1 | // |
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2 | // C++ Implimentation: RasterEdgeDetector |
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3 | // |
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4 | // Description: |
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5 | // |
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6 | // |
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7 | // Author: Takeshi Nakazato <takeshi.nakazato@nao.ac.jp>, (C) 2012 |
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8 | // |
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9 | // Copyright: See COPYING file that comes with this distribution |
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10 | // |
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11 | // |
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12 | #include <casa/Arrays/Vector.h> |
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13 | #include <casa/Arrays/ArrayMath.h> |
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14 | #include <casa/Arrays/ArrayIO.h> |
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15 | #include <casa/Containers/Record.h> |
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16 | //#include <casa/Utilities/GenSort.h> |
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17 | |
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18 | #include "RasterEdgeDetector.h" |
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19 | |
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20 | using namespace std ; |
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21 | using namespace casa ; |
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22 | |
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23 | namespace asap { |
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24 | |
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25 | RasterEdgeDetector::RasterEdgeDetector() |
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26 | : EdgeDetector() |
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27 | {} |
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28 | |
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29 | RasterEdgeDetector::~RasterEdgeDetector() |
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30 | {} |
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31 | |
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32 | Vector<uInt> RasterEdgeDetector::detect() |
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33 | { |
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34 | os_.origin(LogOrigin( "RasterEdgeDetector", "detect", WHERE )) ; |
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35 | |
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36 | initDetect() ; |
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37 | |
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38 | detectGap() ; |
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39 | selection() ; |
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40 | |
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41 | os_ << LogIO::DEBUGGING |
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42 | << "Detected " << off_.nelements() << " integrations as OFF" << LogIO::POST ; |
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43 | |
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44 | return off_ ; |
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45 | } |
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46 | |
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47 | void RasterEdgeDetector::parseOption( const Record &option ) |
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48 | { |
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49 | os_.origin(LogOrigin( "RasterEdgeDetector", "parseOption", WHERE )) ; |
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50 | |
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51 | String name = "fraction" ; |
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52 | if ( option.isDefined( name ) ) { |
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53 | if ( option.dataType( name ) == TpString ) { |
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54 | String fstr = option.asString( name ) ; |
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55 | if ( fstr == "auto" ) { |
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56 | fraction_ = -1.0 ; // indicates "auto" |
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57 | } |
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58 | else { |
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59 | // should be "xx%" format |
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60 | fstr.substr(0,fstr.size()-1) ; |
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61 | fraction_ = String::toFloat( fstr ) * 0.01 ; |
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62 | } |
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63 | } |
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64 | else { |
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65 | fraction_ = option.asFloat( name ) ; |
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66 | } |
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67 | } |
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68 | else { |
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69 | fraction_ = 0.1 ; // default is 10% |
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70 | } |
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71 | name = "npts" ; |
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72 | if ( option.isDefined( name ) ) { |
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73 | npts_ = option.asInt( name ) ; |
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74 | } |
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75 | else { |
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76 | npts_ = -1 ; // default is -1 (use fraction_) |
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77 | } |
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78 | |
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79 | os_ << "OPTION SUMMARY: " << endl |
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80 | << " fraction=" << fraction_ << endl |
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81 | << " npts=" << npts_ << LogIO::POST ; |
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82 | } |
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83 | |
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84 | void RasterEdgeDetector::detectGap() |
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85 | { |
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86 | os_.origin(LogOrigin( "RasterEdgeDetector", "detectGap", WHERE )) ; |
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87 | |
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88 | uInt n = time_.nelements() ; |
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89 | Vector<Double> tdiff( n-1 ) ; |
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90 | for ( uInt i = 0 ; i < n-1 ; i++ ) { |
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91 | tdiff[i] = time_[i+1] - time_[i] ; |
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92 | } |
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93 | Double tmed = median( tdiff, False, True, False ) ; |
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94 | Double threshold = tmed * 5.0 ; |
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95 | uInt idx = 0 ; |
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96 | tempuInt_[idx++] = 0 ; |
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97 | for ( uInt i = 0 ; i < n-1 ; i++ ) { |
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98 | if ( tdiff[i] > threshold ) { |
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99 | tempuInt_[idx++] = i+1 ; |
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100 | } |
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101 | } |
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102 | if ( tempuInt_[idx-1] != n ) { |
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103 | tempuInt_[idx++] = n ; |
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104 | } |
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105 | gaplist_ = vectorFromTempStorage( idx ) ; |
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106 | |
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107 | os_ << LogIO::DEBUGGING |
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108 | << "Detected " << gaplist_.nelements() << " time gaps." << LogIO::POST ; |
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109 | } |
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110 | |
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111 | void RasterEdgeDetector::selection() |
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112 | { |
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113 | // os_.origin(LogOrigin( "RasterEdgeDetector", "selection", WHERE )) ; |
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114 | |
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115 | uInt n = gaplist_.nelements() - 1 ; |
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116 | uInt idx = 0 ; |
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117 | for ( uInt i = 0 ; i < n ; i++ ) { |
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118 | uInt start = gaplist_[i] ; |
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119 | uInt end = gaplist_[i+1] ; |
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120 | selectionPerRow( idx, start, end ) ; |
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121 | } |
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122 | off_ = vectorFromTempStorage( idx ) ; |
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123 | //sort( off_, Sort::Ascending, Sort::QuickSort | Sort::NoDuplicates ) ; |
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124 | } |
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125 | |
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126 | void RasterEdgeDetector::selectionPerRow( uInt &idx, |
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127 | const uInt &start, |
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128 | const uint &end ) |
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129 | { |
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130 | // os_.origin(LogOrigin( "RasterEdgeDetector", "selectionPerRow", WHERE )) ; |
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131 | |
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132 | uInt len = end - start ; |
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133 | uInt noff = numOff( len ) ; |
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134 | |
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135 | if ( len > noff * 2 ) { |
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136 | uInt n = start + noff ; |
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137 | for ( uInt i = start ; i < n ; i++ ) { |
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138 | tempuInt_[idx++] = i ; |
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139 | } |
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140 | n = end - noff ; |
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141 | for ( uInt i = n ; i < end ; i++ ) { |
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142 | tempuInt_[idx++] = i ; |
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143 | } |
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144 | } |
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145 | else { |
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146 | // add all elements to off position list |
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147 | for ( uInt i = start ; i < end ; i++ ) { |
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148 | tempuInt_[idx++] = i ; |
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149 | } |
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150 | } |
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151 | } |
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152 | |
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153 | uInt RasterEdgeDetector::numOff( const uInt &n ) |
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154 | { |
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155 | uInt ret = 0 ; |
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156 | if ( npts_ > 0 ) { |
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157 | ret = min( (uInt)npts_, n ) ; |
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158 | } |
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159 | else if ( fraction_ < 0 ) { |
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160 | ret = optimumNumber( n ) ; |
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161 | } |
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162 | else { |
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163 | ret = int( n * fraction_ ) ; |
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164 | } |
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165 | return ((ret > 0) ? ret : 1) ; |
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166 | } |
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167 | |
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168 | uInt RasterEdgeDetector::optimumNumber( const uInt &n ) |
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169 | { |
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170 | return uInt( sqrt( n + 1 ) ) - 1 ; |
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171 | } |
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172 | |
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173 | } // namespace asap |
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