source: trunk/external-alma/atnf/PKSIO/NRODataset.cc@ 2784

Last change on this file since 2784 was 2783, checked in by Takeshi Nakazato, 12 years ago

New Development: No

JIRA Issue: No

Ready for Test: Yes

Interface Changes: No

What Interface Changed: Please list interface changes

Test Programs: List test programs

Put in Release Notes: Yes/No

Module(s): Module Names change impacts.

Description: Describe your changes here...

more refactoring on NRO filler.


File size: 45.7 KB
RevLine 
[1757]1//#---------------------------------------------------------------------------
2//# NRODataset.cc: Base class for NRO dataset.
3//#---------------------------------------------------------------------------
4//# Copyright (C) 2000-2006
5//# Associated Universities, Inc. Washington DC, USA.
6//#
7//# This library is free software; you can redistribute it and/or modify it
8//# under the terms of the GNU Library General Public License as published by
9//# the Free Software Foundation; either version 2 of the License, or (at your
10//# option) any later version.
11//#
12//# This library is distributed in the hope that it will be useful, but WITHOUT
13//# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
14//# FITNESS FOR A PARTICULAR PURPOSE. See the GNU Library General Public
15//# License for more details.
16//#
17//# You should have received a copy of the GNU Library General Public License
18//# along with this library; if not, write to the Free Software Foundation,
19//# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
20//#
21//# Correspondence concerning AIPS++ should be addressed as follows:
22//# Internet email: aips2-request@nrao.edu.
23//# Postal address: AIPS++ Project Office
24//# National Radio Astronomy Observatory
25//# 520 Edgemont Road
26//# Charlottesville, VA 22903-2475 USA
27//#
28//# $Id$
29//#---------------------------------------------------------------------------
30//# Original: 2009/02/27, Takeshi Nakazato, NAOJ
31//#---------------------------------------------------------------------------
32
33#include <atnf/PKSIO/NRODataset.h>
34#include <casa/OS/Time.h>
[2748]35#include <casa/Utilities/Regex.h>
[1757]36#include <scimath/Mathematics/InterpolateArray1D.h>
37
[1868]38#include <measures/Measures/MeasConvert.h>
39#include <measures/Measures/MCFrequency.h>
40#include <measures/Measures/MFrequency.h>
41#include <measures/Measures/MPosition.h>
42#include <measures/Measures/MEpoch.h>
43#include <measures/Measures/MDirection.h>
44
[1757]45#include <math.h>
46#include <fstream>
47
48//#include <casa/namespace.h>
49
50using namespace std ;
51
52//
53// NRODataset
54//
55// Base class for NRO dataset.
56//
57
58// constructor
[2782]59NRODataset::NRODataset( string name )
60 : scanNum_(0),
61 rowNum_(0),
62 scanLen_(0),
63 dataLen_(0),
64 dataid_(-1),
65 filename_(name),
66 fp_(NULL),
67 same_(-1),
68 frec_()
[2783]69{
70 // size for common part of data
71 datasize_ = sizeof( char ) * 8 // LOFIL
72 + sizeof( char ) * 8 // VER
73 + sizeof( char ) * 16 // GROUP
74 + sizeof( char ) * 16 // PROJ
75 + sizeof( char ) * 24 // SCHED
76 + sizeof( char ) * 40 // OBSVR
77 + sizeof( char ) * 16 // LOSTM
78 + sizeof( char ) * 16 // LOETM
79 + sizeof( int ) * 2 // ARYNM, NSCAN
80 + sizeof( char ) * 120 // TITLE
81 + sizeof( char ) * 16 // OBJ
82 + sizeof( char ) * 8 // EPOCH
83 + sizeof( double ) * 4 // RA0, DEC0, GLNG0, GLAT0
84 + sizeof( int ) * 2 // NCALB, SCNCD
85 + sizeof( char ) * 120 // SCMOD
86 + sizeof( double ) // URVEL
87 + sizeof( char ) * 4 // VREF
88 + sizeof( char ) * 4 // VDEF
89 + sizeof( char ) * 8 // SWMOD
90 + sizeof( double ) * 8 // FRQSW, DBEAM, MLTOF, CMTQ, CMTE, CMTSOM, CMTNODE, CMTI
91 + sizeof( char ) * 24 // CMTTM
92 + sizeof( double ) * 6 // SBDX, SBDY, SBDZ1, SBDZ2, DAZP, DELP
93 + sizeof( int ) * 4 // CHBIND, NUMCH, CHMIN, CHMAX
94 + sizeof( double ) * 3 // ALCTM, IPTIM, PA
95 + sizeof( int ) * 3 // SCNLEN, SBIND, IBIT
96 + sizeof( char ) * 8 ; // SITE
97}
[1757]98
99// destructor
100NRODataset::~NRODataset()
101{
102 // release memory
103 releaseRecord() ;
104
105 // close file
106 close() ;
107}
108
109// data initialization
[2783]110void NRODataset::initializeCommon()
[1757]111{
[2782]112 LogIO os( LogOrigin( "NRODataset", "initialize()", WHERE ) ) ;
113
114 int arymax = arrayMax() ;
115
116 // check endian
117 open() ;
118 fseek( fp_, 144, SEEK_SET ) ;
119 int tmp ;
120 if( fread( &tmp, 1, sizeof(int), fp_ ) != sizeof(int) ) {
121 os << LogIO::SEVERE << "Error while checking endian of the file. " << LogIO::EXCEPTION ;
122 return ;
123 }
124 if ( ( 0 < tmp ) && ( tmp <= arymax ) ) {
125 same_ = 1 ;
126 os << LogIO::NORMAL << "same endian " << LogIO::POST ;
127 }
128 else {
129 same_ = 0 ;
130 os << LogIO::NORMAL << "different endian " << LogIO::POST ;
131 }
132 fseek( fp_, 0, SEEK_SET ) ;
133
134 // common part of calculation of data size and memory allocation
135 RX.resize( arymax ) ;
136 HPBW.resize( arymax ) ;
137 EFFA.resize( arymax ) ;
138 EFFB.resize( arymax ) ;
139 EFFL.resize( arymax ) ;
140 EFSS.resize( arymax ) ;
141 GAIN.resize( arymax ) ;
142 HORN.resize( arymax ) ;
143 POLTP.resize( arymax ) ;
144 POLDR.resize( arymax ) ;
145 POLAN.resize( arymax ) ;
146 DFRQ.resize( arymax ) ;
147 SIDBD.resize( arymax ) ;
148 REFN.resize( arymax ) ;
149 IPINT.resize( arymax ) ;
150 MULTN.resize( arymax ) ;
151 MLTSCF.resize( arymax ) ;
152 LAGWIND.resize( arymax ) ;
153 BEBW.resize( arymax ) ;
154 BERES.resize( arymax ) ;
155 CHWID.resize( arymax ) ;
156 ARRY.resize( arymax ) ;
157 NFCAL.resize( arymax ) ;
158 F0CAL.resize( arymax ) ;
159 FQCAL.resize( arymax ) ;
160 CHCAL.resize( arymax ) ;
161 CWCAL.resize( arymax ) ;
162 DSBFC.resize( arymax ) ;
163
164 for ( int i = 0 ; i < arymax ; i++ ) {
165 FQCAL[i].resize( 10 ) ;
166 CHCAL[i].resize( 10 ) ;
167 CWCAL[i].resize( 10 ) ;
168 }
169
[1757]170 // NRODataRecord
171 record_ = new NRODataRecord() ;
172 record_->LDATA = NULL ;
[2782]173
174 // reference frequency
175 refFreq_.resize( arymax, 0.0 ) ;
[1757]176}
177
[2782]178// fill data header
179int NRODataset::fillHeader()
180{
181 LogIO os( LogOrigin( "NRODataset", "fillHeader()", WHERE ) ) ;
182
183 // open file
184 if ( open() ) {
185 os << LogIO::SEVERE << "Error opening file " << filename_ << "." << LogIO::EXCEPTION ;
186 return -1 ;
187 }
188
189 // fill
190 int status = fillHeader( same_ ) ;
191
192 if ( status != 0 ) {
193 os << LogIO::SEVERE << "Error while reading header " << filename_ << "." << LogIO::EXCEPTION ;
194 return status ;
195 }
196
[2783]197// //scanNum_ = NSCAN + 1 ; // includes ZERO scan
198// scanLen_ = SCNLEN ;
199// dataLen_ = scanLen_ - SCAN_HEADER_SIZE ;
200// scanNum_ = getScanNum();
201// rowNum_ = scanNum_ * ARYNM ;
202// chmax_ = (int) ( dataLen_ * 8 / IBIT ) ;
203// record_->LDATA = new char[dataLen_] ;
204
205 initArray();
206
207 show() ;
208
209 return status ;
210}
211
212int NRODataset::fillHeaderCommon( int sameEndian )
213{
214 LogIO os( LogOrigin( "NRODataset", "fillHeader()", WHERE ) ) ;
215
216 int arymax = arrayMax() ;
217
218 string str4( 4, ' ' ) ;
219 string str8( 8, ' ' ) ;
220 string str16( 16, ' ' ) ;
221 string str18( 18, ' ' ) ;
222 string str24( 24, ' ' ) ;
223 string str40( 40, ' ' ) ;
224 string str120( 120, ' ' ) ;
225 char c4[4] ;
226 char c8[8] ;
227 char c16[16] ;
228 char c18[18] ;
229 char c24[24] ;
230 char c40[40] ;
231 char c120[120] ;
232
233 // make sure file pointer points a beginning of the file
234 fseek( fp_, 0, SEEK_SET ) ;
235
236 // read data header
237 strcpy( c8, str8.c_str() ) ;
238 if ( readHeader( c8, 8 ) == -1 ) {
239 os << LogIO::WARN << "Error while reading data LOFIL." << LogIO::POST ;
240 return -1 ;
241 }
242 LOFIL = string( c8 ) ;
243 // DEBUG
244 //cout << "LOFIL = " << LOFIL << endl ;
245 //
246 strcpy( c8, str8.c_str() ) ;
247 if ( readHeader( c8, 8 ) == -1 ) {
248 os << LogIO::WARN << "Error while reading data VER." << LogIO::POST ;
249 return -1 ;
250 }
251 VER = string( c8 ) ;
252 // DEBUG
253 //cout << "VER = " << VER << endl ;
254 //
255 strcpy( c16, str16.c_str() ) ;
256 if ( readHeader( c16, 16 ) == -1 ) {
257 os << LogIO::WARN << "Error while reading data GROUP." << LogIO::POST ;
258 return -1 ;
259 }
260 GROUP = string( c16 ) ;
261 // DEBUG
262 //cout << "GROUP = " << GROUP << endl ;
263 //
264 strcpy( c16, str16.c_str() ) ;
265 if ( readHeader( c16, 16 ) == -1 ) {
266 os << LogIO::WARN << "Error while reading data PROJ." << LogIO::POST ;
267 return -1 ;
268 }
269 PROJ = string( c16 ) ;
270 // DEBUG
271 //cout << "PROJ = " << PROJ << endl ;
272 //
273 strcpy( c24, str24.c_str() ) ;
274 if ( readHeader( c24, 24 ) == -1 ) {
275 os << LogIO::WARN << "Error while reading data SCHED." << LogIO::POST ;
276 return -1 ;
277 }
278 SCHED = string( c24 ) ;
279 // DEBUG
280 //cout << "SCHED = " << SCHED << endl ;
281 //
282 strcpy( c40, str40.c_str() ) ;
283 if ( readHeader( c40, 40 ) == -1 ) {
284 os << LogIO::WARN << "Error while reading data OBSVR." << LogIO::POST ;
285 return -1 ;
286 }
287 OBSVR = string( c40 ) ;
288 // DEBUG
289 //cout << "OBSVR = " << OBSVR << endl ;
290 //
291 strcpy( c16, str16.c_str() ) ;
292 if ( readHeader( c16, 16 ) == -1 ) {
293 os << LogIO::WARN << "Error while reading data LOSTM." << LogIO::POST ;
294 return -1 ;
295 }
296 LOSTM = string( c16 ) ;
297 // DEBUG
298 //cout << "LOSTM = " << LOSTM << endl ;
299 //
300 strcpy( c16, str16.c_str() ) ;
301 if ( readHeader( c16, 16 ) == -1 ) {
302 os << LogIO::WARN << "Error while reading data LOETM." << LogIO::POST ;
303 return -1 ;
304 }
305 LOETM = string( c16 ) ;
306 // DEBUG
307 //cout << "LOETM = " << LOETM << endl ;
308 //
309 if ( readHeader( ARYNM, sameEndian ) == -1 ) {
310 os << LogIO::WARN << "Error while reading data ARYNM." << LogIO::POST ;
311 return -1 ;
312 }
313 // DEBUG
314 //cout << "ARYNM = " << ARYNM << endl ;
315 //
316 if ( readHeader( NSCAN, sameEndian ) == -1 ) {
317 os << LogIO::WARN << "Error while reading data NSCAN." << LogIO::POST ;
318 return -1 ;
319 }
320 // DEBUG
321 //cout << "NSCAN = " << NSCAN << endl ;
322 //
323 strcpy( c120, str120.c_str() ) ;
324 if ( readHeader( c120, 120 ) == -1 ) {
325 os << LogIO::WARN << "Error while reading data TITLE." << LogIO::POST ;
326 return -1 ;
327 }
328 TITLE = string( c120 ) ;
329 // DEBUG
330 //cout << "TITLE = " << TITLE << endl ;
331 //
332 strcpy( c16, str16.c_str() ) ;
333 if ( readHeader( c16, 16 ) == -1 ) {
334 os << LogIO::WARN << "Error while reading data OBJ." << LogIO::POST ;
335 return -1 ;
336 }
337 OBJ = string( c16 ) ;
338 // DEBUG
339 //cout << "OBJ = " << OBJ << endl ;
340 //
341 strcpy( c8, str8.c_str() ) ;
342 if ( readHeader( c8, 8 ) == -1 ) {
343 os << LogIO::WARN << "Error while reading data EPOCH." << LogIO::POST ;
344 return -1 ;
345 }
346 EPOCH = string( c8 ) ;
347 // DEBUG
348 //cout << "EPOCH = " << EPOCH << endl ;
349 //
350 if ( readHeader( RA0, sameEndian ) == -1 ) {
351 os << LogIO::WARN << "Error while reading data RA0." << LogIO::POST ;
352 return -1 ;
353 }
354 // DEBUG
355 //cout << "RA0 = " << RA0 << endl ;
356 //
357 if ( readHeader( DEC0, sameEndian ) == -1 ) {
358 os << LogIO::WARN << "Error while reading data DEC0." << LogIO::POST ;
359 return -1 ;
360 }
361 // DEBUG
362 //cout << "DEC0 = " << DEC0 << endl ;
363 //
364 if ( readHeader( GLNG0, sameEndian ) == -1 ) {
365 os << LogIO::WARN << "Error while reading data GLNG0." << LogIO::POST ;
366 return -1 ;
367 }
368 // DEBUG
369 //cout << "GLNG0 = " << GLNG0 << endl ;
370 //
371 if ( readHeader( GLAT0, sameEndian ) == -1 ) {
372 os << LogIO::WARN << "Error while reading data GLAT0." << LogIO::POST ;
373 return -1 ;
374 }
375 // DEBUG
376 //cout << "GLAT0 = " << GLAT0 << endl ;
377 //
378 if ( readHeader( NCALB, sameEndian ) == -1 ) {
379 os << LogIO::WARN << "Error while reading data NCALB." << LogIO::POST ;
380 return -1 ;
381 }
382 // DEBUG
383 //cout << "NCALB = " << NCALB << endl ;
384 //
385 if ( readHeader( SCNCD, sameEndian ) == -1 ) {
386 os << LogIO::WARN << "Error while reading data SCNCD." << LogIO::POST ;
387 return -1 ;
388 }
389 // DEBUG
390 //cout << "SCNCD = " << SCNCD << endl ;
391 //
392 strcpy( c120, str120.c_str() ) ;
393 if ( readHeader( c120, 120 ) == -1 ) {
394 os << LogIO::WARN << "Error while reading data SCMOD." << LogIO::POST ;
395 return -1 ;
396 }
397 SCMOD = string( c120 ) ;
398 // DEBUG
399 //cout << "SCMOD = " << SCMOD << endl ;
400 //
401 if ( readHeader( URVEL, sameEndian ) == -1 ) {
402 os << LogIO::WARN << "Error while reading data URVEL." << LogIO::POST ;
403 return -1 ;
404 }
405 // DEBUG
406 //cout << "URVEL = " << URVEL << endl ;
407 //
408 strcpy( c4, str4.c_str() ) ;
409 if ( readHeader( c4, 4 ) == -1 ) {
410 os << LogIO::WARN << "Error while reading data VREF." << LogIO::POST ;
411 return -1 ;
412 }
413 VREF = string( c4 ) ;
414 // DEBUG
415 //cout << "VREF = " << VREF << endl ;
416 //
417 strcpy( c4, str4.c_str() ) ;
418 if ( readHeader( c4, 4 ) == -1 ) {
419 os << LogIO::WARN << "Error while reading data VDEF." << LogIO::POST ;
420 return -1 ;
421 }
422 VDEF = string( c4 ) ;
423 // DEBUG
424 //cout << "VDEF = " << VDEF << endl ;
425 //
426 strcpy( c8, str8.c_str() ) ;
427 if ( readHeader( c8, 8 ) == -1 ) {
428 os << LogIO::WARN << "Error while reading data SWMOD." << LogIO::POST ;
429 return -1 ;
430 }
431 SWMOD = string( c8 ) + "::OTF" ;
432 // DEBUG
433 //cout << "SWMOD = " << SWMOD << endl ;
434 //
435 if ( readHeader( FRQSW, sameEndian ) == -1 ) {
436 os << LogIO::WARN << "Error while reading data FRQSW." << LogIO::POST ;
437 return -1 ;
438 }
439 // DEBUG
440 //cout << "FRQSW = " << FRQSW << endl ;
441 //
442 if ( readHeader( DBEAM, sameEndian ) == -1 ) {
443 os << LogIO::WARN << "Error while reading data DBEAM." << LogIO::POST ;
444 return -1 ;
445 }
446 // DEBUG
447 //cout << "DBEAM = " << DBEAM << endl ;
448 //
449 if ( readHeader( MLTOF, sameEndian ) == -1 ) {
450 os << LogIO::WARN << "Error while reading data MLTOF." << LogIO::POST ;
451 return -1 ;
452 }
453 // DEBUG
454 //cout << "MLTOF = " << MLTOF << endl ;
455 //
456 if ( readHeader( CMTQ, sameEndian ) == -1 ) {
457 os << LogIO::WARN << "Error while reading data CMTQ." << LogIO::POST ;
458 return -1 ;
459 }
460 // DEBUG
461 //cout << "CMTQ = " << CMTQ << endl ;
462 //
463 if ( readHeader( CMTE, sameEndian ) == -1 ) {
464 os << LogIO::WARN << "Error while reading data CMTE." << LogIO::POST ;
465 return -1 ;
466 }
467 // DEBUG
468 //cout << "CMTE = " << CMTE << endl ;
469 //
470 if ( readHeader( CMTSOM, sameEndian ) == -1 ) {
471 os << LogIO::WARN << "Error while reading data CMTSOM." << LogIO::POST ;
472 return -1 ;
473 }
474 // DEBUG
475 //cout << "CMTSOM = " << CMTSOM << endl ;
476 //
477 if ( readHeader( CMTNODE, sameEndian ) == -1 ) {
478 os << LogIO::WARN << "Error while reading data CMTNODE." << LogIO::POST ;
479 return -1 ;
480 }
481 // DEBUG
482 //cout << "CMTNODE = " << CMTNODE << endl ;
483 //
484 if ( readHeader( CMTI, sameEndian ) == -1 ) {
485 os << LogIO::WARN << "Error while reading data CMTI." << LogIO::POST ;
486 return -1 ;
487 }
488 // DEBUG
489 //cout << "CMTI = " << CMTI << endl ;
490 //
491 strcpy( c24, str24.c_str() ) ;
492 if ( readHeader( c24, 24 ) == -1 ) {
493 os << LogIO::WARN << "Error while reading data CMTTM." << LogIO::POST ;
494 return -1 ;
495 }
496 CMTTM = string( c24 ) ;
497 // DEBUG
498 //cout << "CMTTM = " << CMTTM << endl ;
499 //
500 if ( readHeader( SBDX, sameEndian ) == -1 ) {
501 os << LogIO::WARN << "Error while reading data SBDX." << LogIO::POST ;
502 return -1 ;
503 }
504 // DEBUG
505 //cout << "SBDX = " << SBDX << endl ;
506 //
507 if ( readHeader( SBDY, sameEndian ) == -1 ) {
508 os << LogIO::WARN << "Error while reading data SBDY." << LogIO::POST ;
509 return -1 ;
510 }
511 // DEBUG
512 //cout << "SBDY = " << SBDY << endl ;
513 //
514 if ( readHeader( SBDZ1, sameEndian ) == -1 ) {
515 os << LogIO::WARN << "Error while reading data SBDZ1." << LogIO::POST ;
516 return -1 ;
517 }
518 // DEBUG
519 //cout << "SBDZ1 = " << SBDZ1 << endl ;
520 //
521 if ( readHeader( SBDZ2, sameEndian ) == -1 ) {
522 os << LogIO::WARN << "Error while reading data SBDZ2." << LogIO::POST ;
523 return -1 ;
524 }
525 // DEBUG
526 //cout << "SBDZ2 = " << SBDZ2 << endl ;
527 //
528 if ( readHeader( DAZP, sameEndian ) == -1 ) {
529 os << LogIO::WARN << "Error while reading data DAZP." << LogIO::POST ;
530 return -1 ;
531 }
532 // DEBUG
533 //cout << "DAZP = " << DAZP << endl ;
534 //
535 if ( readHeader( DELP, sameEndian ) == -1 ) {
536 os << LogIO::WARN << "Error while reading data DELP." << LogIO::POST ;
537 return -1 ;
538 }
539 // DEBUG
540 //cout << "DELP = " << DELP << endl ;
541 //
542 if ( readHeader( CHBIND, sameEndian ) == -1 ) {
543 os << LogIO::WARN << "Error while reading data CHBIND." << LogIO::POST ;
544 return -1 ;
545 }
546 // DEBUG
547 //cout << "CHBIND = " << CHBIND << endl ;
548 //
549 if ( readHeader( NUMCH, sameEndian ) == -1 ) {
550 os << LogIO::WARN << "Error while reading data NUMCH." << LogIO::POST ;
551 return -1 ;
552 }
553 // DEBUG
554 //cout << "NUMCH = " << NUMCH << endl ;
555 //
556 if ( readHeader( CHMIN, sameEndian ) == -1 ) {
557 os << LogIO::WARN << "Error while reading data CHMIN." << LogIO::POST ;
558 return -1 ;
559 }
560 // DEBUG
561 //cout << "CHMIN = " << CHMIN << endl ;
562 //
563 if ( readHeader( CHMAX, sameEndian ) == -1 ) {
564 os << LogIO::WARN << "Error while reading data CHMAX." << LogIO::POST ;
565 return -1 ;
566 }
567 // DEBUG
568 //cout << "CHMAX = " << CHMAX << endl ;
569 //
570 if ( readHeader( ALCTM, sameEndian ) == -1 ) {
571 os << LogIO::WARN << "Error while reading data ALCTM." << LogIO::POST ;
572 return -1 ;
573 }
574 // DEBUG
575 //cout << "ALCTM = " << ALCTM << endl ;
576 //
577 if ( readHeader( IPTIM, sameEndian ) == -1 ) {
578 os << LogIO::WARN << "Error while reading data IPTIM." << LogIO::POST ;
579 return -1 ;
580 }
581 // DEBUG
582 //cout << "IPTIM = " << IPTIM << endl ;
583 //
584 if ( readHeader( PA, sameEndian ) == -1 ) {
585 os << LogIO::WARN << "Error while reading data PA." << LogIO::POST ;
586 return -1 ;
587 }
588 // DEBUG
589 //cout << "PA = " << PA << endl ;
590 //
591 for ( int i = 0 ; i < arymax ; i++ ) {
592 strcpy( c18, str18.c_str() ) ;
593 if ( readHeader( c18, 16 ) == -1 ) {
594 os << LogIO::WARN << "Error while reading data RX[" << i << "]." << LogIO::POST ;
595 return -1 ;
596 }
597 c18[16] = '\0' ;
598 RX[i] = string( c18 ) ;
599 }
600 // DEBUG
601// nro_debug_output( "RX", arymax, RX ) ;
602 //
603 for ( int i = 0 ; i < arymax ; i++ ) {
604 if ( readHeader( HPBW[i], sameEndian ) == -1 ) {
605 os << LogIO::WARN << "Error while reading data HPBW[" << i << "]." << LogIO::POST ;
606 return -1 ;
607 }
608 }
609 // DEBUG
610// nro_debug_output( "HPBW", arymax, HPBW ) ;
611 //
612 for ( int i = 0 ; i < arymax ; i++ ) {
613 if ( readHeader( EFFA[i], sameEndian ) == -1 ) {
614 os << LogIO::WARN << "Error while reading data EFFA[" << i << "]." << LogIO::POST ;
615 return -1 ;
616 }
617 }
618 // DEBUG
619// nro_debug_output( "EFFA", arymax, EFFA ) ;
620 //
621 for ( int i = 0 ; i < arymax ; i++ ) {
622 if ( readHeader( EFFB[i], sameEndian ) == -1 ) {
623 os << LogIO::WARN << "Error while reading data EFFB[" << i << "]." << LogIO::POST ;
624 return -1 ;
625 }
626 }
627 // DEBUG
628// nro_debug_output( "EFFB", arymax, EFFB ) ;
629 //
630 for ( int i = 0 ; i < arymax ; i++ ) {
631 if ( readHeader( EFFL[i], sameEndian ) == -1 ) {
632 os << LogIO::WARN << "Error while reading data EFFL[" << i << "]." << LogIO::POST ;
633 return -1 ;
634 }
635 }
636 // DEBUG
637// nro_debug_output( "EFFL", arymax, EFFL ) ;
638 //
639 for ( int i = 0 ; i < arymax ; i++ ) {
640 if ( readHeader( EFSS[i], sameEndian ) == -1 ) {
641 os << LogIO::WARN << "Error while reading data EFSS[" << i << "]." << LogIO::POST ;
642 return -1 ;
643 }
644 }
645 // DEBUG
646// nro_debug_output( "EFSS", arymax, EFSS ) ;
647 //
648 for ( int i = 0 ; i < arymax ; i++) {
649 if ( readHeader( GAIN[i], sameEndian ) == -1 ) {
650 os << LogIO::WARN << "Error while reading data GAIN[" << i << "]." << LogIO::POST ;
651 return -1 ;
652 }
653 }
654 // DEBUG
655// nro_debug_output( "GAIN", arymax, GAIN ) ;
656 //
657 for ( int i = 0 ; i < arymax ; i++) {
658 strcpy( c4, str4.c_str() ) ;
659 if ( readHeader( c4, 4 ) == -1 ) {
660 os << LogIO::WARN << "Error while reading data HORN[" << i << "]." << LogIO::POST ;
661 return -1 ;
662 }
663 HORN[i] = string( c4 ) ;
664 }
665 // DEBUG
666// nro_debug_output( "HORN", arymax, HORN ) ;
667 //
668 for ( int i = 0 ; i < arymax ; i++) {
669 strcpy( c4, str4.c_str() ) ;
670 if ( readHeader( c4, 4 ) == -1 ) {
671 os << LogIO::WARN << "Error while reading data POLTP[" << i << "]." << LogIO::POST ;
672 return -1 ;
673 }
674 POLTP[i] = string( c4 ) ;
675 }
676 // DEBUG
677// nro_debug_output( "POLTP", arymax, POLTP ) ;
678 //
679 for ( int i = 0 ; i < arymax ; i++) {
680 if ( readHeader( POLDR[i], sameEndian ) == -1 ) {
681 os << LogIO::WARN << "Error while reading data POLDR[" << i << "]." << LogIO::POST ;
682 return -1 ;
683 }
684 }
685 // DEBUG
686// nro_debug_output( "POLDR", arymax, POLDR ) ;
687 //
688 for ( int i = 0 ; i < arymax ; i++) {
689 if ( readHeader( POLAN[i], sameEndian ) == -1 ) {
690 os << LogIO::WARN << "Error while reading data POLAN[" << i << "]." << LogIO::POST ;
691 return -1 ;
692 }
693 }
694 // DEBUG
695// nro_debug_output( "POLAN", arymax, POLAN ) ;
696 //
697 for ( int i = 0 ; i < arymax ; i++) {
698 if ( readHeader( DFRQ[i], sameEndian ) == -1 ) {
699 os << LogIO::WARN << "Error while reading data DFRQ[" << i << "]." << LogIO::POST ;
700 return -1 ;
701 }
702 }
703 // DEBUG
704// nro_debug_output( "DFRQ", arymax, DFRQ ) ;
705 //
706 for ( int i = 0 ; i < arymax ; i++) {
707 strcpy( c4, str4.c_str() ) ;
708 if ( readHeader( c4, 4 ) == -1 ) {
709 os << LogIO::WARN << "Error while reading data SIDBD[" << i << "]." << LogIO::POST ;
710 return -1 ;
711 }
712 SIDBD[i] = string( c4 ) ;
713 }
714 // DEBUG
715// nro_debug_output( "SIDBD", arymax, SIDBD ) ;
716 //
717 for ( int i = 0 ; i < arymax ; i++) {
718 if ( readHeader( REFN[i], sameEndian ) == -1 ) {
719 os << LogIO::WARN << "Error while reading data REFN[" << i << "]." << LogIO::POST ;
720 return -1 ;
721 }
722 }
723 // DEBUG
724// nro_debug_output( "REFN", arymax, REFN ) ;
725 //
726 for ( int i = 0 ; i < arymax ; i++) {
727 if ( readHeader( IPINT[i], sameEndian ) == -1 ) {
728 os << LogIO::WARN << "Error while reading data IPINT[" << i << "]." << LogIO::POST ;
729 return -1 ;
730 }
731 }
732 // DEBUG
733// nro_debug_output( "IPINT", arymax, IPINT ) ;
734 //
735 for ( int i = 0 ; i < arymax ; i++) {
736 if ( readHeader( MULTN[i], sameEndian ) == -1 ) {
737 os << LogIO::WARN << "Error while reading data MULTN[" << i << "]." << LogIO::POST ;
738 return -1 ;
739 }
740 }
741 // DEBUG
742// nro_debug_output( "MULTN", arymax, MULTN ) ;
743 //
744 for ( int i = 0 ; i < arymax ; i++) {
745 if ( readHeader( MLTSCF[i], sameEndian ) == -1 ) {
746 os << LogIO::WARN << "Error while reading data MLTSCF[" << i << "]." << LogIO::POST ;
747 return -1 ;
748 }
749 }
750 // DEBUG
751// nro_debug_output( "MLTSCF", arymax, MLTSCF ) ;
752 //
753 for ( int i = 0 ; i < arymax ; i++) {
754 strcpy( c8, str8.c_str() ) ;
755 if ( readHeader( c8, 8 ) == -1 ) {
756 os << LogIO::WARN << "Error while reading data LAGWIND[" << i << "]." << LogIO::POST ;
757 return -1 ;
758 }
759 LAGWIND[i] = string( c8 ) ;
760 }
761 // DEBUG
762// nro_debug_output( "LAGWIND", arymax, LAGWIND ) ;
763 //
764 for ( int i = 0 ; i < arymax ; i++) {
765 if ( readHeader( BEBW[i], sameEndian ) == -1 ) {
766 os << LogIO::WARN << "Error while reading data BEBW[" << i << "]." << LogIO::POST ;
767 return -1 ;
768 }
769 }
770 // DEBUG
771// nro_debug_output( "BEBW", arymax, BEBW ) ;
772 //
773 for ( int i = 0 ; i < arymax ; i++) {
774 if ( readHeader( BERES[i], sameEndian ) == -1 ) {
775 os << LogIO::WARN << "Error while reading data BERES[" << i << "]." << LogIO::POST ;
776 return -1 ;
777 }
778 }
779 // DEBUG
780// nro_debug_output( "BERES", arymax, BERES ) ;
781 //
782 for ( int i = 0 ; i < arymax ; i++) {
783 if ( readHeader( CHWID[i], sameEndian ) == -1 ) {
784 os << LogIO::WARN << "Error while reading data CHWID[" << i << "]." << LogIO::POST ;
785 return -1 ;
786 }
787 }
788 // DEBUG
789// nro_debug_output( "CHWID", arymax, CHWID ) ;
790 //
791 for ( int i = 0 ; i < arymax ; i++) {
792 if ( readHeader( ARRY[i], sameEndian ) == -1 ) {
793 os << LogIO::WARN << "Error while reading data ARRY[" << i << "]." << LogIO::POST ;
794 return -1 ;
795 }
796 }
797 // DEBUG
798// nro_debug_output( "ARRY", arymax, ARRY ) ;
799 //
800 for ( int i = 0 ; i < arymax ; i++) {
801 if ( readHeader( NFCAL[i], sameEndian ) == -1 ) {
802 os << LogIO::WARN << "Error while reading data NFCAL[" << i << "]." << LogIO::POST ;
803 return -1 ;
804 }
805 }
806 // DEBUG
807// nro_debug_output( "NFCAL", arymax, NFCAL ) ;
808 //
809 for ( int i = 0 ; i < arymax ; i++) {
810 if ( readHeader( F0CAL[i], sameEndian ) == -1 ) {
811 os << LogIO::WARN << "Error while reading data F0CAL[" << i << "]." << LogIO::POST ;
812 return -1 ;
813 }
814 }
815 // DEBUG
816// nro_debug_output( "F0CAL", arymax, F0CAL ) ;
817 //
818 for ( int i = 0 ; i < arymax ; i++) {
819 for ( int j = 0 ; j < 10 ; j++ ) {
820 if ( readHeader( FQCAL[i][j], sameEndian ) == -1 ) {
821 os << LogIO::WARN << "Error while reading data FQCAL[" << i << "][" << j << "]." << LogIO::POST ;
822 return -1 ;
823 }
824 }
825 }
826 // DEBUG
827// nro_debug_output( "FQCAL", arymax, 10, FQCAL ) ;
828 //
829 for ( int i = 0 ; i < arymax ; i++) {
830 for ( int j = 0 ; j < 10 ; j++ ) {
831 if ( readHeader( CHCAL[i][j], sameEndian ) == -1 ) {
832 os << LogIO::WARN << "Error while reading data CHCAL[" << i << "][" << j << "]." << LogIO::POST ;
833 return -1 ;
834 }
835 }
836 }
837 // DEBUG
838// nro_debug_output( "CHCAL", arymax, 10, CHCAL ) ;
839 //
840 for ( int i = 0 ; i < arymax ; i++) {
841 for ( int j = 0 ; j < 10 ; j++ ) {
842 if ( readHeader( CWCAL[i][j], sameEndian ) == -1 ) {
843 os << LogIO::WARN << "Error while reading data CWCAL[" << i << "][" << j << "]." << LogIO::POST ;
844 return -1 ;
845 }
846 }
847 }
848 // DEBUG
849// nro_debug_output( "CWCAL", arymax, 10, CWCAL ) ;
850 //
851 if ( readHeader( SCNLEN, sameEndian ) == -1 ) {
852 os << LogIO::WARN << "Error while reading data SCNLEN." << LogIO::POST ;
853 return -1 ;
854 }
855 // DEBUG
856 //cout << "SCNLEN = " << SCNLEN << endl ;
857 //
858 if ( readHeader( SBIND, sameEndian ) == -1 ) {
859 os << LogIO::WARN << "Error while reading data SBIND." << LogIO::POST ;
860 return -1 ;
861 }
862 // DEBUG
863 //cout << "SBIND = " << SBIND << endl ;
864 //
865 if ( readHeader( IBIT, sameEndian ) == -1 ) {
866 os << LogIO::WARN << "Error while reading data IBIT." << LogIO::POST ;
867 return -1 ;
868 }
869 // DEBUG
870 //cout << "IBIT = " << IBIT << endl ;
871 //
872 strcpy( c8, str8.c_str() ) ;
873 if ( readHeader( c8, 8 ) == -1 ) {
874 os << LogIO::WARN << "Error while reading data SITE." << LogIO::POST ;
875 return -1 ;
876 }
877 SITE = string( c8 ) ;
878 // DEBUG
879 //cout << "SITE = " << SITE << endl ;
880 //
881
[2782]882 //scanNum_ = NSCAN + 1 ; // includes ZERO scan
883 scanLen_ = SCNLEN ;
884 dataLen_ = scanLen_ - SCAN_HEADER_SIZE ;
885 scanNum_ = getScanNum();
886 rowNum_ = scanNum_ * ARYNM ;
887 chmax_ = (int) ( dataLen_ * 8 / IBIT ) ;
888 record_->LDATA = new char[dataLen_] ;
889
[2783]890 return 0 ;
[2782]891}
892
[1757]893void NRODataset::convertEndian( int &value )
894{
895 char volatile *first = reinterpret_cast<char volatile *>( &value ) ;
896 char volatile *last = first + sizeof( int ) ;
897 std::reverse( first, last ) ;
898}
899
900void NRODataset::convertEndian( float &value )
901{
902 char volatile *first = reinterpret_cast<char volatile *>( &value ) ;
903 char volatile *last = first + sizeof( float ) ;
904 std::reverse( first, last ) ;
905}
906
907void NRODataset::convertEndian( double &value )
908{
909 char volatile *first = reinterpret_cast<char volatile *>( &value ) ;
910 char volatile *last = first + sizeof( double ) ;
911 std::reverse( first, last ) ;
912}
913
914int NRODataset::readHeader( char *v, int size )
915{
916 if ( (int)( fread( v, 1, size, fp_ ) ) != size ) {
917 return -1 ;
918 }
919 return 0 ;
920}
921
922int NRODataset::readHeader( int &v, int b )
923{
924 if ( fread( &v, 1, sizeof(int), fp_ ) != sizeof(int) ) {
925 return -1 ;
926 }
927
928 if ( b == 0 )
929 convertEndian( v ) ;
930
931 return 0 ;
932}
933
934int NRODataset::readHeader( float &v, int b )
935{
936 if ( fread( &v, 1, sizeof(float), fp_ ) != sizeof(float) ) {
937 return -1 ;
938 }
939
940 if ( b == 0 )
941 convertEndian( v ) ;
942
943 return 0 ;
944}
945
946int NRODataset::readHeader( double &v, int b )
947{
948 if ( fread( &v, 1, sizeof(double), fp_ ) != sizeof(double) ) {
949 return -1 ;
950 }
951
952 if ( b == 0 )
953 convertEndian( v ) ;
954
955 return 0 ;
956}
957
[2766]958void NRODataset::convertEndian( NRODataRecord &r )
[1757]959{
[2766]960 convertEndian( r.ISCAN ) ;
961 convertEndian( r.DSCX ) ;
962 convertEndian( r.DSCY ) ;
963 convertEndian( r.SCX ) ;
964 convertEndian( r.SCY ) ;
965 convertEndian( r.PAZ ) ;
966 convertEndian( r.PEL ) ;
967 convertEndian( r.RAZ ) ;
968 convertEndian( r.REL ) ;
969 convertEndian( r.XX ) ;
970 convertEndian( r.YY ) ;
971 convertEndian( r.TEMP ) ;
972 convertEndian( r.PATM ) ;
973 convertEndian( r.PH2O ) ;
974 convertEndian( r.VWIND ) ;
975 convertEndian( r.DWIND ) ;
976 convertEndian( r.TAU ) ;
977 convertEndian( r.TSYS ) ;
978 convertEndian( r.BATM ) ;
979 convertEndian( r.LINE ) ;
[1757]980 for ( int i = 0 ; i < 4 ; i++ )
[2766]981 convertEndian( r.IDMY1[i] ) ;
982 convertEndian( r.VRAD ) ;
983 convertEndian( r.FREQ0 ) ;
984 convertEndian( r.FQTRK ) ;
985 convertEndian( r.FQIF1 ) ;
986 convertEndian( r.ALCV ) ;
[1757]987 for ( int i = 0 ; i < 2 ; i++ )
988 for ( int j = 0 ; j < 2 ; j++ )
[2766]989 convertEndian( r.OFFCD[i][j] ) ;
990 convertEndian( r.IDMY0 ) ;
991 convertEndian( r.IDMY2 ) ;
992 convertEndian( r.DPFRQ ) ;
993 convertEndian( r.SFCTR ) ;
994 convertEndian( r.ADOFF ) ;
[1757]995}
996
997void NRODataset::releaseRecord()
998{
[2766]999 if ( !record_.null() ) {
[1757]1000 record_ = NULL ;
1001 }
1002 dataid_ = -1 ;
1003}
1004
1005// Get specified scan
1006NRODataRecord *NRODataset::getRecord( int i )
1007{
1008 // DEBUG
1009 //cout << "NRODataset::getRecord() Start " << i << endl ;
1010 //
1011 if ( i < 0 || i >= rowNum_ ) {
[2643]1012 LogIO os( LogOrigin( "NRODataset", "getRecord()", WHERE ) ) ;
[1757]1013 //cerr << "NRODataset::getRecord() data index out of range." << endl ;
1014 os << LogIO::SEVERE << "data index " << i << " out of range. return NULL." << LogIO::POST ;
1015 return NULL ;
1016 }
1017
1018 if ( i == dataid_ ) {
[2766]1019 return &(*record_) ;
[1757]1020 }
1021
1022 // DEBUG
1023 //cout << "NRODataset::getData() Get new dataset" << endl ;
1024 //
1025 // read data
1026 int status = fillRecord( i ) ;
1027 if ( status == 0 ) {
1028 dataid_ = i ;
1029 }
1030 else {
[2643]1031 LogIO os( LogOrigin( "NRODataset", "getRecord()", WHERE ) ) ;
[1757]1032 //cerr << "NRODataset::getRecord() error while reading data " << i << endl ;
[2777]1033 os << LogIO::SEVERE << "error while reading data " << i << ". return NULL." << LogIO::EXCEPTION ;
[1757]1034 dataid_ = -1 ;
1035 return NULL ;
1036 }
1037
[2766]1038 return &(*record_) ;
[1757]1039}
1040
1041int NRODataset::fillRecord( int i )
1042{
1043 int status = 0 ;
1044
1045 status = open() ;
1046 if ( status != 0 )
1047 return status ;
1048
1049
1050 // fill NRODataset
[2781]1051 long offset = getDataSize() + scanLen_ * i ;
[1757]1052 // DEBUG
1053 //cout << "NRODataset::fillRecord() offset (header) = " << offset << endl ;
1054 //cout << "NRODataset::fillRecord() sizeof(NRODataRecord) = " << sizeof( NRODataRecord ) << " byte" << endl ;
1055 fseek( fp_, offset, SEEK_SET ) ;
[2766]1056 if ( (int)fread( &(*record_), 1, SCAN_HEADER_SIZE, fp_ ) != SCAN_HEADER_SIZE ) {
[1757]1057 //cerr << "Failed to read scan header: " << i << endl ;
[2643]1058 LogIO os( LogOrigin( "NRODataset", "fillRecord()", WHERE ) ) ;
[1757]1059 os << LogIO::SEVERE << "Failed to read scan header for " << i << "th row." << LogIO::POST ;
1060 return -1 ;
1061 }
[2765]1062 if ( (int)fread( &(*record_->LDATA), 1, dataLen_, fp_ ) != dataLen_ ) {
[1757]1063 //cerr << "Failed to read spectral data: " << i << endl ;
[2643]1064 LogIO os( LogOrigin( "NRODataset", "fillRecord()", WHERE ) ) ;
[1757]1065 os << LogIO::SEVERE << "Failed to read spectral data for " << i << "th row." << LogIO::POST ;
1066 return -1 ;
1067 }
1068
1069 if ( same_ == 0 ) {
[2766]1070 convertEndian( *record_ ) ;
[1757]1071 }
1072
1073 // DWIND unit conversion (deg -> rad)
1074 record_->DWIND = record_->DWIND * M_PI / 180.0 ;
1075
1076 return status ;
1077}
1078
1079// open
1080int NRODataset::open()
1081{
1082 int status = 0 ;
1083
1084 if ( fp_ == NULL ) {
1085 if ( (fp_ = fopen( filename_.c_str(), "rb" )) == NULL )
1086 status = -1 ;
1087 else
1088 status = 0 ;
1089 }
1090
1091 return status ;
1092}
1093
1094// close
1095void NRODataset::close()
1096{
1097 // DEBUG
1098 //cout << "NRODataset::close() close file" << endl ;
1099 //
1100 if ( fp_ != NULL )
1101 fclose( fp_ ) ;
1102 fp_ = NULL ;
1103}
1104
1105// get spectrum
1106vector< vector<double> > NRODataset::getSpectrum()
1107{
[2289]1108 vector< vector<double> > spec(rowNum_);
[1757]1109
1110 for ( int i = 0 ; i < rowNum_ ; i++ ) {
[2289]1111 spec[i] = getSpectrum( i ) ;
[1757]1112 }
1113
1114 return spec ;
1115}
1116
1117vector<double> NRODataset::getSpectrum( int i )
1118{
1119 // DEBUG
1120 //cout << "NRODataset::getSpectrum() start process (" << i << ")" << endl ;
1121 //
1122 // size of spectrum is not chmax_ but dataset_->getNCH() after binding
[2289]1123 const int nchan = NUMCH ;
[2643]1124 vector<double> spec( chmax_ ) ; // spectrum "before" binding
[1757]1125 // DEBUG
1126 //cout << "NRODataset::getSpectrum() nchan = " << nchan << " chmax_ = " << chmax_ << endl ;
1127 //
1128
[2766]1129 const NRODataRecord *record = getRecord( i ) ;
[1757]1130
[2289]1131 const int bit = IBIT ; // fixed to 12 bit
[1757]1132 double scale = record->SFCTR ;
1133 // DEBUG
1134 //cout << "NRODataset::getSpectrum() scale = " << scale << endl ;
1135 //
1136 double offset = record->ADOFF ;
1137 // DEBUG
1138 //cout << "NRODataset::getSpectrum() offset = " << offset << endl ;
1139 //
1140 if ( ( scale == 0.0 ) && ( offset == 0.0 ) ) {
1141 //cerr << "NRODataset::getSpectrum() zero spectrum (" << i << ")" << endl ;
[2643]1142 LogIO os( LogOrigin("NRODataset","getSpectrum",WHERE) ) ;
1143 os << LogIO::WARN << "zero spectrum for row " << i << LogIO::POST ;
[2748]1144 if ( spec.size() != (unsigned int)nchan )
[2643]1145 spec.resize( nchan ) ;
1146 for ( vector<double>::iterator i = spec.begin() ;
1147 i != spec.end() ; i++ )
1148 *i = 0.0 ;
1149 return spec ;
[1757]1150 }
[2765]1151 unsigned char *cdata = (unsigned char *)&(*record->LDATA) ;
[1757]1152 vector<double> mscale = MLTSCF ;
1153 double dscale = mscale[getIndex( i )] ;
1154 int cbind = CHBIND ;
1155 int chmin = CHMIN ;
1156
[2643]1157 // char -> int -> double
1158 vector<double>::iterator iter = spec.begin() ;
[2289]1159
1160 static const int shift_right[] = {
1161 4, 0
1162 };
1163 static const int start_pos[] = {
1164 0, 1
1165 };
1166 static const int incr[] = {
1167 0, 3
1168 };
[1757]1169 int j = 0 ;
1170 for ( int i = 0 ; i < chmax_ ; i++ ) {
[2643]1171 // char -> int
[2289]1172 int ivalue = 0 ;
[1757]1173 if ( bit == 12 ) { // 12 bit qunatization
[2643]1174 const int ialt = i & 1 ;
1175 const int idx = j + start_pos[ialt];
[2289]1176 const unsigned tmp = unsigned(cdata[idx]) << 8 | cdata[idx + 1];
[2643]1177 ivalue = int((tmp >> shift_right[ialt]) & 0xFFF);
1178 j += incr[ialt];
[2289]1179 }
[1757]1180
[2643]1181 if ( ( ivalue < 0 ) || ( ivalue > 4096 ) ) {
[1757]1182 //cerr << "NRODataset::getSpectrum() ispec[" << i << "] is out of range" << endl ;
[2643]1183 LogIO os( LogOrigin( "NRODataset", "getSpectrum", WHERE ) ) ;
1184 os << LogIO::SEVERE << "ivalue for row " << i << " is out of range" << LogIO::EXCEPTION ;
[2748]1185 if ( spec.size() != (unsigned int)nchan )
[2643]1186 spec.resize( nchan ) ;
1187 for ( vector<double>::iterator i = spec.begin() ;
1188 i != spec.end() ; i++ )
1189 *i = 0.0 ;
1190 return spec ;
[1757]1191 }
1192 // DEBUG
1193 //cout << "NRODataset::getSpectrum() ispec[" << i << "] = " << ispec[i] << endl ;
1194 //
1195
[2643]1196 // int -> double
1197 *iter = (double)( ivalue * scale + offset ) * dscale ;
[1757]1198 // DEBUG
[2643]1199 //cout << "NRODataset::getSpectrum() spec[" << i << "] = " << *iter << endl ;
[1757]1200 //
[2643]1201 iter++ ;
[1757]1202 }
1203
[2643]1204 // channel binding if necessary
[1757]1205 if ( cbind != 1 ) {
[2643]1206 iter = spec.begin() ;
1207 advance( iter, chmin ) ;
1208 vector<double>::iterator iter2 = spec.begin() ;
[1757]1209 for ( int i = 0 ; i < nchan ; i++ ) {
[2643]1210 double sum0 = 0 ;
1211 double sum1 = 0 ;
1212 for ( int j = 0 ; j < cbind ; j++ ) {
1213 sum0 += *iter ;
1214 sum1 += 1.0 ;
1215 iter++ ;
[1757]1216 }
[2643]1217 *iter2 = sum0 / sum1 ;
1218 iter2++ ;
[1757]1219 // DEBUG
1220 //cout << "NRODataset::getSpectrum() bspec[" << i << "] = " << bspec[i] << endl ;
1221 //
1222 }
[2643]1223 spec.resize( nchan ) ;
[1757]1224 }
1225
1226 // DEBUG
1227 //cout << "NRODataset::getSpectrum() end process" << endl ;
1228 //
1229
[2643]1230 return spec ;
[1757]1231}
1232
1233int NRODataset::getIndex( int irow )
1234{
1235 // DEBUG
1236 //cout << "NRODataset::getIndex() start" << endl ;
1237 //
[2766]1238 const NRODataRecord *record = getRecord( irow ) ;
[2777]1239
[2766]1240 const string str = record->ARRYT ;
[1757]1241 // DEBUG
1242 //cout << "NRODataset::getIndex() str = " << str << endl ;
1243 //
[2777]1244 int index = (int)getArrayId(str);
[1757]1245 // DEBUG
[2777]1246 //cout << "NRODataset::getIndex() irow = " << irow << "str = " << str << " index = " << index << endl ;
[1757]1247 //
1248
1249 // DEBUG
1250 //cout << "NRODataset::getIndex() end" << endl ;
1251 //
1252 return index ;
1253}
1254
1255int NRODataset::getPolarizationNum()
1256{
1257 // DEBUG
1258 //cout << "NRODataset::getPolarizationNum() start process" << endl ;
1259 //
[2777]1260 int npol = 1;
1261 Regex reRx2("(.*V|H20ch2)$");
1262 Regex reRx1("(.*H|H20ch1)$");
1263 Bool match1 = false;
1264 Bool match2 = false;
1265 for (int i = 0; i < arrayMax(); i++) {
[2778]1266 //cout << "RX[" << i << "]=" << RX[i] << endl;
[2777]1267 if (!match1) {
1268 match1 = (reRx1.match(RX[i].c_str(), RX[i].size()) != String::npos);
[1757]1269 }
[2777]1270 if (!match2) {
1271 match2 = (reRx2.match(RX[i].c_str(), RX[i].size()) != String::npos);
[1757]1272 }
1273 }
1274
[2777]1275 if (match1 && match2)
1276 npol = 2;
[1757]1277
[2777]1278 //cout << "npol = " << npol << endl;
1279
[1757]1280 // DEBUG
1281 //cout << "NRODataset::getPolarizationNum() end process" << endl ;
1282 //
1283
1284 return npol ;
1285}
1286
1287vector<double> NRODataset::getStartIntTime()
1288{
1289 vector<double> times ;
1290 for ( int i = 0 ; i < rowNum_ ; i++ ) {
1291 times.push_back( getStartIntTime( i ) ) ;
1292 }
1293 return times ;
1294}
1295
1296double NRODataset::getStartIntTime( int i )
1297{
[2766]1298 const NRODataRecord *record = getRecord( i ) ;
[1757]1299
[2766]1300 const char *t = record->LAVST ;
[1757]1301 return getMJD( t ) ;
1302}
1303
[2766]1304double NRODataset::getMJD( const char *time )
[1757]1305{
1306 // TODO: should be checked which time zone the time depends on
1307 // 2008/11/14 Takeshi Nakazato
1308 string strStartTime( time ) ;
1309 string strYear = strStartTime.substr( 0, 4 ) ;
1310 string strMonth = strStartTime.substr( 4, 2 ) ;
1311 string strDay = strStartTime.substr( 6, 2 ) ;
1312 string strHour = strStartTime.substr( 8, 2 ) ;
1313 string strMinute = strStartTime.substr( 10, 2 ) ;
1314 string strSecond = strStartTime.substr( 12, strStartTime.size() - 12 ) ;
1315 unsigned int year = atoi( strYear.c_str() ) ;
1316 unsigned int month = atoi( strMonth.c_str() ) ;
1317 unsigned int day = atoi( strDay.c_str() ) ;
1318 unsigned int hour = atoi( strHour.c_str() ) ;
1319 unsigned int minute = atoi( strMinute.c_str() ) ;
1320 double second = atof( strSecond.c_str() ) ;
1321 Time t( year, month, day, hour, minute, second ) ;
1322
1323 return t.modifiedJulianDay() ;
1324}
1325
[2156]1326double NRODataset::getScanTime( int i )
1327{
1328 double startTime = getStartIntTime( i ) ;
1329 double interval = getIPTIM() / 86400.0 ; // [sec]->[day]
1330 return startTime+0.5*interval ;
1331}
1332
[1757]1333vector<bool> NRODataset::getIFs()
1334{
1335 vector<bool> v ;
1336 vector< vector<double> > fref ;
1337 vector< vector<double> > chcal = CHCAL ;
1338 vector<double> f0cal = F0CAL ;
1339 vector<double> beres = BERES ;
1340 for ( int i = 0 ; i < rowNum_ ; i++ ) {
1341 vector<double> f( 4, 0 ) ;
1342 uInt index = getIndex( i ) ;
1343 f[0] = chcal[index][0] ;
1344 f[1] = f0cal[index] ;
1345 f[2] = beres[index] ;
1346 if ( f[0] != 0. ) {
1347 f[1] = f[1] - f[0] * f[2] ;
1348 }
[2766]1349 const NRODataRecord *record = getRecord( i ) ;
[1757]1350 f[3] = record->FREQ0 ;
1351 if ( v.size() == 0 ) {
1352 v.push_back( True ) ;
1353 fref.push_back( f ) ;
1354 }
1355 else {
1356 bool b = true ;
1357 int fsize = fref.size() ;
1358 for ( int j = 0 ; j < fsize ; j++ ) {
1359 if ( fref[j][1] == f[1] && fref[j][2] == f[2] && fref[j][3] == f[3] ) {
1360 b = false ;
1361 }
1362 }
1363 if ( b ) {
1364 v.push_back( True ) ;
1365 fref.push_back( f ) ;
1366 }
1367 }
1368 }
1369
1370
1371 // DEBUG
1372 //cout << "NRODataset::getIFs() number of IF is " << v.size() << endl ;
1373 //
1374
1375 return v ;
1376}
1377
1378vector<double> NRODataset::getFrequencies( int i )
1379{
1380 // return value
1381 // v[0] reference channel
1382 // v[1] reference frequency
1383 // v[2] frequency increment
1384 vector<double> v( 3, 0.0 ) ;
1385
[2766]1386 const NRODataRecord *record = getRecord( i ) ;
[1757]1387 string arryt = string( record->ARRYT ) ;
1388 uInt ib = getArrayId( arryt ) ;
[2202]1389 string rxname = getRX()[0] ;
1390 string key = arryt ;
1391 if ( rxname.find("MULT2") != string::npos )
1392 key = "BEARS" ;
[1757]1393
[2202]1394 if ( frec_.isDefined( key ) ) {
[2198]1395 // frequency for the array is already calculated
[2202]1396 Vector<Double> f = frec_.asArrayDouble( key ) ;
[2198]1397 Double *f_p = f.data() ;
1398 for ( int i = 0 ; i < 3 ; i++ )
1399 v[i] = (double)(f_p[i]) ;
1400 return v ;
1401 }
1402
1403 //int ia = -1 ;
[1757]1404 bool isAOS = false ;
1405 //cout << "NRODataset::getFrequencies() record->ARRYT=" << record->ARRYT << endl ;
1406 //cout << "NRODataset::getFrequencies() ib = " << ib << endl ;
1407
[2201]1408 if ( arryt[0] == 'W' || arryt[0] == 'U' || arryt[0] == 'H' )
[1757]1409 isAOS = true ;
1410
[2198]1411 Bool isUSB ;
[1757]1412 if ( record->FQIF1 > 0 )
[2198]1413 isUSB = True ; // USB
[1757]1414 else
[2198]1415 isUSB = False ; // LSB
[1757]1416
1417 int ivdef = -1 ;
1418 if ( (getVDEF()).compare( 0, 3, "RAD" ) == 0 )
1419 ivdef = 0 ;
1420 else if ( (getVDEF()).compare( 0, 3, "OPT" ) == 0 )
1421 ivdef = 1 ;
1422 // DEBUG
1423 //cout << "NRODataset::getFrequencies() ivdef = " << ivdef << endl ;
1424 //
1425 double vel = getURVEL() + record->VRAD ;
1426 double cvel = 2.99792458e8 ; // speed of light [m/s]
1427 double fq0 = record->FREQ0 ;
1428 //double fq0 = record->FQTRK ;
1429
1430 int ncal = getNFCAL()[ib] ;
1431 double cw = 0.0 ;
1432 vector<double> fqcal = getFQCAL()[ib] ;
1433 vector<double> chcal = getCHCAL()[ib] ;
[2198]1434 double f0cal = getF0CAL()[ib] ;
1435 Vector<Double> freqs( ncal, fq0-f0cal ) ;
[1757]1436
[2198]1437 double factor = vel / cvel ;
1438 if ( ivdef == 0 )
1439 factor = 1.0 / ( 1.0 - factor ) ;
[1757]1440 for ( int ii = 0 ; ii < ncal ; ii++ ) {
[2198]1441 freqs[ii] += fqcal[ii] ;
1442 if ( ivdef == 0 ) {
1443 freqs[ii] = freqs[ii] * factor + record->FQTRK * ( 1.0 - factor ) ;
[1757]1444 }
[2198]1445 else if ( ivdef == 1 ) {
1446 freqs[ii] = freqs[ii] * ( 1.0 + factor ) - record->FQTRK * factor ;
1447 }
1448
1449 //ofstream ofs("freqs.txt",ios::out|ios::app) ;
1450 //ofs << setprecision(16) ;
1451 //ofs << i << " " << record->ARRYT << " " << chcal[ii] << " " << freqs[ii] << " " << record->ISCAN << " " << fqcal[ii] << " " << f0cal << " " << record->FQTRK << " " << vel << endl ;
1452 //ofs.close() ;
1453
[1757]1454 }
1455
1456 if ( isAOS ) {
1457 // regridding
1458 while ( ncal < (int)chcal.size() ) {
1459 chcal.pop_back() ;
1460 }
1461 Vector<Double> xin( chcal ) ;
1462 Vector<Double> yin( freqs ) ;
1463 int nchan = getNUMCH() ;
1464 Vector<Double> xout( nchan ) ;
1465 indgen( xout ) ;
1466 Vector<Double> yout ;
1467 InterpolateArray1D<Double, Double>::interpolate( yout, xout, xin, yin, InterpolateArray1D<Double,Double>::cubic ) ;
1468 Double bw = abs( yout[nchan-1] - yout[0] ) ;
1469 bw += 0.5 * abs( yout[nchan-1] - yout[nchan-2] + yout[1] - yout[0] ) ;
1470 Double dz = bw / (Double) nchan ;
1471 if ( yout[0] > yout[1] )
1472 dz = - dz ;
1473 v[0] = 0 ;
1474 v[1] = yout[0] ;
1475 v[2] = dz ;
1476 }
1477 else {
[2198]1478
[2212]1479 cw = ( freqs[1] - freqs[0] )
1480 / ( chcal[1] - chcal[0] ) ;
1481
1482 if ( isUSB ) {
1483 // channel frequency inversion
[2198]1484 cw *= -1.0 ;
[2212]1485 Double tmp = freqs[1] ;
1486 freqs[1] = freqs[0] ;
1487 freqs[0] = tmp ;
1488 }
[1757]1489
1490 v[0] = chcal[0] - 1 ; // 0-base
1491 v[1] = freqs[0] ;
1492 v[2] = cw ;
1493 }
1494
[2198]1495 if ( refFreq_[ib] == 0.0 )
[1868]1496 refFreq_[ib] = v[1] ;
1497
[2198]1498 // register frequency setting to Record
1499 Vector<Double> f( v ) ;
[2202]1500 frec_.define( key, f ) ;
[2198]1501
[1757]1502 return v ;
1503}
1504
1505uInt NRODataset::getArrayId( string type )
1506{
1507 string sbeamno = type.substr( 1, type.size()-1 ) ;
1508 uInt ib = atoi( sbeamno.c_str() ) - 1 ;
1509 return ib ;
1510}
1511
[2777]1512uInt NRODataset::getSortedArrayId( string type )
1513{
1514 uInt index = 0;
1515 while (arrayNames_[index] != type && index < (uInt)ARYNM)
1516 ++index;
1517 return index;
1518}
1519
[1757]1520void NRODataset::show()
1521{
1522 LogIO os( LogOrigin( "NRODataset", "show()", WHERE ) ) ;
1523
1524 os << LogIO::NORMAL << "------------------------------------------------------------" << endl ;
1525 os << LogIO::NORMAL << "Number of scan = " << scanNum_ << endl ;
1526 os << LogIO::NORMAL << "Number of data record = " << rowNum_ << endl ;
1527 os << LogIO::NORMAL << "Length of data record = " << scanLen_ << " bytes" << endl ;
1528 os << LogIO::NORMAL << "Allocated memory for spectral data = " << dataLen_ << " bytes" << endl ;
1529 os << LogIO::NORMAL << "Max number of channel = " << chmax_ << endl ;
1530 os << LogIO::NORMAL << "------------------------------------------------------------" << endl ;
1531 os.post() ;
1532
1533}
[1868]1534
1535double NRODataset::toLSR( double v, double t, double x, double y )
1536{
1537 double vlsr ;
1538
1539 // get epoch
1540 double tcent = t + 0.5*getIPTIM()/86400.0 ;
1541 MEpoch me( Quantity( tcent, "d" ), MEpoch::UTC ) ;
1542
1543 // get antenna position
1544 MPosition mp ;
1545 if ( SITE.find( "45" ) != string::npos ) {
1546 // 45m telescope
1547 Double posx = -3.8710235e6 ;
1548 Double posy = 3.4281068e6 ;
1549 Double posz = 3.7240395e6 ;
1550 mp = MPosition( MVPosition( posx, posy, posz ),
1551 MPosition::ITRF ) ;
1552 }
1553 else {
1554 // ASTE
1555 Vector<Double> pos( 2 ) ;
1556 pos[0] = -67.7031 ;
1557 pos[1] = -22.9717 ;
1558 Double sitealt = 4800.0 ;
1559 mp = MPosition( MVPosition( Quantity( sitealt, "m" ),
1560 Quantum< Vector<Double> >( pos, "deg" ) ),
1561 MPosition::WGS84 ) ;
1562 }
1563
1564 // get direction
1565 MDirection md ;
1566 if ( SCNCD == 0 ) {
1567 // RADEC
1568 if ( EPOCH == "B1950" ) {
1569 md = MDirection( Quantity( Double(x), "rad" ), Quantity( Double(y), "rad" ),
1570 MDirection::B1950 ) ;
1571 }
1572 else {
1573 md = MDirection( Quantity( Double(x), "rad" ), Quantity( Double(y), "rad" ),
1574 MDirection::J2000 ) ;
1575 }
1576 }
1577 else if ( SCNCD == 1 ) {
1578 // LB
1579 md = MDirection( Quantity( Double(x), "rad" ), Quantity( Double(y), "rad" ),
1580 MDirection::GALACTIC ) ;
1581 }
1582 else {
1583 // AZEL
1584 md = MDirection( Quantity( Double(x), "rad" ), Quantity( Double(y), "rad" ),
1585 MDirection::AZEL ) ;
1586 }
1587
1588 // to LSR
1589 MeasFrame mf( me, mp, md ) ;
1590 MFrequency::Convert tolsr( MFrequency::TOPO, MFrequency::Ref( MFrequency::LSRK, mf ) ) ;
1591 vlsr = (double)(tolsr( Double(v) ).get( "Hz" ).getValue()) ;
1592
1593 return vlsr ;
1594}
[2434]1595
1596uInt NRODataset::getPolNo( int i )
1597{
1598 int idx = getIndex( i ) ;
1599// cout << "HORN[" << idx << "]=" << HORN[idx]
1600// << ", RX[" << idx << "]=" << RX[idx] << endl ;
[2748]1601 return polNoFromRX( RX[idx] ) ;
[2434]1602}
1603
[2748]1604uInt NRODataset::polNoFromRX( const string &rx )
[2434]1605{
1606 uInt polno = 0 ;
[2748]1607 // 2013/01/23 TN
1608 // In NRO 45m telescope, naming convension for dual-polarization
1609 // receiver is as follows:
[2434]1610 //
[2748]1611 // xxxH for horizontal component,
1612 // xxxV for vertical component.
[2434]1613 //
[2748]1614 // Exception is H20ch1/ch2.
1615 // Here, POLNO is assigned as follows:
1616 //
1617 // POLNO=0: xxxH or H20ch1
1618 // 1: xxxV or H20ch2
1619 //
1620 // For others, POLNO is always 0.
1621 String rxString(rx);
1622 rxString.trim();
1623 //cout << "rx='" << rxString << "' (size " << rxString.size() << ")" << endl;
1624 Regex reRx("(.*V|H20ch2)$");
1625 if (reRx.match(rxString.c_str(), rxString.size()) != String::npos) {
1626 //cout << "match!" << endl;
1627 polno = 1;
1628 }
[2434]1629 return polno ;
1630}
[2777]1631
1632void NRODataset::initArray()
1633{
1634 if (ARYNM <= 0)
1635 throw AipsError("ARYNM must be greater than zero.");
1636
1637 int numArray = 0;
1638 arrayNames_.resize(ARYNM);
1639 for (int irow = 0; numArray < ARYNM && irow < rowNum_; irow++) {
[2779]1640 //cout << "irow " << irow << endl;
[2777]1641 const NRODataRecord *record = getRecord( irow ) ;
1642 const string str = record->ARRYT ;
1643 if (find(arrayNames_.begin(), arrayNames_.end(), str) == arrayNames_.end()) {
1644 arrayNames_[numArray] = str;
[2779]1645 //cout << "arrayNames_[" << numArray << "]=" << str << endl;
[2777]1646 ++numArray;
1647 }
1648 }
[2779]1649 //cout << "numArray=" << numArray << endl;
[2777]1650}
[2781]1651
1652int NRODataset::getScanNum()
1653{
1654 long offset = getDataSize() + scanLen_ * NSCAN * ARYNM ;
1655 fseek( fp_, offset, SEEK_SET ) ;
1656 // try to read data
1657 fgetc( fp_ ) ;
1658 int eof = feof( fp_ ) ;
1659 //cout << "eof=" << eof << endl;
1660 // reset file pointer
1661 fseek( fp_, 0, SEEK_SET ) ;
1662 return NSCAN + (eof > 0 ? 0 : 1) ;
1663}
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