[1778] | 1 | //
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| 2 | // C++ Interface: FillerBase
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| 3 | //
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| 4 | // Description:
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| 5 | //
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| 6 | //
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| 7 | // Author: Malte Marquarding <asap@atnf.csiro.au>, (C) 2010
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| 8 | //
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| 9 | // Copyright: See COPYING file that comes with this distribution
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| 10 | //
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| 11 | //
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| 12 |
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[1780] | 13 | #include <casa/Containers/RecordField.h>
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[2209] | 14 | #include <tables/Tables/ExprNode.h>
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[1778] | 15 |
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[1780] | 16 | #include "FillerBase.h"
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| 17 |
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[1778] | 18 | using namespace casa;
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| 19 |
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[1786] | 20 | namespace asap {
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| 21 |
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| 22 | FillerBase::FillerBase(casa::CountedPtr<Scantable> stable) :
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| 23 | table_(stable)
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[1778] | 24 | {
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[1795] | 25 | row_ = TableRow(table_->table());
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[2230] | 26 |
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| 27 | // FIT_ID is -1 by default
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| 28 | RecordFieldPtr<Int> fitIdCol( row_.record(), "FIT_ID" ) ;
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| 29 | *fitIdCol = -1 ;
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[2289] | 30 |
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| 31 | mEntry_.resize( 0 ) ;
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| 32 | mIdx_.resize( 0 ) ;
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| 33 | fEntry_.resize( 0 ) ;
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| 34 | fIdx_.resize( 0 ) ;
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| 35 | wEntry_.resize( 0 ) ;
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| 36 | wIdx_.resize( 0 ) ;
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[1778] | 37 | }
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| 38 |
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[1793] | 39 | void FillerBase::setHeader(const STHeader& header)
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| 40 | {
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| 41 | table_->setHeader(header);
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| 42 | }
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| 43 |
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[1778] | 44 | void FillerBase::setSpectrum(const Vector<Float>& spectrum,
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[1788] | 45 | const Vector<uChar>& flags,
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| 46 | const Vector<Float>& tsys)
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[1778] | 47 | {
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| 48 | RecordFieldPtr< Array<Float> > specCol(row_.record(), "SPECTRA");
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| 49 | RecordFieldPtr< Array<uChar> > flagCol(row_.record(), "FLAGTRA");
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[1788] | 50 | RecordFieldPtr< Array<Float> > tsysCol(row_.record(), "TSYS");
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| 51 |
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[1876] | 52 | //*specCol = spectrum;
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| 53 | //*flagCol = flags;
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| 54 | //*tsysCol = tsys;
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| 55 | specCol.define(spectrum);
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| 56 | flagCol.define(flags);
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| 57 | tsysCol.define(tsys);
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[1778] | 58 | }
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| 59 |
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[1803] | 60 | void FillerBase::setFlagrow(uInt flag)
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| 61 | {
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| 62 | RecordFieldPtr<uInt> flagrowCol(row_.record(), "FLAGROW");
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| 63 | *flagrowCol = flag;
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| 64 | }
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[1788] | 65 |
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| 66 | void FillerBase::setOpacity(Float opacity)
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| 67 | {
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| 68 | RecordFieldPtr<Float> tauCol(row_.record(), "OPACITY") ;
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| 69 | *tauCol = opacity ;
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| 70 | }
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| 71 |
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[1778] | 72 | void FillerBase::setIndex(uInt scanno, uInt cycleno, uInt ifno, uInt polno,
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| 73 | uInt beamno)
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| 74 | {
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| 75 | RecordFieldPtr<uInt> beamCol(row_.record(), "BEAMNO");
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| 76 | RecordFieldPtr<uInt> ifCol(row_.record(), "IFNO");
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| 77 | RecordFieldPtr<uInt> polCol(row_.record(), "POLNO");
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| 78 | RecordFieldPtr<uInt> cycleCol(row_.record(), "CYCLENO");
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[1780] | 79 | RecordFieldPtr<uInt> scanCol(row_.record(), "SCANNO");
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[1778] | 80 | *beamCol = beamno;
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| 81 | *cycleCol = cycleno;
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| 82 | *ifCol = ifno;
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| 83 | *polCol = polno;
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| 84 | *scanCol = scanno;
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| 85 | }
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| 86 |
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| 87 | void FillerBase::setFrequency(Double refpix, Double refval,
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[1780] | 88 | Double incr)
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[1778] | 89 | {
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| 90 | /// @todo this has to change when nchan isn't global anymore
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[2289] | 91 | uInt nEntry = fEntry_.size() ;
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| 92 | Int idx = -1 ;
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| 93 | Vector<Double> entry( 3 ) ;
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| 94 | entry[0] = refpix ;
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| 95 | entry[1] = refval ;
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| 96 | entry[2] = incr ;
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| 97 | for ( uInt i = 0 ; i < nEntry ; i++ ) {
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| 98 | if ( allEQ( entry, fEntry_[i] ) ) {
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| 99 | idx = i ;
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| 100 | break ;
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| 101 | }
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| 102 | }
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| 103 | uInt id ;
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| 104 | if ( idx != -1 )
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| 105 | id = fIdx_[idx] ;
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| 106 | else {
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| 107 | id= table_->frequencies().addEntry(refpix, refval, incr);
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| 108 | RecordFieldPtr<uInt> mfreqidCol(row_.record(), "FREQ_ID");
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| 109 | fEntry_.push_back( entry ) ;
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| 110 | fIdx_.push_back( id ) ;
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| 111 | }
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[1778] | 112 | RecordFieldPtr<uInt> mfreqidCol(row_.record(), "FREQ_ID");
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| 113 | *mfreqidCol = id;
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| 114 |
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| 115 | }
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| 116 |
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| 117 |
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[1780] | 118 | void FillerBase::setMolecule(const Vector<Double>& restfreq)
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[1778] | 119 | {
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[2289] | 120 | uInt nEntry = mEntry_.size() ;
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| 121 | Int idx = -1 ;
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| 122 | for ( uInt i = 0 ; i < nEntry ; i++ ) {
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[2430] | 123 | if ( restfreq.conform( mEntry_[i] ) &&
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| 124 | allEQ( restfreq, mEntry_[i] ) ) {
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| 125 | idx = i ;
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| 126 | break ;
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[2289] | 127 | }
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| 128 | }
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| 129 | uInt id ;
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| 130 | if ( idx != -1 )
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| 131 | id = mIdx_[idx] ;
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| 132 | else {
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| 133 | Vector<String> tmp ;
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| 134 | id = table_->molecules().addEntry(restfreq,tmp,tmp) ;
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[2430] | 135 | mEntry_.push_back( restfreq.copy() ) ;
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[2289] | 136 | mIdx_.push_back( id ) ;
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| 137 | }
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[1778] | 138 | RecordFieldPtr<uInt> molidCol(row_.record(), "MOLECULE_ID");
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| 139 | *molidCol = id;
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| 140 | }
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| 141 |
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[1780] | 142 | void FillerBase::setDirection(const Vector<Double>& dir,
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[1778] | 143 | Float az, Float el)
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| 144 | {
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| 145 | RecordFieldPtr<Array<Double> > dirCol(row_.record(), "DIRECTION");
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| 146 | *dirCol = dir;
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| 147 | RecordFieldPtr<Float> azCol(row_.record(), "AZIMUTH");
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| 148 | *azCol = az;
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| 149 | RecordFieldPtr<Float> elCol(row_.record(), "ELEVATION");
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| 150 | *elCol = el;
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| 151 | }
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| 152 |
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| 153 | void FillerBase::setFocus(Float pa, Float faxis,
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| 154 | Float ftan, Float frot)
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| 155 | {
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| 156 | RecordFieldPtr<uInt> mfocusidCol(row_.record(), "FOCUS_ID");
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| 157 | uInt id = table_->focus().addEntry(pa, faxis, ftan, frot);
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| 158 | *mfocusidCol = id;
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| 159 | }
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| 160 |
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[1809] | 161 | void FillerBase::setTime(Double mjd, Double interval)
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[1778] | 162 | {
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| 163 | RecordFieldPtr<Double> mjdCol(row_.record(), "TIME");
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| 164 | *mjdCol = mjd;
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| 165 | RecordFieldPtr<Double> intCol(row_.record(), "INTERVAL");
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| 166 | *intCol = interval;
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| 167 |
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| 168 | }
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| 169 |
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| 170 | void FillerBase::setWeather(Float temperature, Float pressure,
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| 171 | Float humidity,
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| 172 | Float windspeed, Float windaz)
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| 173 | {
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[2289] | 174 | uInt nEntry = wEntry_.size() ;
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| 175 | Int idx = -1 ;
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| 176 | Vector<Float> entry( 5 ) ;
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| 177 | entry[0] = temperature ;
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| 178 | entry[1] = pressure ;
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| 179 | entry[2] = humidity ;
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| 180 | entry[3] = windspeed ;
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| 181 | entry[4] = windaz ;
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| 182 | for ( uInt i = 0 ; i < nEntry ; i++ ) {
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| 183 | if ( allEQ( entry, wEntry_[i] ) ) {
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| 184 | idx = i ;
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| 185 | break ;
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| 186 | }
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| 187 | }
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| 188 | uInt id ;
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| 189 | if ( idx != -1 )
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| 190 | id = wIdx_[idx] ;
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| 191 | else {
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| 192 | id = table_->weather().addEntry(temperature, pressure,
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| 193 | humidity, windspeed, windaz);
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| 194 | wEntry_.push_back( entry ) ;
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| 195 | wIdx_.push_back( id ) ;
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| 196 | }
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| 197 | RecordFieldPtr<uInt> mweatheridCol(row_.record(), "WEATHER_ID");
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| 198 | *mweatheridCol = id;
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[1778] | 199 | }
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| 200 |
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| 201 | void FillerBase::setTcal(const String& tcaltime,
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| 202 | const Vector<Float>& tcal)
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| 203 | {
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| 204 | uInt id = table_->tcal().addEntry(tcaltime, tcal);
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| 205 | RecordFieldPtr<uInt> mcalidCol(row_.record(), "TCAL_ID");
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| 206 | *mcalidCol = id;
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| 207 | }
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| 208 |
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| 209 | void FillerBase::setScanRate(const Vector<Double>& srate)
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| 210 | {
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| 211 | RecordFieldPtr<Array<Double> > srateCol(row_.record(), "SCANRATE");
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| 212 | *srateCol = srate;
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| 213 | }
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| 214 |
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| 215 | void FillerBase::setReferenceBeam(Int beamno)
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| 216 | {
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| 217 | RecordFieldPtr<Int> rbCol(row_.record(), "REFBEAMNO");
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| 218 | *rbCol = beamno;
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| 219 | }
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| 220 |
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| 221 | void FillerBase::setSource(const std::string& name, Int type,
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| 222 | const std::string& fieldname,
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| 223 | const Vector<Double>& dir,
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| 224 | const Vector<Double>& propermot,
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[1780] | 225 | Double velocity)
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[1778] | 226 | {
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| 227 | RecordFieldPtr<String> srcnCol(row_.record(), "SRCNAME");
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[1780] | 228 | *srcnCol = name;
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[1778] | 229 | RecordFieldPtr<Int> srctCol(row_.record(), "SRCTYPE");
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| 230 | *srctCol = type;
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| 231 | RecordFieldPtr<String> fieldnCol(row_.record(), "FIELDNAME");
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| 232 | *fieldnCol = fieldname;
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| 233 | RecordFieldPtr<Array<Double> > spmCol(row_.record(), "SRCPROPERMOTION");
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[1780] | 234 | *spmCol = propermot;
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[1778] | 235 | RecordFieldPtr<Array<Double> > sdirCol(row_.record(), "SRCDIRECTION");
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[1780] | 236 | *sdirCol = dir;
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[1778] | 237 | RecordFieldPtr<Double> svelCol(row_.record(), "SRCVELOCITY");
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[1780] | 238 | *svelCol = velocity;
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[1778] | 239 | }
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| 240 |
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| 241 | void FillerBase::commitRow()
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| 242 | {
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| 243 | table_->table().addRow();
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| 244 | row_.put(table_->table().nrow()-1);
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| 245 | }
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| 246 |
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[2209] | 247 | void FillerBase::setWeather2(Float temperature,
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| 248 | Float pressure,
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| 249 | Float humidity,
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| 250 | Float windspeed,
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| 251 | Float windaz)
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| 252 | {
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[2289] | 253 | uInt nEntry = wEntry_.size() ;
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| 254 | Int idx = -1 ;
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| 255 | Vector<Float> entry( 5 ) ;
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| 256 | entry[0] = temperature ;
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| 257 | entry[1] = pressure ;
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| 258 | entry[2] = humidity ;
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| 259 | entry[3] = windspeed ;
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| 260 | entry[4] = windaz ;
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| 261 | for ( uInt i = 0 ; i < nEntry ; i++ ) {
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| 262 | if ( allEQ( entry, wEntry_[i] ) ) {
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| 263 | idx = i ;
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| 264 | break ;
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| 265 | }
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| 266 | }
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[2209] | 267 | uInt id ;
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[2289] | 268 | if ( idx != -1 )
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| 269 | id = wIdx_[idx] ;
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[2209] | 270 | else {
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[2289] | 271 | Table tab = table_->weather().table() ;
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| 272 | Table subt = tab( tab.col("TEMPERATURE") == temperature \
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| 273 | && tab.col("PRESSURE") == pressure \
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| 274 | && tab.col("HUMIDITY") == humidity \
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| 275 | && tab.col("WINDSPEED") == windspeed \
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| 276 | && tab.col("WINDAZ") == windaz, 1 ) ;
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| 277 | Int nrow = tab.nrow() ;
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| 278 | Int nrowSel = subt.nrow() ;
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| 279 | if ( nrowSel == 0 ) {
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| 280 | tab.addRow( 1, True ) ;
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| 281 | TableRow row( tab ) ;
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| 282 | TableRecord &rec = row.record() ;
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| 283 | RecordFieldPtr<casa::uInt> rfpi ;
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| 284 | rfpi.attachToRecord( rec, "ID" ) ;
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| 285 | *rfpi = (uInt)nrow ;
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| 286 | RecordFieldPtr<casa::Float> rfp ;
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| 287 | rfp.attachToRecord( rec, "TEMPERATURE" ) ;
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| 288 | *rfp = temperature ;
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| 289 | rfp.attachToRecord( rec, "PRESSURE" ) ;
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| 290 | *rfp = pressure ;
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| 291 | rfp.attachToRecord( rec, "HUMIDITY" ) ;
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| 292 | *rfp = humidity ;
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| 293 | rfp.attachToRecord( rec, "WINDSPEED" ) ;
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| 294 | *rfp = windspeed ;
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| 295 | rfp.attachToRecord( rec, "WINDAZ" ) ;
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| 296 | *rfp = windaz ;
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| 297 | row.put( nrow, rec ) ;
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| 298 | id = (uInt)nrow ;
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| 299 | }
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| 300 | else {
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| 301 | ROTableColumn tc( subt, "ID" ) ;
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| 302 | id = tc.asuInt( 0 ) ;
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| 303 | }
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| 304 | wEntry_.push_back( entry ) ;
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| 305 | wIdx_.push_back( id ) ;
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[2209] | 306 | }
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| 307 | RecordFieldPtr<uInt> mweatheridCol(row_.record(), "WEATHER_ID");
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| 308 | *mweatheridCol = id;
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| 309 | }
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| 310 |
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| 311 | void FillerBase::setTcal2(const String& tcaltime,
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| 312 | const Vector<Float>& tcal)
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| 313 | {
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[2242] | 314 | uInt id = 0 ;
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[2209] | 315 | Table tab = table_->tcal().table() ;
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[2242] | 316 | Table result =
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| 317 | //tab( nelements(tab.col("TCAL")) == uInt (tcal.size()) &&
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| 318 | // all(tab.col("TCAL")== tcal) &&
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| 319 | // tab.col("TIME") == tcaltime, 1 ) ;
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| 320 | tab( nelements(tab.col("TCAL")) == uInt (tcal.size()) &&
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| 321 | all(tab.col("TCAL")== tcal), 1 ) ;
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[2209] | 322 |
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[2242] | 323 | if ( result.nrow() > 0 ) {
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| 324 | ROTableColumn tmpCol( result, "ID" ) ;
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| 325 | tmpCol.getScalar( 0, id ) ;
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[2209] | 326 | }
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| 327 | else {
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[2242] | 328 | uInt rno = tab.nrow();
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| 329 | tab.addRow();
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| 330 | TableColumn idCol( tab, "ID" ) ;
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| 331 | TableColumn tctimeCol( tab, "TIME" ) ;
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| 332 | ArrayColumn<Float> tcalCol( tab, "TCAL" ) ;
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| 333 | // get last assigned _id and increment
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| 334 | if ( rno > 0 ) {
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| 335 | idCol.getScalar(rno-1, id);
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| 336 | id++;
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[2209] | 337 | }
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[2242] | 338 | tctimeCol.putScalar(rno, tcaltime);
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| 339 | tcalCol.put(rno, tcal);
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| 340 | idCol.putScalar(rno, id);
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| 341 | }
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[2209] | 342 |
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| 343 | RecordFieldPtr<uInt> mcalidCol(row_.record(), "TCAL_ID");
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| 344 | *mcalidCol = id;
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| 345 | }
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| 346 |
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[1778] | 347 | };
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