source: trunk/python/asaplotbase.py@ 1069

Last change on this file since 1069 was 1032, checked in by mar637, 19 years ago

Fix for Ticket #32; re-introduced mpl version dependency

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Line 
1"""
2ASAP plotting class based on matplotlib.
3"""
4
5import sys
6from re import match
7
8import matplotlib
9
10from matplotlib.figure import Figure, Text
11from matplotlib.font_manager import FontProperties
12from matplotlib.numerix import sqrt
13from matplotlib import rc, rcParams
14from asap import rcParams as asaprcParams
15from matplotlib.ticker import ScalarFormatter
16from matplotlib.ticker import NullLocator
17
18class MyFormatter(ScalarFormatter):
19 def __call__(self, x, pos=None):
20 #last = len(self.locs)-2
21 if pos==0:
22 return ''
23 else: return ScalarFormatter.__call__(self, x, pos)
24
25class asaplotbase:
26 """
27 ASAP plotting base class based on matplotlib.
28 """
29
30 def __init__(self, rows=1, cols=0, title='', size=(8,6), buffering=False):
31 """
32 Create a new instance of the ASAPlot plotting class.
33
34 If rows < 1 then a separate call to set_panels() is required to define
35 the panel layout; refer to the doctext for set_panels().
36 """
37 self.is_dead = False
38 self.figure = Figure(figsize=size, facecolor='#ddddee')
39 self.canvas = None
40
41 self.set_title(title)
42 self.subplots = []
43 if rows > 0:
44 self.set_panels(rows, cols)
45
46 # Set matplotlib default colour sequence.
47 self.colormap = "green red black cyan magenta orange blue purple yellow pink".split()
48
49 c = asaprcParams['plotter.colours']
50 if isinstance(c,str) and len(c) > 0:
51 self.colormap = c.split()
52
53 self.lsalias = {"line": [1,0],
54 "dashdot": [4,2,1,2],
55 "dashed" : [4,2,4,2],
56 "dotted" : [1,2],
57 "dashdotdot": [4,2,1,2,1,2],
58 "dashdashdot": [4,2,4,2,1,2]
59 }
60
61 styles = "line dashed dotted dashdot".split()
62 c = asaprcParams['plotter.linestyles']
63 if isinstance(c,str) and len(c) > 0:
64 styles = c.split()
65 s = []
66 for ls in styles:
67 if self.lsalias.has_key(ls):
68 s.append(self.lsalias.get(ls))
69 else:
70 s.append('-')
71 self.linestyles = s
72
73 self.color = 0;
74 self.linestyle = 0;
75 self.attributes = {}
76 self.loc = 0
77
78 self.buffering = buffering
79
80 def clear(self):
81 """
82 Delete all lines from the plot. Line numbering will restart from 1.
83 """
84
85 for i in range(len(self.lines)):
86 self.delete(i)
87 self.axes.clear()
88 self.color = 0
89 self.lines = []
90
91 def palette(self, color, colormap=None, linestyle=0, linestyles=None):
92 if colormap:
93 if isinstance(colormap,list):
94 self.colormap = colormap
95 elif isinstance(colormap,str):
96 self.colormap = colormap.split()
97 if 0 <= color < len(self.colormap):
98 self.color = color
99 if linestyles:
100 self.linestyles = []
101 if isinstance(linestyles,list):
102 styles = linestyles
103 elif isinstance(linestyles,str):
104 styles = linestyles.split()
105 for ls in styles:
106 if self.lsalias.has_key(ls):
107 self.linestyles.append(self.lsalias.get(ls))
108 else:
109 self.linestyles.append(self.lsalias.get('line'))
110 if 0 <= linestyle < len(self.linestyles):
111 self.linestyle = linestyle
112
113 def delete(self, numbers=None):
114 """
115 Delete the 0-relative line number, default is to delete the last.
116 The remaining lines are NOT renumbered.
117 """
118
119 if numbers is None: numbers = [len(self.lines)-1]
120
121 if not hasattr(numbers, '__iter__'):
122 numbers = [numbers]
123
124 for number in numbers:
125 if 0 <= number < len(self.lines):
126 if self.lines[number] is not None:
127 for line in self.lines[number]:
128 line.set_linestyle('None')
129 self.lines[number] = None
130 self.show()
131
132 def get_line(self):
133 """
134 Get the current default line attributes.
135 """
136 return self.attributes
137
138
139 def hist(self, x=None, y=None, msk=None, fmt=None, add=None):
140 """
141 Plot a histogram. N.B. the x values refer to the start of the
142 histogram bin.
143
144 fmt is the line style as in plot().
145 """
146
147 if x is None:
148 if y is None: return
149 x = range(len(y))
150
151 if len(x) != len(y):
152 return
153 l2 = 2*len(x)
154 x2 = range(l2)
155 y2 = range(l2)
156 m2 = range(l2)
157
158 for i in range(l2):
159 x2[i] = x[i/2]
160 m2[i] = msk[i/2]
161
162 y2[0] = 0.0
163 for i in range(1,l2):
164 y2[i] = y[(i-1)/2]
165
166 self.plot(x2, y2, m2, fmt, add)
167
168
169 def hold(self, hold=True):
170 """
171 Buffer graphics until subsequently released.
172 """
173 self.buffering = hold
174
175
176 def legend(self, loc=None):
177 """
178 Add a legend to the plot.
179
180 Any other value for loc else disables the legend:
181 1: upper right
182 2: upper left
183 3: lower left
184 4: lower right
185 5: right
186 6: center left
187 7: center right
188 8: lower center
189 9: upper center
190 10: center
191
192 """
193 if isinstance(loc,int):
194 if 0 > loc > 10: loc = 0
195 self.loc = loc
196 self.show()
197
198
199 def plot(self, x=None, y=None, mask=None, fmt=None, add=None):
200 """
201 Plot the next line in the current frame using the current line
202 attributes. The ASAPlot graphics window will be mapped and raised.
203
204 The argument list works a bit like the matlab plot() function.
205 """
206 if x is None:
207 if y is None: return
208 x = range(len(y))
209
210 elif y is None:
211 y = x
212 x = range(len(y))
213
214 ax = self.axes
215 s = ax.title.get_size()
216 tsize = s-(self.cols+self.rows)/2
217 ax.title.set_size(tsize)
218 origx = ax.xaxis.label.get_size() #rcParams['xtick.labelsize']
219 origy = ax.yaxis.label.get_size() #rcParams['ytick.labelsize']
220 if self.cols > 1:
221 xfsize = origx-(self.cols)/2
222 #rc('xtick',labelsize=xfsize)
223 ax.xaxis.label.set_size(xfsize)
224 if self.rows > 1:
225 yfsize = origy-(self.rows)/2
226 #rc('ytick',labelsize=yfsize)
227 ax.yaxis.label.set_size(yfsize)
228 if mask is None:
229 if fmt is None:
230 line = self.axes.plot(x, y)
231 else:
232 line = self.axes.plot(x, y, fmt)
233 else:
234 segments = []
235
236 mask = list(mask)
237 i = 0
238 while mask[i:].count(1):
239 i += mask[i:].index(1)
240 if mask[i:].count(0):
241 j = i + mask[i:].index(0)
242 else:
243 j = len(mask)
244
245 segments.append(x[i:j])
246 segments.append(y[i:j])
247
248 i = j
249
250 line = self.axes.plot(*segments)
251 #rc('xtick',labelsize=origx)
252 #rc('ytick',labelsize=origy)
253
254 # Add to an existing line?
255 if add is None or len(self.lines) < add < 0:
256 # Don't add.
257 self.lines.append(line)
258 i = len(self.lines) - 1
259 else:
260 if add == 0: add = len(self.lines)
261 i = add - 1
262 self.lines[i].extend(line)
263
264 # Set/reset attributes for the line.
265 gotcolour = False
266 for k, v in self.attributes.iteritems():
267 if k == 'color': gotcolour = True
268 for segment in self.lines[i]:
269 getattr(segment, "set_%s"%k)(v)
270
271 if not gotcolour and len(self.colormap):
272 for segment in self.lines[i]:
273 getattr(segment, "set_color")(self.colormap[self.color])
274 if len(self.colormap) == 1:
275 getattr(segment, "set_dashes")(self.linestyles[self.linestyle])
276 self.color += 1
277 if self.color >= len(self.colormap):
278 self.color = 0
279
280 if len(self.colormap) == 1:
281 self.linestyle += 1
282 if self.linestyle >= len(self.linestyles):
283 self.linestyle = 0
284
285 self.show()
286
287
288 def position(self):
289 """
290 Use the mouse to get a position from a graph.
291 """
292
293 def position_disable(event):
294 self.register('button_press', None)
295 print '%.4f, %.4f' % (event.xdata, event.ydata)
296
297 print 'Press any mouse button...'
298 self.register('button_press', position_disable)
299
300
301 def region(self):
302 """
303 Use the mouse to get a rectangular region from a plot.
304
305 The return value is [x0, y0, x1, y1] in world coordinates.
306 """
307
308 def region_start(event):
309 height = self.canvas.figure.bbox.height()
310 self.rect = {'fig': None, 'height': height,
311 'x': event.x, 'y': height - event.y,
312 'world': [event.xdata, event.ydata,
313 event.xdata, event.ydata]}
314 self.register('button_press', None)
315 self.register('motion_notify', region_draw)
316 self.register('button_release', region_disable)
317
318 def region_draw(event):
319 self.canvas._tkcanvas.delete(self.rect['fig'])
320 self.rect['fig'] = self.canvas._tkcanvas.create_rectangle(
321 self.rect['x'], self.rect['y'],
322 event.x, self.rect['height'] - event.y)
323
324 def region_disable(event):
325 self.register('motion_notify', None)
326 self.register('button_release', None)
327
328 self.canvas._tkcanvas.delete(self.rect['fig'])
329
330 self.rect['world'][2:4] = [event.xdata, event.ydata]
331 print '(%.2f, %.2f) (%.2f, %.2f)' % (self.rect['world'][0],
332 self.rect['world'][1], self.rect['world'][2],
333 self.rect['world'][3])
334
335 self.register('button_press', region_start)
336
337 # This has to be modified to block and return the result (currently
338 # printed by region_disable) when that becomes possible in matplotlib.
339
340 return [0.0, 0.0, 0.0, 0.0]
341
342
343 def register(self, type=None, func=None):
344 """
345 Register, reregister, or deregister events of type 'button_press',
346 'button_release', or 'motion_notify'.
347
348 The specified callback function should have the following signature:
349
350 def func(event)
351
352 where event is an MplEvent instance containing the following data:
353
354 name # Event name.
355 canvas # FigureCanvas instance generating the event.
356 x = None # x position - pixels from left of canvas.
357 y = None # y position - pixels from bottom of canvas.
358 button = None # Button pressed: None, 1, 2, 3.
359 key = None # Key pressed: None, chr(range(255)), shift,
360 win, or control
361 inaxes = None # Axes instance if cursor within axes.
362 xdata = None # x world coordinate.
363 ydata = None # y world coordinate.
364
365 For example:
366
367 def mouse_move(event):
368 print event.xdata, event.ydata
369
370 a = asaplot()
371 a.register('motion_notify', mouse_move)
372
373 If func is None, the event is deregistered.
374
375 Note that in TkAgg keyboard button presses don't generate an event.
376 """
377
378 if not self.events.has_key(type): return
379
380 if func is None:
381 if self.events[type] is not None:
382 # It's not clear that this does anything.
383 self.canvas.mpl_disconnect(self.events[type])
384 self.events[type] = None
385
386 # It seems to be necessary to return events to the toolbar.
387 if type == 'motion_notify':
388 self.canvas.mpl_connect(type + '_event',
389 self.figmgr.toolbar.mouse_move)
390 elif type == 'button_press':
391 self.canvas.mpl_connect(type + '_event',
392 self.figmgr.toolbar.press)
393 elif type == 'button_release':
394 self.canvas.mpl_connect(type + '_event',
395 self.figmgr.toolbar.release)
396
397 else:
398 self.events[type] = self.canvas.mpl_connect(type + '_event', func)
399
400
401 def release(self):
402 """
403 Release buffered graphics.
404 """
405 self.buffering = False
406 self.show()
407
408
409 def save(self, fname=None, orientation=None, dpi=None):
410 """
411 Save the plot to a file.
412
413 fname is the name of the output file. The image format is determined
414 from the file suffix; 'png', 'ps', and 'eps' are recognized. If no
415 file name is specified 'yyyymmdd_hhmmss.png' is created in the current
416 directory.
417 """
418 if fname is None:
419 from datetime import datetime
420 dstr = datetime.now().strftime('%Y%m%d_%H%M%S')
421 fname = 'asap'+dstr+'.png'
422
423 d = ['png','.ps','eps']
424
425 from os.path import expandvars
426 fname = expandvars(fname)
427
428 if fname[-3:].lower() in d:
429 try:
430 if fname[-3:].lower() == ".ps":
431 from matplotlib import __version__ as mv
432 w = self.figure.figwidth.get()
433 h = self.figure.figheight.get()
434
435 if orientation is None:
436 # auto oriented
437 if w > h:
438 orientation = 'landscape'
439 else:
440 orientation = 'portrait'
441 a4w = 8.25
442 a4h = 11.25
443 ds = None
444 if orientation == 'landscape':
445 ds = min(a4h/w,a4w/h)
446 else:
447 ds = min(a4w/w,a4h/h)
448 ow = ds * w
449 oh = ds * h
450 self.figure.set_figsize_inches((ow,oh))
451 from matplotlib import __version__ as mv
452 # hack to circument ps bug in eraly versions of mpl
453 if int(mv.split(".")[1]) < 87:
454 self.figure.savefig(fname, orientation=orientation)
455 else:
456 self.figure.savefig(fname, orientation=orientation,
457 papertype="a4")
458 self.figure.set_figsize_inches((w,h))
459 print 'Written file %s' % (fname)
460 else:
461 if dpi is None:
462 dpi =150
463 self.figure.savefig(fname,dpi=dpi)
464 print 'Written file %s' % (fname)
465 except IOError, msg:
466 print 'Failed to save %s: Error msg was\n\n%s' % (fname, err)
467 return
468 else:
469 print "Invalid image type. Valid types are:"
470 print "'ps', 'eps', 'png'"
471
472
473 def set_axes(self, what=None, *args, **kwargs):
474 """
475 Set attributes for the axes by calling the relevant Axes.set_*()
476 method. Colour translation is done as described in the doctext
477 for palette().
478 """
479
480 if what is None: return
481 if what[-6:] == 'colour': what = what[:-6] + 'color'
482
483 newargs = {}
484
485 for k, v in kwargs.iteritems():
486 k = k.lower()
487 if k == 'colour': k = 'color'
488 newargs[k] = v
489
490 getattr(self.axes, "set_%s"%what)(*args, **newargs)
491
492 self.show()
493
494
495 def set_figure(self, what=None, *args, **kwargs):
496 """
497 Set attributes for the figure by calling the relevant Figure.set_*()
498 method. Colour translation is done as described in the doctext
499 for palette().
500 """
501
502 if what is None: return
503 if what[-6:] == 'colour': what = what[:-6] + 'color'
504 #if what[-5:] == 'color' and len(args):
505 # args = (get_colour(args[0]),)
506
507 newargs = {}
508 for k, v in kwargs.iteritems():
509 k = k.lower()
510 if k == 'colour': k = 'color'
511 newargs[k] = v
512
513 getattr(self.figure, "set_%s"%what)(*args, **newargs)
514 self.show()
515
516
517 def set_limits(self, xlim=None, ylim=None):
518 """
519 Set x-, and y-limits for each subplot.
520
521 xlim = [xmin, xmax] as in axes.set_xlim().
522 ylim = [ymin, ymax] as in axes.set_ylim().
523 """
524 for s in self.subplots:
525 self.axes = s['axes']
526 self.lines = s['lines']
527 oldxlim = list(self.axes.get_xlim())
528 oldylim = list(self.axes.get_ylim())
529 if xlim is not None:
530 for i in range(len(xlim)):
531 if xlim[i] is not None:
532 oldxlim[i] = xlim[i]
533 if ylim is not None:
534 for i in range(len(ylim)):
535 if ylim[i] is not None:
536 oldylim[i] = ylim[i]
537 self.axes.set_xlim(oldxlim)
538 self.axes.set_ylim(oldylim)
539 return
540
541
542 def set_line(self, number=None, **kwargs):
543 """
544 Set attributes for the specified line, or else the next line(s)
545 to be plotted.
546
547 number is the 0-relative number of a line that has already been
548 plotted. If no such line exists, attributes are recorded and used
549 for the next line(s) to be plotted.
550
551 Keyword arguments specify Line2D attributes, e.g. color='r'. Do
552
553 import matplotlib
554 help(matplotlib.lines)
555
556 The set_* methods of class Line2D define the attribute names and
557 values. For non-US usage, "colour" is recognized as synonymous with
558 "color".
559
560 Set the value to None to delete an attribute.
561
562 Colour translation is done as described in the doctext for palette().
563 """
564
565 redraw = False
566 for k, v in kwargs.iteritems():
567 k = k.lower()
568 if k == 'colour': k = 'color'
569
570 if 0 <= number < len(self.lines):
571 if self.lines[number] is not None:
572 for line in self.lines[number]:
573 getattr(line, "set_%s"%k)(v)
574 redraw = True
575 else:
576 if v is None:
577 del self.attributes[k]
578 else:
579 self.attributes[k] = v
580
581 if redraw: self.show()
582
583
584 def set_panels(self, rows=1, cols=0, n=-1, nplots=-1, ganged=True):
585 """
586 Set the panel layout.
587
588 rows and cols, if cols != 0, specify the number of rows and columns in
589 a regular layout. (Indexing of these panels in matplotlib is row-
590 major, i.e. column varies fastest.)
591
592 cols == 0 is interpreted as a retangular layout that accomodates
593 'rows' panels, e.g. rows == 6, cols == 0 is equivalent to
594 rows == 2, cols == 3.
595
596 0 <= n < rows*cols is interpreted as the 0-relative panel number in
597 the configuration specified by rows and cols to be added to the
598 current figure as its next 0-relative panel number (i). This allows
599 non-regular panel layouts to be constructed via multiple calls. Any
600 other value of n clears the plot and produces a rectangular array of
601 empty panels. The number of these may be limited by nplots.
602 """
603 if n < 0 and len(self.subplots):
604 self.figure.clear()
605 self.set_title()
606
607 if rows < 1: rows = 1
608
609 if cols <= 0:
610 i = int(sqrt(rows))
611 if i*i < rows: i += 1
612 cols = i
613
614 if i*(i-1) >= rows: i -= 1
615 rows = i
616
617 if 0 <= n < rows*cols:
618 i = len(self.subplots)
619 self.subplots.append({})
620
621 self.subplots[i]['axes'] = self.figure.add_subplot(rows,
622 cols, n+1)
623 self.subplots[i]['lines'] = []
624
625 if i == 0: self.subplot(0)
626
627 self.rows = 0
628 self.cols = 0
629
630 else:
631 self.subplots = []
632
633 if nplots < 1 or rows*cols < nplots:
634 nplots = rows*cols
635 if ganged:
636 hsp,wsp = None,None
637 if rows > 1: hsp = 0.0001
638 if cols > 1: wsp = 0.0001
639 self.figure.subplots_adjust(wspace=wsp,hspace=hsp)
640 for i in range(nplots):
641 self.subplots.append({})
642 self.subplots[i]['axes'] = self.figure.add_subplot(rows,
643 cols, i+1)
644 self.subplots[i]['lines'] = []
645
646 if ganged:
647 # Suppress tick labelling for interior subplots.
648 if i <= (rows-1)*cols - 1:
649 if i+cols < nplots:
650 # Suppress x-labels for frames width
651 # adjacent frames
652 self.subplots[i]['axes'].xaxis.set_major_locator(NullLocator())
653 self.subplots[i]['axes'].xaxis.label.set_visible(False)
654 if i%cols:
655 # Suppress y-labels for frames not in the left column.
656 for tick in self.subplots[i]['axes'].yaxis.majorTicks:
657 tick.label1On = False
658 self.subplots[i]['axes'].yaxis.label.set_visible(False)
659 # disable the first tick of [1:ncol-1] of the last row
660 if (nplots-cols) < i <= nplots-1:
661 self.subplots[i]['axes'].xaxis.set_major_formatter(MyFormatter())
662 self.rows = rows
663 self.cols = cols
664 self.subplot(0)
665
666 def set_title(self, title=None):
667 """
668 Set the title of the plot window. Use the previous title if title is
669 omitted.
670 """
671 if title is not None:
672 self.title = title
673
674 self.figure.text(0.5, 0.95, self.title, horizontalalignment='center')
675
676
677 def show(self):
678 """
679 Show graphics dependent on the current buffering state.
680 """
681 if not self.buffering:
682 if self.loc is not None:
683 for j in range(len(self.subplots)):
684 lines = []
685 labels = []
686 i = 0
687 for line in self.subplots[j]['lines']:
688 i += 1
689 if line is not None:
690 lines.append(line[0])
691 lbl = line[0].get_label()
692 if lbl == '':
693 lbl = str(i)
694 labels.append(lbl)
695
696 if len(lines):
697 self.subplots[j]['axes'].legend(tuple(lines),
698 tuple(labels),
699 self.loc)
700 else:
701 self.subplots[j]['axes'].legend((' '))
702
703
704 def subplot(self, i=None, inc=None):
705 """
706 Set the subplot to the 0-relative panel number as defined by one or
707 more invokations of set_panels().
708 """
709 l = len(self.subplots)
710 if l:
711 if i is not None:
712 self.i = i
713
714 if inc is not None:
715 self.i += inc
716
717 self.i %= l
718 self.axes = self.subplots[self.i]['axes']
719 self.lines = self.subplots[self.i]['lines']
720
721
722 def text(self, *args, **kwargs):
723 """
724 Add text to the figure.
725 """
726 self.figure.text(*args, **kwargs)
727 self.show()
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