source: trunk/src/PlotHelper.cpp@ 2991

Last change on this file since 2991 was 2951, checked in by Kana Sugimoto, 10 years ago

New Development: No

JIRA Issue: Yes (CAS-5870)

Ready for Test: Yes

Interface Changes: No

What Interface Changed:

Test Programs: sdplot with plottype='grid' and polaverage=True

Put in Release Notes: No

Module(s): sdplot, PlotHelper

Description: Fixed a bug reported by Shinya. There was an issue in auto center and cell size resolution when scantable has only one pointing.


File size: 14.3 KB
RevLine 
[2689]1//
2// C++ Interface: PlotHelper
3//
4// Description:
5// A small helper class to handle direction coordinate in asapplotter
6//
7// Author: Kana Sugimoto <kana.sugi@nao.ac.jp>, (C) 2012
8//
9// Copyright: See COPYING file that comes with this distribution
10//
11//
12
13// casacore
14#include <casa/Arrays/Vector.h>
15#include <casa/Quanta/Quantum.h>
16#include <casa/Quanta/QuantumHolder.h>
[2719]17#include <casa/Quanta/MVAngle.h>
[2689]18#include <casa/Logging/LogIO.h>
19
[2717]20#include <measures/Measures/MDirection.h>
21#include <tables/Tables/TableRecord.h>
22
23
[2689]24#include "PlotHelper.h"
25
[2951]26#define SMALL_ANGLE 1.0e-7
[2689]27
[2951]28// #ifndef KS_DEBUG
29// #define KS_DEBUG
30// #endif
31
[2689]32using namespace std ;
33using namespace casa ;
34using namespace asap ;
35
36namespace asap {
37
[2719]38PlotHelper::PlotHelper() : dircoord_p(0)
[2689]39{
40#ifdef KS_DEBUG
[2717]41 cout << "Default constructor nrow = " << data_p->nrow() << endl;
[2689]42#endif
43};
44
[2719]45PlotHelper::PlotHelper( const ScantableWrapper &s) : dircoord_p(0)
[2689]46{
47#ifdef KS_DEBUG
48 cout << "Constructing PlotHelper with scantable wrapper" << endl;
49#endif
50 setScantable(s);
51};
52
53PlotHelper::~PlotHelper(){
54#ifdef KS_DEBUG
55 cout << "Called PlotHelper destructor" << endl;
56#endif
[2719]57 if (dircoord_p){
[2689]58#ifdef KS_DEBUG
[2719]59 cout << "Destructing dircoord_p" << endl;
[2689]60#endif
[2719]61 delete dircoord_p;
62 dircoord_p = 0;
[2689]63 }
64};
65
66void PlotHelper::setScantable( const ScantableWrapper &s )
67{
68#ifdef KS_DEBUG
69 cout << "Setting scantable" << endl;
70#endif
[2717]71 data_p = s.getCP();
[2689]72};
73
74
[2717]75DirectionCoordinate PlotHelper::getSTCoord(const int nx, const int ny,
76 const Projection::Type ptype)
77{
78 LogIO os(LogOrigin("PlotHelper","getSTCoord()", WHERE));
[2718]79 os << "Getting pointing information of the scantable." << LogIO::POST;
[2717]80 if (data_p->nrow() < 1)
81 throw AipsError("Scantable is not set. Please set a scantable first.");
[2689]82
[2717]83 // First, generate rough direction coordinate.
84 DirectionCoordinate coord;
85 Double incx, incy;
86 MDirection::Types mdt;
87 ROArrayColumn<Double> dircol;
88 Double xmax, xmin, ymax, ymin;
89 Double centx, centy;
90 Matrix<Double> xform(2,2);
91 xform = 0.0;
92 xform.diagonal() = 1.0;
93 // Rough estimates of center and cell from scantable DIRECTIONs.
94 dircol.attach( data_p->table(), "DIRECTION" );
95 const Vector<String> udir = dircol.keywordSet().asArrayString("QuantumUnits");
96 const Matrix<Double> direction = dircol.getColumn();
97 minMax(xmin, xmax, direction.row(0));
98 minMax(ymin, ymax, direction.row(1));
99 if (!MDirection::getType(mdt, data_p->getDirectionRefString()))
100 throw AipsError("Failed to get direction reference from scantable.");
101 centx = 0.5 * (xmin + xmax);
102 centy = 0.5 * (ymin + ymax);
103 incx = abs(xmax - xmin) / (double) nx * cos(centy);
104 incy = abs(ymax - ymin) / (double) ny;
[2951]105 // Direction coordinate seems not work well with inc=0. set very small value.
106 if (incx == 0.) incx = SMALL_ANGLE;
107 if (incy == 0.) incy = SMALL_ANGLE;
[2717]108 // Generate a temporal direction coordinte
109 coord = DirectionCoordinate(mdt, ptype,
110 centx, centy, incx, incy, xform,
111 0.5*Double(nx), 0.5*Double(ny));
112 coord.setWorldAxisUnits(udir);
113#ifdef KS_DEBUG
114 {//Debug outputs
[2718]115 cout << "Generated a temporal direction coordinate of a scantable: " << endl;
[2717]116 Vector<String> units = coord.worldAxisUnits();
117 Vector<Double> refv = coord.referenceValue();
118 cout <<"- Reference: " << MDirection::showType(coord.directionType()) << " " << refv[0] << units[0] << " " << refv[1] << units[1] << endl;
119 Vector<Double> refpix = coord.referencePixel();
120 cout <<"- Reference Pixel: [" << refpix[0] << ", " << refpix[1] << "]" << endl;
121 Vector<Double> inc = coord.increment();
122 cout <<"- Increments: [" << inc[0] << ", " << inc[1] << "]" << endl;
123 cout <<"- Projection: " << coord.projection().name() << endl;
124 }
125#endif
126 return coord;
127}
[2689]128
[2717]129void PlotHelper::setGridParam(const int nx, const int ny,
130 const string cellx, const string celly,
131 string center, const string projname)
132{
133 LogIO os(LogOrigin("PlotHelper","setGridParam()", WHERE));
[2689]134 // Value check of nx and ny
135 if (nx < 1)
136 throw(AipsError("nx should be > 0"));
137 if (ny < 1)
138 throw(AipsError("ny should be > 0"));
139 // Destroy old coord
[2719]140 if (dircoord_p){
[2689]141#ifdef KS_DEBUG
[2719]142 cout << "Destructing old dircoord_p" << endl;
[2689]143#endif
[2719]144 delete dircoord_p;
145 dircoord_p = 0;
[2689]146 }
147
[2717]148 // Check for availability of data_p
149 const bool stset = ((data_p->nrow() > 0) ? true : false);
150 const bool needst = center.empty() || (cellx.empty() && celly.empty());
151 if (needst && !stset)
152 throw AipsError("Could not resolve grid parameters. Please set a scantable first.");
153
154 // projection
155 Projection::Type projtype(Projection::type(String(projname)));
156
157 // Calculate projected map center (in world coordinate)
158 // and extent (in pixel coordinate) from scantable DIRECIONs (if necessary).
159 MDirection stcent;
160 Double stxmax, stxmin, stymax, stymin;
161 MDirection::Types stdt;
162 DirectionCoordinate stcoord;
163 Quantum<Double> stincx, stincy;
164 if (needst && stset) {
165 stcoord = getSTCoord(nx, ny, projtype);
166 Vector<Double> inc = stcoord.increment();
167 Vector<String> units = stcoord.worldAxisUnits();
168 stincx = Quantum<Double>(inc[0], units[0]);
169 stincy = Quantum<Double>(inc[1], units[0]);
170 stdt = stcoord.directionType();
171 // Get the extent of directions in Pixel coordinate
172 ROArrayColumn<Double> dircol;
173 dircol.attach( data_p->table(), "DIRECTION" );
174 const Matrix<Double> direction = dircol.getColumn();
175 Matrix<Double> dirpix;
176 Vector<Bool> failures;
177 if (!stcoord.toPixelMany(dirpix, direction, failures))
178 throw AipsError("Failed to get directions in pixel coordinate.");
179 minMax(stxmin, stxmax, dirpix.row(0));
180 minMax(stymin, stymax, dirpix.row(1));
181 // Get the direction center in World coordinate.
182 Vector<Double> centpix(2);
183 centpix[0] = 0.5 * (stxmin + stxmax);
184 centpix[1] = 0.5 * (stymin + stymax);
185 stcoord.toWorld(stcent, centpix);
186#ifdef KS_DEBUG
187 {//Debug output
188 Quantum< Vector<Double> > qcent;
189 cout << "Got the center and map extent of scantable." << endl;
190 qcent = stcent.getAngle();
191 cout << "- Center of DIRECTIONs: " << stcent.getRefString() << " "
192 << qcent.getValue()[0] << qcent.getUnit() << " "
193 << qcent.getValue()[1] << qcent.getUnit() << endl;
194 cout << "- Map extent: [" << (stxmax-stxmin)*stincx.getValue() << ", "
195 << (stymax-stymin)*stincy.getValue() << "] ( " << stincx.getUnit() << ")" << endl;
196 }
197#endif
198 }
199
[2718]200 os << "Setting grid parameters" << LogIO::POST;
[2717]201 // Now, define direction coordinate from input parameters (in radian)
202 Double incx, incy;
203 Double centx, centy;
204 MDirection::Types mdt;
205 // center
206 if (center.empty()){
[2718]207 os << "center is not specified. Using pointing center of the scantable." << LogIO::POST;
[2717]208 if (!stset)
209 throw AipsError("Scantable is not set. Could not resolve map center.");
[2718]210
[2717]211 centx = stcent.getAngle("rad").getValue()[0];
212 centy = stcent.getAngle("rad").getValue()[1];
213 mdt = stdt;
214 } else {
[2718]215 os << "Using user defined center" << LogIO::POST;
[2717]216 // Parse center string
217 string::size_type pos0 = center.find(" ");
218
219 if (pos0 == string::npos)
220 throw AipsError("bad string format in center direction");
221
222 string::size_type pos1 = center.find(" ", pos0+1);
223 String sepoch, sra, sdec;
224 if (pos1 != string::npos) {
225 sepoch = center.substr(0, pos0);
226 sra = center.substr(pos0+1, pos1-pos0);
227 sdec = center.substr(pos1+1);
228 } else {
229 sepoch = "J2000";
230 sra = center.substr(0, pos0);
231 sdec = center.substr(pos0+1);
232 }
233 if (!MDirection::getType(mdt,sepoch))
234 throw AipsError("Invalid direction reference in center");
[2719]235 if (stset){
236 if ( !needst &&
237 !MDirection::getType( stdt, data_p->getDirectionRefString() ) )
238 throw AipsError("Failed to get direction reference from scantable.");
239 if (mdt != stdt)
240 throw AipsError("Direction reference of center should be the same as input scantable");
241 }
[2717]242 QuantumHolder qh ;
243 String err ;
244 qh.fromString(err, sra);
245 Quantum<Double> ra = qh.asQuantumDouble();
246 qh.fromString(err, sdec) ;
247 Quantum<Double> dec = qh.asQuantumDouble();
248 centx = ra.getValue("rad");
249 centy = dec.getValue("rad");
250 // rotaion
251 if (stset) {
252 Double stcentx = stcent.getAngle("rad").getValue()[0];
253 Double rotnum = round( abs(centx - stcentx) / (C::_2pi) );
254 if (centx < stcentx) rotnum *= -1;
255 centx -= (rotnum * C::_2pi);
256 }
257 }
[2718]258 os << "Grid center: ( " << centx << " rad , " << centy << " rad ) " << LogIO::POST;
[2717]259
260 // cell
261 if (cellx.empty() && celly.empty()){
[2718]262 os << "cell size is not specified. Using cell size to cover all pointings in the scantable." << LogIO::POST;
[2717]263 if (!stset)
264 throw AipsError("Scantable is not set. Could not resolve cell size.");
[2718]265
[2717]266 Vector<Double> centpix;
267 MDirection centmd = MDirection(Quantum<Double>(centx, "rad"),
268 Quantum<Double>(centy, "rad"), mdt);
269 stcoord.toPixel(centpix, centmd);
270#ifdef KS_DEBUG
271 cout << "- got centpix [" << centpix[0] << ", " << centpix[1] << "]" <<endl;
272#endif
[2951]273 // Direction coordinate seems not work well with inc=0. set very small value.
274 Double wx = max( max( abs(stxmax-centpix[0]), abs(stxmin-centpix[0]) ), 0.5 )
[2717]275 * 2 * stincx.getValue("rad");
[2951]276 Double wy = max( max( abs(stymax-centpix[1]), abs(stymin-centpix[1]) ), 0.5 )
[2717]277 * 2 * stincy.getValue("rad");
278 incx = wx / max(nx - 1., 1.);
279 incy = wy / max(ny - 1., 1.);
280 } else {
[2718]281 os << "Using user defined cell size" << LogIO::POST;
[2717]282 Quantum<Double> qcellx, qcelly;
283 if (!cellx.empty() && !celly.empty()){
284 readQuantity(qcellx, String(cellx));
285 readQuantity(qcelly, String(celly));
286 } else if (celly.empty()) {
287 readQuantity(qcellx, String(cellx));
288 qcelly = qcellx;
289 } else { //only celly is defined
290 readQuantity(qcelly, String(celly));
291 qcellx = qcelly;
292 }
293 incx = qcellx.getValue("rad");
294 incy = qcelly.getValue("rad");
295 }
[2718]296 // inc should be negative to transpose plot
297 incx = -abs(incx);
298 incy = -abs(incy);
[2717]299
[2718]300 os << "Spacing: ( " << abs(incx) << " rad , " << abs(incy) << " rad )" <<endl;
301
[2719]302 setupCoord(mdt, projtype, centx, centy, incx, incy,
303 0.5*Double(nx), 0.5*Double(ny)) ; // pixel at center)
304
[2717]305};
306
307void PlotHelper::setGridParamVal(const int nx, const int ny,
308 const double cellx, const double celly,
309 const double centx, const double centy,
310 const string epoch, const string projname){
[2718]311 LogIO os(LogOrigin("PlotHelper","setGridParamVal()", WHERE));
[2717]312 // Value check of nx and ny
313 if (nx < 1)
314 throw(AipsError("nx should be > 0"));
315 if (ny < 1)
316 throw(AipsError("ny should be > 0"));
317 // Destroy old coord
[2719]318 if (dircoord_p){
[2717]319#ifdef KS_DEBUG
[2719]320 cout << "Destructing old dircoord_p" << endl;
[2717]321#endif
[2719]322 delete dircoord_p;
323 dircoord_p = 0;
[2717]324 }
325
[2689]326 // center (in rad)
327 Double centX(centx), centY(centy);
328 // cell size (in rad)
329 Double incX(cellx), incY(celly);
330 // epoch
331 MDirection::Types mdt;
332 MDirection::getType(mdt, String(epoch));
333 // projection
334 Projection::Type projType(Projection::type(String(projname)));
335
[2719]336 setupCoord(mdt, projType, centX, centY, incX, incY,
337 0.5*Double(nx), 0.5*Double(ny)) ; // pixel at center
338// 0.5*Double(nx-1), 0.5*Double(ny-1)) ; // pixel at grid
339
340};
341
342
343void PlotHelper::setupCoord(const MDirection::Types mdt,
344 const Projection::Type pjt,
345 const Double centx, const Double centy,
346 const Double incx, const Double incy,
347 const Double refx, const Double refy)
348{
349 LogIO os(LogOrigin("PlotHelper","setupCoord()", WHERE));
350 // Destroy old coord
351 if (dircoord_p){
352#ifdef KS_DEBUG
353 cout << "Destructing old dircoord_p" << endl;
354#endif
355 delete dircoord_p;
356 dircoord_p = 0;
357 }
358
[2689]359 Matrix<Double> xform(2,2) ;
360 xform = 0.0 ;
361 xform.diagonal() = 1.0 ;
[2719]362 dircoord_p = new DirectionCoordinate(mdt, pjt, centx, centy, incx, incy,
363 xform, refx, refy);
[2718]364 {//Summary
365 os << "Successfully generated grid coordinate:" << LogIO::POST;
[2719]366 Vector<String> units = dircoord_p->worldAxisUnits();
367 Vector<Double> refv = dircoord_p->referenceValue();
368 os <<"- Reference Direction : "
369 << MDirection::showType(dircoord_p->directionType())
370 << " " << refv[0] << units[0] << " " << refv[1] << units[1] << LogIO::POST;
371 Vector<Double> refpix = dircoord_p->referencePixel();
[2718]372 os <<"- Reference Pixel : [" << refpix[0] << ", " << refpix[1] << "]" << LogIO::POST;
[2719]373 Vector<Double> inc = dircoord_p->increment();
[2718]374 os <<"- Increments : [" << inc[0] << ", " << inc[1] << "]" << LogIO::POST;
[2719]375 os <<"- Projection Type : " << dircoord_p->projection().name() << LogIO::POST;
[2689]376 }
377};
378
[2719]379vector<double> PlotHelper::getGridPixel(const int whichrow)
380{
[2717]381 if (data_p->nrow() < 1)
[2689]382 throw AipsError("Scantable is not set. Could not get direction.");
[2717]383 else if (whichrow > int(data_p->nrow()) - 1)
[2689]384 throw AipsError("Row index out of range.");
[2719]385 if (!dircoord_p)
[2689]386 throw AipsError("Direction coordinate is not defined.");
387
388 Vector<Double> pixel;
389 MDirection world;
390 vector<double> outvec;
[2717]391 world = data_p->getDirection(whichrow);
[2689]392#ifdef KS_DEBUG
[2717]393 cout << "searching pixel position (world = " << data_p->getDirectionString(whichrow) << " = [" << world.getAngle("rad").getValue()[0] << ", " << world.getAngle("rad").getValue()[1] << "])" << endl;
[2689]394#endif
[2719]395 dircoord_p->toPixel(pixel, world);
[2689]396#ifdef KS_DEBUG
397 cout << "got pixel = [" << pixel[0] << ", " << pixel[1] << "]" << endl;
398#endif
399 // convert pixel to std vector
400 pixel.tovector(outvec);
401 return outvec;
402};
403
[2719]404string PlotHelper::getGridRef()
405{
406 if (!dircoord_p)
407 throw AipsError("Direction coordinate is not defined. Please set it first.");
408
409 string outref;
410
411 Vector<String> units = dircoord_p->worldAxisUnits();
412 Vector<Double> refv = dircoord_p->referenceValue();
413 MVAngle lon( Quantum<Double>(refv[0], units[0]) );
414 MVAngle lat ( Quantum<Double>(refv[1], units[1]) );
415 outref = MDirection::showType(dircoord_p->directionType()) + " "
416 + lon(0.0).string(MVAngle::TIME, 9) + " "
417 + lat.string(MVAngle::ANGLE+MVAngle::DIG2, 9);
418
419 return outref;
420};
421
422vector<double> PlotHelper::getGridCellVal()
423{
424 if (!dircoord_p)
425 throw AipsError("Direction coordinate is not defined. Please set it first.");
426
427 vector<double> outinc(2);
428 Vector<Double> inc = dircoord_p->increment();
429 Vector<String> units = dircoord_p->worldAxisUnits();
430 MVAngle qincx( Quantum<Double>(inc[0], units[0]) );
431 MVAngle qincy( Quantum<Double>(inc[1], units[1]) );
432 outinc[0] = (double) abs(qincx.radian());
433 outinc[1] = (double) abs(qincy.radian());
434
435 return outinc;
436};
437
438
[2689]439} //namespace asap
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