[1974] | 1 | //
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| 2 | // C++ Interface: MSFiller
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| 3 | //
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| 4 | // Description:
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| 5 | //
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| 6 | // This class is specific filler for MS format
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| 7 | //
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| 8 | // Takeshi Nakazato <takeshi.nakazato@nao.ac.jp>, (C) 2010
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| 9 | //
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| 10 | // Copyright: See COPYING file that comes with this distribution
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| 11 | //
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| 12 | //
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| 13 |
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| 14 | #include <iostream>
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| 15 | #include <map>
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| 16 |
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| 17 | #include <tables/Tables/ExprNode.h>
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| 18 | #include <tables/Tables/TableIter.h>
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| 19 | #include <tables/Tables/ScalarColumn.h>
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| 20 | #include <tables/Tables/ArrayColumn.h>
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| 21 | #include <tables/Tables/RefRows.h>
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| 22 |
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| 23 | #include <casa/Containers/Block.h>
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| 24 | #include <casa/Logging/LogIO.h>
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| 25 | #include <casa/Arrays/Slicer.h>
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| 26 | #include <casa/Quanta/MVTime.h>
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| 27 |
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| 28 | #include <measures/Measures/Stokes.h>
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| 29 | #include <measures/Measures/MEpoch.h>
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| 30 | #include <measures/TableMeasures/ScalarMeasColumn.h>
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| 31 |
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| 32 | #include <atnf/PKSIO/SrcType.h>
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| 33 |
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| 34 | #include "MSFiller.h"
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| 35 | #include "STHeader.h"
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| 36 |
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| 37 | using namespace casa ;
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| 38 | using namespace std ;
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| 39 |
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| 40 | namespace asap {
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| 41 | MSFiller::MSFiller( casa::CountedPtr<Scantable> stable )
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| 42 | : table_( stable ),
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| 43 | antenna_( -1 ),
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| 44 | getPt_( False ),
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| 45 | isFloatData_( False ),
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| 46 | isData_( False ),
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| 47 | isDoppler_( False ),
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| 48 | isFlagCmd_( False ),
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| 49 | isFreqOffset_( False ),
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| 50 | isHistory_( False ),
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| 51 | isProcessor_( False ),
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| 52 | isSysCal_( False ),
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| 53 | isWeather_( False )
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| 54 | {
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| 55 | os_ = LogIO() ;
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| 56 | os_.origin( LogOrigin( "MSFiller", "MSFiller()", WHERE ) ) ;
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| 57 | }
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| 58 |
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| 59 | MSFiller::~MSFiller()
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| 60 | {
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| 61 | os_.origin( LogOrigin( "MSFiller", "~MSFiller()", WHERE ) ) ;
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| 62 | }
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| 63 |
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| 64 | bool MSFiller::open( const std::string &filename, const casa::Record &rec )
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| 65 | {
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| 66 | os_.origin( LogOrigin( "MSFiller", "open()", WHERE ) ) ;
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| 67 | //os_ << " filename = " << filename << endl ;
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| 68 | //rec.print( os_.output(), 25, " " ) ;
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| 69 | //os_ << LogIO::POST ;
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| 70 |
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| 71 | // parsing MS options
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| 72 | //Int antenna = 0 ;
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| 73 | //Bool getPt = False;
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| 74 |
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| 75 | if ( rec.isDefined( "ms" ) ) {
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| 76 | Record msrec = rec.asRecord( "ms" ) ;
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| 77 | if ( msrec.isDefined( "getpt" ) ) {
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| 78 | getPt_ = msrec.asBool( "getpt" ) ;
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| 79 | }
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| 80 | if ( msrec.isDefined( "antenna" ) ) {
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| 81 | if ( msrec.type( msrec.fieldNumber( "antenna" ) ) == TpInt ) {
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| 82 | antenna_ = msrec.asInt( "antenna" ) ;
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| 83 | }
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| 84 | else {
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| 85 | antenna_ = atoi( msrec.asString( "antenna" ).c_str() ) ;
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| 86 | }
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| 87 | }
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| 88 | else {
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| 89 | antenna_ = 0 ;
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| 90 | }
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| 91 | }
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| 92 |
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| 93 | os_ << "Parsing MS options" << endl ;
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| 94 | os_ << " getPt = " << getPt_ << endl ;
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| 95 | os_ << " antenna = " << antenna_ << LogIO::POST ;
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| 96 |
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| 97 | mstable_ = MeasurementSet( filename, Table::Old ) ;
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| 98 |
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| 99 | // check which data column exists
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| 100 | isFloatData_ = mstable_.isColumn( MSMainEnums::FLOAT_DATA ) ;
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| 101 | isData_ = mstable_.isColumn( MSMainEnums::DATA ) ;
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| 102 |
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| 103 | return true ;
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| 104 | }
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| 105 |
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| 106 | void MSFiller::fill()
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| 107 | {
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| 108 | os_.origin( LogOrigin( "MSFiller", "fill()", WHERE ) ) ;
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| 109 |
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| 110 | tablesel_ = mstable_( mstable_.col("ANTENNA1") == mstable_.col("ANTENNA2")
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| 111 | && mstable_.col("ANTENNA1") == antenna_ ) ;
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| 112 |
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| 113 | // Initialize header
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| 114 | STHeader sdh ;
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| 115 | sdh.nchan = 0 ;
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| 116 | sdh.npol = 0 ;
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| 117 | sdh.nif = 0 ;
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| 118 | sdh.nbeam = 0 ;
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| 119 | sdh.observer = "" ;
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| 120 | sdh.project = "" ;
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| 121 | sdh.obstype = "" ;
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| 122 | sdh.antennaname = "" ;
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| 123 | sdh.antennaposition.resize( 0 ) ;
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| 124 | sdh.equinox = 0.0 ;
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| 125 | sdh.freqref = "" ;
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| 126 | sdh.reffreq = -1.0 ;
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| 127 | sdh.bandwidth = 0.0 ;
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| 128 | sdh.utc = 0.0 ;
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| 129 | sdh.fluxunit = "" ;
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| 130 | sdh.epoch = "" ;
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| 131 | sdh.poltype = "" ;
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| 132 |
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| 133 | // check if optional table exists
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| 134 | const TableRecord msrec = tablesel_.keywordSet() ;
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| 135 | isDoppler_ = msrec.isDefined( "DOPPLER" ) ;
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| 136 | isFlagCmd_ = msrec.isDefined( "FLAG_CMD" ) ;
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| 137 | isFreqOffset_ = msrec.isDefined( "FREQ_OFFSET" ) ;
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| 138 | isHistory_ = msrec.isDefined( "HISTORY" ) ;
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| 139 | isProcessor_ = msrec.isDefined( "PROCESSOR" ) ;
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| 140 | isSysCal_ = msrec.isDefined( "SYSCAL" ) ;
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| 141 | isWeather_ = msrec.isDefined( "WEATHER" ) ;
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| 142 |
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| 143 | // Access to MS subtables
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| 144 | MSField fieldtab = tablesel_.field() ;
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| 145 | MSPolarization poltab = tablesel_.polarization() ;
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| 146 | MSDataDescription ddtab = tablesel_.dataDescription() ;
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| 147 | MSObservation obstab = tablesel_.observation() ;
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| 148 | MSSource srctab = tablesel_.source() ;
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| 149 | MSSpectralWindow spwtab = tablesel_.spectralWindow() ;
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| 150 | MSSysCal caltab = tablesel_.sysCal() ;
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| 151 | if ( caltab.nrow() == 0 )
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| 152 | isSysCal_ = False ;
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| 153 | MSPointing pointtab = tablesel_.pointing() ;
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| 154 | MSWeather weathertab = tablesel_.weather() ;
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| 155 | if ( weathertab.nrow() == 0 )
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| 156 | isWeather_ = False ;
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| 157 |
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| 158 | // os_ << "isDoppler_ = " << isDoppler_ << endl
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| 159 | // << "isFlagCmd_ = " << isFlagCmd_ << endl
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| 160 | // << "isFreqOffset_ = " << isFreqOffset_ << endl
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| 161 | // << "isHistory_ = " << isHistory_ << endl
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| 162 | // << "isProcessor_ = " << isProcessor_ << endl
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| 163 | // << "isSysCal_ = " << isSysCal_ << endl
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| 164 | // << "isWeather_ = " << isWeather_ << LogIO::POST ;
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| 165 |
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| 166 | // SUBTABLES: FREQUENCIES
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| 167 | //fillFrequencies() ;
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| 168 | table_->frequencies().setFrame( "LSRK" ) ;
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| 169 | table_->frequencies().setFrame( "LSRK", True ) ;
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| 170 |
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| 171 | // SUBTABLES: WEATHER
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| 172 | if ( isWeather_ )
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| 173 | fillWeather() ;
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| 174 |
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| 175 | // SUBTABLES: FOCUS
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| 176 | fillFocus() ;
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| 177 |
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| 178 | // SUBTABLES: TCAL
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| 179 | if ( isSysCal_ )
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| 180 | fillTcal() ;
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| 181 |
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| 182 | // SUBTABLES: MOLECULES
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| 183 | //fillMolecules() ;
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| 184 |
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| 185 | // SUBTABLES: FIT
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| 186 | //fillFit() ;
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| 187 |
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| 188 | // SUBTABLES: HISTORY
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| 189 | //fillHistory() ;
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| 190 |
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| 191 | // MAIN
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| 192 | // Iterate over several ids
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| 193 | Int oldnr = table_->nrow() ;
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| 194 | map<Int, uInt> ifmap ; // (IFNO, FREQ_ID) pair
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| 195 | ROMSAntennaColumns antCols( mstable_.antenna() ) ;
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| 196 | Vector< Quantum<Double> > antpos = antCols.positionQuant()(antenna_) ;
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| 197 | MPosition mp( MVPosition( antpos ), MPosition::ITRF ) ;
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| 198 | MSPointing potabsel = pointtab( pointtab.col("ANTENNA_ID")==antenna_ ).sort("TIME") ;
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| 199 | String stationName = antCols.station()(antenna_) ;
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| 200 | ROMSPointingColumns pointCols( potabsel ) ;
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| 201 | String telescopeName ;
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[1978] | 202 | //
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| 203 | // ITERATION: OBSERVATION_ID
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| 204 | //
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| 205 | Int added0 = 0 ;
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| 206 | Int current0 = table_->nrow() ;
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| 207 | TableIterator iter0( tablesel_, "OBSERVATION_ID" ) ;
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[1974] | 208 | while( !iter0.pastEnd() ) {
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| 209 | MeasurementSet t0( iter0.table() ) ;
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| 210 | ROScalarColumn<Int> mObsIdCol( t0, "OBSERVATION_ID" ) ;
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| 211 | Int obsId = mObsIdCol( 0 ) ;
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| 212 | ROMSObservationColumns obsCols( obstab ) ;
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| 213 | if ( sdh.observer == "" ) sdh.observer = obsCols.observer()(obsId) ;
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| 214 | if ( sdh.project == "" ) sdh.project = obsCols.project()(obsId) ;
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| 215 | MEpoch me = obsCols.timeRangeMeas()(obsId)(IPosition(1,0)) ;
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| 216 | if ( sdh.utc == 0.0 ) {
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| 217 | Quantum<Double> startTime = obsCols.timeRangeQuant()(obsId)(IPosition(1,0)) ;
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| 218 | sdh.utc = startTime.getValue( "s" ) ;
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| 219 | }
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| 220 | telescopeName = obsCols.telescopeName()(obsId) ;
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[1978] | 221 | Int nbeam = 0 ;
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[1974] | 222 | //
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| 223 | // ITERATION: FEED1
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| 224 | //
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[1978] | 225 | Int added1 = 0 ;
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| 226 | Int current1 = table_->nrow() ;
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[1974] | 227 | TableIterator iter1( t0, "FEED1" ) ;
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| 228 | while( !iter1.pastEnd() ) {
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| 229 | MeasurementSet t1( iter1.table() ) ;
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| 230 | ROScalarColumn<Int> mFeedCol( t1, "FEED1" ) ;
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| 231 | Int feedId = mFeedCol( 0 ) ; // assume FEED1 == FEED2
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| 232 | nbeam++ ;
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| 233 | //
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| 234 | // ITERATION: FIELD_ID
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| 235 | //
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[1978] | 236 | Int added2 = 0 ;
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| 237 | Int current2 = table_->nrow() ;
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[1974] | 238 | TableIterator iter2( t1, "FIELD_ID" ) ;
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| 239 | while( !iter2.pastEnd() ) {
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| 240 | MeasurementSet t2( iter2.table() ) ;
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| 241 | ROScalarColumn<Int> mFieldIdCol( t2, "FIELD_ID" ) ;
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| 242 | Int fieldId = mFieldIdCol( 0 ) ;
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| 243 | ROScalarColumn<String> mFieldNameCol( fieldtab, "NAME" ) ;
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| 244 | ROScalarColumn<Int> mSrcIdCol( fieldtab, "SOURCE_ID" ) ;
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| 245 | String fieldName = mFieldNameCol( fieldId ) + "__" + String::toString(fieldId) ;
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| 246 | Int srcId = mSrcIdCol( fieldId ) ;
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| 247 | //
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| 248 | // ITERATION: DATA_DESC_ID
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| 249 | //
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[1978] | 250 | Int added3 = 0 ;
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| 251 | Int current3 = table_->nrow() ;
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[1974] | 252 | TableIterator iter3( t2, "DATA_DESC_ID" ) ;
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| 253 | while( !iter3.pastEnd() ) {
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| 254 | MeasurementSet t3( iter3.table() ) ;
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| 255 | ROScalarColumn<Int> mDDIdCol( t3, "DATA_DESC_ID" ) ;
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| 256 | Int ddId = mDDIdCol( 0 ) ;
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| 257 | ROMSDataDescColumns ddCols( ddtab ) ;
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| 258 | Int polId = ddCols.polarizationId()(ddId) ;
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| 259 | Int spwId = ddCols.spectralWindowId()(ddId) ;
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| 260 | // polarization information
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| 261 | ROMSPolarizationColumns polCols( poltab ) ;
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| 262 | Int npol = polCols.numCorr()(polId) ;
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| 263 | Vector<Int> corrtype = polCols.corrType()(polId) ;
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| 264 | //os_ << "npol = " << npol << LogIO::POST ;
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| 265 | //os_ << "corrtype = " << corrtype << LogIO::POST ;
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| 266 | if ( sdh.npol < npol ) sdh.npol = npol ;
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| 267 | if ( sdh.poltype == "" ) sdh.poltype = getPolType( corrtype[0] ) ;
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| 268 | // source information
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| 269 | MSSource srctabSel( srctab( srctab.col("SOURCE_ID") == srcId && srctab.col("SPECTRAL_WINDOW_ID") == spwId ) ) ;
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| 270 | //os_ << "srcId = " << srcId << " spwId = " << spwId << " nrow = " << srctabSel.nrow() << LogIO::POST ;
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| 271 | ROMSSourceColumns srcCols( srctabSel ) ;
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| 272 | String srcName = srcCols.name()(0) ;
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| 273 | //os_ << "srcName = " << srcName << LogIO::POST ;
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| 274 | Array<Double> srcPM = srcCols.properMotion()(0) ;
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| 275 | //os_ << "srcPM = " << srcPM << LogIO::POST ;
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| 276 | Array<Double> srcDir = srcCols.direction()(0) ;
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| 277 | //os_ << "srcDir = " << srcDir << LogIO::POST ;
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| 278 | Array<Double> sysVels = srcCols.sysvel()(0) ;
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| 279 | Double sysVel = 0.0 ;
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| 280 | if ( !sysVels.empty() ) {
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| 281 | //os_ << "sysVels.shape() = " << sysVels.shape() << LogIO::POST ;
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[1975] | 282 | // NB: assume all SYSVEL values are the same
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[1974] | 283 | Double sysVel = sysVels( IPosition(1,0) ) ;
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| 284 | }
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| 285 | //os_ << "sysVel = " << sysVel << LogIO::POST ;
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| 286 | MDirection md = srcCols.directionMeas()(0) ;
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| 287 | // for MOLECULES subtable
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| 288 | Int numLines = srcCols.numLines()(0) ;
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| 289 | //os_ << "numLines = " << numLines << LogIO::POST ;
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| 290 | Vector<Double> restFreqs( numLines, 0.0 ) ;
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| 291 | Vector<String> transitionName( numLines, "" ) ;
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| 292 | if ( numLines != 0 ) {
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| 293 | Array< Quantum<Double> > qRestFreqs = srcCols.restFrequencyQuant()(0) ;
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| 294 | for ( int i = 0 ; i < numLines ; i++ ) {
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| 295 | restFreqs[i] = qRestFreqs( IPosition( 1, i ) ).getValue( "Hz" ) ;
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| 296 | }
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| 297 | //os_ << "restFreqs = " << restFreqs << LogIO::POST ;
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| 298 | if ( srctabSel.tableDesc().isColumn( "TRANSITION" ) ) {
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| 299 | ROScalarColumn<String> transitionNameCol = srcCols.transition() ;
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| 300 | //os_ << "transitionNameCol.nrow() = " << transitionNameCol.nrow() << LogIO::POST ;
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| 301 | transitionName = transitionNameCol(0) ;
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| 302 | }
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| 303 | }
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| 304 | uInt molId = table_->molecules().addEntry( restFreqs, transitionName, transitionName ) ;
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| 305 | // spectral setup
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| 306 | MeasFrame mf( me, mp, md ) ;
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| 307 | ROMSSpWindowColumns spwCols( spwtab ) ;
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| 308 | MFrequency::Types freqRef = MFrequency::castType((uInt)(spwCols.measFreqRef()(spwId))) ;
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| 309 | Int nchan = spwCols.numChan()(spwId) ;
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| 310 | Bool even = False ;
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| 311 | if ( (nchan/2)*2 == nchan ) even = True ;
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| 312 | if ( sdh.nchan < nchan ) sdh.nchan = nchan ;
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| 313 | Quantum<Double> qtotbw = spwCols.totalBandwidthQuant()(spwId) ;
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| 314 | Double totbw = qtotbw.getValue( "Hz" ) ;
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| 315 | if ( sdh.bandwidth < totbw ) sdh.bandwidth = totbw ;
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| 316 | if ( sdh.freqref == "" )
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| 317 | //sdh.freqref = MFrequency::showType( freqRef ) ;
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| 318 | sdh.freqref = "LSRK" ;
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| 319 | if ( sdh.reffreq == -1.0 ) {
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| 320 | Quantum<Double> qreffreq = spwCols.refFrequencyQuant()(spwId) ;
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| 321 | if ( freqRef == MFrequency::LSRK ) {
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| 322 | sdh.reffreq = qreffreq.getValue("Hz") ;
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| 323 | }
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| 324 | else {
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| 325 | MFrequency::Convert tolsr( freqRef, MFrequency::Ref( MFrequency::LSRK, mf ) ) ;
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| 326 | sdh.reffreq = tolsr( qreffreq ).get("Hz").getValue() ;
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| 327 | }
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| 328 | }
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| 329 | Int refchan = nchan / 2 ;
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| 330 | IPosition refip( 1, refchan ) ;
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| 331 | Double refpix = 0.5*(nchan-1) ;
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| 332 | Double refval = 0.0 ;
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| 333 | Double increment = spwCols.chanWidthQuant()(spwId)(refip).getValue("Hz") ;
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| 334 | //os_ << "nchan = " << nchan << " refchan = " << refchan << "(even=" << even << ") refpix = " << refpix << LogIO::POST ;
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| 335 | Vector< Quantum<Double> > chanFreqs = spwCols.chanFreqQuant()(spwId) ;
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| 336 | if ( freqRef == MFrequency::LSRK ) {
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| 337 | if ( even ) {
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| 338 | IPosition refip0( 1, refchan-1 ) ;
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| 339 | Double refval0 = chanFreqs(refip0).getValue("Hz") ;
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| 340 | Double refval1 = chanFreqs(refip).getValue("Hz") ;
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| 341 | refval = 0.5 * ( refval0 + refval1 ) ;
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| 342 | }
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| 343 | else {
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| 344 | refval = chanFreqs(refip).getValue("Hz") ;
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| 345 | }
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| 346 | }
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| 347 | else {
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| 348 | MFrequency::Convert tolsr( freqRef, MFrequency::Ref( MFrequency::LSRK, mf ) ) ;
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| 349 | if ( even ) {
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| 350 | IPosition refip0( 1, refchan-1 ) ;
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| 351 | Double refval0 = chanFreqs(refip0).getValue("Hz") ;
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| 352 | Double refval1 = chanFreqs(refip).getValue("Hz") ;
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| 353 | refval = 0.5 * ( refval0 + refval1 ) ;
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| 354 | refval = tolsr( refval ).get("Hz").getValue() ;
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| 355 | }
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| 356 | else {
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| 357 | refval = tolsr( chanFreqs(refip) ).get("Hz").getValue() ;
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| 358 | }
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| 359 | }
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| 360 | uInt freqId = table_->frequencies().addEntry( refpix, refval, increment ) ;
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| 361 | if ( ifmap.find( spwId ) == ifmap.end() ) {
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| 362 | ifmap.insert( pair<Int, uInt>(spwId,freqId) ) ;
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| 363 | //os_ << "added to ifmap: (" << spwId << "," << freqId << ")" << LogIO::POST ;
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| 364 | }
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| 365 | // for TSYS and TCAL
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| 366 | MSSysCal caltabsel( caltab( caltab.col("ANTENNA_ID") == antenna_ && caltab.col("FEED_ID") == feedId && caltab.col("SPECTRAL_WINDOW_ID") == spwId ).sort("TIME") ) ;
|
---|
| 367 | //Vector<uInt> tcalidrange = addTcal( caltabsel ) ;
|
---|
| 368 | //
|
---|
| 369 | // ITERATION: SCAN_NUMBER
|
---|
| 370 | //
|
---|
[1978] | 371 | Int added4 = 0 ;
|
---|
| 372 | Int current4 = table_->nrow() ;
|
---|
[1974] | 373 | TableIterator iter4( t3, "SCAN_NUMBER" ) ;
|
---|
| 374 | while( !iter4.pastEnd() ) {
|
---|
| 375 | MeasurementSet t4( iter4.table() ) ;
|
---|
| 376 | ROScalarColumn<Int> mScanNumCol( t4, "SCAN_NUMBER" ) ;
|
---|
| 377 | Int scanNum = mScanNumCol( 0 ) ;
|
---|
| 378 | uInt cycle = 0 ;
|
---|
| 379 | //
|
---|
| 380 | // ITERATION: STATE_ID
|
---|
| 381 | //
|
---|
[1978] | 382 | Int added5 = 0 ;
|
---|
| 383 | Int current5 = table_->nrow() ;
|
---|
[1974] | 384 | TableIterator iter5( t4, "STATE_ID" ) ;
|
---|
| 385 | while( !iter5.pastEnd() ) {
|
---|
| 386 | MeasurementSet t5( iter5.table().sort( "TIME" ) ) ;
|
---|
| 387 | ROScalarColumn<Int> mStateIdCol( t5, "STATE_ID" ) ;
|
---|
| 388 | Int stateId = mStateIdCol( 0 ) ;
|
---|
| 389 | ROMSStateColumns stateCols( t5.state() ) ;
|
---|
| 390 | String obstype = stateCols.obsMode()(stateId) ;
|
---|
| 391 | if ( sdh.obstype == "" ) sdh.obstype = obstype ;
|
---|
| 392 |
|
---|
| 393 | Int nrow = t5.nrow() ;
|
---|
| 394 | Int prevnr = oldnr ;
|
---|
| 395 | Int addednr = 0 ;
|
---|
| 396 |
|
---|
| 397 | // SPECTRA, FLAG
|
---|
| 398 | ArrayColumn<Float> spCol( table_->table(), "SPECTRA" ) ;
|
---|
| 399 | ArrayColumn<uChar> flagCol( table_->table(), "FLAGTRA" ) ;
|
---|
| 400 | ROArrayColumn<Bool> mFlagCol( t5, "FLAG" ) ;
|
---|
| 401 | if ( isFloatData_ ) {
|
---|
| 402 | //os_ << "FLOAT_DATA exists" << LogIO::POST ;
|
---|
| 403 | ROArrayColumn<Float> mFloatDataCol( t5, "FLOAT_DATA" ) ;
|
---|
| 404 | IPosition cShape = mFloatDataCol.shape( 0 ) ;
|
---|
| 405 | IPosition newShape( 2, cShape[1], nrow ) ;
|
---|
| 406 | for ( int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 407 | table_->table().addRow( nrow ) ;
|
---|
| 408 | addednr += nrow ;
|
---|
| 409 | Int newnr = oldnr + nrow ;
|
---|
| 410 | RefRows rows( oldnr, newnr-1 ) ;
|
---|
| 411 | Slice paxis( ipol, 1, 1 ) ;
|
---|
| 412 | Slice caxis( 0, cShape[1], 1 ) ;
|
---|
| 413 | Slicer slicer( paxis, caxis ) ;
|
---|
| 414 | spCol.putColumnCells( rows, mFloatDataCol.getColumn(slicer).reform(newShape) ) ;
|
---|
| 415 | Array<Bool> flags = mFlagCol.getColumn(slicer).reform(newShape) ;
|
---|
| 416 | Array<uChar> flagtra( flags.shape() ) ;
|
---|
| 417 | convertArray( flagtra, flags ) ;
|
---|
| 418 | flagCol.putColumnCells( rows, flagtra ) ;
|
---|
| 419 | oldnr = newnr ;
|
---|
| 420 | }
|
---|
| 421 | if ( sdh.fluxunit == "" ) {
|
---|
| 422 | const TableRecord dataColKeys = mFloatDataCol.keywordSet() ;
|
---|
| 423 | if ( dataColKeys.isDefined( "UNIT" ) )
|
---|
| 424 | sdh.fluxunit = dataColKeys.asString( "UNIT" ) ;
|
---|
| 425 | }
|
---|
| 426 | }
|
---|
| 427 | else if ( isData_ ) {
|
---|
| 428 | //os_ << "DATA exists" << LogIO::POST ;
|
---|
| 429 | ROArrayColumn<Complex> mDataCol( t5, "DATA" ) ;
|
---|
| 430 | IPosition cShape = mDataCol.shape( 0 ) ;
|
---|
| 431 | IPosition newShape( 2, cShape[1], nrow ) ;
|
---|
| 432 | Bool crossOK = False ;
|
---|
| 433 | for ( int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 434 | //os_ << "corrtype[" << ipol << "] = " << corrtype[ipol] << LogIO::POST ;
|
---|
| 435 | if ( corrtype[ipol] == Stokes::XY || corrtype[ipol] == Stokes::YX
|
---|
| 436 | || corrtype[ipol] == Stokes::RL || corrtype[ipol] == Stokes::LR ) {
|
---|
| 437 | if ( !crossOK ) {
|
---|
| 438 | //os_ << "cross polarization data" << LogIO::POST ;
|
---|
| 439 | table_->table().addRow( nrow, True ) ;
|
---|
| 440 | addednr += nrow ;
|
---|
| 441 | //os_ << "table_->nrow() = " << table_->nrow() << LogIO::POST ;
|
---|
| 442 | Int newnr = oldnr + nrow ;
|
---|
| 443 | RefRows rows( oldnr, newnr-1 ) ;
|
---|
| 444 | Slice paxis( ipol, 1, 1 ) ;
|
---|
| 445 | Slice caxis( 0, cShape[1], 1 ) ;
|
---|
| 446 | Slicer slicer( paxis, caxis ) ;
|
---|
| 447 | Array<Complex> data = mDataCol.getColumn(slicer).reform(newShape) ;
|
---|
| 448 | spCol.putColumnCells( rows, real( data ) ) ;
|
---|
| 449 | Array<Bool> flags = mFlagCol.getColumn(slicer).reform(newShape) ;
|
---|
| 450 | Array<uChar> flagtra( flags.shape() ) ;
|
---|
| 451 | convertArray( flagtra, flags ) ;
|
---|
| 452 | flagCol.putColumnCells( rows, flagtra ) ;
|
---|
| 453 | oldnr = newnr ;
|
---|
| 454 | table_->table().addRow( nrow, True ) ;
|
---|
| 455 | addednr += nrow ;
|
---|
| 456 | newnr = oldnr + nrow ;
|
---|
| 457 | rows = RefRows( oldnr, newnr-1 ) ;
|
---|
| 458 | if ( corrtype[ipol] == Stokes::YX || corrtype[ipol] == Stokes::LR ) {
|
---|
| 459 | data = conj( data ) ;
|
---|
| 460 | }
|
---|
| 461 | spCol.putColumnCells( rows, imag( data ) ) ;
|
---|
| 462 | flagCol.putColumnCells( rows, flagtra ) ;
|
---|
| 463 | crossOK = True ;
|
---|
| 464 | oldnr = newnr ;
|
---|
| 465 | }
|
---|
| 466 | }
|
---|
| 467 | else {
|
---|
| 468 | table_->table().addRow( nrow, True ) ;
|
---|
| 469 | addednr += nrow ;
|
---|
| 470 | //os_ << "table_->nrow() = " << table_->nrow() << LogIO::POST ;
|
---|
| 471 | Int newnr = oldnr + nrow ;
|
---|
| 472 | RefRows rows( oldnr, newnr-1 ) ;
|
---|
| 473 | Slice paxis( ipol, 1, 1 ) ;
|
---|
| 474 | Slice caxis( 0, cShape[1], 1 ) ;
|
---|
| 475 | Slicer slicer( paxis, caxis ) ;
|
---|
| 476 | Array<Complex> data = mDataCol.getColumn(slicer).reform(newShape) ;
|
---|
| 477 | spCol.putColumnCells( rows, real( data ) ) ;
|
---|
| 478 | Array<Bool> flags = mFlagCol.getColumn(slicer).reform(newShape) ;
|
---|
| 479 | Array<uChar> flagtra( flags.shape() ) ;
|
---|
| 480 | convertArray( flagtra, flags ) ;
|
---|
| 481 | flagCol.putColumnCells( rows, flagtra ) ;
|
---|
| 482 | oldnr = newnr ;
|
---|
| 483 | }
|
---|
| 484 | }
|
---|
| 485 | if ( sdh.fluxunit == "" ) {
|
---|
| 486 | const TableRecord dataColKeys = mDataCol.keywordSet() ;
|
---|
| 487 | if ( dataColKeys.isDefined( "UNIT" ) )
|
---|
| 488 | sdh.fluxunit = dataColKeys.asString( "UNIT" ) ;
|
---|
| 489 | }
|
---|
| 490 | }
|
---|
| 491 |
|
---|
| 492 | // number of rows added in this cycle
|
---|
| 493 | //os_ << "prevnr = " << prevnr << LogIO::POST ;
|
---|
| 494 | //os_ << "addednr = " << addednr << LogIO::POST ;
|
---|
| 495 | RefRows rows( prevnr, prevnr+addednr-1 ) ;
|
---|
| 496 |
|
---|
| 497 | // CYCLENO
|
---|
| 498 | ScalarColumn<uInt> cyclenoCol( table_->table(), "CYCLENO" ) ;
|
---|
| 499 | Vector<uInt> cycleno( nrow ) ;
|
---|
| 500 | indgen( cycleno, cycle ) ;
|
---|
| 501 | for ( int i = 0 ; i < addednr ; i += nrow ) {
|
---|
| 502 | Int startrow = prevnr + i ;
|
---|
| 503 | Int endrow = startrow + nrow - 1 ;
|
---|
| 504 | RefRows prows( startrow, endrow ) ;
|
---|
| 505 | cyclenoCol.putColumnCells( prows, cycleno ) ;
|
---|
| 506 | }
|
---|
| 507 | cycle += nrow ;
|
---|
| 508 |
|
---|
| 509 | // POLNO
|
---|
| 510 | ScalarColumn<uInt> polNoCol( table_->table(), "POLNO" ) ;
|
---|
| 511 | Vector<uInt> polno( nrow ) ;
|
---|
| 512 | Int pidx = 0 ;
|
---|
| 513 | Bool crossOK = False ;
|
---|
| 514 | for ( int i = 0 ; i < npol ; i++ ) {
|
---|
| 515 | Vector<uInt> polnos = getPolNo( corrtype[i] ) ;
|
---|
| 516 | if ( polnos.size() > 1 ) {
|
---|
| 517 | if ( crossOK ) continue ;
|
---|
| 518 | else crossOK = True ;
|
---|
| 519 | }
|
---|
| 520 | for ( uInt j = 0 ; j < polnos.size() ; j++ ) {
|
---|
| 521 | Int startrow = prevnr + pidx * nrow ;
|
---|
| 522 | Int endrow = startrow + nrow - 1 ;
|
---|
| 523 | RefRows prows( startrow, endrow ) ;
|
---|
| 524 | polno = polnos[j] ;
|
---|
| 525 | polNoCol.putColumnCells( prows, polno ) ;
|
---|
| 526 | pidx++ ;
|
---|
| 527 | }
|
---|
| 528 | }
|
---|
| 529 |
|
---|
| 530 | // FLAGROW
|
---|
| 531 | ScalarColumn<uInt> flagRowCol( table_->table(), "FLAGROW" ) ;
|
---|
| 532 | ROScalarColumn<Bool> mFlagRowCol( t5, "FLAG_ROW" ) ;
|
---|
| 533 | Vector<uInt> fr( nrow ) ;
|
---|
| 534 | convertArray( fr, mFlagRowCol.getColumn() ) ;
|
---|
| 535 | for ( int i = 0 ; i < addednr ; i += nrow ) {
|
---|
| 536 | Int startrow = prevnr + i ;
|
---|
| 537 | Int endrow = startrow + nrow - 1 ;
|
---|
| 538 | RefRows prows( startrow, endrow ) ;
|
---|
| 539 | flagRowCol.putColumnCells( prows, fr ) ;
|
---|
| 540 | }
|
---|
| 541 |
|
---|
| 542 | // TIME
|
---|
| 543 | MEpoch::ScalarColumn timeCol( table_->table(), "TIME" ) ;
|
---|
| 544 | MEpoch::ROScalarColumn mTimeCol( t5, "TIME" ) ;
|
---|
| 545 | Int tidx = prevnr ;
|
---|
| 546 | for ( Int i = 0 ; i < addednr ; i += nrow ) {
|
---|
| 547 | for ( Int j = 0 ; j < nrow ; j++ ) {
|
---|
| 548 | timeCol.put( tidx++, mTimeCol( j ) ) ;
|
---|
| 549 | }
|
---|
| 550 | }
|
---|
| 551 |
|
---|
| 552 | // INTERVAL
|
---|
| 553 | ScalarColumn<Double> intervalCol( table_->table(), "INTERVAL" ) ;
|
---|
| 554 | ROScalarColumn<Double> mIntervalCol( t5, "INTERVAL" ) ;
|
---|
| 555 | Vector<Double> integ = mIntervalCol.getColumn() ;
|
---|
| 556 | for ( int i = 0 ; i < addednr ; i += nrow ) {
|
---|
| 557 | Int startrow = prevnr + i ;
|
---|
| 558 | Int endrow = startrow + nrow - 1 ;
|
---|
| 559 | RefRows prows( startrow, endrow ) ;
|
---|
| 560 | intervalCol.putColumnCells( prows, integ ) ;
|
---|
| 561 | }
|
---|
| 562 |
|
---|
| 563 | // SRCTYPE
|
---|
| 564 | ScalarColumn<Int> srcTypeCol( table_->table(), "SRCTYPE" ) ;
|
---|
| 565 | Vector<Int> srcType( addednr, getSrcType( stateId ) ) ;
|
---|
| 566 | srcTypeCol.putColumnCells( rows, srcType ) ;
|
---|
| 567 |
|
---|
| 568 | // TSYS
|
---|
| 569 | ArrayColumn<Float> tsysCol( table_->table(), "TSYS" ) ;
|
---|
| 570 | Vector<Double> sysCalTime ;
|
---|
| 571 | if ( isSysCal_ ) {
|
---|
| 572 | sysCalTime = getSysCalTime( caltabsel, mTimeCol ) ;
|
---|
| 573 | tidx = prevnr ;
|
---|
| 574 | uInt calidx = 0 ;
|
---|
| 575 | for ( Int i = 0 ; i < nrow ; i++ ) {
|
---|
| 576 | Array<Float> tsys ;
|
---|
| 577 | calidx = getTsys( calidx, tsys, caltabsel, sysCalTime(i) ) ;
|
---|
| 578 | //os_ << "tsys = " << tsys << LogIO::POST ;
|
---|
| 579 | IPosition cShape = tsys.shape() ;
|
---|
| 580 | //os_ << "cShape = " << cShape << LogIO::POST ;
|
---|
| 581 | if ( cShape.size() == 0 ) {
|
---|
| 582 | cShape = IPosition( 1, npol ) ;
|
---|
| 583 | tsys.resize( cShape ) ;
|
---|
| 584 | tsys = 1.0 ;
|
---|
| 585 | }
|
---|
| 586 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 587 | if ( cShape.nelements() == 1 ) {
|
---|
| 588 | Array<Float> subtsys( IPosition(1,1), tsys(IPosition(1,ipol)) ) ;
|
---|
| 589 | tsysCol.put( prevnr+i+nrow*ipol, subtsys ) ;
|
---|
| 590 | }
|
---|
| 591 | else {
|
---|
| 592 | Slice paxis( ipol, 1, 1 ) ;
|
---|
| 593 | Slice caxis( 0, cShape[1], 1 ) ;
|
---|
| 594 | Slicer slicer( paxis, caxis ) ;
|
---|
| 595 | Array<Float> subtsys = tsys( slicer ) ;
|
---|
| 596 | tsysCol.put( prevnr+i+nrow*ipol, subtsys ) ;
|
---|
| 597 | }
|
---|
| 598 | }
|
---|
| 599 | }
|
---|
| 600 | }
|
---|
| 601 | else {
|
---|
| 602 | Array<Float> tsys( IPosition( 2, 1, addednr ), 1.0 ) ;
|
---|
| 603 | tsysCol.putColumnCells( rows, tsys ) ;
|
---|
| 604 | }
|
---|
| 605 |
|
---|
| 606 | // DIRECTION, AZIMUTH, ELEVATION, SCANRATE
|
---|
| 607 | ArrayColumn<Double> dirCol( table_->table(), "DIRECTION" ) ;
|
---|
| 608 | ScalarColumn<Float> azCol( table_->table(), "AZIMUTH" ) ;
|
---|
| 609 | ScalarColumn<Float> elCol( table_->table(), "ELEVATION" ) ;
|
---|
| 610 | ArrayColumn<Double> scanRateCol( table_->table(), "SCANRATE" ) ;
|
---|
| 611 | Vector<Double> defaultScanrate( 2, 0.0 ) ;
|
---|
| 612 | uInt diridx = 0 ;
|
---|
| 613 | MDirection::Types dirType ;
|
---|
| 614 | if ( getPt_ ) {
|
---|
| 615 | for ( Int i = 0 ; i < nrow ; i++ ) {
|
---|
| 616 | Vector<Double> dir ;
|
---|
| 617 | Vector<Double> scanrate ;
|
---|
| 618 | String refString ;
|
---|
| 619 | diridx = getDirection( diridx, dir, scanrate, refString, pointCols, mTimeCol(i).get("s").getValue() ) ;
|
---|
| 620 | //os_ << "diridx = " << diridx << " dmTimeCol(" << i << ") = " << mTimeCol(i).get("s").getValue()-mTimeCol(0).get("s").getValue() << LogIO::POST ;
|
---|
| 621 | //os_ << "dir = " << dir << LogIO::POST ;
|
---|
| 622 | //os_ << "scanrate = " << scanrate << LogIO::POST ;
|
---|
| 623 | //os_ << "refString = " << refString << LogIO::POST ;
|
---|
| 624 | MDirection::getType( dirType, refString ) ;
|
---|
| 625 | //os_ << "dirType = " << dirType << LogIO::POST ;
|
---|
| 626 | mf.resetEpoch( mTimeCol(i) ) ;
|
---|
| 627 | mf.resetDirection( MDirection( MVDirection(dir), dirType ) ) ;
|
---|
| 628 | if ( refString == "J2000" ) {
|
---|
| 629 | //os_ << "J2000" << LogIO::POST ;
|
---|
| 630 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 631 | dirCol.put( prevnr+i+nrow*ipol, dir ) ;
|
---|
| 632 | }
|
---|
| 633 | MDirection::Convert toazel( dirType, MDirection::Ref( MDirection::AZEL, mf ) ) ;
|
---|
| 634 | Vector<Double> azel = toazel( dir ).getAngle("rad").getValue() ;
|
---|
| 635 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 636 | azCol.put( prevnr+i+nrow*ipol, azel(0) ) ;
|
---|
| 637 | elCol.put( prevnr+i+nrow*ipol, azel(1) ) ;
|
---|
| 638 | }
|
---|
| 639 | }
|
---|
| 640 | else if ( refString(0,4) == "AZEL" ) {
|
---|
| 641 | //os_ << "AZEL" << LogIO::POST ;
|
---|
| 642 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 643 | azCol.put( prevnr+i+nrow*ipol, dir(0) ) ;
|
---|
| 644 | elCol.put( prevnr+i+nrow*ipol, dir(1) ) ;
|
---|
| 645 | }
|
---|
| 646 | MDirection::Convert toj2000( dirType, MDirection::Ref( MDirection::J2000, mf ) ) ;
|
---|
| 647 | Vector<Double> newdir = toj2000( dir ).getAngle("rad").getValue() ;
|
---|
| 648 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 649 | dirCol.put( prevnr+i+nrow*ipol, newdir ) ;
|
---|
| 650 | }
|
---|
| 651 | }
|
---|
| 652 | else {
|
---|
| 653 | //os_ << "OTHER: " << refString << LogIO::POST ;
|
---|
| 654 | MDirection::Convert toazel( dirType, MDirection::Ref( MDirection::AZEL, mf ) ) ;
|
---|
| 655 | Vector<Double> azel = toazel( dir ).getAngle("rad").getValue() ;
|
---|
| 656 | MDirection::Convert toj2000( dirType, MDirection::Ref( MDirection::J2000, mf ) ) ;
|
---|
| 657 | Vector<Double> newdir = toj2000( dir ).getAngle("rad").getValue() ;
|
---|
| 658 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 659 | dirCol.put( prevnr+i+nrow*ipol, newdir ) ;
|
---|
| 660 | azCol.put( prevnr+i+nrow*ipol, dir(0) ) ;
|
---|
| 661 | elCol.put( prevnr+i+nrow*ipol, dir(1) ) ;
|
---|
| 662 | }
|
---|
| 663 | }
|
---|
| 664 | if ( scanrate.size() != 0 ) {
|
---|
| 665 | //os_ << "scanrate.size() = " << scanrate.size() << LogIO::POST ;
|
---|
| 666 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 667 | scanRateCol.put( prevnr+i+nrow*ipol, scanrate ) ;
|
---|
| 668 | }
|
---|
| 669 | }
|
---|
| 670 | else {
|
---|
| 671 | //os_ << "scanrate.size() = " << scanrate.size() << LogIO::POST ;
|
---|
| 672 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 673 | scanRateCol.put( prevnr+i+nrow*ipol, defaultScanrate ) ;
|
---|
| 674 | }
|
---|
| 675 | }
|
---|
| 676 | }
|
---|
| 677 | }
|
---|
| 678 | else {
|
---|
| 679 | // All directions are set to source direction
|
---|
| 680 | ROArrayMeasColumn<MDirection> dmcol = pointCols.directionMeasCol() ;
|
---|
| 681 | ROArrayColumn<Double> dcol = pointCols.direction() ;
|
---|
| 682 | IPosition ip( dmcol(0).shape().nelements(), 0 ) ;
|
---|
| 683 | IPosition outp( 1, 2 ) ;
|
---|
| 684 | String ref = dmcol(0)(ip).getRefString() ;
|
---|
| 685 | Slice ds( 0, 2, 1 ) ;
|
---|
| 686 | Slice ds0( 0, 1, 1 ) ;
|
---|
| 687 | Slicer dslice0( ds, ds0 ) ;
|
---|
| 688 | Vector<Double> defaultDir = dcol(0)(dslice0).reform(outp) ;
|
---|
| 689 | MDirection::getType( dirType, "J2000" ) ;
|
---|
| 690 | mf.resetDirection( MDirection( MVDirection(srcDir), dirType ) ) ;
|
---|
| 691 | if ( ref != "J2000" ) {
|
---|
| 692 | mf.resetEpoch( pointCols.timeMeas()(0) ) ;
|
---|
| 693 | MDirection::Convert toj2000( dirType, MDirection::Ref( MDirection::J2000, mf ) ) ;
|
---|
| 694 | defaultDir = toj2000( defaultDir ).getAngle("rad").getValue() ;
|
---|
| 695 | }
|
---|
| 696 | for ( Int i = 0 ; i < nrow ; i++ ) {
|
---|
| 697 | mf.resetEpoch( mTimeCol(i) ) ;
|
---|
| 698 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 699 | Int localidx = prevnr+i+nrow*ipol ;
|
---|
| 700 | MDirection::Convert toazel( dirType, MDirection::Ref( MDirection::AZEL, mf ) ) ;
|
---|
| 701 | Vector<Double> azel = toazel( defaultDir ).getAngle("rad").getValue() ;
|
---|
| 702 | azCol.put( localidx, azel(0) ) ;
|
---|
| 703 | elCol.put( localidx, azel(1) ) ;
|
---|
| 704 | dirCol.put( localidx, defaultDir ) ;
|
---|
| 705 | scanRateCol.put( localidx, defaultScanrate ) ;
|
---|
| 706 | }
|
---|
| 707 | }
|
---|
| 708 | }
|
---|
| 709 |
|
---|
| 710 | // TCAL_ID
|
---|
| 711 | ScalarColumn<uInt> tcalIdCol( table_->table(), "TCAL_ID" ) ;
|
---|
| 712 | if ( isSysCal_ ) {
|
---|
| 713 | for( Int irow = 0 ; irow < nrow ; irow++ ) {
|
---|
| 714 | Vector<uInt> tcalids = getTcalId( feedId, spwId, sysCalTime[irow] ) ;
|
---|
| 715 | if ( tcalids.size() == 0 ) {
|
---|
| 716 | tcalids.resize( npol ) ;
|
---|
| 717 | tcalids = 0 ;
|
---|
| 718 | }
|
---|
| 719 | for ( Int ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 720 | tcalIdCol.put( prevnr+irow+nrow*ipol, tcalids[ipol] ) ;
|
---|
| 721 | }
|
---|
| 722 | }
|
---|
| 723 | }
|
---|
| 724 | else {
|
---|
| 725 | Vector<uInt> tcalid( addednr, 0 ) ;
|
---|
| 726 | tcalIdCol.putColumnCells( rows, tcalid ) ;
|
---|
| 727 | }
|
---|
| 728 |
|
---|
| 729 | // WEATHER_ID
|
---|
| 730 | uInt widprev = 0 ;
|
---|
| 731 | Vector<uInt> vWid( nrow, 0 ) ;
|
---|
| 732 | if ( isWeather_ ) {
|
---|
| 733 | for ( int j = 0 ; j < nrow ; j++ ) {
|
---|
| 734 | //os_ << "TIME value = " << mTimeCol( j ).get("s").getValue() << LogIO::POST ;
|
---|
| 735 | uInt wid = getWeatherId( widprev, mTimeCol( j ).get("s").getValue() ) ;
|
---|
| 736 | //os_ << "wid = " << wid << LogIO::POST ;
|
---|
| 737 | vWid[j] = wid ;
|
---|
| 738 | widprev = wid ;
|
---|
| 739 | }
|
---|
| 740 | }
|
---|
| 741 |
|
---|
| 742 | ScalarColumn<uInt> weatherIdCol( table_->table(), "WEATHER_ID" ) ;
|
---|
| 743 | for ( int i = 0 ; i < addednr ; i += nrow ) {
|
---|
| 744 | Int startrow = prevnr + i ;
|
---|
| 745 | Int endrow = startrow + nrow - 1 ;
|
---|
| 746 | RefRows prows( startrow, endrow ) ;
|
---|
| 747 | weatherIdCol.putColumnCells( prows, vWid ) ;
|
---|
| 748 | }
|
---|
| 749 |
|
---|
| 750 | //os_ << "field: " << fieldId << " scan: " << scanNum << " obs: " << obsId << " state: " << stateId << " ddid: " << ddId << endl ;
|
---|
| 751 | //os_ << "t.nrow() = " << t5.nrow() << endl ;
|
---|
[1978] | 752 | added5 += addednr ;
|
---|
[1974] | 753 | iter5.next() ;
|
---|
| 754 | }
|
---|
[1978] | 755 |
|
---|
| 756 | // SCANNO
|
---|
| 757 | RefRows rows5( current5, current5+added5-1 ) ;
|
---|
| 758 | Vector<uInt> scanno( added5, scanNum ) ;
|
---|
| 759 | ScalarColumn<uInt> scannoCol( table_->table(), "SCANNO" ) ;
|
---|
| 760 | scannoCol.putColumnCells( rows5, scanno ) ;
|
---|
| 761 |
|
---|
| 762 | added4 += added5 ;
|
---|
[1974] | 763 | iter4.next() ;
|
---|
| 764 | }
|
---|
[1978] | 765 |
|
---|
| 766 | // IFNO
|
---|
| 767 | RefRows rows4( current4, current4+added4-1 ) ;
|
---|
| 768 | Vector<uInt> shareduIArr( added4, spwId ) ;
|
---|
| 769 | ScalarColumn<uInt> shareduIArrCol( table_->table(), "IFNO" ) ;
|
---|
| 770 | shareduIArrCol.putColumnCells( rows4, shareduIArr ) ;
|
---|
| 771 |
|
---|
| 772 | // FREQ_ID
|
---|
| 773 | shareduIArr = ifmap[spwId] ;
|
---|
| 774 | shareduIArrCol.attach( table_->table(), "FREQ_ID" ) ;
|
---|
| 775 | shareduIArrCol.putColumnCells( rows4, shareduIArr ) ;
|
---|
| 776 |
|
---|
| 777 | // MOLECULE_ID
|
---|
| 778 | shareduIArr = molId ;
|
---|
| 779 | shareduIArrCol.attach( table_->table(), "MOLECULE_ID" ) ;
|
---|
| 780 | shareduIArrCol.putColumnCells( rows4, shareduIArr ) ;
|
---|
| 781 |
|
---|
| 782 | // SRCNAME
|
---|
| 783 | ScalarColumn<String> srcNameCol( table_->table(), "SRCNAME" ) ;
|
---|
| 784 | Vector<String> vSrcName( added4, srcName ) ;
|
---|
| 785 | srcNameCol.putColumnCells( rows4, vSrcName ) ;
|
---|
| 786 |
|
---|
| 787 | // SRCVELOCITY, SRCPROPERMOTION and SRCDIRECTION
|
---|
| 788 | // no reference conversion for direction at the moment (assume J2000)
|
---|
| 789 | // no reference conversion for velocity at the moment (assume LSRK)
|
---|
| 790 | Matrix<Double> sharedDArr( 2, added4 ) ;
|
---|
| 791 | for ( uInt icol = 0 ; icol < added4 ; icol++ ) {
|
---|
| 792 | sharedDArr.column(icol) = srcPM ;
|
---|
| 793 | }
|
---|
| 794 | ArrayColumn<Double> sharedDArrCol( table_->table(), "SRCPROPERMOTION" ) ;
|
---|
| 795 | sharedDArrCol.putColumnCells( rows4, sharedDArr ) ;
|
---|
| 796 | for ( uInt icol = 0 ; icol < added4 ; icol++ ) {
|
---|
| 797 | sharedDArr.column(icol) = srcDir ;
|
---|
| 798 | }
|
---|
| 799 | sharedDArrCol.attach( table_->table(), "SRCDIRECTION" ) ;
|
---|
| 800 | sharedDArrCol.putColumnCells( rows4, sharedDArr ) ;
|
---|
| 801 | ScalarColumn<Double> sysVelCol( table_->table(), "SRCVELOCITY" ) ;
|
---|
| 802 | Vector<Double> sysVelArr( added4, sysVel ) ;
|
---|
| 803 | sysVelCol.putColumnCells( rows4, sysVelArr ) ;
|
---|
| 804 |
|
---|
| 805 | added3 += added4 ;
|
---|
[1974] | 806 | iter3.next() ;
|
---|
| 807 | }
|
---|
[1978] | 808 |
|
---|
| 809 | // FIELDNAME
|
---|
| 810 | RefRows rows3( current3, current3+added3-1 ) ;
|
---|
| 811 | Vector<String> vFieldName( added3, fieldName ) ;
|
---|
| 812 | ScalarColumn<String> fieldNameCol( table_->table(), "FIELDNAME" ) ;
|
---|
| 813 | fieldNameCol.putColumnCells( rows3, vFieldName ) ;
|
---|
| 814 |
|
---|
| 815 | added2 += added3 ;
|
---|
[1974] | 816 | iter2.next() ;
|
---|
| 817 | }
|
---|
[1978] | 818 |
|
---|
| 819 | // BEAMNO
|
---|
| 820 | RefRows rows2( current2, current2+added2-1 ) ;
|
---|
| 821 | Vector<uInt> beamno( added2, feedId ) ;
|
---|
| 822 | ScalarColumn<uInt> beamnoCol( table_->table(), "BEAMNO" ) ;
|
---|
| 823 | beamnoCol.putColumnCells( rows2, beamno ) ;
|
---|
| 824 |
|
---|
| 825 | // FOCUS_ID
|
---|
| 826 | // tentative
|
---|
| 827 | beamnoCol.attach( table_->table(), "FOCUS_ID" ) ;
|
---|
| 828 | beamno = 0 ;
|
---|
| 829 | beamnoCol.putColumnCells( rows2, beamno ) ;
|
---|
| 830 |
|
---|
| 831 | added1 += added2 ;
|
---|
[1974] | 832 | iter1.next() ;
|
---|
| 833 | }
|
---|
| 834 | if ( sdh.nbeam < nbeam ) sdh.nbeam = nbeam ;
|
---|
[1978] | 835 |
|
---|
| 836 | added0 += added1 ;
|
---|
[1974] | 837 | iter0.next() ;
|
---|
| 838 | }
|
---|
| 839 |
|
---|
[1978] | 840 | // REFBEAMNO
|
---|
| 841 | // set 0 at the moment
|
---|
| 842 | ScalarColumn<Int> sharedICol( table_->table(), "REFBEAMNO" ) ;
|
---|
| 843 | Vector<Int> sharedI( added0, 0 ) ;
|
---|
| 844 | sharedICol.putColumn( sharedI ) ;
|
---|
| 845 |
|
---|
| 846 | // OPACITY
|
---|
| 847 | // not used?
|
---|
| 848 | ScalarColumn<Float> opacityCol( table_->table(), "OPACITY" ) ;
|
---|
| 849 | Vector<Float> opacity( added0, 0.0 ) ;
|
---|
| 850 | opacityCol.putColumn( opacity ) ;
|
---|
| 851 |
|
---|
| 852 | // FIT_ID
|
---|
| 853 | // nothing to do
|
---|
| 854 | sharedICol.attach( table_->table(), "FIT_ID" ) ;
|
---|
| 855 | sharedI = -1 ;
|
---|
| 856 | sharedICol.putColumn( sharedI ) ;
|
---|
| 857 |
|
---|
| 858 |
|
---|
| 859 | // Table Keywords
|
---|
[1974] | 860 | sdh.nif = ifmap.size() ;
|
---|
| 861 | String antennaName = antCols.name()(antenna_) ;
|
---|
| 862 | if ( antennaName == telescopeName ) {
|
---|
| 863 | sdh.antennaname = antennaName ;
|
---|
| 864 | }
|
---|
| 865 | else {
|
---|
| 866 | sdh.antennaname = telescopeName + "//" + antennaName ;
|
---|
| 867 | }
|
---|
| 868 | if ( stationName != "" ) {
|
---|
| 869 | sdh.antennaname += "@" + stationName ;
|
---|
| 870 | }
|
---|
| 871 | sdh.antennaposition = antCols.position()(antenna_);
|
---|
| 872 | ROMSPointingColumns pointingCols( mstable_.pointing() ) ;
|
---|
| 873 | String dirref = pointingCols.direction().keywordSet().asRecord("MEASINFO").asString("Ref") ;
|
---|
| 874 | if ( dirref == "AZELGEO" || dirref == "AZEL" ) {
|
---|
| 875 | dirref = "J2000" ;
|
---|
| 876 | }
|
---|
| 877 | sscanf( dirref.chars()+1, "%f", &sdh.equinox ) ;
|
---|
| 878 | sdh.epoch = "UTC" ;
|
---|
| 879 | if (sdh.freqref == "TOPO") {
|
---|
| 880 | sdh.freqref = "TOPOCENT";
|
---|
| 881 | } else if (sdh.freqref == "GEO") {
|
---|
| 882 | sdh.freqref = "GEOCENTR";
|
---|
| 883 | } else if (sdh.freqref == "BARY") {
|
---|
| 884 | sdh.freqref = "BARYCENT";
|
---|
| 885 | } else if (sdh.freqref == "GALACTO") {
|
---|
| 886 | sdh.freqref = "GALACTOC";
|
---|
| 887 | } else if (sdh.freqref == "LGROUP") {
|
---|
| 888 | sdh.freqref = "LOCALGRP";
|
---|
| 889 | } else if (sdh.freqref == "CMB") {
|
---|
| 890 | sdh.freqref = "CMBDIPOL";
|
---|
| 891 | } else if (sdh.freqref == "REST") {
|
---|
| 892 | sdh.freqref = "SOURCE";
|
---|
| 893 | }
|
---|
| 894 | table_->setHeader( sdh ) ;
|
---|
| 895 | }
|
---|
| 896 |
|
---|
| 897 | void MSFiller::close()
|
---|
| 898 | {
|
---|
| 899 | tablesel_.closeSubTables() ;
|
---|
| 900 | mstable_.closeSubTables() ;
|
---|
| 901 | tablesel_.unlock() ;
|
---|
| 902 | mstable_.unlock() ;
|
---|
| 903 | }
|
---|
| 904 |
|
---|
| 905 | void MSFiller::fillId( uInt idx, const char *colname, RefRows &rows )
|
---|
| 906 | {
|
---|
| 907 | ScalarColumn<uInt> col( table_->table(), colname ) ;
|
---|
| 908 | Vector<uInt> ids( rows.nrow(), idx ) ;
|
---|
| 909 | col.putColumnCells( rows, ids ) ;
|
---|
| 910 | }
|
---|
| 911 |
|
---|
| 912 | void MSFiller::fillId( Int idx, const char *colname, RefRows &rows )
|
---|
| 913 | {
|
---|
| 914 | ScalarColumn<Int> col( table_->table(), colname ) ;
|
---|
| 915 | Vector<Int> ids( rows.nrow(), idx ) ;
|
---|
| 916 | col.putColumnCells( rows, ids ) ;
|
---|
| 917 | }
|
---|
| 918 |
|
---|
| 919 | Int MSFiller::getSrcType( Int stateId )
|
---|
| 920 | {
|
---|
| 921 | MSState statetab = mstable_.state() ;
|
---|
| 922 | ROScalarColumn<String> obsModeCol( statetab, "OBS_MODE" ) ;
|
---|
| 923 | String obsMode = obsModeCol( stateId ) ;
|
---|
| 924 | ROScalarColumn<Bool> sigCol( statetab, "SIG" ) ;
|
---|
| 925 | ROScalarColumn<Bool> refCol( statetab, "REF" ) ;
|
---|
| 926 | Bool sig = sigCol( stateId ) ;
|
---|
| 927 | Bool ref = refCol( stateId ) ;
|
---|
| 928 | //os_ << "OBS_MODE = " << obsMode << LogIO::POST ;
|
---|
| 929 |
|
---|
| 930 | // determine separator
|
---|
| 931 | String sep = "" ;
|
---|
| 932 | if ( obsMode.find( ":" ) != String::npos ) {
|
---|
| 933 | sep = ":" ;
|
---|
| 934 | }
|
---|
| 935 | else if ( obsMode.find( "." ) != String::npos ) {
|
---|
| 936 | sep = "." ;
|
---|
| 937 | }
|
---|
| 938 |
|
---|
| 939 | // determine SRCTYPE
|
---|
| 940 | Int srcType = SrcType::NOTYPE ;
|
---|
| 941 | if ( sep == ":" ) {
|
---|
| 942 | // sep == ":"
|
---|
| 943 | //
|
---|
| 944 | // GBT case
|
---|
| 945 | //
|
---|
| 946 | // obsMode1=Nod
|
---|
| 947 | // NOD
|
---|
| 948 | // obsMode1=OffOn
|
---|
| 949 | // obsMode2=PSWITCHON: PSON
|
---|
| 950 | // obsMode2=PSWITCHOFF: PSOFF
|
---|
| 951 | // obsMode1=??
|
---|
| 952 | // obsMode2=FSWITCH:
|
---|
| 953 | // SIG=1: FSON
|
---|
| 954 | // REF=1: FSOFF
|
---|
| 955 | Int epos = obsMode.find_first_of( sep ) ;
|
---|
| 956 | Int nextpos = obsMode.find_first_of( sep, epos+1 ) ;
|
---|
| 957 | String obsMode1 = obsMode.substr( 0, epos ) ;
|
---|
| 958 | String obsMode2 = obsMode.substr( epos+1, nextpos-epos-1 ) ;
|
---|
| 959 | if ( obsMode1 == "Nod" ) {
|
---|
| 960 | srcType = SrcType::NOD ;
|
---|
| 961 | }
|
---|
| 962 | else if ( obsMode1 == "OffOn" ) {
|
---|
| 963 | if ( obsMode2 == "PSWITCHON" ) srcType = SrcType::PSON ;
|
---|
| 964 | if ( obsMode2 == "PSWITCHOFF" ) srcType = SrcType::PSOFF ;
|
---|
| 965 | }
|
---|
| 966 | else {
|
---|
| 967 | if ( obsMode2 == "FSWITCH" ) {
|
---|
| 968 | if ( sig ) srcType = SrcType::FSON ;
|
---|
| 969 | if ( ref ) srcType = SrcType::FSOFF ;
|
---|
| 970 | }
|
---|
| 971 | }
|
---|
| 972 | }
|
---|
| 973 | else if ( sep == "." ) {
|
---|
| 974 | // sep == "."
|
---|
| 975 | //
|
---|
| 976 | // ALMA & EVLA case (MS via ASDM)
|
---|
| 977 | //
|
---|
| 978 | // obsMode1=CALIBRATE_*
|
---|
| 979 | // obsMode2=ON_SOURCE: PONCAL
|
---|
| 980 | // obsMode2=OFF_SOURCE: POFFCAL
|
---|
| 981 | // obsMode1=OBSERVE_TARGET
|
---|
| 982 | // obsMode2=ON_SOURCE: PON
|
---|
| 983 | // obsMode2=OFF_SOURCE: POFF
|
---|
| 984 | Int epos = obsMode.find_first_of( sep ) ;
|
---|
| 985 | Int nextpos = obsMode.find_first_of( sep, epos+1 ) ;
|
---|
| 986 | String obsMode1 = obsMode.substr( 0, epos ) ;
|
---|
| 987 | String obsMode2 = obsMode.substr( epos+1, nextpos-epos-1 ) ;
|
---|
| 988 | if ( obsMode1.find( "CALIBRATE_" ) == 0 ) {
|
---|
| 989 | if ( obsMode2 == "ON_SOURCE" ) srcType = SrcType::PONCAL ;
|
---|
| 990 | if ( obsMode2 == "OFF_SOURCE" ) srcType = SrcType::POFFCAL ;
|
---|
| 991 | }
|
---|
| 992 | else if ( obsMode1 == "OBSERVE_TARGET" ) {
|
---|
| 993 | if ( obsMode2 == "ON_SOURCE" ) srcType = SrcType::PSON ;
|
---|
| 994 | if ( obsMode2 == "OFF_SOURCE" ) srcType = SrcType::PSOFF ;
|
---|
| 995 | }
|
---|
| 996 | }
|
---|
| 997 | else {
|
---|
| 998 | if ( sig ) srcType = SrcType::SIG ;
|
---|
| 999 | if ( ref ) srcType = SrcType::REF ;
|
---|
| 1000 | }
|
---|
| 1001 |
|
---|
| 1002 | //os_ << "srcType = " << srcType << LogIO::POST ;
|
---|
| 1003 |
|
---|
| 1004 | return srcType ;
|
---|
| 1005 | }
|
---|
| 1006 |
|
---|
| 1007 | Vector<uInt> MSFiller::getPolNo( Int corrType )
|
---|
| 1008 | {
|
---|
| 1009 | Vector<uInt> polno( 1 ) ;
|
---|
| 1010 |
|
---|
| 1011 | if ( corrType == Stokes::I || corrType == Stokes::RR || corrType == Stokes::XX ) {
|
---|
| 1012 | polno = 0 ;
|
---|
| 1013 | }
|
---|
| 1014 | else if ( corrType == Stokes::Q || corrType == Stokes::LL || corrType == Stokes::YY ) {
|
---|
| 1015 | polno = 1 ;
|
---|
| 1016 | }
|
---|
| 1017 | else if ( corrType == Stokes::U ) {
|
---|
| 1018 | polno = 2 ;
|
---|
| 1019 | }
|
---|
| 1020 | else if ( corrType == Stokes::V ) {
|
---|
| 1021 | polno = 3 ;
|
---|
| 1022 | }
|
---|
| 1023 | else if ( corrType == Stokes::RL || corrType == Stokes::XY || corrType == Stokes::LR || corrType == Stokes::RL ) {
|
---|
| 1024 | polno.resize( 2 ) ;
|
---|
| 1025 | polno[0] = 2 ;
|
---|
| 1026 | polno[1] = 3 ;
|
---|
| 1027 | }
|
---|
| 1028 | else if ( corrType == Stokes::Plinear ) {
|
---|
| 1029 | polno[0] = 1 ;
|
---|
| 1030 | }
|
---|
| 1031 | else if ( corrType == Stokes::Pangle ) {
|
---|
| 1032 | polno[0] = 2 ;
|
---|
| 1033 | }
|
---|
| 1034 | else {
|
---|
| 1035 | polno = 99 ;
|
---|
| 1036 | }
|
---|
| 1037 | //os_ << "polno = " << polno << LogIO::POST ;
|
---|
| 1038 |
|
---|
| 1039 | return polno ;
|
---|
| 1040 | }
|
---|
| 1041 |
|
---|
| 1042 | String MSFiller::getPolType( Int corrType )
|
---|
| 1043 | {
|
---|
| 1044 | String poltype = "" ;
|
---|
| 1045 |
|
---|
| 1046 | if ( corrType == Stokes::I || corrType == Stokes::Q || corrType == Stokes::U || corrType == Stokes::V )
|
---|
| 1047 | poltype = "stokes" ;
|
---|
| 1048 | else if ( corrType == Stokes::XX || corrType == Stokes::YY || corrType == Stokes::XY || corrType == Stokes::YX )
|
---|
| 1049 | poltype = "linear" ;
|
---|
| 1050 | else if ( corrType == Stokes::RR || corrType == Stokes::LL || corrType == Stokes::RL || corrType == Stokes::LR )
|
---|
| 1051 | poltype = "circular" ;
|
---|
| 1052 | else if ( corrType == Stokes::Plinear || corrType == Stokes::Pangle )
|
---|
| 1053 | poltype = "linpol" ;
|
---|
| 1054 |
|
---|
| 1055 | return poltype ;
|
---|
| 1056 | }
|
---|
| 1057 |
|
---|
| 1058 | void MSFiller::fillWeather()
|
---|
| 1059 | {
|
---|
| 1060 | MSWeather mWeather( mstable_.weather() ) ;
|
---|
| 1061 | MSWeather mWeatherSel( mWeather( mWeather.col("ANTENNA_ID") == antenna_ ).sort("TIME") ) ;
|
---|
| 1062 | //os_ << "mWeatherSel.nrow() = " << mWeatherSel.nrow() << LogIO::POST ;
|
---|
| 1063 | if ( mWeatherSel.nrow() == 0 ) {
|
---|
| 1064 | os_ << "No rows with ANTENNA_ID = " << antenna_ << ", Try -1..." << LogIO::POST ;
|
---|
| 1065 | mWeatherSel = MSWeather( mWeather( mWeather.col("ANTENNA_ID") == -1 ) ) ;
|
---|
| 1066 | if ( mWeatherSel.nrow() == 0 ) {
|
---|
| 1067 | os_ << "No rows in WEATHER table" << LogIO::POST ;
|
---|
| 1068 | }
|
---|
| 1069 | }
|
---|
| 1070 | ROMSWeatherColumns mWeatherCols( mWeatherSel ) ;
|
---|
| 1071 | Int wnrow = mWeatherCols.nrow() ;
|
---|
| 1072 | //os_ << "wnrow = " << wnrow << LogIO::POST ;
|
---|
| 1073 |
|
---|
| 1074 | if ( wnrow == 0 )
|
---|
| 1075 | return ;
|
---|
| 1076 |
|
---|
| 1077 | Table wtab = table_->weather().table() ;
|
---|
| 1078 | wtab.addRow( wnrow ) ;
|
---|
| 1079 |
|
---|
| 1080 | ScalarColumn<Float> tempCol( wtab, "TEMPERATURE" ) ;
|
---|
| 1081 | tempCol.putColumn( mWeatherCols.temperature() ) ;
|
---|
| 1082 | ScalarColumn<Float> pressCol( wtab, "PRESSURE" ) ;
|
---|
| 1083 | pressCol.putColumn( mWeatherCols.pressure() ) ;
|
---|
| 1084 | ScalarColumn<Float> humCol( wtab, "HUMIDITY" ) ;
|
---|
| 1085 | humCol.putColumn( mWeatherCols.relHumidity() ) ;
|
---|
| 1086 | ScalarColumn<Float> windVelCol( wtab, "WINDSPEED" ) ;
|
---|
| 1087 | windVelCol.putColumn( mWeatherCols.windSpeed() ) ;
|
---|
| 1088 | ScalarColumn<Float> windDirCol( wtab, "WINDAZ" ) ;
|
---|
| 1089 | windDirCol.putColumn( mWeatherCols.windDirection() ) ;
|
---|
| 1090 | Vector<uInt> ids( wnrow ) ;
|
---|
| 1091 | indgen( ids ) ;
|
---|
| 1092 | ScalarColumn<uInt> idCol( wtab, "ID" ) ;
|
---|
| 1093 | idCol.putColumn( ids ) ;
|
---|
| 1094 |
|
---|
| 1095 | String tUnit = mWeatherCols.timeQuant().getUnits() ;
|
---|
| 1096 | mwTime_ = mWeatherCols.time().getColumn() ;
|
---|
| 1097 | if ( tUnit == "d" )
|
---|
| 1098 | mwTime_ *= 86400.0 ;
|
---|
| 1099 | String iUnit = mWeatherCols.intervalQuant().getUnits() ;
|
---|
| 1100 | mwInterval_ = mWeatherCols.interval().getColumn() ;
|
---|
| 1101 | if ( iUnit == "d" )
|
---|
| 1102 | mwInterval_ *= 86400.0 ;
|
---|
| 1103 | //os_ << "mwTime[0] = " << mwTime_[0] << " mwInterval[0] = " << mwInterval_[0] << LogIO::POST ;
|
---|
| 1104 | }
|
---|
| 1105 |
|
---|
| 1106 | void MSFiller::fillFocus()
|
---|
| 1107 | {
|
---|
| 1108 | // tentative
|
---|
| 1109 | Table tab = table_->focus().table() ;
|
---|
| 1110 | tab.addRow( 1 ) ;
|
---|
| 1111 | ScalarColumn<uInt> idCol( tab, "ID" ) ;
|
---|
| 1112 | idCol.put( 0, 0 ) ;
|
---|
| 1113 | }
|
---|
| 1114 |
|
---|
| 1115 | void MSFiller::fillTcal()
|
---|
| 1116 | {
|
---|
| 1117 | MSSysCal sctab = mstable_.sysCal() ;
|
---|
| 1118 | if ( sctab.nrow() == 0 ) {
|
---|
| 1119 | os_ << "No SysCal rows" << LogIO::POST ;
|
---|
| 1120 | return ;
|
---|
| 1121 | }
|
---|
| 1122 | Bool isSp = sctab.tableDesc().isColumn( "TCAL_SPECTRUM" ) ;
|
---|
| 1123 | MSSysCal sctabsel( sctab( sctab.col("ANTENNA_ID") == antenna_ ) ) ;
|
---|
| 1124 | if ( sctabsel.nrow() == 0 ) {
|
---|
| 1125 | os_ << "No SysCal rows" << LogIO::POST ;
|
---|
| 1126 | return ;
|
---|
| 1127 | }
|
---|
| 1128 | ROArrayColumn<Float> tmpTcalCol( sctabsel, "TCAL" ) ;
|
---|
| 1129 | uInt npol = tmpTcalCol.shape( 0 )(0) ;
|
---|
| 1130 | //os_ << "fillTcal(): npol = " << npol << LogIO::POST ;
|
---|
| 1131 | Table tab = table_->tcal().table() ;
|
---|
| 1132 | ScalarColumn<uInt> idCol( tab, "ID" ) ;
|
---|
| 1133 | ScalarColumn<String> timeCol( tab, "TIME" ) ;
|
---|
| 1134 | ArrayColumn<Float> tcalCol( tab, "TCAL" ) ;
|
---|
| 1135 | uInt oldnr = 0 ;
|
---|
| 1136 | uInt newnr = 0 ;
|
---|
| 1137 | TableIterator iter0( sctabsel, "FEED_ID" ) ;
|
---|
| 1138 | // Record for TCAL_ID
|
---|
| 1139 | // "FIELD0": "SPW0": Vector<uInt>
|
---|
| 1140 | // "SPW1": Vector<uInt>
|
---|
| 1141 | // ...
|
---|
| 1142 | while( !iter0.pastEnd() ) {
|
---|
| 1143 | MSSysCal t0( iter0.table() ) ;
|
---|
| 1144 | ROScalarColumn<Int> feedIdCol( t0, "FEED_ID" ) ;
|
---|
| 1145 | Int feedId = feedIdCol( 0 ) ;
|
---|
| 1146 | String ffield = "FEED" + String::toString( feedId ) ;
|
---|
| 1147 | Record rec ;
|
---|
| 1148 | TableIterator iter1( t0, "SPECTRAL_WINDOW_ID" ) ;
|
---|
| 1149 | while( !iter1.pastEnd() ) {
|
---|
| 1150 | MSSysCal t1( iter1.table().sort("TIME") ) ;
|
---|
| 1151 | uInt nrow = t1.nrow() ;
|
---|
| 1152 | ROMSSysCalColumns scCols( t1 ) ;
|
---|
| 1153 | Int spwId = scCols.spectralWindowId()(0) ;
|
---|
| 1154 | String spwfield = "SPW" + String::toString( spwId ) ;
|
---|
| 1155 | ROScalarQuantColumn<Double> scTimeCol = scCols.timeQuant() ;
|
---|
| 1156 | ROArrayColumn<Float> scTcalCol ;
|
---|
| 1157 | IPosition newShape( 2, 1, nrow ) ;
|
---|
| 1158 | if ( isSp ) {
|
---|
| 1159 | scTcalCol.reference( scCols.tcalSpectrum() ) ;
|
---|
| 1160 | newShape[0] = scTcalCol.shape(0)(1) ;
|
---|
| 1161 | }
|
---|
| 1162 | else {
|
---|
| 1163 | scTcalCol.reference( scCols.tcal() ) ;
|
---|
| 1164 | }
|
---|
| 1165 | Vector<uInt> idx( nrow ) ;
|
---|
| 1166 | Vector<String> sTime( nrow ) ;
|
---|
| 1167 | for ( uInt irow = 0 ; irow < nrow ; irow++ ) {
|
---|
| 1168 | sTime[irow] = MVTime( scTimeCol(irow) ).string(MVTime::YMD) ;
|
---|
| 1169 | }
|
---|
| 1170 | Vector<uInt> idminmax( 2, oldnr ) ;
|
---|
| 1171 | for ( uInt ipol = 0 ; ipol < npol ; ipol++ ) {
|
---|
| 1172 | tab.addRow( nrow ) ;
|
---|
| 1173 | newnr += nrow ;
|
---|
| 1174 | RefRows rows( oldnr, newnr-1 ) ;
|
---|
| 1175 | indgen( idx, oldnr ) ;
|
---|
| 1176 | idCol.putColumnCells( rows, idx ) ;
|
---|
| 1177 | timeCol.putColumnCells( rows, sTime ) ;
|
---|
| 1178 | Slicer slicer ;
|
---|
| 1179 | if ( isSp ) {
|
---|
| 1180 | Slice paxis( ipol, 1, 1 ) ;
|
---|
| 1181 | Slice caxis( 0, newShape[0], 1 ) ;
|
---|
| 1182 | slicer = Slicer( paxis, caxis ) ;
|
---|
| 1183 | }
|
---|
| 1184 | else {
|
---|
| 1185 | Slice paxis( ipol, 1, 1 ) ;
|
---|
| 1186 | slicer = Slicer( paxis ) ;
|
---|
| 1187 | }
|
---|
| 1188 | Array<Float> subtcal = scTcalCol.getColumn( slicer ).reform( newShape ) ;
|
---|
| 1189 | tcalCol.putColumnCells( rows, subtcal ) ;
|
---|
| 1190 | oldnr += nrow ;
|
---|
| 1191 | }
|
---|
| 1192 | idminmax[1] = newnr - 1 ;
|
---|
| 1193 | rec.define( spwfield, idminmax ) ;
|
---|
| 1194 | iter1++ ;
|
---|
| 1195 | }
|
---|
| 1196 | tcalrec_.defineRecord( ffield, rec ) ;
|
---|
| 1197 | iter0++ ;
|
---|
| 1198 | }
|
---|
| 1199 |
|
---|
| 1200 | //tcalrec_.print( std::cout ) ;
|
---|
| 1201 | }
|
---|
| 1202 |
|
---|
| 1203 | // void MSFiller::fillMolecules()
|
---|
| 1204 | // {
|
---|
| 1205 | // os_ << "MSFiller::fillMolecules()" << LogIO::POST ;
|
---|
| 1206 | // // tentative
|
---|
| 1207 | // Table tab = table_->molecules().table() ;
|
---|
| 1208 | // tab.addRow( 1 ) ;
|
---|
| 1209 | // ScalarColumn<uInt> idCol( tab, "ID" ) ;
|
---|
| 1210 | // idCol.put( 0, 0 ) ;
|
---|
| 1211 | // }
|
---|
| 1212 |
|
---|
| 1213 | // void MSFiller::fillFit()
|
---|
| 1214 | // {
|
---|
| 1215 | // os_ << "MSFiller::fillFit()" << LogIO::POST ;
|
---|
| 1216 | // // tentative
|
---|
| 1217 | // Table tab = table_->fit().table() ;
|
---|
| 1218 | // tab.addRow( 1 ) ;
|
---|
| 1219 | // ScalarColumn<uInt> idCol( tab, "ID" ) ;
|
---|
| 1220 | // idCol.put( 0, 0 ) ;
|
---|
| 1221 | // }
|
---|
| 1222 |
|
---|
| 1223 | // void MSFiller::fillFrequencies()
|
---|
| 1224 | // {
|
---|
| 1225 | // os_ << "MSFiller::fillFrequencies()" << LogIO::POST ;
|
---|
| 1226 | // // tentative
|
---|
| 1227 | // Table tab = table_->frequencies().table() ;
|
---|
| 1228 | // tab.addRow( 1 ) ;
|
---|
| 1229 | // ScalarColumn<uInt> idCol( tab, "ID" ) ;
|
---|
| 1230 | // idCol.put( 0, 0 ) ;
|
---|
| 1231 | // }
|
---|
| 1232 |
|
---|
| 1233 | // void MSFiller::fillHistory()
|
---|
| 1234 | // {
|
---|
| 1235 | // os_ << "MSFiller::fillHistory()" << LogIO::POST ;
|
---|
| 1236 | // // tentative
|
---|
| 1237 | // Table tab = table_->history().table() ;
|
---|
| 1238 | // tab.addRow( 1 ) ;
|
---|
| 1239 | // ScalarColumn<uInt> idCol( tab, "ID" ) ;
|
---|
| 1240 | // idCol.put( 0, 0 ) ;
|
---|
| 1241 | // }
|
---|
| 1242 |
|
---|
| 1243 | uInt MSFiller::getWeatherId( uInt idx, Double wtime )
|
---|
| 1244 | {
|
---|
| 1245 | uInt nrow = mwTime_.size() ;
|
---|
| 1246 | if ( nrow == 0 )
|
---|
| 1247 | return 0 ;
|
---|
| 1248 | uInt wid = nrow ;
|
---|
| 1249 | for ( uInt i = idx ; i < nrow-1 ; i++ ) {
|
---|
| 1250 | Double tStart = mwTime_[i]-0.5*mwInterval_[i] ;
|
---|
| 1251 | // use of INTERVAL column is problematic
|
---|
| 1252 | // since there are "blank" time of weather monitoring
|
---|
| 1253 | //Double tEnd = tStart + mwInterval_[i] ;
|
---|
| 1254 | Double tEnd = mwTime_[i+1]-0.5*mwInterval_[i+1] ;
|
---|
| 1255 | //os_ << "tStart = " << tStart << " dtEnd = " << tEnd-tStart << " dwtime = " << wtime-tStart << LogIO::POST ;
|
---|
| 1256 | if ( wtime >= tStart && wtime <= tEnd ) {
|
---|
| 1257 | wid = i ;
|
---|
| 1258 | break ;
|
---|
| 1259 | }
|
---|
| 1260 | }
|
---|
| 1261 | if ( wid == nrow ) {
|
---|
| 1262 | uInt i = nrow - 1 ;
|
---|
| 1263 | Double tStart = mwTime_[i-1]+0.5*mwInterval_[i-1] ;
|
---|
| 1264 | Double tEnd = mwTime_[i]+0.5*mwInterval_[i] ;
|
---|
| 1265 | //os_ << "tStart = " << tStart << " dtEnd = " << tEnd-tStart << " dwtime = " << wtime-tStart << LogIO::POST ;
|
---|
| 1266 | if ( wtime >= tStart && wtime <= tEnd )
|
---|
| 1267 | wid = i ;
|
---|
| 1268 | }
|
---|
| 1269 |
|
---|
| 1270 | //if ( wid == nrow )
|
---|
| 1271 | //os_ << LogIO::WARN << "Couldn't find correct WEATHER_ID for time " << wtime << LogIO::POST ;
|
---|
| 1272 |
|
---|
| 1273 | return wid ;
|
---|
| 1274 | }
|
---|
| 1275 |
|
---|
| 1276 | Vector<Double> MSFiller::getSysCalTime( MSSysCal &tab, MEpoch::ROScalarColumn &tcol )
|
---|
| 1277 | {
|
---|
| 1278 | uInt nrow = tcol.table().nrow() ;
|
---|
| 1279 | Vector<Double> tstr( nrow, -1.0 ) ;
|
---|
| 1280 | if ( tab.nrow() == 0 )
|
---|
| 1281 | return tstr ;
|
---|
| 1282 | uInt scnrow = tab.nrow() ;
|
---|
| 1283 | ROMSSysCalColumns sysCalCols( tab ) ;
|
---|
| 1284 | ROScalarMeasColumn<MEpoch> scTimeCol = sysCalCols.timeMeas() ;
|
---|
| 1285 | ROScalarQuantColumn<Double> scIntervalCol = sysCalCols.intervalQuant() ;
|
---|
| 1286 | uInt idx = 0 ;
|
---|
| 1287 | const Double half = 0.5e0 ;
|
---|
| 1288 | for ( uInt i = 0 ; i < nrow ; i++ ) {
|
---|
| 1289 | Double t = tcol( i ).get( "s" ).getValue() ;
|
---|
| 1290 | for ( uInt j = idx ; j < scnrow-1 ; j++ ) {
|
---|
| 1291 | Double tsc1 = scTimeCol( j ).get( "s" ).getValue() ;
|
---|
| 1292 | Double dt1 = scIntervalCol( j ).getValue("s") ;
|
---|
| 1293 | Double tsc2 = scTimeCol( j+1 ).get( "s" ).getValue() ;
|
---|
| 1294 | Double dt2 = scIntervalCol( j+1 ).getValue("s") ;
|
---|
| 1295 | if ( t > tsc1-half*dt1 && t <= tsc2-half*dt2 ) {
|
---|
| 1296 | tstr[i] = tsc1 ;
|
---|
| 1297 | idx = j ;
|
---|
| 1298 | break ;
|
---|
| 1299 | }
|
---|
| 1300 | }
|
---|
| 1301 | if ( tstr[i] == -1.0 ) {
|
---|
| 1302 | Double tsc = scTimeCol( scnrow-1 ).get( "s" ).getValue() ;
|
---|
| 1303 | Double dt = scIntervalCol( scnrow-1 ).getValue( "s" ) ;
|
---|
| 1304 | if ( t <= tsc+0.5*dt )
|
---|
| 1305 | tstr[i] = tsc ;
|
---|
| 1306 | }
|
---|
| 1307 | }
|
---|
| 1308 | return tstr ;
|
---|
| 1309 | }
|
---|
| 1310 |
|
---|
| 1311 | uInt MSFiller::getTsys( uInt idx, Array<Float> &tsys, MSSysCal &tab, Double t )
|
---|
| 1312 | {
|
---|
| 1313 | uInt nrow = tab.nrow() ;
|
---|
| 1314 | if ( nrow == 0 ) {
|
---|
| 1315 | os_ << "No SysCal rows" << LogIO::POST ;
|
---|
| 1316 | tsys.resize( IPosition(0) ) ;
|
---|
| 1317 | return 0 ;
|
---|
| 1318 | }
|
---|
| 1319 | Bool isSp = tab.tableDesc().isColumn( "TSYS_SPECTRUM" ) ;
|
---|
| 1320 | ROMSSysCalColumns calCols( tab ) ;
|
---|
| 1321 | ROScalarMeasColumn<MEpoch> scTimeCol = calCols.timeMeas() ;
|
---|
| 1322 | ROArrayColumn<Float> mTsysCol ;
|
---|
| 1323 | if ( isSp ) {
|
---|
| 1324 | mTsysCol.reference( calCols.tsysSpectrum() ) ;
|
---|
| 1325 | }
|
---|
| 1326 | else {
|
---|
| 1327 | mTsysCol.reference( calCols.tsys() ) ;
|
---|
| 1328 | }
|
---|
| 1329 | for ( uInt i = idx ; i < nrow ; i++ ) {
|
---|
| 1330 | Double tref = scTimeCol( i ).get( "s" ).getValue() ;
|
---|
| 1331 | if ( t == tref ) {
|
---|
| 1332 | tsys.reference( mTsysCol( i ) ) ;
|
---|
| 1333 | idx = i ;
|
---|
| 1334 | break ;
|
---|
| 1335 | }
|
---|
| 1336 | }
|
---|
| 1337 | return idx ;
|
---|
| 1338 | }
|
---|
| 1339 |
|
---|
| 1340 | Vector<uInt> MSFiller::getTcalId( Int fid, Int spwid, Double t )
|
---|
| 1341 | {
|
---|
| 1342 | String feed = "FEED" + String::toString(fid) ;
|
---|
| 1343 | String spw = "SPW" + String::toString(spwid) ;
|
---|
| 1344 | String sctime = MVTime( Quantum<Double>(t,"s") ).string(MVTime::YMD) ;
|
---|
| 1345 | Table ttab = table_->tcal().table() ;
|
---|
| 1346 | if ( ttab.nrow() == 0 ) {
|
---|
| 1347 | os_ << "No TCAL rows" << LogIO::POST ;
|
---|
| 1348 | Vector<uInt> tcalids( 0 ) ;
|
---|
| 1349 | return tcalids ;
|
---|
| 1350 | }
|
---|
| 1351 | Vector<uInt> ids = tcalrec_.asRecord(feed).asArrayuInt(spw) ;
|
---|
| 1352 | Table ttabsel = ttab( ttab.col("TIME") == sctime && ttab.col("ID") >= ids[0] && ttab.col("ID") <= ids[1] ).sort("ID") ;
|
---|
| 1353 | uInt nrow = ttabsel.nrow() ;
|
---|
| 1354 | Vector<uInt> tcalids( nrow ) ;
|
---|
| 1355 | if ( nrow == 0 ) {
|
---|
| 1356 | os_ << "No TCAL rows" << LogIO::POST ;
|
---|
| 1357 | return tcalids ;
|
---|
| 1358 | }
|
---|
| 1359 | ROScalarColumn<uInt> idCol( ttabsel, "ID" ) ;
|
---|
| 1360 | tcalids[0] = idCol(0) ;
|
---|
| 1361 | if ( nrow == 2 ) {
|
---|
| 1362 | tcalids[1] = idCol(1) ;
|
---|
| 1363 | }
|
---|
| 1364 | else if ( nrow == 3 ) {
|
---|
| 1365 | tcalids[1] = idCol(2) ;
|
---|
| 1366 | tcalids[2] = idCol(1) ;
|
---|
| 1367 | }
|
---|
| 1368 | else if ( nrow == 4 ) {
|
---|
| 1369 | tcalids[1] = idCol(3) ;
|
---|
| 1370 | tcalids[2] = idCol(1) ;
|
---|
| 1371 | tcalids[3] = idCol(2) ;
|
---|
| 1372 | }
|
---|
| 1373 |
|
---|
| 1374 | return tcalids ;
|
---|
| 1375 | }
|
---|
| 1376 |
|
---|
| 1377 | uInt MSFiller::getDirection( uInt idx, Vector<Double> &dir, Vector<Double> &srate, String &ref, ROMSPointingColumns &cols, Double t )
|
---|
| 1378 | {
|
---|
| 1379 | // assume that cols is sorted by TIME
|
---|
| 1380 | Bool doInterp = False ;
|
---|
| 1381 | uInt nrow = cols.nrow() ;
|
---|
| 1382 | if ( nrow == 0 )
|
---|
| 1383 | return 0 ;
|
---|
| 1384 | ROScalarMeasColumn<MEpoch> tcol = cols.timeMeas() ;
|
---|
| 1385 | ROArrayMeasColumn<MDirection> dmcol = cols.directionMeasCol() ;
|
---|
| 1386 | ROArrayColumn<Double> dcol = cols.direction() ;
|
---|
| 1387 | // ensure that tcol(idx) < t
|
---|
| 1388 | //os_ << "tcol(idx) = " << tcol(idx).get("s").getValue() << " t = " << t << " diff = " << tcol(idx).get("s").getValue()-t << endl ;
|
---|
| 1389 | while ( tcol(idx).get("s").getValue() > t && idx > 0 )
|
---|
| 1390 | idx-- ;
|
---|
| 1391 | //os_ << "idx = " << idx << LogIO::POST ;
|
---|
| 1392 |
|
---|
| 1393 | // index search
|
---|
| 1394 | for ( uInt i = idx ; i < nrow ; i++ ) {
|
---|
| 1395 | Double tref = tcol( i ).get( "s" ).getValue() ;
|
---|
| 1396 | if ( tref == t ) {
|
---|
| 1397 | idx = i ;
|
---|
| 1398 | break ;
|
---|
| 1399 | }
|
---|
| 1400 | else if ( tref > t ) {
|
---|
| 1401 | if ( i == 0 ) {
|
---|
| 1402 | idx = i ;
|
---|
| 1403 | }
|
---|
| 1404 | else {
|
---|
| 1405 | idx = i-1 ;
|
---|
| 1406 | doInterp = True ;
|
---|
| 1407 | }
|
---|
| 1408 | break ;
|
---|
| 1409 | }
|
---|
| 1410 | else {
|
---|
| 1411 | idx = nrow - 1 ;
|
---|
| 1412 | }
|
---|
| 1413 | }
|
---|
| 1414 | //os_ << "searched idx = " << idx << LogIO::POST ;
|
---|
| 1415 |
|
---|
| 1416 | Slice ds( 0, 2, 1 ) ;
|
---|
| 1417 | Slice ds0( 0, 1, 1 ) ;
|
---|
| 1418 | Slice ds1( 1, 1, 1 ) ;
|
---|
| 1419 | Slicer dslice0( ds, ds0 ) ;
|
---|
| 1420 | Slicer dslice1( ds, ds1 ) ;
|
---|
| 1421 | //os_ << "dmcol(idx).shape() = " << dmcol(idx).shape() << LogIO::POST ;
|
---|
| 1422 | IPosition ip( dmcol(idx).shape().nelements(), 0 ) ;
|
---|
| 1423 | //os_ << "ip = " << ip << LogIO::POST ;
|
---|
| 1424 | ref = dmcol(idx)(ip).getRefString() ;
|
---|
| 1425 | //os_ << "ref = " << ref << LogIO::POST ;
|
---|
| 1426 | IPosition outp(1,2) ;
|
---|
| 1427 | if ( doInterp ) {
|
---|
| 1428 | //os_ << "do interpolation" << LogIO::POST ;
|
---|
| 1429 | //os_ << "dcol(idx).shape() = " << dcol(idx).shape() << LogIO::POST ;
|
---|
| 1430 | Double tref0 = tcol(idx).get("s").getValue() ;
|
---|
| 1431 | Double tref1 = tcol(idx+1).get("s").getValue() ;
|
---|
| 1432 | Vector<Double> dir0 = dcol(idx)(dslice0).reform(outp) ;
|
---|
| 1433 | //os_ << "dir0 = " << dir0 << LogIO::POST ;
|
---|
| 1434 | Vector<Double> dir1 = dcol(idx+1)(dslice0).reform(outp) ;
|
---|
| 1435 | //os_ << "dir1 = " << dir1 << LogIO::POST ;
|
---|
| 1436 | Double dt0 = t - tref0 ;
|
---|
| 1437 | Double dt1 = tref1 - t ;
|
---|
| 1438 | dir.reference( (dt0*dir1+dt1*dir0)/(dt0+dt1) ) ;
|
---|
| 1439 | if ( dcol(idx).shape()(1) > 1 ) {
|
---|
| 1440 | if ( dt0 >= dt1 ) {
|
---|
| 1441 | srate.reference( dcol(idx)(dslice1).reform(outp) ) ;
|
---|
| 1442 | }
|
---|
| 1443 | else {
|
---|
| 1444 | srate.reference( dcol(idx+1)(dslice1) ) ;
|
---|
| 1445 | }
|
---|
| 1446 | }
|
---|
| 1447 | //os_ << "dir = " << dir << LogIO::POST ;
|
---|
| 1448 | }
|
---|
| 1449 | else {
|
---|
| 1450 | //os_ << "no interpolation" << LogIO::POST ;
|
---|
| 1451 | dir.reference( dcol(idx)(dslice0).reform(outp) ) ;
|
---|
| 1452 | if ( dcol(idx).shape()(1) > 1 ) {
|
---|
| 1453 | srate.reference( dcol(idx)(dslice1).reform(outp) ) ;
|
---|
| 1454 | }
|
---|
| 1455 | }
|
---|
| 1456 |
|
---|
| 1457 | return idx ;
|
---|
| 1458 | }
|
---|
| 1459 |
|
---|
| 1460 | } ;
|
---|
| 1461 |
|
---|