFSel_(0),
71 beamSel_(0),
72 polSel_(0)
73{
74 setup();
75}
76
77SDMemTable::SDMemTable(const std::string& name) :
78 IFSel_(0),
79 beamSel_(0),
80 polSel_(0)
81{
82 Table tab(name);
83 table_ = tab.copyToMemoryTable("dummy");
84 //cerr << "hello from C SDMemTable @ " << this << endl;
85}
86
87SDMemTable::SDMemTable(const SDMemTable& other, Bool clear)
88{
89 IFSel_= other.IFSel_;
90 beamSel_= other.beamSel_;
91 polSel_= other.polSel_;
92 chanMask_ = other.chanMask_;
93 table_ = other.table_.copyToMemoryTable(String("dummy"));
94 // clear all rows()
95 if (clear) {
96 table_.removeRow(this->table_.rowNumbers());
97 } else {
98 IFSel_ = other.IFSel_;
99 beamSel_ = other.beamSel_;
100 polSel_ = other.polSel_;
101 }
102 //cerr << "hello from CC SDMemTable @ " << this << endl;
103}
104
105SDMemTable::SDMemTable(const Table& tab, const std::string& exprs) :
106 IFSel_(0),
107 beamSel_(0),
108 polSel_(0)
109{
110 Table t = tableCommand(exprs,tab);
111 if (t.nrow() == 0)
112 throw(AipsError("Query unsuccessful."));
113 table_ = t.copyToMemoryTable("dummy");
114}
115
116SDMemTable::~SDMemTable()
117{
118 //cerr << "goodbye from SDMemTable @ " << this << endl;
119}
120
121SDMemTable SDMemTable::getScan(Int scanID) const
122{
123 String cond("SELECT * from $1 WHERE SCANID == ");
124 cond += String::toString(scanID);
125 return SDMemTable(table_, cond);
126}
127
128SDMemTable &SDMemTable::operator=(const SDMemTable& other)
129{
130 if (this != &other) {
131 IFSel_= other.IFSel_;
132 beamSel_= other.beamSel_;
133 polSel_= other.polSel_;
134 chanMask_.resize(0);
135 chanMask_ = other.chanMask_;
136 table_ = other.table_.copyToMemoryTable(String("dummy"));
137 }
138 //cerr << "hello from ASS SDMemTable @ " << this << endl;
139 return *this;
140}
141
142SDMemTable SDMemTable::getSource(const std::string& source) const
143{
144 String cond("SELECT * from $1 WHERE SRCNAME == ");
145 cond += source;
146 return SDMemTable(table_, cond);
147}
148
149void SDMemTable::setup()
150{
151 TableDesc td("", "1", TableDesc::Scratch);
152 td.comment() = "A SDMemTable";
153 td.addColumn(ScalarColumnDesc<Double>("TIME"));
154 td.addColumn(ScalarColumnDesc<String>("SRCNAME"));
155 td.addColumn(ArrayColumnDesc<Float>("SPECTRA"));
156 td.addColumn(ArrayColumnDesc<uChar>("FLAGTRA"));
157 td.addColumn(ArrayColumnDesc<Float>("TSYS"));
158 td.addColumn(ScalarColumnDesc<Int>("SCANID"));
159 td.addColumn(ScalarColumnDesc<Double>("INTERVAL"));
160 td.addColumn(ArrayColumnDesc<uInt>("FREQID"));
161 td.addColumn(ArrayColumnDesc<Double>("DIRECTION"));
162 td.addColumn(ScalarColumnDesc<String>("FIELDNAME"));
163 td.addColumn(ScalarColumnDesc<String>("TCALTIME"));
164 td.addColumn(ArrayColumnDesc<Float>("TCAL"));
165 td.addColumn(ScalarColumnDesc<Float>("AZIMUTH"));
166 td.addColumn(ScalarColumnDesc<Float>("ELEVATION"));
167 td.addColumn(ScalarColumnDesc<Float>("PARANGLE"));
168 td.addColumn(ScalarColumnDesc<Int>("REFBEAM"));
169 td.addColumn(ArrayColumnDesc<String>("HISTORY"));
170
171 // Now create a new table from the description.
172
173 SetupNewTable aNewTab("dummy", td, Table::New);
174 table_ = Table(aNewTab, Table::Memory, 0);
175}
176
177std::string SDMemTable::getSourceName(Int whichRow) const
178{
179 ROScalarColumn<String> src(table_, "SRCNAME");
180 String name;
181 src.get(whichRow, name);
182 return name;
183}
184
185std::string SDMemTable::getTime(Int whichRow, Bool showDate) const
186{
187 Double tm;
188 if (whichRow > -1) {
189 ROScalarColumn<Double> src(table_, "TIME");
190 src.get(whichRow, tm);
191 } else {
192 table_.keywordSet().get("UTC",tm);
193 }
194 MVTime mvt(tm);
195 if (showDate)
196 mvt.setFormat(MVTime::YMD);
197 else
198 mvt.setFormat(MVTime::TIME);
199 ostringstream oss;
200 oss << mvt;
201 return String(oss);
202}
203
204double SDMemTable::getInterval(Int whichRow) const
205{
206 ROScalarColumn<Double> src(table_, "INTERVAL");
207 Double intval;
208 src.get(whichRow, intval);
209 return intval;
210}
211
212bool SDMemTable::setIF(Int whichIF)
213{
214 if ( whichIF >= 0 && whichIF < nIF()) {
215 IFSel_ = whichIF;
216 return true;
217 }
218 return false;
219}
220
221bool SDMemTable::setBeam(Int whichBeam)
222{
223 if ( whichBeam >= 0 && whichBeam < nBeam()) {
224 beamSel_ = whichBeam;
225 return true;
226 }
227 return false;
228}
229
230bool SDMemTable::setPol(Int whichPol)
231{
232 if ( whichPol >= 0 && whichPol < nPol()) {
233 polSel_ = whichPol;
234 return true;
235 }
236 return false;
237}
238
239void SDMemTable::resetCursor ()
240{
241 polSel_ = 0;
242 IFSel_ = 0;
243 beamSel_ = 0;
244}
245
246bool SDMemTable::setMask(std::vector<int> whichChans)
247{
248 ROArrayColumn<uChar> spec(table_, "FLAGTRA");
249 std::vector<int>::iterator it;
250 uInt n = spec.shape(0)(3);
251 if (whichChans.empty()) {
252 chanMask_ = std::vector<bool>(n,true);
253 return true;
254 }
255 chanMask_.resize(n,true);
256 for (it = whichChans.begin(); it != whichChans.end(); ++it) {
257 if (*it < n) {
258 chanMask_[*it] = false;
259 }
260 }
261 return true;
262}
263
264std::vector<bool> SDMemTable::getMask(Int whichRow) const {
265 std::vector<bool> mask;
266 ROArrayColumn<uChar> spec(table_, "FLAGTRA");
267 Array<uChar> arr;
268 spec.get(whichRow, arr);
269 ArrayAccessor<uChar, Axis<asap::BeamAxis> > aa0(arr);
270 aa0.reset(aa0.begin(uInt(beamSel_)));//go to beam
271 ArrayAccessor<uChar, Axis<asap::IFAxis> > aa1(aa0);
272 aa1.reset(aa1.begin(uInt(IFSel_)));// go to IF
273 ArrayAccessor<uChar, Axis<asap::PolAxis> > aa2(aa1);
274 aa2.reset(aa2.begin(uInt(polSel_)));// go to pol
275
276 Bool useUserMask = ( chanMask_.size() == arr.shape()(3) );
277
278 std::vector<bool> tmp;
279 tmp = chanMask_; // WHY the fxxx do I have to make a copy here
280 std::vector<bool>::iterator miter;
281 miter = tmp.begin();
282
283 for (ArrayAccessor<uChar, Axis<asap::ChanAxis> > i(aa2); i != i.end(); ++i) {
284 bool out =!static_cast<bool>(*i);
285 if (useUserMask) {
286 out = out && (*miter);
287 miter++;
288 }
289 mask.push_back(out);
290 }
291 return mask;
292}
293std::vector<float> SDMemTable::getSpectrum(Int whichRow) const
294{
295 std::vector<float> spectrum;
296 ROArrayColumn<Float> spec(table_, "SPECTRA");
297 Array<Float> arr;
298 spec.get(whichRow, arr);
299 ArrayAccessor<Float, Axis<asap::BeamAxis> > aa0(arr);
300 aa0.reset(aa0.begin(uInt(beamSel_)));//go to beam
301 ArrayAccessor<Float, Axis<asap::IFAxis> > aa1(aa0);
302 aa1.reset(aa1.begin(uInt(IFSel_)));// go to IF
303 ArrayAccessor<Float, Axis<asap::PolAxis> > aa2(aa1);
304 aa2.reset(aa2.begin(uInt(polSel_)));// go to pol
305 for (ArrayAccessor<Float, Axis<asap::ChanAxis> > i(aa2); i != i.end(); ++i) {
306 spectrum.push_back(*i);
307 }
308 return spectrum;
309}
310std::vector<string> SDMemTable::getCoordInfo() const
311{
312 String un;
313 Table t = table_.keywordSet().asTable("FREQUENCIES");
314 String sunit;
315 t.keywordSet().get("UNIT",sunit);
316 String dpl;
317 t.keywordSet().get("DOPPLER",dpl);
318 if (dpl == "") dpl = "RADIO";
319 String rfrm;
320 t.keywordSet().get("REFFRAME",rfrm);
321 std::vector<string> inf;
322 inf.push_back(sunit);
323 inf.push_back(rfrm);
324 inf.push_back(dpl);
325 t.keywordSet().get("BASEREFFRAME",rfrm);
326 inf.push_back(rfrm);
327 return inf;
328}
329
330void SDMemTable::setCoordInfo(std::vector<string> theinfo)
331{
332 std::vector<string>::iterator it;
333 String un,rfrm, brfrm,dpl;
334 un = theinfo[0]; // Abcissa unit
335 rfrm = theinfo[1]; // Active (or conversion) frame
336 dpl = theinfo[2]; // Doppler
337 brfrm = theinfo[3]; // Base frame
338//
339 Table t = table_.rwKeywordSet().asTable("FREQUENCIES");
340//
341 Vector<Double> rstf;
342 t.keywordSet().get("RESTFREQS",rstf);
343//
344 Bool canDo = True;
345 Unit u1("km/s");Unit u2("Hz");
346 if (Unit(un) == u1) {
347 Vector<Double> rstf;
348 t.keywordSet().get("RESTFREQS",rstf);
349 if (rstf.nelements() == 0) {
350 throw(AipsError("Can't set unit to km/s if no restfrequencies are specified"));
351 }
352 } else if (Unit(un) != u2 && un != "") {
353 throw(AipsError("Unit not conformant with Spectral Coordinates"));
354 }
355 t.rwKeywordSet().define("UNIT", un);
356//
357 MFrequency::Types mdr;
358 if (!MFrequency::getType(mdr, rfrm)) {
359
360 Int a,b;const uInt* c;
361 const String* valid = MFrequency::allMyTypes(a, b, c);
362 String pfix = "Please specify a legal frame type. Types are\n";
363 throw(AipsError(pfix+(*valid)));
364 } else {
365 t.rwKeywordSet().define("REFFRAME",rfrm);
366 }
367//
368 MDoppler::Types dtype;
369 dpl.upcase();
370 if (!MDoppler::getType(dtype, dpl)) {
371 throw(AipsError("Doppler type unknown"));
372 } else {
373 t.rwKeywordSet().define("DOPPLER",dpl);
374 }
375//
376 if (!MFrequency::getType(mdr, brfrm)) {
377 Int a,b;const uInt* c;
378 const String* valid = MFrequency::allMyTypes(a, b, c);
379 String pfix = "Please specify a legal frame type. Types are\n";
380 throw(AipsError(pfix+(*valid)));
381 } else {
382 t.rwKeywordSet().define("BASEREFFRAME",brfrm);
383 }
384}
385
386
387std::vector<double> SDMemTable::getAbcissa(Int whichRow) const
388{
389 std::vector<double> abc(nChan());
390
391// Get header units keyword
392
393 Table t = table_.keywordSet().asTable("FREQUENCIES");
394 String sunit;
395 t.keywordSet().get("UNIT",sunit);
396 if (sunit == "") sunit = "pixel";
397 Unit u(sunit);
398
399// Easy if just wanting pixels
400
401 if (sunit==String("pixel")) {
402 // assume channels/pixels
403 std::vector<double>::iterator it;
404 uInt i=0;
405 for (it = abc.begin(); it != abc.end(); ++it) {
406 (*it) = Double(i++);
407 }
408//
409 return abc;
410 }
411
412// Continue with km/s or Hz. Get FreqID
413
414 ROArrayColumn<uInt> fid(table_, "FREQID");
415 Vector<uInt> v;
416 fid.get(whichRow, v);
417 uInt specidx = v(IFSel_);
418
419// Get SpectralCoordinate, set reference frame conversion,
420// velocity conversion, and rest freq state
421
422 SpectralCoordinate spc = getSpectralCoordinate(specidx, whichRow);
423//
424 Vector<Double> pixel(nChan());
425 indgen(pixel);
426//
427 if (u == Unit("km/s")) {
428 Vector<Double> world;
429 spc.pixelToVelocity(world,pixel);
430 std::vector<double>::iterator it;
431 uInt i = 0;
432 for (it = abc.begin(); it != abc.end(); ++it) {
433 (*it) = world[i];
434 i++;
435 }
436 } else if (u == Unit("Hz")) {
437
438// Set world axis units
439
440 Vector<String> wau(1); wau = u.getName();
441 spc.setWorldAxisUnits(wau);
442//
443 std::vector<double>::iterator it;
444 Double tmp;
445 uInt i = 0;
446 for (it = abc.begin(); it != abc.end(); ++it) {
447 spc.toWorld(tmp,pixel[i]);
448 (*it) = tmp;
449 i++;
450 }
451 }
452 return abc;
453}
454
455std::string SDMemTable::getAbcissaString(Int whichRow) const
456{
457 ROArrayColumn<uInt> fid(table_, "FREQID");
458 Table t = table_.keywordSet().asTable("FREQUENCIES");
459//
460 String sunit;
461 t.keywordSet().get("UNIT",sunit);
462 if (sunit == "") sunit = "pixel";
463 Unit u(sunit);
464//
465 Vector<uInt> v;
466 fid.get(whichRow, v);
467 uInt specidx = v(IFSel_);
468
469// Get SpectralCoordinate, with frame, velocity, rest freq state set
470
471 SpectralCoordinate spc = getSpectralCoordinate(specidx, whichRow);
472//
473 String s = "Channel";
474 if (u == Unit("km/s")) {
475 s = CoordinateUtil::axisLabel(spc,0,True,True,True);
476 } else if (u == Unit("Hz")) {
477 Vector<String> wau(1);wau = u.getName();
478 spc.setWorldAxisUnits(wau);
479//
480 s = CoordinateUtil::axisLabel(spc,0,True,True,False);
481 }
482 return s;
483}
484
485void SDMemTable::setSpectrum(std::vector<float> spectrum, int whichRow)
486{
487 ArrayColumn<Float> spec(table_, "SPECTRA");
488 Array<Float> arr;
489 spec.get(whichRow, arr);
490 if (spectrum.size() != arr.shape()(3)) {
491 throw(AipsError("Attempting to set spectrum with incorrect length."));
492 }
493
494 ArrayAccessor<Float, Axis<asap::BeamAxis> > aa0(arr);
495 aa0.reset(aa0.begin(uInt(beamSel_)));//go to beam
496 ArrayAccessor<Float, Axis<asap::IFAxis> > aa1(aa0);
497 aa1.reset(aa1.begin(uInt(IFSel_)));// go to IF
498 ArrayAccessor<Float, Axis<asap::PolAxis> > aa2(aa1);
499 aa2.reset(aa2.begin(uInt(polSel_)));// go to pol
500
501 std::vector<float>::iterator it = spectrum.begin();
502 for (ArrayAccessor<Float, Axis<asap::ChanAxis> > i(aa2); i != i.end(); ++i) {
503 (*i) = Float(*it);
504 it++;
505 }
506 spec.put(whichRow, arr);
507}
508
509void SDMemTable::getSpectrum(Vector<Float>& spectrum, Int whichRow) const
510{
511 ROArrayColumn<Float> spec(table_, "SPECTRA");
512 Array<Float> arr;
513 spec.get(whichRow, arr);
514 spectrum.resize(arr.shape()(3));
515 ArrayAccessor<Float, Axis<asap::BeamAxis> > aa0(arr);
516 aa0.reset(aa0.begin(uInt(beamSel_)));//go to beam
517 ArrayAccessor<Float, Axis<asap::IFAxis> > aa1(aa0);
518 aa1.reset(aa1.begin(uInt(IFSel_)));// go to IF
519 ArrayAccessor<Float, Axis<asap::PolAxis> > aa2(aa1);
520 aa2.reset(aa2.begin(uInt(polSel_)));// go to pol
521
522 ArrayAccessor<Float, Axis<asap::BeamAxis> > va(spectrum);
523 for (ArrayAccessor<Float, Axis<asap::ChanAxis> > i(aa2); i != i.end(); ++i) {
524 (*va) = (*i);
525 va++;
526 }
527}
528/*
529void SDMemTable::getMask(Vector<Bool>& mask, Int whichRow) const {
530 ROArrayColumn<uChar> spec(table_, "FLAGTRA");
531 Array<uChar> arr;
532 spec.get(whichRow, arr);
533 mask.resize(arr.shape()(3));
534
535 ArrayAccessor<uChar, Axis<asap::BeamAxis> > aa0(arr);
536 aa0.reset(aa0.begin(uInt(beamSel_)));//go to beam
537 ArrayAccessor<uChar, Axis<asap::IFAxis> > aa1(aa0);
538 aa1.reset(aa1.begin(uInt(IFSel_)));// go to IF
539 ArrayAccessor<uChar, Axis<asap::PolAxis> > aa2(aa1);
540 aa2.reset(aa2.begin(uInt(polSel_)));// go to pol
541
542 Bool useUserMask = ( chanMask_.size() == arr.shape()(3) );
543
544 ArrayAccessor<Bool, Axis<asap::BeamAxis> > va(mask);
545 std::vector<bool> tmp;
546 tmp = chanMask_; // WHY the fxxx do I have to make a copy here. The
547 // iterator should work on chanMask_??
548 std::vector<bool>::iterator miter;
549 miter = tmp.begin();
550
551 for (ArrayAccessor<uChar, Axis<asap::ChanAxis> > i(aa2); i != i.end(); ++i) {
552 bool out =!static_cast<bool>(*i);
553 if (useUserMask) {
554 out = out && (*miter);
555 miter++;
556 }
557 (*va) = out;
558 va++;
559 }
560}
561*/
562MaskedArray<Float> SDMemTable::rowAsMaskedArray(uInt whichRow,
563 Bool useSelection) const
564{
565 ROArrayColumn<Float> spec(table_, "SPECTRA");
566 Array<Float> arr;
567 ROArrayColumn<uChar> flag(table_, "FLAGTRA");
568 Array<uChar> farr;
569 spec.get(whichRow, arr);
570 flag.get(whichRow, farr);
571 Array<Bool> barr(farr.shape());convertArray(barr, farr);
572 MaskedArray<Float> marr;
573 if (useSelection) {
574 ArrayAccessor<Float, Axis<asap::BeamAxis> > aa0(arr);
575 aa0.reset(aa0.begin(uInt(beamSel_)));//go to beam
576 ArrayAccessor<Float, Axis<asap::IFAxis> > aa1(aa0);
577 aa1.reset(aa1.begin(uInt(IFSel_)));// go to IF
578 ArrayAccessor<Float, Axis<asap::PolAxis> > aa2(aa1);
579 aa2.reset(aa2.begin(uInt(polSel_)));// go to pol
580
581 ArrayAccessor<Bool, Axis<asap::BeamAxis> > baa0(barr);
582 baa0.reset(baa0.begin(uInt(beamSel_)));//go to beam
583 ArrayAccessor<Bool, Axis<asap::IFAxis> > baa1(baa0);
584 baa1.reset(baa1.begin(uInt(IFSel_)));// go to IF
585 ArrayAccessor<Bool, Axis<asap::PolAxis> > baa2(baa1);
586 baa2.reset(baa2.begin(uInt(polSel_)));// go to pol
587
588 Vector<Float> a(arr.shape()(3));
589 Vector<Bool> b(barr.shape()(3));
590 ArrayAccessor<Float, Axis<asap::BeamAxis> > a0(a);
591 ArrayAccessor<Bool, Axis<asap::BeamAxis> > b0(b);
592
593 ArrayAccessor<Bool, Axis<asap::ChanAxis> > j(baa2);
594 for (ArrayAccessor<Float, Axis<asap::ChanAxis> > i(aa2);
595 i != i.end(); ++i) {
596 (*a0) = (*i);
597 (*b0) = !(*j);
598 j++;
599 a0++;
600 b0++;
601 }
602 marr.setData(a,b);
603 } else {
604 marr.setData(arr,!barr);
605 }
606 return marr;
607}
608
609Float SDMemTable::getTsys(Int whichRow) const
610{
611 ROArrayColumn<Float> ts(table_, "TSYS");
612 Array<Float> arr;
613 ts.get(whichRow, arr);
614 Float out;
615 IPosition ip(arr.shape());
616 ip(0) = beamSel_;ip(1) = IFSel_;ip(2) = polSel_;ip(3)=0;
617 out = arr(ip);
618 return out;
619}
620
621MDirection SDMemTable::getDirection(Int whichRow, Bool refBeam) const
622{
623 MDirection::Types mdr = getDirectionReference();
624 ROArrayColumn<Double> dir(table_, "DIRECTION");
625 Array<Double> posit;
626 dir.get(whichRow,posit);
627 Vector<Double> wpos(2);
628 wpos[0] = posit(IPosition(2,beamSel_,0));
629 wpos[1] = posit(IPosition(2,beamSel_,1));
630 Quantum<Double> lon(wpos[0],Unit(String("rad")));
631 Quantum<Double> lat(wpos[1],Unit(String("rad")));
632 return MDirection(lon, lat, mdr);
633}
634
635MEpoch SDMemTable::getEpoch (Int whichRow) const
636{
637 MEpoch::Types met = getTimeReference();
638//
639 ROScalarColumn<Double> tme(table_, "TIME");
640 Double obstime;
641 tme.get(whichRow,obstime);
642 MVEpoch tm2(Quantum<Double>(obstime, Unit(String("d"))));
643 return MEpoch(tm2, met);
644}
645
646MPosition SDMemTable::getAntennaPosition () const
647{
648 Vector<Double> antpos;
649 table_.keywordSet().get("AntennaPosition", antpos);
650 MVPosition mvpos(antpos(0),antpos(1),antpos(2));
651 return MPosition(mvpos);
652}
653
654
655SpectralCoordinate SDMemTable::getSpectralCoordinate(uInt whichIdx) const
656{
657
658 Table t = table_.keywordSet().asTable("FREQUENCIES");
659 if (whichIdx > t.nrow() ) {
660 throw(AipsError("SDMemTable::getSpectralCoordinate - whichIdx out of range"));
661 }
662
663 Double rp,rv,inc;
664 String rf;
665 ROScalarColumn<Double> rpc(t, "REFPIX");
666 ROScalarColumn<Double> rvc(t, "REFVAL");
667 ROScalarColumn<Double> incc(t, "INCREMENT");
668 t.keywordSet().get("BASEREFFRAME",rf);
669
670// Create SpectralCoordinate (units Hz)
671
672 MFrequency::Types mft;
673 if (!MFrequency::getType(mft, rf)) {
674 cerr << "Frequency type unknown assuming TOPO" << endl;
675 mft = MFrequency::TOPO;
676 }
677 rpc.get(whichIdx, rp);
678 rvc.get(whichIdx, rv);
679 incc.get(whichIdx, inc);
680//
681 SpectralCoordinate spec(mft,rv,inc,rp);
682//
683 return spec;
684}
685
686
687SpectralCoordinate SDMemTable::getSpectralCoordinate(uInt whichIdx, uInt whichRow) const
688{
689// Create basic SC
690
691 SpectralCoordinate spec = getSpectralCoordinate (whichIdx);
692//
693 Table t = table_.keywordSet().asTable("FREQUENCIES");
694
695// Set rest frequencies
696
697 Vector<Double> vec;
698 t.keywordSet().get("RESTFREQS",vec);
699 if (vec.nelements() > 0) {
700 spec.setRestFrequencies(vec);
701
702// Select rest freq
703
704 if (vec.nelements() >= nIF()) {
705 spec.selectRestFrequency(uInt(IFSel_));
706 }
707 }
708
709// Set up frame conversion layer
710
711 String frm;
712 t.keywordSet().get("REFFRAME",frm);
713 if (frm == "") frm = "TOPO";
714 MFrequency::Types mtype;
715 if (!MFrequency::getType(mtype, frm)) {
716 cout << "Frequency type unknown assuming TOPO" << endl; // SHould never happen
717 mtype = MFrequency::TOPO;
718 }
719
720// Set reference frame conversion (requires row)
721
722 MDirection direct = getDirection(whichRow);
723 MEpoch epoch = getEpoch(whichRow);
724 MPosition pos = getAntennaPosition();
725 if (!spec.setReferenceConversion(mtype,epoch,pos,direct)) {
726 throw(AipsError("Couldn't convert frequency frame."));
727 }
728
729// Now velocity conversion if appropriate
730
731 String unitStr;
732 t.keywordSet().get("UNIT",unitStr);
733//
734 String dpl;
735 t.keywordSet().get("DOPPLER",dpl);
736 MDoppler::Types dtype;
737 MDoppler::getType(dtype, dpl);
738
739// Only set velocity unit if non-blank and non-Hz
740
741 if (!unitStr.empty()) {
742 Unit unitU(unitStr);
743 if (unitU==Unit("Hz")) {
744 } else {
745 spec.setVelocity(unitStr, dtype);
746 }
747 }
748//
749 return spec;
750}
751
752
753Bool SDMemTable::setCoordinate(const SpectralCoordinate& speccord,
754 uInt whichIdx) {
755 Table t = table_.rwKeywordSet().asTable("FREQUENCIES");
756 if (whichIdx > t.nrow() ) {
757 throw(AipsError("SDMemTable::setCoordinate - coord no out of range"));
758 }
759 ScalarColumn<Double> rpc(t, "REFPIX");
760 ScalarColumn<Double> rvc(t, "REFVAL");
761 ScalarColumn<Double> incc(t, "INCREMENT");
762
763 rpc.put(whichIdx, speccord.referencePixel()[0]);
764 rvc.put(whichIdx, speccord.referenceValue()[0]);
765 incc.put(whichIdx, speccord.increment()[0]);
766
767 return True;
768}
769
770Int SDMemTable::nCoordinates() const
771{
772 return table_.keywordSet().asTable("FREQUENCIES").nrow();
773}
774
775void SDMemTable::setRestFreqs(std::vector<double> freqs,
776 const std::string& theunit)
777{
778 Vector<Double> tvec(freqs);
779 Quantum<Vector<Double> > q(tvec, String(theunit));
780 tvec.resize();
781 tvec = q.getValue("Hz");
782 Table t = table_.keywordSet().asTable("FREQUENCIES");
783 t.rwKeywordSet().define("RESTFREQS",tvec);
784}
785
786std::vector<double> SDMemTable::getRestFreqs() const
787{
788 Table t = table_.keywordSet().asTable("FREQUENCIES");
789 Vector<Double> tvec;
790 t.keywordSet().get("RESTFREQS",tvec);
791 std::vector<double> stlout;
792 tvec.tovector(stlout);
793 return stlout;
794}
795
796bool SDMemTable::putSDFreqTable(const SDFrequencyTable& sdft)
797{
798 TableDesc td("", "1", TableDesc::Scratch);
799 td.addColumn(ScalarColumnDesc<Double>("REFPIX"));
800 td.addColumn(ScalarColumnDesc<Double>("REFVAL"));
801 td.addColumn(ScalarColumnDesc<Double>("INCREMENT"));
802 SetupNewTable aNewTab("freqs", td, Table::New);
803 Table aTable (aNewTab, Table::Memory, sdft.length());
804 ScalarColumn<Double> sc0(aTable, "REFPIX");
805 ScalarColumn<Double> sc1(aTable, "REFVAL");
806 ScalarColumn<Double> sc2(aTable, "INCREMENT");
807 for (uInt i=0; i < sdft.length(); ++i) {
808 sc0.put(i,sdft.referencePixel(i));
809 sc1.put(i,sdft.referenceValue(i));
810 sc2.put(i,sdft.increment(i));
811 }
812 String rf = sdft.refFrame();
813 if (rf.contains("TOPO")) rf = "TOPO";
814
815 aTable.rwKeywordSet().define("BASEREFFRAME", rf);
816 aTable.rwKeywordSet().define("REFFRAME", rf);
817 aTable.rwKeywordSet().define("EQUINOX", sdft.equinox());
818 aTable.rwKeywordSet().define("UNIT", String(""));
819 aTable.rwKeywordSet().define("DOPPLER", String("RADIO"));
820 Vector<Double> rfvec;
821 String rfunit;
822 sdft.restFrequencies(rfvec,rfunit);
823 Quantum<Vector<Double> > q(rfvec, rfunit);
824 rfvec.resize();
825 rfvec = q.getValue("Hz");
826 aTable.rwKeywordSet().define("RESTFREQS", rfvec);
827 table_.rwKeywordSet().defineTable ("FREQUENCIES", aTable);
828 return True;
829}
830
831SDFrequencyTable SDMemTable::getSDFreqTable() const
832{
833 const Table& t = table_.keywordSet().asTable("FREQUENCIES");
834 SDFrequencyTable sdft;
835
836// Add refpix/refval/incr. What are the units ? Hz I suppose
837// but it's nowhere described...
838
839 Vector<Double> refPix, refVal, incr;
840 ScalarColumn<Double> refPixCol(t, "REFPIX");
841 ScalarColumn<Double> refValCol(t, "REFVAL");
842 ScalarColumn<Double> incrCol(t, "INCREMENT");
843 refPix = refPixCol.getColumn();
844 refVal = refValCol.getColumn();
845 incr = incrCol.getColumn();
846//
847 uInt n = refPix.nelements();
848 for (uInt i=0; i<n; i++) {
849 sdft.addFrequency(refPix[i], refVal[i], incr[i]);
850 }
851
852// Frequency reference frame. I don't know if this
853// is the correct frame. It might be 'REFFRAME'
854// rather than 'BASEREFFRAME' ?
855
856 String baseFrame;
857 t.keywordSet().get("BASEREFFRAME",baseFrame);
858 sdft.setRefFrame(baseFrame);
859
860// Equinox
861
862 Float equinox;
863 t.keywordSet().get("EQUINOX", equinox);
864 sdft.setEquinox(equinox);
865
866// Rest Frequency
867
868 Vector<Double> restFreqs;
869 t.keywordSet().get("RESTFREQS", restFreqs);
870 for (uInt i=0; i<restFreqs.nelements(); i++) {
871 sdft.addRestFrequency(restFreqs[i]);
872 }
873 sdft.setRestFrequencyUnit(String("Hz"));
874//
875 return sdft;
876}
877
878bool SDMemTable::putSDContainer(const SDContainer& sdc)
879{
880 ScalarColumn<Double> mjd(table_, "TIME");
881 ScalarColumn<String> srcn(table_, "SRCNAME");
882 ScalarColumn<String> fldn(table_, "FIELDNAME");
883 ArrayColumn<Float> spec(table_, "SPECTRA");
884 ArrayColumn<uChar> flags(table_, "FLAGTRA");
885 ArrayColumn<Float> ts(table_, "TSYS");
886 ScalarColumn<Int> scan(table_, "SCANID");
887 ScalarColumn<Double> integr(table_, "INTERVAL");
888 ArrayColumn<uInt> freqid(table_, "FREQID");
889 ArrayColumn<Double> dir(table_, "DIRECTION");
890 ScalarColumn<Int> rbeam(table_, "REFBEAM");
891 ArrayColumn<Float> tcal(table_, "TCAL");
892 ScalarColumn<String> tcalt(table_, "TCALTIME");
893 ScalarColumn<Float> az(table_, "AZIMUTH");
894 ScalarColumn<Float> el(table_, "ELEVATION");
895 ScalarColumn<Float> para(table_, "PARANGLE");
896 ArrayColumn<String> hist(table_, "HISTORY");
897
898 uInt rno = table_.nrow();
899 table_.addRow();
900
901 mjd.put(rno, sdc.timestamp);
902 srcn.put(rno, sdc.sourcename);
903 fldn.put(rno, sdc.fieldname);
904 spec.put(rno, sdc.getSpectrum());
905 flags.put(rno, sdc.getFlags());
906 ts.put(rno, sdc.getTsys());
907 scan.put(rno, sdc.scanid);
908 integr.put(rno, sdc.interval);
909 freqid.put(rno, sdc.getFreqMap());
910 dir.put(rno, sdc.getDirection());
911 rbeam.put(rno, sdc.refbeam);
912 tcal.put(rno, sdc.tcal);
913 tcalt.put(rno, sdc.tcaltime);
914 az.put(rno, sdc.azimuth);
915 el.put(rno, sdc.elevation);
916 para.put(rno, sdc.parangle);
917 hist.put(rno, sdc.getHistory());
918
919 return true;
920}
921
922SDContainer SDMemTable::getSDContainer(uInt whichRow) const
923{
924 ROScalarColumn<Double> mjd(table_, "TIME");
925 ROScalarColumn<String> srcn(table_, "SRCNAME");
926 ROScalarColumn<String> fldn(table_, "FIELDNAME");
927 ROArrayColumn<Float> spec(table_, "SPECTRA");
928 ROArrayColumn<uChar> flags(table_, "FLAGTRA");
929 ROArrayColumn<Float> ts(table_, "TSYS");
930 ROScalarColumn<Int> scan(table_, "SCANID");
931 ROScalarColumn<Double> integr(table_, "INTERVAL");
932 ROArrayColumn<uInt> freqid(table_, "FREQID");
933 ROArrayColumn<Double> dir(table_, "DIRECTION");
934 ROScalarColumn<Int> rbeam(table_, "REFBEAM");
935 ROArrayColumn<Float> tcal(table_, "TCAL");
936 ROScalarColumn<String> tcalt(table_, "TCALTIME");
937 ROScalarColumn<Float> az(table_, "AZIMUTH");
938 ROScalarColumn<Float> el(table_, "ELEVATION");
939 ROScalarColumn<Float> para(table_, "PARANGLE");
940 ROArrayColumn<String> hist(table_, "HISTORY");
941
942 SDContainer sdc(nBeam(),nIF(),nPol(),nChan());
943 mjd.get(whichRow, sdc.timestamp);
944 srcn.get(whichRow, sdc.sourcename);
945 integr.get(whichRow, sdc.interval);
946 scan.get(whichRow, sdc.scanid);
947 fldn.get(whichRow, sdc.fieldname);
948 rbeam.get(whichRow, sdc.refbeam);
949 az.get(whichRow, sdc.azimuth);
950 el.get(whichRow, sdc.elevation);
951 para.get(whichRow, sdc.parangle);
952 Vector<Float> tc;
953 tcal.get(whichRow, tc);
954 sdc.tcal[0] = tc[0];sdc.tcal[1] = tc[1];
955 tcalt.get(whichRow, sdc.tcaltime);
956 Array<Float> spectrum;
957 Array<Float> tsys;
958 Array<uChar> flagtrum;
959 Vector<uInt> fmap;
960 Array<Double> direction;
961 Vector<String> histo;
962 spec.get(whichRow, spectrum);
963 sdc.putSpectrum(spectrum);
964 flags.get(whichRow, flagtrum);
965 sdc.putFlags(flagtrum);
966 ts.get(whichRow, tsys);
967 sdc.putTsys(tsys);
968 freqid.get(whichRow, fmap);
969 sdc.putFreqMap(fmap);
970 dir.get(whichRow, direction);
971 sdc.putDirection(direction);
972 hist.get(whichRow, histo);
973 sdc.putHistory(histo);
974 return sdc;
975}
976
977bool SDMemTable::putSDHeader(const SDHeader& sdh)
978{
979 table_.rwKeywordSet().define("nIF", sdh.nif);
980 table_.rwKeywordSet().define("nBeam", sdh.nbeam);
981 table_.rwKeywordSet().define("nPol", sdh.npol);
982 table_.rwKeywordSet().define("nChan", sdh.nchan);
983 table_.rwKeywordSet().define("Observer", sdh.observer);
984 table_.rwKeywordSet().define("Project", sdh.project);
985 table_.rwKeywordSet().define("Obstype", sdh.obstype);
986 table_.rwKeywordSet().define("AntennaName", sdh.antennaname);
987 table_.rwKeywordSet().define("AntennaPosition", sdh.antennaposition);
988 table_.rwKeywordSet().define("Equinox", sdh.equinox);
989 table_.rwKeywordSet().define("FreqRefFrame", sdh.freqref);
990 table_.rwKeywordSet().define("FreqRefVal", sdh.reffreq);
991 table_.rwKeywordSet().define("Bandwidth", sdh.bandwidth);
992 table_.rwKeywordSet().define("UTC", sdh.utc);
993 table_.rwKeywordSet().define("FluxUnit", sdh.fluxunit);
994 table_.rwKeywordSet().define("Epoch", sdh.epoch);
995 return true;
996}
997
998SDHeader SDMemTable::getSDHeader() const
999{
1000 SDHeader sdh;
1001 table_.keywordSet().get("nBeam",sdh.nbeam);
1002 table_.keywordSet().get("nIF",sdh.nif);
1003 table_.keywordSet().get("nPol",sdh.npol);
1004 table_.keywordSet().get("nChan",sdh.nchan);
1005 table_.keywordSet().get("Observer", sdh.observer);
1006 table_.keywordSet().get("Project", sdh.project);
1007 table_.keywordSet().get("Obstype", sdh.obstype);
1008 table_.keywordSet().get("AntennaName", sdh.antennaname);
1009 table_.keywordSet().get("AntennaPosition", sdh.antennaposition);
1010 table_.keywordSet().get("Equinox", sdh.equinox);
1011 table_.keywordSet().get("FreqRefFrame", sdh.freqref);
1012 table_.keywordSet().get("FreqRefVal", sdh.reffreq);
1013 table_.keywordSet().get("Bandwidth", sdh.bandwidth);
1014 table_.keywordSet().get("UTC", sdh.utc);
1015 table_.keywordSet().get("FluxUnit", sdh.fluxunit);
1016 table_.keywordSet().get("Epoch", sdh.epoch);
1017 return sdh;
1018}
1019void SDMemTable::makePersistent(const std::string& filename)
1020{
1021 table_.deepCopy(filename,Table::New);
1022}
1023
1024Int SDMemTable::nScan() const {
1025 Int n = 0;
1026 ROScalarColumn<Int> scans(table_, "SCANID");
1027 Int previous = -1;Int current=0;
1028 for (uInt i=0; i< scans.nrow();i++) {
1029 scans.getScalar(i,current);
1030 if (previous != current) {
1031 previous = current;
1032 n++;
1033 }
1034 }
1035 return n;
1036}
1037
1038String SDMemTable::formatSec(Double x) const
1039{
1040 Double xcop = x;
1041 MVTime mvt(xcop/24./3600.); // make days
1042
1043 if (x < 59.95)
1044 return String(" ") + mvt.string(MVTime::TIME_CLEAN_NO_HM, 7)+"s";
1045 else if (x < 3599.95)
1046 return String(" ") + mvt.string(MVTime::TIME_CLEAN_NO_H,7)+" ";
1047 else {
1048 ostringstream oss;
1049 oss << setw(2) << std::right << setprecision(1) << mvt.hour();
1050 oss << ":" << mvt.string(MVTime::TIME_CLEAN_NO_H,7) << " ";
1051 return String(oss);
1052 }
1053};
1054
1055String SDMemTable::formatDirection(const MDirection& md) const
1056{
1057 Vector<Double> t = md.getAngle(Unit(String("rad"))).getValue();
1058 Int prec = 7;
1059
1060 MVAngle mvLon(t[0]);
1061 String sLon = mvLon.string(MVAngle::TIME,prec);
1062 MVAngle mvLat(t[1]);
1063 String sLat = mvLat.string(MVAngle::ANGLE+MVAngle::DIG2,prec);
1064
1065 return sLon + String(" ") + sLat;
1066}
1067
1068
1069std::string SDMemTable::getFluxUnit() const
1070{
1071 String tmp;
1072 table_.keywordSet().get("FluxUnit", tmp);
1073 return tmp;
1074}
1075
1076void SDMemTable::setFluxUnit(const std::string& unit)
1077{
1078 String tmp(unit);
1079 Unit tU(tmp);
1080 if (tU==Unit("K") || tU==Unit("Jy")) {
1081 table_.rwKeywordSet().define(String("FluxUnit"), tmp);
1082 } else {
1083 throw AipsError("Illegal unit - must be compatible with Jy or K");
1084 }
1085}
1086
1087
1088void SDMemTable::setInstrument(const std::string& name)
1089{
1090 Bool throwIt = True;
1091 Instrument ins = convertInstrument (name, throwIt);
1092 String nameU(name);
1093 nameU.upcase();
1094 table_.rwKeywordSet().define(String("AntennaName"), nameU);
1095}
1096
1097std::string SDMemTable::summary() const {
1098 ROScalarColumn<Int> scans(table_, "SCANID");
1099 ROScalarColumn<String> srcs(table_, "SRCNAME");
1100
1101 // get number of integrations per scan
1102 int cIdx = 0;
1103 int idx = 0;
1104 int scount = 0;
1105 std::vector<int> cycles;
1106 for (uInt i=0; i<scans.nrow();++i) {
1107 while (idx == cIdx && i<scans.nrow()) {
1108 scans.getScalar(++i,cIdx);
1109 ++scount;
1110 }
1111 idx = cIdx;
1112 cycles.push_back(scount);
1113 scount=0;
1114 --i;
1115 }
1116
1117
1118 ostringstream oss;
1119 oss << endl;
1120 oss << "--------------------------------------------------" << endl;
1121 oss << " Scan Table Summary" << endl;
1122 oss << "--------------------------------------------------" << endl;
1123 oss.flags(std::ios_base::left);
1124 oss << setw(15) << "Beams:" << setw(4) << nBeam() << endl
1125 << setw(15) << "IFs:" << setw(4) << nIF() << endl
1126 << setw(15) << "Polarisations:" << setw(4) << nPol() << endl
1127 << setw(15) << "Channels:" << setw(4) << nChan() << endl;
1128 oss << endl;
1129 String tmp;
1130 table_.keywordSet().get("Observer", tmp);
1131 oss << setw(15) << "Observer:" << tmp << endl;
1132 oss << setw(15) << "Obs Date:" << getTime(-1,True) << endl;
1133 table_.keywordSet().get("Project", tmp);
1134 oss << setw(15) << "Project:" << tmp << endl;
1135 table_.keywordSet().get("Obstype", tmp);
1136 oss << setw(15) << "Obs. Type:" << tmp << endl;
1137 table_.keywordSet().get("AntennaName", tmp);
1138 oss << setw(15) << "Antenna Name:" << tmp << endl;
1139 table_.keywordSet().get("FluxUnit", tmp);
1140 oss << setw(15) << "Flux Unit:" << tmp << endl;
1141 Table t = table_.keywordSet().asTable("FREQUENCIES");
1142 Vector<Double> vec;
1143 t.keywordSet().get("RESTFREQS",vec);
1144 oss << setw(15) << "Rest Freqs:";
1145 if (vec.nelements() > 0) {
1146 oss << setprecision(0) << vec << " [Hz]" << endl;
1147 } else {
1148 oss << "None set" << endl;
1149 }
1150 oss << setw(15) << "Abcissa:" << getAbcissaString() << endl;
1151 oss << setw(15) << "Cursor:" << "Beam[" << getBeam() << "] "
1152 << "IF[" << getIF() << "] " << "Pol[" << getPol() << "]" << endl;
1153 oss << endl;
1154 uInt count = 0;
1155 String name;
1156 Int previous = -1;Int current=0;
1157 Int integ = 0;
1158 String dirtype ="Position ("+
1159 MDirection::showType(getDirectionReference())+
1160 ")";
1161 oss << setw(6) << "Scan"
1162 << setw(15) << "Source"
1163 << setw(26) << dirtype
1164 << setw(10) << "Time"
1165 << setw(13) << "Integration" << endl;
1166 oss << "-------------------------------------------------------------------------------" << endl;
1167
1168 std::vector<int>::iterator it = cycles.begin();
1169 for (uInt i=0; i< scans.nrow();i++) {
1170 scans.getScalar(i,current);
1171 if (previous != current) {
1172 srcs.getScalar(i,name);
1173 previous = current;
1174 String t = formatSec(Double(getInterval(i)));
1175 String posit = formatDirection(getDirection(i,True));
1176 oss << setw(6) << count
1177 << setw(15) << name
1178 << setw(26) << posit
1179 << setw(10) << getTime(i,False)
1180 << setw(3) << std::right << *it << " x "
1181 << setw(10)
1182 << t << std::left << endl;
1183 count++;
1184 it++;
1185 } else {
1186 integ++;
1187 }
1188 }
1189 oss << endl;
1190 oss << "Table contains " << table_.nrow() << " integration(s)." << endl;
1191 oss << "in " << count << " scan(s)." << endl;
1192 oss << "-------------------------------------------------------------------------------";
1193 return String(oss);
1194}
1195
1196Int SDMemTable::nBeam() const
1197{
1198 Int n;
1199 table_.keywordSet().get("nBeam",n);
1200 return n;
1201}
1202Int SDMemTable::nIF() const {
1203 Int n;
1204 table_.keywordSet().get("nIF",n);
1205 return n;
1206}
1207Int SDMemTable::nPol() const {
1208 Int n;
1209 table_.keywordSet().get("nPol",n);
1210 return n;
1211}
1212Int SDMemTable::nChan() const {
1213 Int n;
1214 table_.keywordSet().get("nChan",n);
1215 return n;
1216}
1217bool SDMemTable::appendHistory(const std::string& hist, int whichRow)
1218{
1219 ArrayColumn<String> histo(table_, "HISTORY");
1220 Vector<String> history;
1221 histo.get(whichRow, history);
1222 history.resize(history.nelements()+1,True);
1223 history[history.nelements()-1] = hist;
1224 histo.put(whichRow, history);
1225}
1226
1227std::vector<std::string> SDMemTable::history(int whichRow) const
1228{
1229 ROArrayColumn<String> hist(table_, "HISTORY");
1230 Vector<String> history;
1231 hist.get(whichRow, history);
1232 std::vector<std::string> stlout;
1233 // there is no Array<String>.tovector(std::vector<std::string>), so
1234 // do it by hand
1235 for (uInt i=0; i<history.nelements(); ++i) {
1236 stlout.push_back(history[i]);
1237 }
1238 return stlout;
1239}
1240/*
1241void SDMemTable::maskChannels(const std::vector<Int>& whichChans ) {
1242
1243 std::vector<int>::iterator it;
1244 ArrayAccessor<uChar, Axis<asap::PolAxis> > j(flags_);
1245 for (it = whichChans.begin(); it != whichChans.end(); it++) {
1246 j.reset(j.begin(uInt(*it)));
1247 for (ArrayAccessor<uChar, Axis<asap::BeamAxis> > i(j); i != i.end(); ++i) {
1248 for (ArrayAccessor<uChar, Axis<asap::IFAxis> > ii(i); ii != ii.end(); ++ii) {
1249 for (ArrayAccessor<uChar, Axis<asap::ChanAxis> > iii(ii);
1250 iii != iii.end(); ++iii) {
1251 (*iii) =
1252 }
1253 }
1254 }
1255 }
1256
1257}
1258*/
1259void SDMemTable::flag(int whichRow)
1260{
1261 ArrayColumn<uChar> spec(table_, "FLAGTRA");
1262 Array<uChar> arr;
1263 spec.get(whichRow, arr);
1264
1265 ArrayAccessor<uChar, Axis<asap::BeamAxis> > aa0(arr);
1266 aa0.reset(aa0.begin(uInt(beamSel_)));//go to beam
1267 ArrayAccessor<uChar, Axis<asap::IFAxis> > aa1(aa0);
1268 aa1.reset(aa1.begin(uInt(IFSel_)));// go to IF
1269 ArrayAccessor<uChar, Axis<asap::PolAxis> > aa2(aa1);
1270 aa2.reset(aa2.begin(uInt(polSel_)));// go to pol
1271
1272 for (ArrayAccessor<uChar, Axis<asap::ChanAxis> > i(aa2); i != i.end(); ++i) {
1273 (*i) = uChar(True);
1274 }
1275
1276 spec.put(whichRow, arr);
1277}
1278
1279MDirection::Types SDMemTable::getDirectionReference() const
1280{
1281 Float eq;
1282 table_.keywordSet().get("Equinox",eq);
1283 std::map<float,string> mp;
1284 mp[2000.0] = "J2000";
1285 mp[1950.0] = "B1950";
1286 MDirection::Types mdr;
1287 if (!MDirection::getType(mdr, mp[eq])) {
1288 mdr = MDirection::J2000;
1289 cerr << "Unknown equinox using J2000" << endl;
1290 }
1291//
1292 return mdr;
1293}
1294
1295MEpoch::Types SDMemTable::getTimeReference () const
1296{
1297 MEpoch::Types met;
1298 String ep;
1299 table_.keywordSet().get("Epoch",ep);
1300 if (!MEpoch::getType(met, ep)) {
1301 cerr << "Epoch type uknown - using UTC" << endl;
1302 met = MEpoch::UTC;
1303 }
1304//
1305 return met;
1306}
1307
1308
1309Instrument SDMemTable::convertInstrument (const String& instrument,
1310 Bool throwIt)
1311{
1312 String t(instrument);
1313 t.upcase();
1314
1315// The strings are what SDReader returns, after cunning interrogation
1316// of station names... :-(
1317
1318 Instrument inst = asap::UNKNOWN;
1319 if (t==String("DSS-43")) {
1320 inst = TIDBINBILLA;
1321 } else if (t==String("ATPKSMB")) {
1322 inst = ATPKSMB;
1323 } else if (t==String("ATPKSHOH")) {
1324 inst = ATPKSHOH;
1325 } else if (t==String("ATMOPRA")) {
1326 inst = ATMOPRA;
1327 } else if (t==String("CEDUNA")) {
1328 inst = CEDUNA;
1329 } else if (t==String("HOBART")) {
1330 inst = HOBART;
1331 } else {
1332 if (throwIt) {
1333 throw AipsError("Unrecognized instrument - use function scan.set_instrument to set");
1334 }
1335 }
1336 return inst;
1337}
1338
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