1 | //#---------------------------------------------------------------------------
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2 | //# PKSMS2writer.cc: Class to write Parkes multibeam data to a measurementset.
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3 | //#---------------------------------------------------------------------------
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4 | //# livedata - processing pipeline for single-dish, multibeam spectral data.
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5 | //# Copyright (C) 2000-2009, Australia Telescope National Facility, CSIRO
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6 | //#
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7 | //# This file is part of livedata.
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8 | //#
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9 | //# livedata is free software: you can redistribute it and/or modify it under
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10 | //# the terms of the GNU General Public License as published by the Free
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11 | //# Software Foundation, either version 3 of the License, or (at your option)
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12 | //# any later version.
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13 | //#
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14 | //# livedata is distributed in the hope that it will be useful, but WITHOUT
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15 | //# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
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16 | //# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for
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17 | //# more details.
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18 | //#
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19 | //# You should have received a copy of the GNU General Public License along
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20 | //# with livedata. If not, see <http://www.gnu.org/licenses/>.
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21 | //#
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22 | //# Correspondence concerning livedata may be directed to:
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23 | //# Internet email: mcalabre@atnf.csiro.au
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24 | //# Postal address: Dr. Mark Calabretta
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25 | //# Australia Telescope National Facility, CSIRO
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26 | //# PO Box 76
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27 | //# Epping NSW 1710
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28 | //# AUSTRALIA
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29 | //#
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30 | //# http://www.atnf.csiro.au/computing/software/livedata.html
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31 | //# $Id: PKSMS2writer.cc,v 19.16 2009-09-29 07:33:38 cal103 Exp $
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32 | //#---------------------------------------------------------------------------
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33 |
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34 | #include <atnf/PKSIO/PKSrecord.h>
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35 | #include <atnf/PKSIO/PKSMS2writer.h>
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36 |
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37 | #include <casa/Arrays/ArrayUtil.h>
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38 | #include <casa/Arrays/ArrayMath.h>
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39 | #include <casa/Arrays/ArrayLogical.h>
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40 | #include <casa/Arrays/Cube.h>
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41 | #include <casa/BasicSL/Complex.h>
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42 | #include <casa/BasicSL/Constants.h>
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43 | #include <casa/Quanta/QC.h>
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44 | #include <casa/Logging/LogIO.h>
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45 | #include <measures/Measures/Stokes.h>
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46 | #include <tables/Tables/ArrColDesc.h>
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47 | #include <tables/Tables/IncrementalStMan.h>
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48 | #include <tables/Tables/ScaColDesc.h>
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49 | #include <tables/Tables/SetupNewTab.h>
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50 | #include <tables/Tables/StandardStMan.h>
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51 | #include <tables/Tables/Table.h>
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52 | #include <tables/Tables/TableDesc.h>
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53 | #include <tables/Tables/TiledShapeStMan.h>
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54 |
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55 | // Class name
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56 | const string className = "PKSMS2writer" ;
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57 |
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58 | //------------------------------------------------- PKSMS2writer::PKSMS2writer
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59 |
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60 | // Default constructor.
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61 |
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62 | PKSMS2writer::PKSMS2writer()
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63 | {
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64 | cPKSMS = 0x0;
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65 | }
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66 |
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67 | //------------------------------------------------ PKSMS2writer::~PKSMS2writer
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68 |
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69 | // Destructor.
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70 |
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71 | PKSMS2writer::~PKSMS2writer()
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72 | {
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73 | close();
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74 | }
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75 |
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76 | //------------------------------------------------------- PKSMS2writer::create
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77 |
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78 | // Create the output MS and and write static data.
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79 |
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80 | Int PKSMS2writer::create(
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81 | const String msName,
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82 | const String observer,
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83 | const String project,
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84 | const String antName,
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85 | const Vector<Double> antPosition,
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86 | const String obsMode,
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87 | const String bunit,
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88 | const Float equinox,
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89 | const String dopplerFrame,
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90 | const Vector<uInt> nChan,
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91 | const Vector<uInt> nPol,
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92 | const Vector<Bool> haveXPol,
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93 | const Bool haveBase)
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94 | {
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95 | const string methodName = "create()" ;
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96 | LogIO os( LogOrigin( className, methodName, WHERE ) ) ;
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97 |
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98 | if (cPKSMS) {
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99 | os << LogIO::SEVERE << "Output MS already open, close it first." << LogIO::POST ;
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100 | return 1;
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101 | }
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102 |
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103 | // Open a MS table.
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104 | TableDesc pksDesc = MS::requiredTableDesc();
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105 |
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106 | cNChan.assign(nChan);
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107 | cNPol.assign(nPol);
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108 | cHaveXPol.assign(haveXPol);
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109 |
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110 | Int maxNPol = max(cNPol);
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111 | cGBT = cAPEX = cSMT = cALMA = cATF = False;
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112 |
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113 | String telName = antName;
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114 | // check if it is GBT data
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115 | if (antName.contains("GBT")) {
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116 | cGBT = True;
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117 | }
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118 | else if (antName.contains("APEX")) {
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119 | cAPEX = True;
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120 | }
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121 | else if (antName.contains("HHT") || antName.contains("SMT")) {
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122 | cSMT = True;
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123 | }
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124 | else if (antName.contains("ALMA")) {
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125 | cALMA = True;
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126 | }
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127 | else if (antName.contains("ATF")) {
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128 | cATF = True;
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129 | telName="ATF";
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130 | }
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131 |
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132 | // Add the non-standard CALFCTR column.
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133 | pksDesc.addColumn(ArrayColumnDesc<Float>("CALFCTR", "Calibration factors",
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134 | IPosition(1,maxNPol), ColumnDesc::Direct));
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135 |
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136 | // Add the optional FLOAT_DATA column.
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137 | MS::addColumnToDesc(pksDesc, MS::FLOAT_DATA, 2);
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138 | //pksDesc.rwColumnDesc(MS::columnName(MS::FLOAT_DATA)).rwKeywordSet().
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139 | // define("UNIT", String("Jy"));
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140 | pksDesc.rwColumnDesc(MS::columnName(MS::FLOAT_DATA)).rwKeywordSet().
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141 | define("UNIT", bunit);
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142 | pksDesc.rwColumnDesc(MS::columnName(MS::FLOAT_DATA)).rwKeywordSet().
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143 | define("MEASURE_TYPE", "");
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144 |
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145 | if ((cHaveBase = haveBase)) {
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146 | // Add the non-standard BASELIN and BASESUB columns.
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147 | pksDesc.addColumn(ArrayColumnDesc<Float>("BASELIN", "Linear baseline fit",
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148 | IPosition(2,2,maxNPol), ColumnDesc::Direct));
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149 | pksDesc.addColumn(ArrayColumnDesc<Float>("BASESUB", "Baseline subtracted",
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150 | IPosition(2,24,maxNPol), ColumnDesc::Direct));
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151 | }
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152 |
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153 | // Add the optional DATA column if cross-polarizations are to be recorded.
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154 | if (ntrue(cHaveXPol)) {
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155 | // Add the non-standard XCALFCTR column.
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156 | pksDesc.addColumn(ScalarColumnDesc<Complex>("XCALFCTR",
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157 | "Cross-polarization calibration factor"));
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158 |
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159 | MS::addColumnToDesc(pksDesc, MS::DATA, 2);
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160 | //pksDesc.rwColumnDesc(MS::columnName(MS::DATA)).rwKeywordSet().
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161 | // define("UNIT", "Jy");
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162 | pksDesc.rwColumnDesc(MS::columnName(MS::DATA)).rwKeywordSet().
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163 | define("UNIT", bunit);
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164 | pksDesc.rwColumnDesc(MS::columnName(MS::DATA)).rwKeywordSet().
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165 | define("MEASURE_TYPE", "");
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166 | }
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167 |
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168 | // Define hypercube for the float data (without coordinates).
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169 | pksDesc.defineHypercolumn("TiledData", 3,
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170 | stringToVector(MS::columnName(MS::FLOAT_DATA)));
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171 |
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172 | SetupNewTable newtab(msName, pksDesc, Table::New);
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173 |
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174 | // Set Incremental Storage Manager as the default.
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175 | IncrementalStMan incrStMan("ISMData");
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176 | newtab.bindAll(incrStMan, True);
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177 |
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178 | // Use TiledShapeStMan for the FLOAT_DATA hypercube with tile size 1 MB.
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179 | TiledShapeStMan tiledStMan("TiledData", IPosition(3,1,128,2048));
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180 | newtab.bindColumn(MS::columnName(MS::FLOAT_DATA), tiledStMan);
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181 |
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182 | // Use Standard Storage Manager to handle columns that change for each row.
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183 | StandardStMan stdStMan;
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184 | newtab.bindColumn(MS::columnName(MS::SCAN_NUMBER), stdStMan);
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185 | newtab.bindColumn(MS::columnName(MS::TIME), stdStMan);
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186 | newtab.bindColumn(MS::columnName(MS::SIGMA), stdStMan);
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187 | if (maxNPol > 2) {
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188 | newtab.bindColumn(MS::columnName(MS::DATA), stdStMan);
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189 | }
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190 |
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191 | // Create the measurementset.
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192 | cPKSMS = new MeasurementSet(newtab, 0);
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193 |
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194 | // Create subtables.
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195 | TableDesc antennaDesc = MSAntenna::requiredTableDesc();
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196 | SetupNewTable antennaSetup(cPKSMS->antennaTableName(), antennaDesc,
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197 | Table::New);
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198 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::ANTENNA),
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199 | Table(antennaSetup));
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200 |
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201 | TableDesc dataDescDesc = MSDataDescription::requiredTableDesc();
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202 | SetupNewTable dataDescSetup(cPKSMS->dataDescriptionTableName(), dataDescDesc,
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203 | Table::New);
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204 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::DATA_DESCRIPTION),
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205 | Table(dataDescSetup));
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206 |
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207 | TableDesc dopplerDesc = MSDoppler::requiredTableDesc();
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208 | SetupNewTable dopplerSetup(cPKSMS->dopplerTableName(), dopplerDesc,
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209 | Table::New);
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210 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::DOPPLER),
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211 | Table(dopplerSetup));
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212 |
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213 | TableDesc feedDesc = MSFeed::requiredTableDesc();
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214 | MSFeed::addColumnToDesc(feedDesc, MSFeedEnums::FOCUS_LENGTH);
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215 | SetupNewTable feedSetup(cPKSMS->feedTableName(), feedDesc, Table::New);
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216 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::FEED),
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217 | Table(feedSetup));
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218 |
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219 | TableDesc fieldDesc = MSField::requiredTableDesc();
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220 | SetupNewTable fieldSetup(cPKSMS->fieldTableName(), fieldDesc, Table::New);
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221 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::FIELD),
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222 | Table(fieldSetup));
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223 |
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224 | TableDesc flagCmdDesc = MSFlagCmd::requiredTableDesc();
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225 | SetupNewTable flagCmdSetup(cPKSMS->flagCmdTableName(), flagCmdDesc,
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226 | Table::New);
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227 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::FLAG_CMD),
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228 | Table(flagCmdSetup));
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229 |
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230 | TableDesc historyDesc = MSHistory::requiredTableDesc();
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231 | SetupNewTable historySetup(cPKSMS->historyTableName(), historyDesc,
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232 | Table::New);
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233 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::HISTORY),
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234 | Table(historySetup));
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235 |
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236 | TableDesc observationDesc = MSObservation::requiredTableDesc();
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237 | SetupNewTable observationSetup(cPKSMS->observationTableName(),
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238 | observationDesc, Table::New);
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239 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::OBSERVATION),
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240 | Table(observationSetup));
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241 |
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242 | TableDesc pointingDesc = MSPointing::requiredTableDesc();
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243 | SetupNewTable pointingSetup(cPKSMS->pointingTableName(), pointingDesc,
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244 | Table::New);
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245 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::POINTING),
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246 | Table(pointingSetup));
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247 |
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248 | TableDesc polarizationDesc = MSPolarization::requiredTableDesc();
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249 | SetupNewTable polarizationSetup(cPKSMS->polarizationTableName(),
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250 | polarizationDesc, Table::New);
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251 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::POLARIZATION),
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252 | Table(polarizationSetup));
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253 |
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254 | TableDesc processorDesc = MSProcessor::requiredTableDesc();
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255 | SetupNewTable processorSetup(cPKSMS->processorTableName(), processorDesc,
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256 | Table::New);
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257 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::PROCESSOR),
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258 | Table(processorSetup));
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259 |
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260 | TableDesc sourceDesc = MSSource::requiredTableDesc();
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261 | MSSource::addColumnToDesc(sourceDesc, MSSourceEnums::TRANSITION, 1);
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262 | MSSource::addColumnToDesc(sourceDesc, MSSourceEnums::REST_FREQUENCY,
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263 | 1);
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264 | MSSource::addColumnToDesc(sourceDesc, MSSourceEnums::SYSVEL, 1);
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265 | SetupNewTable sourceSetup(cPKSMS->sourceTableName(), sourceDesc,
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266 | Table::New);
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267 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::SOURCE),
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268 | Table(sourceSetup));
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269 |
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270 | TableDesc spectralWindowDesc = MSSpectralWindow::requiredTableDesc();
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271 | MSSpectralWindow::addColumnToDesc(spectralWindowDesc,
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272 | MSSpectralWindowEnums::DOPPLER_ID);
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273 | SetupNewTable spectralWindowSetup(cPKSMS->spectralWindowTableName(),
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274 | spectralWindowDesc, Table::New);
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275 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::SPECTRAL_WINDOW),
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276 | Table(spectralWindowSetup));
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277 |
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278 | TableDesc stateDesc = MSState::requiredTableDesc();
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279 | SetupNewTable stateSetup(cPKSMS->stateTableName(), stateDesc, Table::New);
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280 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::STATE),
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281 | Table(stateSetup));
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282 |
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283 | TableDesc sysCalDesc = MSSysCal::requiredTableDesc();
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284 | MSSysCal::addColumnToDesc(sysCalDesc, MSSysCalEnums::TCAL, 1);
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285 | MSSysCal::addColumnToDesc(sysCalDesc, MSSysCalEnums::TSYS, 1);
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286 | SetupNewTable sysCalSetup(cPKSMS->sysCalTableName(), sysCalDesc,
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287 | Table::New);
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288 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::SYSCAL),
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289 | Table(sysCalSetup));
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290 |
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291 | TableDesc weatherDesc = MSWeather::requiredTableDesc();
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292 | MSWeather::addColumnToDesc(weatherDesc, MSWeatherEnums::PRESSURE);
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293 | MSWeather::addColumnToDesc(weatherDesc, MSWeatherEnums::REL_HUMIDITY);
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294 | MSWeather::addColumnToDesc(weatherDesc, MSWeatherEnums::TEMPERATURE);
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295 | SetupNewTable weatherSetup(cPKSMS->weatherTableName(), weatherDesc,
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296 | Table::New);
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297 | cPKSMS->rwKeywordSet().defineTable(MS::keywordName(MS::WEATHER),
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298 | Table(weatherSetup));
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299 |
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300 | cPKSMS->initRefs();
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301 |
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302 | // Measurementset subtables.
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303 | cAntenna = cPKSMS->antenna();
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304 | cDataDescription = cPKSMS->dataDescription();
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305 | cDoppler = cPKSMS->doppler();
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306 | cFeed = cPKSMS->feed();
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307 | cField = cPKSMS->field();
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308 | cFlagCmd = cPKSMS->flagCmd();
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309 | cHistory = cPKSMS->history();
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310 | cObservation = cPKSMS->observation();
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311 | cPointing = cPKSMS->pointing();
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312 | cPolarization = cPKSMS->polarization();
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313 | cProcessor = cPKSMS->processor();
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314 | cSource = cPKSMS->source();
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315 | cSpectralWindow = cPKSMS->spectralWindow();
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316 | cState = cPKSMS->state();
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317 | cSysCal = cPKSMS->sysCal();
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318 | cWeather = cPKSMS->weather();
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319 |
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320 | // Measurementset table columns;
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321 | cMSCols = new MSColumns(*cPKSMS);
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322 | cAntennaCols = new MSAntennaColumns(cAntenna);
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323 | cDataDescCols = new MSDataDescColumns(cDataDescription);
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324 | cDopplerCols = new MSDopplerColumns(cDoppler);
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325 | cFeedCols = new MSFeedColumns(cFeed);
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326 | cFieldCols = new MSFieldColumns(cField);
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327 | cFlagCmdCols = new MSFlagCmdColumns(cFlagCmd);
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328 | cHistoryCols = new MSHistoryColumns(cHistory);
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329 | cObservationCols = new MSObservationColumns(cObservation);
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330 | cPointingCols = new MSPointingColumns(cPointing);
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331 | cPolarizationCols = new MSPolarizationColumns(cPolarization);
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332 | cProcessorCols = new MSProcessorColumns(cProcessor);
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333 | cSourceCols = new MSSourceColumns(cSource);
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334 | cSpWindowCols = new MSSpWindowColumns(cSpectralWindow);
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335 | cStateCols = new MSStateColumns(cState);
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336 | cSysCalCols = new MSSysCalColumns(cSysCal);
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337 | cWeatherCols = new MSWeatherColumns(cWeather);
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338 |
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339 | cCalFctrCol = new ArrayColumn<Float>(*cPKSMS, "CALFCTR");
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340 | if (cHaveBase) {
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341 | cBaseLinCol = new ArrayColumn<Float>(*cPKSMS, "BASELIN");
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342 | cBaseSubCol = new ArrayColumn<Float>(*cPKSMS, "BASESUB");
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343 | }
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344 | if (ntrue(cHaveXPol)) {
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345 | cXCalFctrCol = new ScalarColumn<Complex>(*cPKSMS, "XCALFCTR");
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346 | }
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347 |
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348 |
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349 | // Define Measure references.
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350 | Vector<String> flagCat(1, "BAD");
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351 | cMSCols->sigma().rwKeywordSet().define("UNIT", "K");
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352 | cMSCols->flagCategory().rwKeywordSet().define("CATEGORY", flagCat);
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353 |
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354 | String dirref;
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355 | if (equinox == 1950.0f) {
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356 | dirref = "B1950";
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357 | } else {
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358 | dirref = "J2000";
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359 | }
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360 |
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361 | cFieldCols->delayDir().rwKeywordSet().asrwRecord("MEASINFO").
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362 | define("Ref", dirref);
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363 | cFieldCols->phaseDir().rwKeywordSet().asrwRecord("MEASINFO").
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364 | define("Ref", dirref);
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365 | cFieldCols->referenceDir().rwKeywordSet().asrwRecord("MEASINFO").
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366 | define("Ref", dirref);
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367 |
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368 | cPointingCols->direction().rwKeywordSet().asrwRecord("MEASINFO").
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369 | define("Ref", dirref);
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370 | cPointingCols->target().rwKeywordSet().asrwRecord("MEASINFO").
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371 | define("Ref", dirref);
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372 |
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373 | cSourceCols->direction().rwKeywordSet().asrwRecord("MEASINFO").
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374 | define("Ref", dirref);
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375 | cSourceCols->restFrequency().rwKeywordSet().asrwRecord("MEASINFO").
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376 | define("Ref", "REST");
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377 |
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378 | // Translate Doppler frame name.
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379 | if (dopplerFrame == "TOPOCENT") {
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380 | MFrequency::getType(cDopplerFrame, "TOPO");
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381 | } else if (dopplerFrame == "GEOCENTR") {
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382 | MFrequency::getType(cDopplerFrame, "GEO");
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383 | } else if (dopplerFrame == "BARYCENT") {
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384 | MFrequency::getType(cDopplerFrame, "BARY");
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385 | } else if (dopplerFrame == "GALACTOC") {
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386 | MFrequency::getType(cDopplerFrame, "GALACTO");
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387 | } else if (dopplerFrame == "LOCALGRP") {
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388 | MFrequency::getType(cDopplerFrame, "LGROUP");
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389 | } else if (dopplerFrame == "CMBDIPOL") {
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390 | MFrequency::getType(cDopplerFrame, "CMB");
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391 | } else if (dopplerFrame == "SOURCE") {
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392 | MFrequency::getType(cDopplerFrame, "REST");
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393 | } else if (dopplerFrame == "LSRK") {
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394 | MFrequency::getType(cDopplerFrame, "LSRK");
|
---|
395 | }
|
---|
396 |
|
---|
397 |
|
---|
398 | // Store static data.
|
---|
399 | addAntennaEntry(antName, antPosition);
|
---|
400 | addDopplerEntry();
|
---|
401 | addFeedEntry();
|
---|
402 | //addObservationEntry(observer, project);
|
---|
403 | addObservationEntry(observer, project, telName);
|
---|
404 | addProcessorEntry();
|
---|
405 |
|
---|
406 | return 0;
|
---|
407 | }
|
---|
408 |
|
---|
409 | //-------------------------------------------------------- PKSMS2writer::write
|
---|
410 |
|
---|
411 | // Write the next data record.
|
---|
412 |
|
---|
413 | /**
|
---|
414 | Int PKSMS2writer::write(
|
---|
415 | const Int scanNo,
|
---|
416 | const Int cycleNo,
|
---|
417 | const Double mjd,
|
---|
418 | const Double interval,
|
---|
419 | const String fieldName,
|
---|
420 | const String srcName,
|
---|
421 | const Vector<Double> srcDir,
|
---|
422 | const Vector<Double> srcPM,
|
---|
423 | const Double srcVel,
|
---|
424 | const String obsMode,
|
---|
425 | const Int IFno,
|
---|
426 | const Double refFreq,
|
---|
427 | const Double bandwidth,
|
---|
428 | const Double freqInc,
|
---|
429 | //const Double restFreq,
|
---|
430 | const Vector<Double> restFreq,
|
---|
431 | const Vector<Float> tcal,
|
---|
432 | const String tcalTime,
|
---|
433 | const Float azimuth,
|
---|
434 | const Float elevation,
|
---|
435 | const Float parAngle,
|
---|
436 | const Float focusAxi,
|
---|
437 | const Float focusTan,
|
---|
438 | const Float focusRot,
|
---|
439 | const Float temperature,
|
---|
440 | const Float pressure,
|
---|
441 | const Float humidity,
|
---|
442 | const Float windSpeed,
|
---|
443 | const Float windAz,
|
---|
444 | const Int refBeam,
|
---|
445 | const Int beamNo,
|
---|
446 | const Vector<Double> direction,
|
---|
447 | const Vector<Double> scanRate,
|
---|
448 | const Vector<Float> tsys,
|
---|
449 | const Vector<Float> sigma,
|
---|
450 | const Vector<Float> calFctr,
|
---|
451 | const Matrix<Float> baseLin,
|
---|
452 | const Matrix<Float> baseSub,
|
---|
453 | const Matrix<Float> &spectra,
|
---|
454 | const Matrix<uChar> &flagged,
|
---|
455 | const uInt flagrow,
|
---|
456 | const Complex xCalFctr,
|
---|
457 | const Vector<Complex> &xPol)
|
---|
458 | **/
|
---|
459 | Int PKSMS2writer::write(
|
---|
460 | const PKSrecord &pksrec)
|
---|
461 | {
|
---|
462 | // Extend the time range in the OBSERVATION subtable.
|
---|
463 | Vector<Double> timerange(2);
|
---|
464 | cObservationCols->timeRange().get(0, timerange);
|
---|
465 | Double time = pksrec.mjd*86400.0;
|
---|
466 | if (timerange(0) == 0.0) {
|
---|
467 | timerange(0) = time;
|
---|
468 | }
|
---|
469 | timerange(1) = time;
|
---|
470 | cObservationCols->timeRange().put(0, timerange);
|
---|
471 |
|
---|
472 | Int iIF = pksrec.IFno - 1;
|
---|
473 | Int nChan = cNChan(iIF);
|
---|
474 | Int nPol = cNPol(iIF);
|
---|
475 |
|
---|
476 | // IFno is the 1-relative row number in the DATA_DESCRIPTION,
|
---|
477 | // SPECTRAL_WINDOW, and POLARIZATION subtables.
|
---|
478 | if (Int(cDataDescription.nrow()) < pksrec.IFno) {
|
---|
479 | // Add a new entry to each subtable.
|
---|
480 | addDataDescriptionEntry(pksrec.IFno);
|
---|
481 | addSpectralWindowEntry(pksrec.IFno, nChan, pksrec.refFreq,
|
---|
482 | pksrec.bandwidth, pksrec.freqInc);
|
---|
483 | addPolarizationEntry(pksrec.IFno, nPol);
|
---|
484 | }
|
---|
485 |
|
---|
486 | // Find or add the source to the SOURCE subtable.
|
---|
487 | Int srcId = addSourceEntry(pksrec.srcName, pksrec.srcDir, pksrec.srcPM,
|
---|
488 | pksrec.restFreq, pksrec.srcVel);
|
---|
489 |
|
---|
490 | // Find or add the obsMode to the STATE subtable.
|
---|
491 | Int stateId = addStateEntry(pksrec.obsType);
|
---|
492 |
|
---|
493 | // FIELD subtable.
|
---|
494 | //Vector<Double> scanRate(2);
|
---|
495 | //scanRate(0) = pksrec.scanRate(0);
|
---|
496 | //scanRate(1) = pksrec.scanRate(1);
|
---|
497 | Int fieldId = addFieldEntry(pksrec.fieldName, time, pksrec.direction,
|
---|
498 | pksrec.scanRate, srcId);
|
---|
499 |
|
---|
500 | // POINTING subtable.
|
---|
501 | addPointingEntry(time, pksrec.interval, pksrec.fieldName, pksrec.direction,
|
---|
502 | pksrec.scanRate);
|
---|
503 |
|
---|
504 | // SYSCAL subtable.
|
---|
505 | addSysCalEntry(pksrec.beamNo, iIF, time, pksrec.interval, pksrec.tcal,
|
---|
506 | pksrec.tsys, nPol);
|
---|
507 |
|
---|
508 | // Handle weather information.
|
---|
509 | ROScalarColumn<Double> wTime(cWeather, "TIME");
|
---|
510 | Int nWeather = wTime.nrow();
|
---|
511 | if (nWeather == 0 || time > wTime(nWeather-1)) {
|
---|
512 | addWeatherEntry(time, pksrec.interval, pksrec.pressure, pksrec.humidity,
|
---|
513 | pksrec.temperature);
|
---|
514 | }
|
---|
515 |
|
---|
516 |
|
---|
517 | // Extend the main table.
|
---|
518 | cPKSMS->addRow();
|
---|
519 | Int irow = cPKSMS->nrow() - 1;
|
---|
520 |
|
---|
521 | // Keys.
|
---|
522 | cMSCols->time().put(irow, time);
|
---|
523 | cMSCols->antenna1().put(irow, 0);
|
---|
524 | cMSCols->antenna2().put(irow, 0);
|
---|
525 | cMSCols->feed1().put(irow, pksrec.beamNo-1);
|
---|
526 | cMSCols->feed2().put(irow, pksrec.beamNo-1);
|
---|
527 | cMSCols->dataDescId().put(irow, iIF);
|
---|
528 | cMSCols->processorId().put(irow, 0);
|
---|
529 | cMSCols->fieldId().put(irow, fieldId);
|
---|
530 |
|
---|
531 | // Non-key attributes.
|
---|
532 | cMSCols->interval().put(irow, pksrec.interval);
|
---|
533 | cMSCols->exposure().put(irow, pksrec.interval);
|
---|
534 | cMSCols->timeCentroid().put(irow, time);
|
---|
535 | cMSCols->scanNumber().put(irow, pksrec.scanNo);
|
---|
536 | cMSCols->arrayId().put(irow, 0);
|
---|
537 | cMSCols->observationId().put(irow, 0);
|
---|
538 | cMSCols->stateId().put(irow, stateId);
|
---|
539 |
|
---|
540 | Vector<Double> uvw(3, 0.0);
|
---|
541 | cMSCols->uvw().put(irow, uvw);
|
---|
542 |
|
---|
543 | // Baseline fit parameters.
|
---|
544 | if (cHaveBase) {
|
---|
545 | cBaseLinCol->put(irow, pksrec.baseLin);
|
---|
546 |
|
---|
547 | if (pksrec.baseSub.nrow() == 24) {
|
---|
548 | cBaseSubCol->put(irow, pksrec.baseSub);
|
---|
549 |
|
---|
550 | } else {
|
---|
551 | Matrix<Float> tmp(24, 2, 0.0f);
|
---|
552 | for (Int ipol = 0; ipol < nPol; ipol++) {
|
---|
553 | for (uInt j = 0; j < pksrec.baseSub.nrow(); j++) {
|
---|
554 | tmp(j,ipol) = pksrec.baseSub(j,ipol);
|
---|
555 | }
|
---|
556 | }
|
---|
557 | cBaseSubCol->put(irow, tmp);
|
---|
558 | }
|
---|
559 | }
|
---|
560 |
|
---|
561 | // Transpose spectra.
|
---|
562 | Matrix<Float> tmpData(nPol, nChan);
|
---|
563 | Matrix<Bool> tmpFlag(nPol, nChan);
|
---|
564 | for (Int ipol = 0; ipol < nPol; ipol++) {
|
---|
565 | for (Int ichan = 0; ichan < nChan; ichan++) {
|
---|
566 | tmpData(ipol,ichan) = pksrec.spectra(ichan,ipol);
|
---|
567 | tmpFlag(ipol,ichan) = pksrec.flagged(ichan,ipol);
|
---|
568 | }
|
---|
569 | }
|
---|
570 |
|
---|
571 | cCalFctrCol->put(irow, pksrec.calFctr);
|
---|
572 | cMSCols->floatData().put(irow, tmpData);
|
---|
573 | cMSCols->flag().put(irow, tmpFlag);
|
---|
574 |
|
---|
575 | // Cross-polarization spectra.
|
---|
576 | if (cHaveXPol(iIF)) {
|
---|
577 | cXCalFctrCol->put(irow, pksrec.xCalFctr);
|
---|
578 | cMSCols->data().put(irow, pksrec.xPol);
|
---|
579 | }
|
---|
580 |
|
---|
581 | cMSCols->sigma().put(irow, pksrec.sigma);
|
---|
582 |
|
---|
583 | //Vector<Float> weight(1, 1.0f);
|
---|
584 | Vector<Float> weight(nPol, 1.0f);
|
---|
585 | cMSCols->weight().put(irow, weight);
|
---|
586 | //imaging weight
|
---|
587 | //Vector<Float> imagingWeight(nChan);
|
---|
588 | //cMSCols->imagingWeight().put(irow, imagingWeight);
|
---|
589 |
|
---|
590 | // Flag information.
|
---|
591 | Cube<Bool> flags(nPol, nChan, 1, False);
|
---|
592 | //cMSCols->flag().put(irow, flags.xyPlane(0));
|
---|
593 | cMSCols->flagCategory().put(irow, flags);
|
---|
594 | // Row-based flagging info. (True:>0, False:0)
|
---|
595 | cMSCols->flagRow().put(irow, (pksrec.flagrow > 0));
|
---|
596 |
|
---|
597 |
|
---|
598 | return 0;
|
---|
599 | }
|
---|
600 |
|
---|
601 | //-------------------------------------------------------- PKSMS2writer::close
|
---|
602 |
|
---|
603 | // Close the measurementset, flushing all associated tables.
|
---|
604 |
|
---|
605 | void PKSMS2writer::close()
|
---|
606 | {
|
---|
607 | // Delete table column accessors.
|
---|
608 | delete cMSCols; cMSCols=0;
|
---|
609 | delete cAntennaCols; cAntennaCols=0;
|
---|
610 | delete cDataDescCols; cDataDescCols=0;
|
---|
611 | delete cDopplerCols; cDopplerCols=0;
|
---|
612 | delete cFeedCols; cFeedCols=0;
|
---|
613 | delete cFieldCols; cFieldCols=0;
|
---|
614 | delete cFlagCmdCols; cFlagCmdCols=0;
|
---|
615 | delete cHistoryCols; cHistoryCols=0;
|
---|
616 | delete cObservationCols; cObservationCols=0;
|
---|
617 | delete cPointingCols; cPointingCols=0;
|
---|
618 | delete cPolarizationCols; cPolarizationCols=0;
|
---|
619 | delete cProcessorCols; cProcessorCols=0;
|
---|
620 | delete cSourceCols; cSourceCols=0;
|
---|
621 | delete cSpWindowCols; cSpWindowCols=0;
|
---|
622 | delete cStateCols; cStateCols=0;
|
---|
623 | delete cSysCalCols; cSysCalCols=0;
|
---|
624 | delete cWeatherCols; cWeatherCols=0;
|
---|
625 |
|
---|
626 | delete cCalFctrCol; cCalFctrCol=0;
|
---|
627 | if (cHaveBase) {
|
---|
628 | delete cBaseLinCol; cBaseLinCol=0;
|
---|
629 | delete cBaseSubCol; cBaseSubCol=0;
|
---|
630 | }
|
---|
631 | if (ntrue(cHaveXPol)) {
|
---|
632 | delete cXCalFctrCol; cXCalFctrCol=0;
|
---|
633 | }
|
---|
634 |
|
---|
635 | // Release all subtables.
|
---|
636 | cAntenna = MSAntenna();
|
---|
637 | cDataDescription = MSDataDescription();
|
---|
638 | cDoppler = MSDoppler();
|
---|
639 | cFeed = MSFeed();
|
---|
640 | cField = MSField();
|
---|
641 | cFlagCmd = MSFlagCmd();
|
---|
642 | cHistory = MSHistory();
|
---|
643 | cObservation = MSObservation();
|
---|
644 | cPointing = MSPointing();
|
---|
645 | cPolarization = MSPolarization();
|
---|
646 | cProcessor = MSProcessor();
|
---|
647 | cSource = MSSource();
|
---|
648 | cSpectralWindow = MSSpectralWindow();
|
---|
649 | cState = MSState();
|
---|
650 | cSysCal = MSSysCal();
|
---|
651 | cWeather = MSWeather();
|
---|
652 | // Release the main table.
|
---|
653 | delete cPKSMS;
|
---|
654 | cPKSMS=0x0;
|
---|
655 | }
|
---|
656 |
|
---|
657 | //---------------------------------------------- PKSMS2writer::addAntennaEntry
|
---|
658 |
|
---|
659 | // Add an entry to the ANTENNA subtable.
|
---|
660 |
|
---|
661 | Int PKSMS2writer::addAntennaEntry(
|
---|
662 | const String antName,
|
---|
663 | const Vector<Double> &antPosition)
|
---|
664 | {
|
---|
665 | // Extend the ANTENNA subtable.
|
---|
666 | cAntenna.addRow();
|
---|
667 | Int n = cAntenna.nrow() - 1;
|
---|
668 |
|
---|
669 | // do specific things for GBT
|
---|
670 | // Data.
|
---|
671 | // plus some more telescopes
|
---|
672 | cAntennaCols->name().put(n, antName);
|
---|
673 | //cAntennaCols->station().put(n, "ATNF_PARKES");
|
---|
674 | if (cGBT) {
|
---|
675 | cAntennaCols->station().put(n, "GREENBANK");
|
---|
676 | cAntennaCols->dishDiameter().put(n, 110.0);
|
---|
677 | }
|
---|
678 | else if (cAPEX) {
|
---|
679 | cAntennaCols->station().put(n, "CHAJNANTOR");
|
---|
680 | cAntennaCols->dishDiameter().put(n, 12.0);
|
---|
681 | }
|
---|
682 | else if (cALMA) {
|
---|
683 | // this needs to be changed in future...
|
---|
684 | cAntennaCols->station().put(n, "CHAJNANTOR");
|
---|
685 | cAntennaCols->dishDiameter().put(n, 12.0);
|
---|
686 | }
|
---|
687 | else if (cATF) {
|
---|
688 | //pad name for the antenna is static...
|
---|
689 | String stname="unknown";
|
---|
690 | if (antName.contains("DV")) {
|
---|
691 | stname="PAD001";
|
---|
692 | }
|
---|
693 | if (antName.contains("DA")) {
|
---|
694 | stname="PAD002";
|
---|
695 | }
|
---|
696 | cAntennaCols->station().put(n, stname);
|
---|
697 | cAntennaCols->dishDiameter().put(n, 12.0);
|
---|
698 | }
|
---|
699 | else if (cSMT) {
|
---|
700 | cAntennaCols->station().put(n, "MT_GRAHAM");
|
---|
701 | cAntennaCols->dishDiameter().put(n, 10.0);
|
---|
702 | }
|
---|
703 | else {
|
---|
704 | cAntennaCols->station().put(n, "ATNF_PARKES");
|
---|
705 | cAntennaCols->dishDiameter().put(n, 64.0);
|
---|
706 | }
|
---|
707 | cAntennaCols->type().put(n, "GROUND-BASED");
|
---|
708 | cAntennaCols->mount().put(n, "ALT-AZ");
|
---|
709 | cAntennaCols->position().put(n, antPosition);
|
---|
710 | Vector<Double> antOffset(3, 0.0);
|
---|
711 | cAntennaCols->offset().put(n, antOffset);
|
---|
712 | //cAntennaCols->dishDiameter().put(n, 64.0);
|
---|
713 | //if (cGBT) {
|
---|
714 | // cAntennaCols->dishDiameter().put(n, 110.0);
|
---|
715 | //}
|
---|
716 | //else {
|
---|
717 | // cAntennaCols->dishDiameter().put(n, 64.0);
|
---|
718 | //}
|
---|
719 | // Flags.
|
---|
720 | cAntennaCols->flagRow().put(n, False);
|
---|
721 |
|
---|
722 | return n;
|
---|
723 | }
|
---|
724 |
|
---|
725 | //-------------------------------------- PKSMS2writer::addDataDescriptionEntry
|
---|
726 |
|
---|
727 | // Add an entry to the DATA_DESCRIPTION subtable.
|
---|
728 |
|
---|
729 | Int PKSMS2writer::addDataDescriptionEntry(
|
---|
730 | const Int IFno)
|
---|
731 | {
|
---|
732 | // Extend the DATA_DESCRIPTION subtable.
|
---|
733 | while (Int(cDataDescription.nrow()) < IFno) {
|
---|
734 | cDataDescription.addRow(1,True);
|
---|
735 | }
|
---|
736 | Int n = IFno - 1;
|
---|
737 |
|
---|
738 | // Data.
|
---|
739 | cDataDescCols->spectralWindowId().put(n, n);
|
---|
740 | cDataDescCols->polarizationId().put(n, n);
|
---|
741 |
|
---|
742 | // Flags.
|
---|
743 | cDataDescCols->flagRow().put(n, False);
|
---|
744 |
|
---|
745 | return n;
|
---|
746 | }
|
---|
747 |
|
---|
748 | //---------------------------------------------- PKSMS2writer::addDopplerEntry
|
---|
749 |
|
---|
750 | // Add an entry to the DOPPLER subtable.
|
---|
751 |
|
---|
752 | Int PKSMS2writer::addDopplerEntry()
|
---|
753 | {
|
---|
754 | // Extend the DOPPLER subtable.
|
---|
755 | cDoppler.addRow();
|
---|
756 | Int n = cDoppler.nrow() - 1;
|
---|
757 |
|
---|
758 | // Keys.
|
---|
759 | cDopplerCols->dopplerId().put(n, n);
|
---|
760 | cDopplerCols->sourceId().put(n, 0);
|
---|
761 |
|
---|
762 | // Data.
|
---|
763 | cDopplerCols->transitionId().put(n, 0);
|
---|
764 |
|
---|
765 | return n;
|
---|
766 | }
|
---|
767 |
|
---|
768 | //------------------------------------------------- PKSMS2writer::addFeedEntry
|
---|
769 |
|
---|
770 | // Add an entry to the FEED subtable.
|
---|
771 |
|
---|
772 | Int PKSMS2writer::addFeedEntry()
|
---|
773 | {
|
---|
774 | Int n = cFeed.nrow() - 1;
|
---|
775 | for (Int iBeam = 0; iBeam < 13; iBeam++) {
|
---|
776 | // Extend the FEED subtable.
|
---|
777 | cFeed.addRow();
|
---|
778 | n++;
|
---|
779 |
|
---|
780 | // Keys.
|
---|
781 | cFeedCols->antennaId().put(n, cAntenna.nrow()-1);
|
---|
782 | cFeedCols->feedId().put(n, iBeam);
|
---|
783 | cFeedCols->spectralWindowId().put(n, -1);
|
---|
784 | cFeedCols->time().put(n, 0.0);
|
---|
785 | cFeedCols->interval().put(n, -1.0);
|
---|
786 |
|
---|
787 | // Data description.
|
---|
788 | cFeedCols->numReceptors().put(n, 2);
|
---|
789 |
|
---|
790 | // Data.
|
---|
791 | cFeedCols->beamId().put(n, -1);
|
---|
792 |
|
---|
793 | Matrix<Double> beamOffset(2, 2, 0.0);
|
---|
794 | cFeedCols->beamOffset().put(n, beamOffset);
|
---|
795 |
|
---|
796 | cFeedCols->focusLength().put(n, 26.0);
|
---|
797 |
|
---|
798 | Vector<String> polarizationType(2);
|
---|
799 | polarizationType(0) = "X";
|
---|
800 | polarizationType(1) = "Y";
|
---|
801 | cFeedCols->polarizationType().put(n, polarizationType);
|
---|
802 |
|
---|
803 | Matrix<Complex> polResponse(2, 2, Complex(0.0));
|
---|
804 | for (Int i = 0; i < 2; i++) {
|
---|
805 | polResponse(i,i) = Complex(1.0, 0.0);
|
---|
806 | }
|
---|
807 | cFeedCols->polResponse().put(n, polResponse);
|
---|
808 |
|
---|
809 | Vector<Double> position(3, 0.0);
|
---|
810 | cFeedCols->position().put(n, position);
|
---|
811 |
|
---|
812 | Vector<Double> receptorAngle(2, C::pi_4);
|
---|
813 | receptorAngle(1) += C::pi_2;
|
---|
814 | cFeedCols->receptorAngle().put(n, receptorAngle);
|
---|
815 | }
|
---|
816 |
|
---|
817 | return n;
|
---|
818 | }
|
---|
819 |
|
---|
820 | //------------------------------------------------ PKSMS2writer::addFieldEntry
|
---|
821 |
|
---|
822 | // Add an entry to the FIELD subtable.
|
---|
823 |
|
---|
824 | Int PKSMS2writer::addFieldEntry(
|
---|
825 | const String fieldName,
|
---|
826 | const Double time,
|
---|
827 | const Vector<Double> direction,
|
---|
828 | const Vector<Double> scanRate,
|
---|
829 | const Int srcId)
|
---|
830 | {
|
---|
831 |
|
---|
832 | ROScalarColumn<String> fldn(cField, "NAME");
|
---|
833 | ROScalarColumn<Int> sourceid(cField, "SOURCE_ID");
|
---|
834 | Int n;
|
---|
835 | Int nFld = cField.nrow();
|
---|
836 | for (n = 0; n < nFld; n++) {
|
---|
837 | if (fldn(n) == fieldName && sourceid(n) == srcId) {
|
---|
838 | break;
|
---|
839 | }
|
---|
840 | }
|
---|
841 |
|
---|
842 | // Extend the FIELD subtable.
|
---|
843 | if (n == nFld) {
|
---|
844 | cField.addRow();
|
---|
845 | //Int n = cField.nrow() - 1;
|
---|
846 |
|
---|
847 | // Data.
|
---|
848 | cFieldCols->name().put(n, fieldName);
|
---|
849 | if (cGBT) {
|
---|
850 | cFieldCols->code().put(n, " ");
|
---|
851 | }
|
---|
852 | else {
|
---|
853 | cFieldCols->code().put(n, "DRIFT");
|
---|
854 | }
|
---|
855 | cFieldCols->time().put(n, time);
|
---|
856 |
|
---|
857 | //Matrix<Double> track(2, 2);
|
---|
858 | Matrix<Double> track(2, 1);
|
---|
859 | track.column(0) = direction;
|
---|
860 | //track.column(1) = scanRate;
|
---|
861 | cFieldCols->numPoly().put(n, 1);
|
---|
862 | cFieldCols->delayDir().put(n, track);
|
---|
863 | cFieldCols->phaseDir().put(n, track);
|
---|
864 | cFieldCols->referenceDir().put(n, track);
|
---|
865 | cFieldCols->sourceId().put(n, srcId);
|
---|
866 |
|
---|
867 | // Flags.
|
---|
868 | cFieldCols->flagRow().put(n, False);
|
---|
869 | }
|
---|
870 |
|
---|
871 | return n;
|
---|
872 | }
|
---|
873 |
|
---|
874 | //------------------------------------------ PKSMS2writer::addObservationEntry
|
---|
875 |
|
---|
876 | // Add an entry to the OBSERVATION subtable.
|
---|
877 |
|
---|
878 | Int PKSMS2writer::addObservationEntry(
|
---|
879 | const String observer,
|
---|
880 | const String project,
|
---|
881 | const String antName)
|
---|
882 | {
|
---|
883 | // Extend the OBSERVATION subtable.
|
---|
884 | cObservation.addRow();
|
---|
885 | Int n = cObservation.nrow() - 1;
|
---|
886 |
|
---|
887 | // Data.
|
---|
888 | //cObservationCols->telescopeName().put(n, "Parkes");
|
---|
889 | cObservationCols->telescopeName().put(n, antName);
|
---|
890 | Vector<Double> timerange(2, 0.0);
|
---|
891 | cObservationCols->timeRange().put(n, timerange);
|
---|
892 | cObservationCols->observer().put(n, observer);
|
---|
893 | Vector<String> log(1, "none");
|
---|
894 | cObservationCols->log().put(n, log);
|
---|
895 | //cObservationCols->scheduleType().put(n, "ATNF");
|
---|
896 | cObservationCols->scheduleType().put(n, "");
|
---|
897 | Vector<String> schedule(1, "Not available");
|
---|
898 | cObservationCols->schedule().put(n, schedule);
|
---|
899 | cObservationCols->project().put(n, project);
|
---|
900 | cObservationCols->releaseDate().put(n, 0.0);
|
---|
901 |
|
---|
902 | // Flags.
|
---|
903 | cObservationCols->flagRow().put(n, False);
|
---|
904 |
|
---|
905 | return n;
|
---|
906 | }
|
---|
907 |
|
---|
908 | //--------------------------------------------- PKSMS2writer::addPointingEntry
|
---|
909 |
|
---|
910 | // Modified to fill pointing data if the direction is the pointing direction.
|
---|
911 | // So the following comment is no longer true.
|
---|
912 |
|
---|
913 | // Add an entry to the POINTING subtable. This compulsory subtable simply
|
---|
914 | // duplicates information in the FIELD subtable.
|
---|
915 |
|
---|
916 | Int PKSMS2writer::addPointingEntry(
|
---|
917 | const Double time,
|
---|
918 | const Double interval,
|
---|
919 | const String fieldName,
|
---|
920 | const Vector<Double> direction,
|
---|
921 | const Vector<Double> scanRate)
|
---|
922 | {
|
---|
923 |
|
---|
924 | ROScalarColumn<Double> tms(cPointing, "TIME");
|
---|
925 | Int n;
|
---|
926 | Int ntm = cPointing.nrow();
|
---|
927 | for (n = 0; n < ntm; n++) {
|
---|
928 | if (tms(n) == time) {
|
---|
929 | break;
|
---|
930 | }
|
---|
931 | }
|
---|
932 |
|
---|
933 | if (n == ntm) {
|
---|
934 | // Extend the POINTING subtable.
|
---|
935 | cPointing.addRow();
|
---|
936 | //Int n = cPointing.nrow() - 1;
|
---|
937 |
|
---|
938 | // Keys.
|
---|
939 | cPointingCols->antennaId().put(n, 0);
|
---|
940 | cPointingCols->time().put(n, time);
|
---|
941 | cPointingCols->interval().put(n, interval);
|
---|
942 |
|
---|
943 | // Data.
|
---|
944 | cPointingCols->name().put(n, fieldName);
|
---|
945 | cPointingCols->numPoly().put(n, 1);
|
---|
946 | cPointingCols->timeOrigin().put(n, time);
|
---|
947 |
|
---|
948 | //Matrix<Double> track(2, 2);
|
---|
949 | Matrix<Double> track(2, 1);
|
---|
950 | track.column(0) = direction;
|
---|
951 | //track.column(1) = scanRate;
|
---|
952 | cPointingCols->direction().put(n, track);
|
---|
953 | cPointingCols->target().put(n, track);
|
---|
954 | cPointingCols->tracking().put(n, True);
|
---|
955 | }
|
---|
956 | return n;
|
---|
957 | }
|
---|
958 |
|
---|
959 | //----------------------------------------- PKSMS2writer::addPolarizationEntry
|
---|
960 |
|
---|
961 | // Add an entry to the POLARIZATION subtable.
|
---|
962 |
|
---|
963 | Int PKSMS2writer::addPolarizationEntry(
|
---|
964 | const Int IFno,
|
---|
965 | const Int nPol)
|
---|
966 | {
|
---|
967 | // Extend the POLARIZATION subtable.
|
---|
968 | Int nr = cPolarization.nrow() ;
|
---|
969 | while (Int(cPolarization.nrow()) < IFno) {
|
---|
970 | cPolarization.addRow(1,True);
|
---|
971 | }
|
---|
972 | Int n = IFno - 1;
|
---|
973 |
|
---|
974 | // Data description.
|
---|
975 | cPolarizationCols->numCorr().put(n, nPol);
|
---|
976 |
|
---|
977 | // Data.
|
---|
978 | Vector<Int> corrType(2);
|
---|
979 | if (nPol == 1) {
|
---|
980 | corrType.resize(1);
|
---|
981 | corrType(0) = Stokes::XX;
|
---|
982 | }
|
---|
983 | else {
|
---|
984 | //Vector<Int> corrType(2);
|
---|
985 | corrType(0) = Stokes::XX;
|
---|
986 | corrType(1) = Stokes::YY;
|
---|
987 | }
|
---|
988 | // initialization
|
---|
989 | for ( Int i = nr ; i < n ; i++ )
|
---|
990 | cPolarizationCols->corrType().put( i, corrType ) ;
|
---|
991 | cPolarizationCols->corrType().put(n, corrType);
|
---|
992 |
|
---|
993 | Matrix<Int> corrProduct(2,2,1);
|
---|
994 | if (nPol == 1) {
|
---|
995 | corrProduct.resize(2,1,1);
|
---|
996 | corrProduct(1,0) = 0;
|
---|
997 | }
|
---|
998 | if (nPol == 2) {
|
---|
999 | corrProduct(1,0) = 0;
|
---|
1000 | corrProduct(0,1) = 0;
|
---|
1001 | }
|
---|
1002 | cPolarizationCols->corrProduct().put(n, corrProduct);
|
---|
1003 |
|
---|
1004 | // Flags.
|
---|
1005 | cPolarizationCols->flagRow().put(n, False);
|
---|
1006 |
|
---|
1007 | return n;
|
---|
1008 | }
|
---|
1009 |
|
---|
1010 |
|
---|
1011 | //-------------------------------------------- PKSMS2writer::addProcessorEntry
|
---|
1012 |
|
---|
1013 | // Add an entry to the PROCESSOR subtable.
|
---|
1014 |
|
---|
1015 | Int PKSMS2writer::addProcessorEntry()
|
---|
1016 | {
|
---|
1017 | // Extend the PROCESSOR subtable.
|
---|
1018 | cProcessor.addRow();
|
---|
1019 | Int n = cProcessor.nrow() - 1;
|
---|
1020 |
|
---|
1021 | // Data.
|
---|
1022 | cProcessorCols->type().put(n, "SPECTROMETER");
|
---|
1023 | cProcessorCols->subType().put(n, "MULTIBEAM");
|
---|
1024 | cProcessorCols->typeId().put(n, -1);
|
---|
1025 | cProcessorCols->modeId().put(n, -1);
|
---|
1026 |
|
---|
1027 | // Flags.
|
---|
1028 | cProcessorCols->flagRow().put(n, False);
|
---|
1029 |
|
---|
1030 | return n;
|
---|
1031 | }
|
---|
1032 |
|
---|
1033 | //----------------------------------------------- PKSMS2writer::addSourceEntry
|
---|
1034 |
|
---|
1035 | // Add an entry to the SOURCE subtable.
|
---|
1036 |
|
---|
1037 | Int PKSMS2writer::addSourceEntry(
|
---|
1038 | const String name,
|
---|
1039 | const Vector<Double> direction,
|
---|
1040 | const Vector<Double> properMotion,
|
---|
1041 | //const Double restFreq,
|
---|
1042 | const Vector<Double> restFreq,
|
---|
1043 | const Double radialVelocity)
|
---|
1044 | {
|
---|
1045 | // Look for an entry in the SOURCE subtable.
|
---|
1046 | ROScalarColumn<String> sources(cSource, "NAME");
|
---|
1047 | Int n;
|
---|
1048 | Int nSrc = sources.nrow();
|
---|
1049 | for (n = 0; n < nSrc; n++) {
|
---|
1050 | if (sources(n) == name) {
|
---|
1051 | break;
|
---|
1052 | }
|
---|
1053 | }
|
---|
1054 |
|
---|
1055 | if (n == nSrc) {
|
---|
1056 | // Not found, add a new entry to the SOURCE subtable.
|
---|
1057 | cSource.addRow();
|
---|
1058 |
|
---|
1059 | // Keys.
|
---|
1060 | cSourceCols->sourceId().put(n, n);
|
---|
1061 | cSourceCols->time().put(n, 0.0);
|
---|
1062 | cSourceCols->interval().put(n, -1.0);
|
---|
1063 | cSourceCols->spectralWindowId().put(n, -1);
|
---|
1064 |
|
---|
1065 | // Data description.
|
---|
1066 | cSourceCols->numLines().put(n, 1);
|
---|
1067 |
|
---|
1068 | // Data.
|
---|
1069 | cSourceCols->name().put(n, name);
|
---|
1070 | cSourceCols->calibrationGroup().put(n, 0);
|
---|
1071 | cSourceCols->code().put(n, "");
|
---|
1072 | cSourceCols->direction().put(n, direction);
|
---|
1073 | // Vector<Double> position(3, 0.0);
|
---|
1074 | // cSourceCols->position().put(n, position);
|
---|
1075 | cSourceCols->properMotion().put(n, properMotion);
|
---|
1076 | // Vector<Double> restFrequency(1, restFreq);
|
---|
1077 | // cSourceCols->restFrequency().put(n, restFrequency);
|
---|
1078 | cSourceCols->restFrequency().put(n, restFreq);
|
---|
1079 | Vector<Double> sysvel(1, radialVelocity);
|
---|
1080 | cSourceCols->sysvel().put(n, sysvel);
|
---|
1081 | }
|
---|
1082 |
|
---|
1083 | return n;
|
---|
1084 | }
|
---|
1085 |
|
---|
1086 | //--------------------------------------- PKSMS2writer::addSpectralWindowEntry
|
---|
1087 |
|
---|
1088 | // Add an entry to the SPECTRAL_WINDOW subtable.
|
---|
1089 |
|
---|
1090 | Int PKSMS2writer::addSpectralWindowEntry(
|
---|
1091 | const Int IFno,
|
---|
1092 | const Int nChan,
|
---|
1093 | const Double refFreq,
|
---|
1094 | const Double bandwidth,
|
---|
1095 | const Double freqInc)
|
---|
1096 | {
|
---|
1097 | // Extend the SPECTRAL_WINDOW subtable.
|
---|
1098 | Int nr = cSpectralWindow.nrow() ;
|
---|
1099 | while (Int(cSpectralWindow.nrow()) < IFno) {
|
---|
1100 | cSpectralWindow.addRow(1,True);
|
---|
1101 | }
|
---|
1102 | Int n = IFno - 1;
|
---|
1103 |
|
---|
1104 | // Data description.
|
---|
1105 | cSpWindowCols->numChan().put(n, nChan);
|
---|
1106 |
|
---|
1107 | // Data.
|
---|
1108 | //cSpWindowCols->name().put(n, "L-band");
|
---|
1109 | cSpWindowCols->name().put(n, " ");
|
---|
1110 | cSpWindowCols->refFrequency().put(n, refFreq);
|
---|
1111 |
|
---|
1112 | // 0-relative reference channel number.
|
---|
1113 | Double refChan = nChan / 2;
|
---|
1114 | Vector<Double> freqs(nChan);
|
---|
1115 | for (Int i = 0; i < nChan; i++) {
|
---|
1116 | freqs(i) = refFreq + (i - refChan)*freqInc;
|
---|
1117 | }
|
---|
1118 | // initialization
|
---|
1119 | for ( Int i = nr ; i < n ; i++ )
|
---|
1120 | cSpWindowCols->chanFreq().put( i, freqs ) ;
|
---|
1121 | cSpWindowCols->chanFreq().put(n, freqs);
|
---|
1122 |
|
---|
1123 | Vector<Double> chanWidths(nChan, freqInc);
|
---|
1124 | // initialization
|
---|
1125 | for ( Int i = nr ; i < n ; i++ ) {
|
---|
1126 | cSpWindowCols->chanWidth().put( i, chanWidths ) ;
|
---|
1127 | cSpWindowCols->effectiveBW().put( i, chanWidths ) ;
|
---|
1128 | }
|
---|
1129 | cSpWindowCols->chanWidth().put(n, chanWidths);
|
---|
1130 |
|
---|
1131 | cSpWindowCols->measFreqRef().put(n, cDopplerFrame);
|
---|
1132 | cSpWindowCols->effectiveBW().put(n, chanWidths);
|
---|
1133 |
|
---|
1134 | Vector<Double> resolution(nChan, fabs(freqInc));
|
---|
1135 | // initialization
|
---|
1136 | for ( Int i = nr ; i < n ; i++ )
|
---|
1137 | cSpWindowCols->resolution().put( i, resolution ) ;
|
---|
1138 | cSpWindowCols->resolution().put(n, resolution);
|
---|
1139 |
|
---|
1140 | cSpWindowCols->totalBandwidth().put(n, bandwidth);
|
---|
1141 | cSpWindowCols->netSideband().put(n, 0);
|
---|
1142 | cSpWindowCols->ifConvChain().put(n, -1);
|
---|
1143 | cSpWindowCols->freqGroup().put(n, 0);
|
---|
1144 | cSpWindowCols->freqGroupName().put(n, " ");
|
---|
1145 | cSpWindowCols->dopplerId().put(n, 0);
|
---|
1146 |
|
---|
1147 | // Flags.
|
---|
1148 | cSpWindowCols->flagRow().put(n, False);
|
---|
1149 |
|
---|
1150 | return n;
|
---|
1151 | }
|
---|
1152 |
|
---|
1153 | //------------------------------------------------ PKSMS2writer::addStateEntry
|
---|
1154 |
|
---|
1155 | // Add an entry to the STATE subtable.
|
---|
1156 |
|
---|
1157 | Int PKSMS2writer::addStateEntry(
|
---|
1158 | const String obsType)
|
---|
1159 | {
|
---|
1160 | // Look for an entry in the STATE subtable.
|
---|
1161 | for (uInt n = 0; n < cStateCols->nrow(); n++) {
|
---|
1162 | if (cStateCols->obsMode()(n) == obsType) {
|
---|
1163 | return n;
|
---|
1164 | }
|
---|
1165 | }
|
---|
1166 |
|
---|
1167 | // Not found, extend the STATE subtable.
|
---|
1168 | cState.addRow();
|
---|
1169 | uInt n = cStateCols->nrow() - 1;
|
---|
1170 |
|
---|
1171 | // Data.
|
---|
1172 | if (obsType.contains("RF")) {
|
---|
1173 | cStateCols->sig().put(n, False);
|
---|
1174 | cStateCols->ref().put(n, True);
|
---|
1175 | } else if (!obsType.contains("PA")) {
|
---|
1176 | // Signal and reference are both false for "paddle" data.
|
---|
1177 | cStateCols->sig().put(n, True);
|
---|
1178 | cStateCols->ref().put(n, False);
|
---|
1179 | }
|
---|
1180 |
|
---|
1181 | cStateCols->load().put(n, 0.0);
|
---|
1182 | cStateCols->cal().put(n, 0.0);
|
---|
1183 | cStateCols->subScan().put(n, 0);
|
---|
1184 | cStateCols->obsMode().put(n, obsType);
|
---|
1185 |
|
---|
1186 | // Flags.
|
---|
1187 | cStateCols->flagRow().put(n, False);
|
---|
1188 |
|
---|
1189 | return n;
|
---|
1190 | }
|
---|
1191 |
|
---|
1192 | //----------------------------------------------- PKSMS2writer::addSysCalEntry
|
---|
1193 |
|
---|
1194 | // Add an entry to the SYSCAL subtable.
|
---|
1195 |
|
---|
1196 | Int PKSMS2writer::addSysCalEntry(
|
---|
1197 | const Int beamNo,
|
---|
1198 | const Int spWinId,
|
---|
1199 | const Double time,
|
---|
1200 | const Double interval,
|
---|
1201 | const Vector<Float> tcal,
|
---|
1202 | const Vector<Float> tsys,
|
---|
1203 | const Int nPol)
|
---|
1204 | {
|
---|
1205 | LogIO os(LogOrigin("PKSMS2writer", "addSysCalEntry()", WHERE));
|
---|
1206 |
|
---|
1207 | // Extend the SYSCAL subtable.
|
---|
1208 | cSysCal.addRow();
|
---|
1209 | Int n = cSysCal.nrow() - 1;
|
---|
1210 |
|
---|
1211 | //check fo consistency with n pol
|
---|
1212 | //here assume size of Tcal vector = npol
|
---|
1213 | Vector<Float> inTcal(nPol,0);
|
---|
1214 | Int ndim = tcal.shape()(0);
|
---|
1215 | Vector<Float> tmpTcal = tcal;
|
---|
1216 | if (nPol != ndim) {
|
---|
1217 | os << LogIO::WARN
|
---|
1218 | << "Found "<< ndim <<" Tcal value(s) for the data with "<<nPol<<" polarization(s)"
|
---|
1219 | << "(expecting one Tcal per pol)."<<endl
|
---|
1220 | << "First "<< nPol << " Tcal value(s) will be filled." << LogIO::POST;
|
---|
1221 | tmpTcal.resize(nPol, True);
|
---|
1222 | inTcal = tmpTcal;
|
---|
1223 | }
|
---|
1224 | // Keys.
|
---|
1225 | cSysCalCols->antennaId().put(n, 0);
|
---|
1226 | cSysCalCols->feedId().put(n, beamNo-1);
|
---|
1227 | cSysCalCols->spectralWindowId().put(n, spWinId);
|
---|
1228 | cSysCalCols->time().put(n, time);
|
---|
1229 | cSysCalCols->interval().put(n, interval);
|
---|
1230 |
|
---|
1231 | // Data.
|
---|
1232 | //cSysCalCols->tcal().put(n, tcal);
|
---|
1233 | cSysCalCols->tcal().put(n, inTcal);
|
---|
1234 | cSysCalCols->tsys().put(n, tsys);
|
---|
1235 |
|
---|
1236 | return n;
|
---|
1237 | }
|
---|
1238 |
|
---|
1239 | //---------------------------------------------- PKSMS2writer::addWeatherEntry
|
---|
1240 |
|
---|
1241 | // Add an entry to the WEATHER subtable.
|
---|
1242 |
|
---|
1243 | Int PKSMS2writer::addWeatherEntry(
|
---|
1244 | const Double time,
|
---|
1245 | const Double interval,
|
---|
1246 | const Double pressure,
|
---|
1247 | const Double relHumidity,
|
---|
1248 | const Double temperature)
|
---|
1249 | {
|
---|
1250 | // Extend the WEATHER subtable.
|
---|
1251 | cWeather.addRow();
|
---|
1252 | Int n = cWeather.nrow() - 1;
|
---|
1253 |
|
---|
1254 | // Keys.
|
---|
1255 | cWeatherCols->antennaId().put(n, 0);
|
---|
1256 | cWeatherCols->time().put(n, time);
|
---|
1257 | cWeatherCols->interval().put(n, interval);
|
---|
1258 |
|
---|
1259 | // Data.
|
---|
1260 | cWeatherCols->pressure().put(n, pressure);
|
---|
1261 | cWeatherCols->relHumidity().put(n, relHumidity);
|
---|
1262 | cWeatherCols->temperature().put(n, temperature);
|
---|
1263 |
|
---|
1264 | return n;
|
---|
1265 | }
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