[1974] | 1 | //
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| 2 | // C++ Interface: MSWriter
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| 3 | //
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| 4 | // Description:
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| 5 | //
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| 6 | // This class is specific writer for MS format
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| 7 | //
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| 8 | // Takeshi Nakazato <takeshi.nakazato@nao.ac.jp>, (C) 2010
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| 9 | //
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| 10 | // Copyright: See COPYING file that comes with this distribution
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| 11 | //
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| 12 | //
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| 13 |
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| 14 | #include <casa/OS/File.h>
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| 15 | #include <casa/OS/RegularFile.h>
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| 16 | #include <casa/OS/Directory.h>
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| 17 | #include <casa/OS/SymLink.h>
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| 18 | #include <casa/BasicSL/String.h>
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| 19 |
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| 20 | #include <tables/Tables/TableDesc.h>
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| 21 | #include <tables/Tables/SetupNewTab.h>
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| 22 | #include <tables/Tables/TableIter.h>
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| 23 | #include <tables/Tables/RefRows.h>
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| 24 |
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| 25 | #include <ms/MeasurementSets/MeasurementSet.h>
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| 26 | #include <ms/MeasurementSets/MSColumns.h>
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| 27 | #include <ms/MeasurementSets/MSPolIndex.h>
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| 28 | #include <ms/MeasurementSets/MSDataDescIndex.h>
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| 29 |
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| 30 | #include "MSWriter.h"
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| 31 | #include "STHeader.h"
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| 32 | #include "STFrequencies.h"
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| 33 |
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| 34 | using namespace casa ;
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| 35 |
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| 36 | namespace asap
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| 37 | {
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| 38 |
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| 39 | MSWriter::MSWriter(CountedPtr<Scantable> stable)
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| 40 | : table_(stable)
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| 41 | {
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| 42 | os_ = LogIO() ;
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| 43 | os_.origin( LogOrigin( "MSWriter", "MSWriter()", WHERE ) ) ;
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| 44 | os_ << "MSWriter::MSWriter()" << LogIO::POST ;
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| 45 |
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| 46 | // initialize writer
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| 47 | init() ;
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| 48 | }
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| 49 |
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| 50 | MSWriter::~MSWriter()
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| 51 | {
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| 52 | os_.origin( LogOrigin( "MSWriter", "~MSWriter()", WHERE ) ) ;
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| 53 | os_ << "MSWriter::~MSWriter()" << LogIO::POST ;
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| 54 | }
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| 55 |
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| 56 | bool MSWriter::write(const string& filename, const Record& rec)
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| 57 | {
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| 58 | os_.origin( LogOrigin( "MSWriter", "write()", WHERE ) ) ;
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| 59 | os_ << "MSWriter::write()" << LogIO::POST ;
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| 60 |
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| 61 | filename_ = filename ;
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| 62 |
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| 63 | // parsing MS options
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| 64 | Bool overwrite = False ;
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| 65 | if ( rec.isDefined( "ms" ) ) {
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| 66 | Record msrec = rec.asRecord( "ms" ) ;
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| 67 | if ( msrec.isDefined( "overwrite" ) ) {
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| 68 | overwrite = msrec.asBool( "overwrite" ) ;
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| 69 | }
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| 70 | }
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| 71 |
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| 72 | os_ << "Parsing MS options" << endl ;
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| 73 | os_ << " overwrite = " << overwrite << LogIO::POST ;
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| 74 |
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| 75 | File file( filename_ ) ;
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| 76 | if ( file.exists() ) {
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| 77 | if ( overwrite ) {
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| 78 | os_ << filename_ << " exists. Overwrite existing data... " << LogIO::POST ;
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| 79 | if ( file.isRegular() ) RegularFile(file).remove() ;
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| 80 | else if ( file.isDirectory() ) Directory(file).removeRecursive() ;
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| 81 | else SymLink(file).remove() ;
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| 82 | }
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| 83 | else {
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| 84 | os_ << LogIO::SEVERE << "ERROR: " << filename_ << " exists..." << LogIO::POST ;
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| 85 | return False ;
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| 86 | }
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| 87 | }
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| 88 |
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| 89 | // set up MS
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| 90 | setupMS() ;
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| 91 |
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| 92 | // subtables
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| 93 | // OBSERVATION
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| 94 | fillObservation() ;
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| 95 |
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| 96 | // ANTENNA
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| 97 | fillAntenna() ;
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| 98 |
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| 99 | // MAIN
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| 100 | // Iterate over several ids
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| 101 | Vector<uInt> processedFreqId( 0 ) ;
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| 102 | Int defaultFieldId = 0 ;
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| 103 | //
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| 104 | // ITERATION: FIELDNAME
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| 105 | //
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| 106 | Int added0 = 0 ;
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| 107 | Int current0 = mstable_->nrow() ;
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| 108 | TableIterator iter0( table_->table(), "FIELDNAME" ) ;
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| 109 | while( !iter0.pastEnd() ) {
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| 110 | Table t0( iter0.table() ) ;
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| 111 | ROScalarColumn<String> fieldNameCol( t0, "FIELDNAME" ) ;
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| 112 | String fieldName = fieldNameCol(0) ;
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| 113 | String::size_type pos = fieldName.find( "__" ) ;
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| 114 | Int fieldId = -1 ;
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| 115 | if ( pos != String::npos ) {
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| 116 | os_ << "fieldName.substr( pos+2 )=" << fieldName.substr( pos+2 ) << LogIO::POST ;
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| 117 | fieldId = String::toInt( fieldName.substr( pos+2 ) ) ;
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| 118 | fieldName = fieldName.substr( 0, pos ) ;
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| 119 | }
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| 120 | else {
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| 121 | os_ << "use default field id" << LogIO::POST ;
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| 122 | fieldId = defaultFieldId ;
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| 123 | defaultFieldId++ ;
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| 124 | }
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| 125 | os_ << "fieldId" << fieldId << ": " << fieldName << LogIO::POST ;
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| 126 | //
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| 127 | // ITERATION: BEAMNO
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| 128 | //
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| 129 | Int added1 = 0 ;
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| 130 | Int current1 = mstable_->nrow() ;
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| 131 | TableIterator iter1( t0, "BEAMNO" ) ;
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| 132 | while( !iter1.pastEnd() ) {
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| 133 | Table t1( iter1.table() ) ;
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| 134 | ROScalarColumn<uInt> beamNoCol( t1, "BEAMNO" ) ;
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| 135 | uInt beamNo = beamNoCol(0) ;
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| 136 | os_ << "beamNo = " << beamNo << LogIO::POST ;
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| 137 | //
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| 138 | // ITERATION: SCANNO
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| 139 | //
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| 140 | Int added2 = 0 ;
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| 141 | Int current2 = mstable_->nrow() ;
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| 142 | TableIterator iter2( t1, "SCANNO" ) ;
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| 143 | while( !iter2.pastEnd() ) {
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| 144 | Table t2( iter2.table() ) ;
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| 145 | ROScalarColumn<uInt> scanNoCol( t2, "SCANNO" ) ;
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| 146 | uInt scanNo = scanNoCol(0) ;
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| 147 | os_ << "scanNo = " << scanNo << LogIO::POST ;
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| 148 | //
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| 149 | // ITERATION: CYCLENO
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| 150 | //
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| 151 | Int added3 = 0 ;
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| 152 | Int current3 = mstable_->nrow() ;
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| 153 | TableIterator iter3( t2, "CYCLENO" ) ;
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| 154 | while( !iter3.pastEnd() ) {
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| 155 | Table t3( iter3.table() ) ;
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| 156 | //
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| 157 | // ITERATION: IFNO
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| 158 | //
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| 159 | Int added4 = 0 ;
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| 160 | Int current4 = mstable_->nrow() ;
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| 161 | TableIterator iter4( t3, "IFNO" ) ;
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| 162 | while( !iter4.pastEnd() ) {
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| 163 | Table t4( iter4.table() ) ;
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| 164 | ROScalarColumn<uInt> ifNoCol( t4, "IFNO" ) ;
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| 165 | uInt ifNo = ifNoCol(0) ;
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| 166 | os_ << "ifNo = " << ifNo << LogIO::POST ;
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| 167 | ROScalarColumn<uInt> freqIdCol( t4, "FREQ_ID" ) ;
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| 168 | uInt freqId = freqIdCol(0) ;
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| 169 | os_ << "freqId = " << freqId << LogIO::POST ;
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| 170 | //
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| 171 | // ITERATION: TIME
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| 172 | //
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| 173 | Int added5 = 0 ;
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| 174 | Int current5 = mstable_->nrow() ;
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| 175 | TableIterator iter5( t4, "TIME" ) ;
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| 176 | while( !iter5.pastEnd() ) {
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| 177 | Table t5( iter5.table().sort("POLNO") ) ;
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| 178 | Int prevnr = mstable_->nrow() ;
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| 179 | Int nrow = t5.nrow() ;
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| 180 | os_ << "nrow = " << nrow << LogIO::POST ;
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| 181 |
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| 182 | // add row
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| 183 | mstable_->addRow( 1, True ) ;
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| 184 |
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| 185 | Vector<Int> polnos( nrow ) ;
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| 186 | indgen( polnos, 0 ) ;
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| 187 | Int polid = addPolarization( polnos ) ;
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| 188 | os_ << "polid = " << polid << LogIO::POST ;
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| 189 | //
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| 190 | // LOOP: POLNO
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| 191 | //
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| 192 | for ( Int ipol = 0 ; ipol < nrow ; ipol++ ) {
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| 193 | }
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| 194 |
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| 195 | // TIME and TIME_CENTROID
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| 196 | ROScalarMeasColumn<MEpoch> timeCol( t5, "TIME" ) ;
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| 197 | ScalarMeasColumn<MEpoch> msTimeCol( *mstable_, "TIME" ) ;
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| 198 | msTimeCol.put( prevnr, timeCol(0) ) ;
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| 199 | msTimeCol.attach( *mstable_, "TIME_CENTROID" ) ;
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| 200 | msTimeCol.put( prevnr, timeCol(0) ) ;
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| 201 |
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| 202 | // INTERVAL and EXPOSURE
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| 203 | ROScalarColumn<Double> intervalCol( t5, "INTERVAL" ) ;
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| 204 | ScalarColumn<Double> msIntervalCol( *mstable_, "INTERVAL" ) ;
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| 205 | msIntervalCol.put( prevnr, intervalCol(0) ) ;
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| 206 | msIntervalCol.attach( *mstable_, "EXPOSURE" ) ;
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| 207 | msIntervalCol.put( prevnr, intervalCol(0) ) ;
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| 208 |
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| 209 | // add DATA_DESCRIPTION row
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| 210 | Int ddid = addDataDescription( polid, ifNo ) ;
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| 211 | os_ << "ddid = " << ddid << LogIO::POST ;
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| 212 | ScalarColumn<Int> ddIdCol( *mstable_, "DATA_DESC_ID" ) ;
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| 213 | ddIdCol.put( prevnr, ddid ) ;
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| 214 |
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| 215 | added5 += 1 ;
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| 216 | os_ << "added5 = " << added5 << " current5 = " << current5 << LogIO::POST ;
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| 217 | iter5.next() ;
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| 218 | }
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| 219 |
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| 220 | // add SPECTRAL_WINDOW row
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| 221 | if ( allNE( processedFreqId, freqId ) ) {
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| 222 | uInt vsize = processedFreqId.size() ;
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| 223 | processedFreqId.resize( vsize+1, True ) ;
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| 224 | processedFreqId[vsize] = freqId ;
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| 225 | addSpectralWindow( ifNo, freqId ) ;
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| 226 | }
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| 227 |
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| 228 | added4 += added5 ;
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| 229 | os_ << "added4 = " << added4 << " current4 = " << current4 << LogIO::POST ;
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| 230 | iter4.next() ;
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| 231 | }
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| 232 | added3 += added4 ;
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| 233 | os_ << "added3 = " << added3 << " current3 = " << current3 << LogIO::POST ;
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| 234 | iter3.next() ;
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| 235 | }
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| 236 |
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| 237 | // SCAN_NUMBER
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| 238 | RefRows rows3( current3, current3+added3-1 ) ;
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| 239 | Vector<Int> scanNum( added3, scanNo ) ;
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| 240 | ScalarColumn<Int> scanNumCol( *mstable_, "SCAN_NUMBER" ) ;
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| 241 | scanNumCol.putColumnCells( rows3, scanNum ) ;
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| 242 |
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| 243 | added2 += added3 ;
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| 244 | os_ << "added2 = " << added2 << " current2 = " << current2 << LogIO::POST ;
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| 245 | iter2.next() ;
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| 246 | }
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| 247 |
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| 248 | // FEED1 and FEED2
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| 249 | RefRows rows2( current2, current2+added2-1 ) ;
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| 250 | Vector<Int> feedId( added2, beamNo ) ;
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| 251 | ScalarColumn<Int> feedCol( *mstable_, "FEED1" ) ;
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| 252 | feedCol.putColumnCells( rows2, feedId ) ;
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| 253 | feedCol.attach( *mstable_, "FEED2" ) ;
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| 254 | feedCol.putColumnCells( rows2, feedId ) ;
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| 255 |
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| 256 | // add FEED row
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| 257 | addFeed( beamNo ) ;
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| 258 |
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| 259 | added1 += added2 ;
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| 260 | os_ << "added1 = " << added1 << " current1 = " << current1 << LogIO::POST ;
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| 261 | iter1.next() ;
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| 262 | }
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| 263 |
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| 264 | // FIELD_ID
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| 265 | RefRows rows1( current1, current1+added1-1 ) ;
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| 266 | Vector<Int> fieldIds( added1, fieldId ) ;
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| 267 | ScalarColumn<Int> fieldIdCol( *mstable_, "FIELD_ID" ) ;
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| 268 | fieldIdCol.putColumnCells( rows1, fieldIds ) ;
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| 269 |
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| 270 | added0 += added1 ;
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| 271 | os_ << "added0 = " << added0 << " current0 = " << current0 << LogIO::POST ;
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| 272 | iter0.next() ;
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| 273 | }
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| 274 |
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| 275 | // OBSERVATION_ID is always 0
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| 276 | ScalarColumn<Int> sharedIntCol( *mstable_, "OBSERVATION_ID" ) ;
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| 277 | Vector<Int> sharedIntArr( added0, 0 ) ;
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| 278 | sharedIntCol.putColumn( sharedIntArr ) ;
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| 279 |
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| 280 | // ANTENNA1 and ANTENNA2 are always 0
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| 281 | sharedIntArr = 0 ;
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| 282 | sharedIntCol.attach( *mstable_, "ANTENNA1" ) ;
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| 283 | sharedIntCol.putColumn( sharedIntArr ) ;
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| 284 | sharedIntCol.attach( *mstable_, "ANTENNA2" ) ;
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| 285 | sharedIntCol.putColumn( sharedIntArr ) ;
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| 286 |
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| 287 | // ARRAY_ID is tentatively set to 0
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| 288 | sharedIntArr = 0 ;
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| 289 | sharedIntCol.attach( *mstable_, "ARRAY_ID" ) ;
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| 290 | sharedIntCol.putColumn( sharedIntArr ) ;
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| 291 |
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| 292 | return True ;
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| 293 | }
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| 294 |
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| 295 | void MSWriter::init()
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| 296 | {
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| 297 | // os_.origin( LogOrigin( "MSWriter", "init()", WHERE ) ) ;
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| 298 | os_ << "MSWriter::init()" << LogIO::POST ;
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| 299 |
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| 300 | // access to scantable
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| 301 | header_ = table_->getHeader() ;
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| 302 |
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| 303 | // FLOAT_DATA? or DATA?
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| 304 | if ( header_.npol > 2 ) {
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| 305 | isFloatData_ = False ;
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| 306 | isData_ = True ;
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| 307 | }
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| 308 | else {
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| 309 | isFloatData_ = True ;
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| 310 | isData_ = False ;
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| 311 | }
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| 312 |
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| 313 | // polarization type
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| 314 | polType_ = header_.poltype ;
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| 315 | if ( polType_ == "" )
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| 316 | polType_ = "stokes" ;
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| 317 | else if ( polType_.find( "linear" ) != String::npos )
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| 318 | polType_ = "linear" ;
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| 319 | else if ( polType_.find( "circular" ) != String::npos )
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| 320 | polType_ = "circular" ;
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| 321 | else if ( polType_.find( "stokes" ) != String::npos )
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| 322 | polType_ = "stokes" ;
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| 323 | else if ( polType_.find( "linpol" ) != String::npos )
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| 324 | polType_ = "linpol" ;
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| 325 | else
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| 326 | polType_ = "notype" ;
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| 327 |
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| 328 | }
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| 329 |
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| 330 | void MSWriter::setupMS()
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| 331 | {
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| 332 | // os_.origin( LogOrigin( "MSWriter", "setupMS()", WHERE ) ) ;
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| 333 | os_ << "MSWriter::setupMS()" << LogIO::POST ;
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| 334 |
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| 335 | TableDesc msDesc = MeasurementSet::requiredTableDesc() ;
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| 336 |
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| 337 | // any additional columns?
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| 338 | // TODO: add FLOAT_DATA column if npol == 2 otherwise add DATA column
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| 339 |
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| 340 | SetupNewTable newtab( filename_, msDesc, Table::New ) ;
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| 341 |
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| 342 | mstable_ = new MeasurementSet( newtab ) ;
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| 343 |
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| 344 | // create subtables
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| 345 | TableDesc antennaDesc = MSAntenna::requiredTableDesc() ;
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| 346 | SetupNewTable antennaTab( mstable_->antennaTableName(), antennaDesc, Table::New ) ;
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| 347 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::ANTENNA ), Table( antennaTab ) ) ;
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| 348 |
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| 349 | TableDesc dataDescDesc = MSDataDescription::requiredTableDesc() ;
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| 350 | SetupNewTable dataDescTab( mstable_->dataDescriptionTableName(), dataDescDesc, Table::New ) ;
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| 351 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::DATA_DESCRIPTION ), Table( dataDescTab ) ) ;
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| 352 |
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| 353 | TableDesc dopplerDesc = MSDoppler::requiredTableDesc() ;
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| 354 | SetupNewTable dopplerTab( mstable_->dopplerTableName(), dopplerDesc, Table::New ) ;
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| 355 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::DOPPLER ), Table( dopplerTab ) ) ;
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| 356 |
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| 357 | TableDesc feedDesc = MSFeed::requiredTableDesc() ;
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| 358 | SetupNewTable feedTab( mstable_->feedTableName(), feedDesc, Table::New ) ;
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| 359 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::FEED ), Table( feedTab ) ) ;
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| 360 |
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| 361 | TableDesc fieldDesc = MSField::requiredTableDesc() ;
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| 362 | SetupNewTable fieldTab( mstable_->fieldTableName(), fieldDesc, Table::New ) ;
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| 363 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::FIELD ), Table( fieldTab ) ) ;
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| 364 |
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| 365 | TableDesc flagCmdDesc = MSFlagCmd::requiredTableDesc() ;
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| 366 | SetupNewTable flagCmdTab( mstable_->flagCmdTableName(), flagCmdDesc, Table::New ) ;
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| 367 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::FLAG_CMD ), Table( flagCmdTab ) ) ;
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| 368 |
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| 369 | TableDesc freqOffsetDesc = MSFreqOffset::requiredTableDesc() ;
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| 370 | SetupNewTable freqOffsetTab( mstable_->freqOffsetTableName(), freqOffsetDesc, Table::New ) ;
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| 371 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::FREQ_OFFSET ), Table( freqOffsetTab ) ) ;
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| 372 |
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| 373 | TableDesc historyDesc = MSHistory::requiredTableDesc() ;
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| 374 | SetupNewTable historyTab( mstable_->historyTableName(), historyDesc, Table::New ) ;
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| 375 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::HISTORY ), Table( historyTab ) ) ;
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| 376 |
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| 377 | TableDesc observationDesc = MSObservation::requiredTableDesc() ;
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| 378 | SetupNewTable observationTab( mstable_->observationTableName(), observationDesc, Table::New ) ;
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| 379 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::OBSERVATION ), Table( observationTab ) ) ;
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| 380 |
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| 381 | TableDesc pointingDesc = MSPointing::requiredTableDesc() ;
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| 382 | SetupNewTable pointingTab( mstable_->pointingTableName(), pointingDesc, Table::New ) ;
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| 383 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::POINTING ), Table( pointingTab ) ) ;
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| 384 |
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| 385 | TableDesc polarizationDesc = MSPolarization::requiredTableDesc() ;
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| 386 | SetupNewTable polarizationTab( mstable_->polarizationTableName(), polarizationDesc, Table::New ) ;
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| 387 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::POLARIZATION ), Table( polarizationTab ) ) ;
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| 388 |
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| 389 | TableDesc processorDesc = MSProcessor::requiredTableDesc() ;
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| 390 | SetupNewTable processorTab( mstable_->processorTableName(), processorDesc, Table::New ) ;
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| 391 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::PROCESSOR ), Table( processorTab ) ) ;
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| 392 |
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| 393 | TableDesc sourceDesc = MSSource::requiredTableDesc() ;
|
---|
| 394 | SetupNewTable sourceTab( mstable_->sourceTableName(), sourceDesc, Table::New ) ;
|
---|
| 395 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::SOURCE ), Table( sourceTab ) ) ;
|
---|
| 396 |
|
---|
| 397 | TableDesc spwDesc = MSSpectralWindow::requiredTableDesc() ;
|
---|
| 398 | SetupNewTable spwTab( mstable_->spectralWindowTableName(), spwDesc, Table::New ) ;
|
---|
| 399 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::SPECTRAL_WINDOW ), Table( spwTab ) ) ;
|
---|
| 400 |
|
---|
| 401 | TableDesc stateDesc = MSState::requiredTableDesc() ;
|
---|
| 402 | SetupNewTable stateTab( mstable_->stateTableName(), stateDesc, Table::New ) ;
|
---|
| 403 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::STATE ), Table( stateTab ) ) ;
|
---|
| 404 |
|
---|
| 405 | // TODO: add TCAL_SPECTRUM and TSYS_SPECTRUM if necessary
|
---|
| 406 | TableDesc sysCalDesc = MSSysCal::requiredTableDesc() ;
|
---|
| 407 | SetupNewTable sysCalTab( mstable_->sysCalTableName(), sysCalDesc, Table::New ) ;
|
---|
| 408 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::SYSCAL ), Table( sysCalTab ) ) ;
|
---|
| 409 |
|
---|
| 410 | TableDesc weatherDesc = MSWeather::requiredTableDesc() ;
|
---|
| 411 | SetupNewTable weatherTab( mstable_->weatherTableName(), weatherDesc, Table::New ) ;
|
---|
| 412 | mstable_->rwKeywordSet().defineTable( MeasurementSet::keywordName( MeasurementSet::WEATHER ), Table( weatherTab ) ) ;
|
---|
| 413 |
|
---|
| 414 | mstable_->initRefs() ;
|
---|
| 415 |
|
---|
| 416 | }
|
---|
| 417 |
|
---|
| 418 | void MSWriter::fillObservation()
|
---|
| 419 | {
|
---|
| 420 | os_ << "set up OBSERVATION subtable" << LogIO::POST ;
|
---|
| 421 | // only 1 row
|
---|
| 422 | mstable_->observation().addRow( 1, True ) ;
|
---|
| 423 | MSObservationColumns msObsCols( mstable_->observation() ) ;
|
---|
| 424 | msObsCols.observer().put( 0, header_.observer ) ;
|
---|
| 425 | // tentatively put antennaname (from ANTENNA subtable)
|
---|
| 426 | String hAntennaName = header_.antennaname ;
|
---|
| 427 | String::size_type pos = hAntennaName.find( "//" ) ;
|
---|
| 428 | String telescopeName ;
|
---|
| 429 | if ( pos != String::npos ) {
|
---|
| 430 | telescopeName = hAntennaName.substr( 0, pos ) ;
|
---|
| 431 | }
|
---|
| 432 | else {
|
---|
| 433 | pos = hAntennaName.find( "@" ) ;
|
---|
| 434 | telescopeName = hAntennaName.substr( 0, pos ) ;
|
---|
| 435 | }
|
---|
| 436 | os_ << "telescopeName = " << telescopeName << LogIO::POST ;
|
---|
| 437 | msObsCols.telescopeName().put( 0, telescopeName ) ;
|
---|
| 438 | msObsCols.project().put( 0, header_.project ) ;
|
---|
| 439 | //ScalarMeasColumn<MEpoch> timeCol( table_->table().sort("TIME"), "TIME" ) ;
|
---|
| 440 | Table sortedtable = table_->table().sort("TIME") ;
|
---|
| 441 | ScalarMeasColumn<MEpoch> timeCol( sortedtable, "TIME" ) ;
|
---|
| 442 | Vector<MEpoch> trange( 2 ) ;
|
---|
| 443 | trange[0] = timeCol( 0 ) ;
|
---|
| 444 | trange[1] = timeCol( table_->nrow()-1 ) ;
|
---|
| 445 | msObsCols.timeRangeMeas().put( 0, trange ) ;
|
---|
| 446 | }
|
---|
| 447 |
|
---|
| 448 | void MSWriter::fillAntenna()
|
---|
| 449 | {
|
---|
| 450 | os_ << "set up ANTENNA subtable" << LogIO::POST ;
|
---|
| 451 | // only 1 row
|
---|
| 452 | mstable_->antenna().addRow( 1, True ) ;
|
---|
| 453 | MSAntennaColumns msAntCols( mstable_->antenna() ) ;
|
---|
| 454 |
|
---|
| 455 | String hAntennaName = header_.antennaname ;
|
---|
| 456 | String::size_type pos = hAntennaName.find( "//" ) ;
|
---|
| 457 | String antennaName ;
|
---|
| 458 | String stationName ;
|
---|
| 459 | if ( pos != String::npos ) {
|
---|
| 460 | hAntennaName = hAntennaName.substr( pos+2 ) ;
|
---|
| 461 | }
|
---|
| 462 | pos = hAntennaName.find( "@" ) ;
|
---|
| 463 | if ( pos != String::npos ) {
|
---|
| 464 | antennaName = hAntennaName.substr( 0, pos ) ;
|
---|
| 465 | stationName = hAntennaName.substr( pos+1 ) ;
|
---|
| 466 | }
|
---|
| 467 | else {
|
---|
| 468 | antennaName = hAntennaName ;
|
---|
| 469 | stationName = hAntennaName ;
|
---|
| 470 | }
|
---|
| 471 | os_ << "antennaName = " << antennaName << LogIO::POST ;
|
---|
| 472 | os_ << "stationName = " << stationName << LogIO::POST ;
|
---|
| 473 |
|
---|
| 474 | msAntCols.name().put( 0, antennaName ) ;
|
---|
| 475 | msAntCols.station().put( 0, stationName ) ;
|
---|
| 476 |
|
---|
| 477 | os_ << "antennaPosition = " << header_.antennaposition << LogIO::POST ;
|
---|
| 478 |
|
---|
| 479 | msAntCols.position().put( 0, header_.antennaposition ) ;
|
---|
| 480 | }
|
---|
| 481 |
|
---|
| 482 | void MSWriter::addFeed( Int id )
|
---|
| 483 | {
|
---|
| 484 | os_ << "set up FEED subtable" << LogIO::POST ;
|
---|
| 485 |
|
---|
| 486 | // add row
|
---|
| 487 | MSFeed msFeed = mstable_->feed() ;
|
---|
| 488 | msFeed.addRow( 1, True ) ;
|
---|
| 489 | Int nrow = msFeed.nrow() ;
|
---|
| 490 |
|
---|
| 491 | MSFeedColumns msFeedCols( mstable_->feed() ) ;
|
---|
| 492 |
|
---|
| 493 | msFeedCols.feedId().put( nrow-1, id ) ;
|
---|
| 494 | msFeedCols.antennaId().put( nrow-1, 0 ) ;
|
---|
| 495 | }
|
---|
| 496 |
|
---|
| 497 | void MSWriter::addSpectralWindow( Int spwid, Int freqid )
|
---|
| 498 | {
|
---|
| 499 | os_ << "set up SPECTRAL_WINDOW subtable" << LogIO::POST ;
|
---|
| 500 |
|
---|
| 501 | // add row
|
---|
| 502 | MSSpectralWindow msSpw = mstable_->spectralWindow() ;
|
---|
| 503 | while( (Int)msSpw.nrow() <= spwid ) {
|
---|
| 504 | msSpw.addRow( 1, True ) ;
|
---|
| 505 | }
|
---|
| 506 |
|
---|
| 507 | MSSpWindowColumns msSpwCols( msSpw ) ;
|
---|
| 508 |
|
---|
| 509 | STFrequencies stf = table_->frequencies() ;
|
---|
| 510 |
|
---|
| 511 | // MEAS_FREQ_REF
|
---|
| 512 | msSpwCols.measFreqRef().put( spwid, stf.getFrame( True ) ) ;
|
---|
| 513 |
|
---|
| 514 | Double refpix ;
|
---|
| 515 | Double refval ;
|
---|
| 516 | Double inc ;
|
---|
| 517 | stf.getEntry( refpix, refval, inc, (uInt)freqid ) ;
|
---|
| 518 |
|
---|
| 519 | // NUM_CHAN
|
---|
| 520 | Int nchan = refpix * 2 ;
|
---|
| 521 | msSpwCols.numChan().put( spwid, nchan ) ;
|
---|
| 522 |
|
---|
| 523 | // TOTAL_BANDWIDTH
|
---|
| 524 | Double bw = nchan * inc ;
|
---|
| 525 | msSpwCols.totalBandwidth().put( spwid, bw ) ;
|
---|
| 526 |
|
---|
| 527 | // REF_FREQUENCY
|
---|
| 528 | Double refFreq = refval - refpix * inc ;
|
---|
| 529 | msSpwCols.refFrequency().put( spwid, refFreq ) ;
|
---|
| 530 |
|
---|
| 531 | // NET_SIDEBAND
|
---|
| 532 | // tentative: USB->0, LSB->1
|
---|
| 533 | Int netSideband = 0 ;
|
---|
| 534 | if ( inc < 0 )
|
---|
| 535 | netSideband = 1 ;
|
---|
| 536 | msSpwCols.netSideband().put( spwid, netSideband ) ;
|
---|
| 537 |
|
---|
| 538 | // RESOLUTION, CHAN_WIDTH, EFFECTIVE_BW
|
---|
| 539 | Vector<Double> sharedDoubleArr( nchan, inc ) ;
|
---|
| 540 | msSpwCols.resolution().put( spwid, sharedDoubleArr ) ;
|
---|
| 541 | msSpwCols.chanWidth().put( spwid, sharedDoubleArr ) ;
|
---|
| 542 | msSpwCols.effectiveBW().put( spwid, sharedDoubleArr ) ;
|
---|
| 543 |
|
---|
| 544 | // CHAN_FREQ
|
---|
| 545 | indgen( sharedDoubleArr, refFreq, inc ) ;
|
---|
| 546 | msSpwCols.chanFreq().put( spwid, sharedDoubleArr ) ;
|
---|
| 547 | }
|
---|
| 548 |
|
---|
| 549 | Int MSWriter::addPolarization( Vector<Int> polnos )
|
---|
| 550 | {
|
---|
| 551 | os_ << "set up SPECTRAL_WINDOW subtable" << LogIO::POST ;
|
---|
| 552 |
|
---|
| 553 | os_ << "polnos = " << polnos << LogIO::POST ;
|
---|
| 554 | MSPolarization msPol = mstable_->polarization() ;
|
---|
| 555 | uInt nrow = msPol.nrow() ;
|
---|
| 556 |
|
---|
| 557 | Vector<Int> corrType = toCorrType( polnos ) ;
|
---|
| 558 | os_ << "corrType = " << corrType << LogIO::POST ;
|
---|
| 559 |
|
---|
| 560 | MSPolarizationIndex msPolIdx( msPol ) ;
|
---|
| 561 | Vector<Int> polids = msPolIdx.matchCorrType( corrType ) ;
|
---|
| 562 | os_ << "polids = " << polids << LogIO::POST ;
|
---|
| 563 |
|
---|
| 564 | Int polid = -1 ;
|
---|
| 565 |
|
---|
| 566 | if ( polids.size() == 0 ) {
|
---|
| 567 | // add row
|
---|
| 568 | msPol.addRow( 1, True ) ;
|
---|
| 569 | polid = (Int)nrow ;
|
---|
| 570 |
|
---|
| 571 | MSPolarizationColumns msPolCols( msPol ) ;
|
---|
| 572 |
|
---|
| 573 | // CORR_TYPE
|
---|
| 574 | msPolCols.corrType().put( nrow, corrType ) ;
|
---|
| 575 |
|
---|
| 576 | // NUM_CORR
|
---|
| 577 | uInt npol = corrType.size() ;
|
---|
| 578 | msPolCols.numCorr().put( nrow, npol ) ;
|
---|
| 579 |
|
---|
| 580 | // CORR_PRODUCT
|
---|
| 581 | Matrix<Int> corrProd( 2, npol, -1 ) ;
|
---|
| 582 | if ( npol == 1 ) {
|
---|
| 583 | corrProd = 0 ;
|
---|
| 584 | }
|
---|
| 585 | else if ( npol == 2 ) {
|
---|
| 586 | corrProd.column(0) = 0 ;
|
---|
| 587 | corrProd.column(1) = 1 ;
|
---|
| 588 | }
|
---|
| 589 | else {
|
---|
| 590 | corrProd.column(0) = 0 ;
|
---|
| 591 | corrProd.column(3) = 1 ;
|
---|
| 592 | corrProd(0,1) = 0 ;
|
---|
| 593 | corrProd(1,1) = 1 ;
|
---|
| 594 | corrProd(0,2) = 1 ;
|
---|
| 595 | corrProd(1,2) = 0 ;
|
---|
| 596 | }
|
---|
| 597 | msPolCols.corrProduct().put( nrow, corrProd ) ;
|
---|
| 598 |
|
---|
| 599 | }
|
---|
| 600 | else {
|
---|
| 601 | polid = polids[0] ;
|
---|
| 602 | }
|
---|
| 603 |
|
---|
| 604 | return polid ;
|
---|
| 605 | }
|
---|
| 606 |
|
---|
| 607 | Vector<Int> MSWriter::toCorrType( Vector<Int> polnos )
|
---|
| 608 | {
|
---|
| 609 | uInt npol = polnos.size() ;
|
---|
| 610 | Vector<Int> corrType( npol, Stokes::Undefined ) ;
|
---|
| 611 |
|
---|
| 612 | if ( npol == 4 ) {
|
---|
| 613 | if ( polType_ == "linear" ) {
|
---|
| 614 | for ( uInt ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 615 | if ( polnos[ipol] == 0 )
|
---|
| 616 | corrType[ipol] = Stokes::XX ;
|
---|
| 617 | else if ( polnos[ipol] == 1 )
|
---|
| 618 | corrType[ipol] = Stokes::XY ;
|
---|
| 619 | else if ( polnos[ipol] == 2 )
|
---|
| 620 | corrType[ipol] = Stokes::YX ;
|
---|
| 621 | else if ( polnos[ipol] == 3 )
|
---|
| 622 | corrType[ipol] = Stokes::YY ;
|
---|
| 623 | }
|
---|
| 624 | }
|
---|
| 625 | else if ( polType_ == "circular" ) {
|
---|
| 626 | for ( uInt ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 627 | if ( polnos[ipol] == 0 )
|
---|
| 628 | corrType[ipol] = Stokes::RR ;
|
---|
| 629 | else if ( polnos[ipol] == 1 )
|
---|
| 630 | corrType[ipol] = Stokes::RL ;
|
---|
| 631 | else if ( polnos[ipol] == 2 )
|
---|
| 632 | corrType[ipol] = Stokes::LR ;
|
---|
| 633 | else if ( polnos[ipol] == 3 )
|
---|
| 634 | corrType[ipol] = Stokes::LL ;
|
---|
| 635 | }
|
---|
| 636 | }
|
---|
| 637 | else if ( polType_ == "stokes" ) {
|
---|
| 638 | for ( uInt ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 639 | if ( polnos[ipol] == 0 )
|
---|
| 640 | corrType[ipol] = Stokes::I ;
|
---|
| 641 | else if ( polnos[ipol] == 1 )
|
---|
| 642 | corrType[ipol] = Stokes::Q ;
|
---|
| 643 | else if ( polnos[ipol] == 2 )
|
---|
| 644 | corrType[ipol] = Stokes::U ;
|
---|
| 645 | else if ( polnos[ipol] == 3 )
|
---|
| 646 | corrType[ipol] = Stokes::V ;
|
---|
| 647 | }
|
---|
| 648 | }
|
---|
| 649 | }
|
---|
| 650 | else if ( npol == 2 ) {
|
---|
| 651 | if ( polType_ == "linear" ) {
|
---|
| 652 | for ( uInt ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 653 | if ( polnos[ipol] == 0 )
|
---|
| 654 | corrType[ipol] = Stokes::XX ;
|
---|
| 655 | else if ( polnos[ipol] == 1 )
|
---|
| 656 | corrType[ipol] = Stokes::YY ;
|
---|
| 657 | }
|
---|
| 658 | }
|
---|
| 659 | else if ( polType_ == "circular" ) {
|
---|
| 660 | for ( uInt ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 661 | if ( polnos[ipol] == 0 )
|
---|
| 662 | corrType[ipol] = Stokes::RR ;
|
---|
| 663 | else if ( polnos[ipol] == 1 )
|
---|
| 664 | corrType[ipol] = Stokes::LL ;
|
---|
| 665 | }
|
---|
| 666 | }
|
---|
| 667 | else if ( polType_ == "stokes" ) {
|
---|
| 668 | for ( uInt ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 669 | if ( polnos[ipol] == 0 )
|
---|
| 670 | corrType[ipol] = Stokes::I ;
|
---|
| 671 | else if ( polnos[ipol] == 1 )
|
---|
| 672 | corrType[ipol] = Stokes::V ;
|
---|
| 673 | }
|
---|
| 674 | }
|
---|
| 675 | else if ( polType_ == "linpol" ) {
|
---|
| 676 | for ( uInt ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 677 | if ( polnos[ipol] == 1 )
|
---|
| 678 | corrType[ipol] = Stokes::Plinear ;
|
---|
| 679 | else if ( polnos[ipol] == 2 )
|
---|
| 680 | corrType[ipol] = Stokes::Pangle ;
|
---|
| 681 | }
|
---|
| 682 | }
|
---|
| 683 | }
|
---|
| 684 | else if ( npol == 1 ) {
|
---|
| 685 | if ( polType_ == "linear" )
|
---|
| 686 | corrType[0] = Stokes::XX ;
|
---|
| 687 | else if ( polType_ == "circular" )
|
---|
| 688 | corrType[0] = Stokes::RR ;
|
---|
| 689 | else if ( polType_ == "stokes" )
|
---|
| 690 | corrType[0] = Stokes::I ;
|
---|
| 691 | }
|
---|
| 692 |
|
---|
| 693 | return corrType ;
|
---|
| 694 | }
|
---|
| 695 |
|
---|
| 696 | Int MSWriter::addDataDescription( Int polid, Int spwid )
|
---|
| 697 | {
|
---|
| 698 | os_ << "set up SPECTRAL_WINDOW subtable" << LogIO::POST ;
|
---|
| 699 |
|
---|
| 700 | MSDataDescription msDataDesc = mstable_->dataDescription() ;
|
---|
| 701 | uInt nrow = msDataDesc.nrow() ;
|
---|
| 702 |
|
---|
| 703 | MSDataDescIndex msDataDescIdx( msDataDesc ) ;
|
---|
| 704 |
|
---|
| 705 | Vector<Int> ddids = msDataDescIdx.matchSpwIdAndPolznId( spwid, polid ) ;
|
---|
| 706 | os_ << "ddids = " << ddids << LogIO::POST ;
|
---|
| 707 |
|
---|
| 708 | Int ddid = -1 ;
|
---|
| 709 | if ( ddids.size() == 0 ) {
|
---|
| 710 | msDataDesc.addRow( 1, True ) ;
|
---|
| 711 | MSDataDescColumns msDataDescCols( msDataDesc ) ;
|
---|
| 712 | msDataDescCols.polarizationId().put( nrow, polid ) ;
|
---|
| 713 | msDataDescCols.spectralWindowId().put( nrow, spwid ) ;
|
---|
| 714 | ddid = (Int)nrow ;
|
---|
| 715 | }
|
---|
| 716 | else {
|
---|
| 717 | ddid = ddids[0] ;
|
---|
| 718 | }
|
---|
| 719 |
|
---|
| 720 | return ddid ;
|
---|
| 721 | }
|
---|
| 722 | }
|
---|