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source: branches/alma/python/asapplotter.py@ 1777

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Last change on this file since 1777 was 1765, checked in by Kana Sugimoto, 14 years ago

New Development: No

JIRA Issue: No (bug fixes)

Ready for Test: Yes

Interface Changes: No

What Interface Changed: Please list interface changes

Test Programs: Quit plotter with buttons and replot

Put in Release Notes: No

Module(s): sdplot

Description: fixed bugs for the plotter to work fine for replotting once after quitted

Property svn:eol-style set to native
Property svn:keywords set to Author Date Id Revision

File size: 52.8 KB

Rev	Line
[1757]	1	from asap import rcParams, print_log, print_log_dec
	2	from asap import selector, scantable
[1614]	3	from asap import asaplog
[1153]	4	import matplotlib.axes
[1757]	5	from matplotlib.font_manager import FontProperties
	6	from matplotlib.text import Text
	7
[1317]	8	import re
[203]	9
	10	class asapplotter:
[226]	11	"""
	12	The ASAP plotter.
	13	By default the plotter is set up to plot polarisations
	14	'colour stacked' and scantables across panels.
	15	Note:
	16	Currenly it only plots 'spectra' not Tsys or
	17	other variables.
	18	"""
[1757]	19	def __init__(self, visible=None , **kwargs):
[734]	20	self._visible = rcParams['plotter.gui']
	21	if visible is not None:
	22	self._visible = visible
[1757]	23	self._plotter = self._newplotter(**kwargs)
[1758]	24	# additional tool bar
	25	self._plotter.figmgr.casabar=self._newcasabar()
[710]	26
[554]	27	self._panelling = None
	28	self._stacking = None
	29	self.set_panelling()
	30	self.set_stacking()
[377]	31	self._rows = None
	32	self._cols = None
[203]	33	self._autoplot = False
[525]	34	self._minmaxx = None
	35	self._minmaxy = None
[710]	36	self._datamask = None
[203]	37	self._data = None
[607]	38	self._lmap = None
[226]	39	self._title = None
[257]	40	self._ordinate = None
	41	self._abcissa = None
[709]	42	self._abcunit = None
[920]	43	self._usermask = []
	44	self._maskselection = None
	45	self._selection = selector()
[1023]	46	self._hist = rcParams['plotter.histogram']
[1757]	47	self._fp = FontProperties()
[1723]	48	self._panellayout = self.set_panellayout(refresh=False)
[1023]	49
[920]	50	def _translate(self, instr):
	51	keys = "s b i p t".split()
	52	if isinstance(instr, str):
	53	for key in keys:
	54	if instr.lower().startswith(key):
	55	return key
	56	return None
	57
[1757]	58	def _newplotter(self, **kwargs):
[1724]	59	backend=matplotlib.get_backend()
	60	if not self._visible:
	61	from asap.asaplot import asaplot
	62	elif backend == 'TkAgg':
[710]	63	from asap.asaplotgui import asaplotgui as asaplot
[1724]	64	elif backend == 'Qt4Agg':
	65	from asap.asaplotgui_qt4 import asaplotgui as asaplot
	66	elif backend == 'GTkAgg':
	67	from asap.asaplotgui_gtk import asaplotgui as asaplot
[710]	68	else:
	69	from asap.asaplot import asaplot
[1757]	70	return asaplot(**kwargs)
[710]	71
[1758]	72	def _newcasabar(self):
	73	backend=matplotlib.get_backend()
	74	if self._visible and backend == "TkAgg":
	75	from asap.casatoolbar import CustomToolbarTkAgg
	76	return CustomToolbarTkAgg(self)
	77	else: return None
	78
[1757]	79	#@print_log_dec
[935]	80	def plot(self, scan=None):
[203]	81	"""
[920]	82	Plot a scantable.
[203]	83	Parameters:
[920]	84	scan: a scantable
[203]	85	Note:
[920]	86	If a scantable was specified in a previous call
[203]	87	to plot, no argument has to be given to 'replot'
[920]	88	NO checking is done that the abcissas of the scantable
[203]	89	are consistent e.g. all 'channel' or all 'velocity' etc.
	90	"""
[710]	91	if self._plotter.is_dead:
[1765]	92	if hasattr(self._plotter.figmgr,'casabar'):
	93	del self._plotter.figmgr.casabar
[710]	94	self._plotter = self._newplotter()
[1765]	95	self._plotter.figmgr.casabar=self._newcasabar()
[600]	96	self._plotter.hold()
[203]	97	self._plotter.clear()
[935]	98	if not self._data and not scan:
[1101]	99	msg = "Input is not a scantable"
	100	if rcParams['verbose']:
[1612]	101	#print msg
[1614]	102	asaplog.push( msg )
	103	print_log( 'ERROR' )
[1101]	104	return
	105	raise TypeError(msg)
[1698]	106	if scan: self.set_data(scan,refresh=False)
[920]	107	self._plot(self._data)
[709]	108	if self._minmaxy is not None:
	109	self._plotter.set_limits(ylim=self._minmaxy)
[1724]	110	if self._plotter.figmgr.casabar: self._plotter.figmgr.casabar.enable_button()
[203]	111	self._plotter.release()
[1153]	112	self._plotter.tidy()
	113	self._plotter.show(hardrefresh=False)
[753]	114	print_log()
[203]	115	return
	116
[1757]	117	def gca(self):
	118	return self._plotter.figure.gca()
[1153]	119
[1757]	120	def refresh(self):
	121	"""Do a soft refresh"""
	122	self._plotter.figure.show()
	123
	124	def create_mask(self, nwin=1, panel=0, color=None):
	125	"""
	126	Interactively define a mask.It retruns a mask that is equivalent to
	127	the one created manually with scantable.create_mask.
	128	Parameters:
	129	nwin: The number of mask windows to create interactively
	130	default is 1.
	131	panel: Which panel to use for mask selection. This is useful
	132	if different IFs are spread over panels (default 0)
	133	"""
	134	if self._data is None:
	135	return []
	136	outmask = []
	137	self._plotter.subplot(panel)
	138	xmin, xmax = self._plotter.axes.get_xlim()
	139	marg = 0.05*(xmax-xmin)
	140	self._plotter.axes.set_xlim(xmin-marg, xmax+marg)
	141	self.refresh()
	142
	143	def cleanup(lines=False, texts=False, refresh=False):
	144	if lines:
	145	del self._plotter.axes.lines[-1]
	146	if texts:
	147	del self._plotter.axes.texts[-1]
	148	if refresh:
	149	self.refresh()
	150
	151	for w in xrange(nwin):
	152	wpos = []
	153	self.text(0.05,1.0, "Add start boundary",
	154	coords="relative", fontsize=10)
	155	point = self._plotter.get_point()
	156	cleanup(texts=True)
	157	if point is None:
	158	continue
	159	wpos.append(point[0])
	160	self.axvline(wpos[0], color=color)
	161	self.text(0.05,1.0, "Add end boundary", coords="relative", fontsize=10)
	162	point = self._plotter.get_point()
	163	cleanup(texts=True, lines=True)
	164	if point is None:
	165	self.refresh()
	166	continue
	167	wpos.append(point[0])
	168	self.axvspan(wpos[0], wpos[1], alpha=0.1,
	169	edgecolor=color, facecolor=color)
	170	ymin, ymax = self._plotter.axes.get_ylim()
	171	outmask.append(wpos)
	172
	173	self._plotter.axes.set_xlim(xmin, xmax)
	174	self.refresh()
	175	if len(outmask) > 0:
	176	return self._data.create_mask(*outmask)
	177	return []
	178
[1153]	179	# forwards to matplotlib axes
	180	def text(self, args, *kwargs):
[1757]	181	if kwargs.has_key("interactive"):
	182	#if kwargs.pop("interactive"):
	183	# pos = self._plotter.get_point()
	184	# args = tuple(pos)+args
	185	kwargs.pop("interactive")
[1153]	186	self._axes_callback("text", args, *kwargs)
[1757]	187
[1358]	188	text.__doc__ = matplotlib.axes.Axes.text.__doc__
[1757]	189
[1153]	190	def arrow(self, args, *kwargs):
[1757]	191	if kwargs.has_key("interactive"):
	192	#if kwargs.pop("interactive"):
	193	# pos = self._plotter.get_region()
	194	# dpos = (pos[0][0], pos[0][1],
	195	# pos[1][0]-pos[0][0],
	196	# pos[1][1] - pos[0][1])
	197	# args = dpos + args
	198	kwargs.pop("interactive")
[1153]	199	self._axes_callback("arrow", args, *kwargs)
[1757]	200
[1358]	201	arrow.__doc__ = matplotlib.axes.Axes.arrow.__doc__
[1757]	202
	203	def annotate(self, text, xy=None, xytext=None, **kwargs):
	204	if kwargs.has_key("interactive"):
	205	#if kwargs.pop("interactive"):
	206	# xy = self._plotter.get_point()
	207	# xytext = self._plotter.get_point()
	208	kwargs.pop("interactive")
	209	if not kwargs.has_key("arrowprops"):
	210	kwargs["arrowprops"] = dict(arrowstyle="->")
	211	self._axes_callback("annotate", text, xy, xytext, **kwargs)
	212
	213	annotate.__doc__ = matplotlib.axes.Axes.annotate.__doc__
	214
[1153]	215	def axvline(self, args, *kwargs):
[1757]	216	if kwargs.has_key("interactive"):
	217	#if kwargs.pop("interactive"):
	218	# pos = self._plotter.get_point()
	219	# args = (pos[0],)+args
	220	kwargs.pop("interactive")
[1153]	221	self._axes_callback("axvline", args, *kwargs)
[1757]	222
[1358]	223	axvline.__doc__ = matplotlib.axes.Axes.axvline.__doc__
[1757]	224
[1153]	225	def axhline(self, args, *kwargs):
[1757]	226	if kwargs.has_key("interactive"):
	227	#if kwargs.pop("interactive"):
	228	# pos = self._plotter.get_point()
	229	# args = (pos[1],)+args
	230	kwargs.pop("interactive")
[1153]	231	self._axes_callback("axhline", args, *kwargs)
[1757]	232
[1358]	233	axhline.__doc__ = matplotlib.axes.Axes.axhline.__doc__
[1757]	234
[1153]	235	def axvspan(self, args, *kwargs):
[1757]	236	if kwargs.has_key("interactive"):
	237	#if kwargs.pop("interactive"):
	238	# pos = self._plotter.get_region()
	239	# dpos = (pos[0][0], pos[1][0])
	240	# args = dpos + args
	241	kwargs.pop("interactive")
[1153]	242	self._axes_callback("axvspan", args, *kwargs)
	243	# hack to preventy mpl from redrawing the patch
	244	# it seem to convert the patch into lines on every draw.
	245	# This doesn't happen in a test script???
[1757]	246	#del self._plotter.axes.patches[-1]
	247
[1358]	248	axvspan.__doc__ = matplotlib.axes.Axes.axvspan.__doc__
[1232]	249
[1153]	250	def axhspan(self, args, *kwargs):
[1757]	251	if kwargs.has_key("interactive"):
	252	#if kwargs.pop("interactive"):
	253	# pos = self._plotter.get_region()
	254	# dpos = (pos[0][1], pos[1][1])
	255	# args = dpos + args
	256	kwargs.pop("interactive")
[1232]	257	self._axes_callback("axhspan", args, *kwargs)
[1153]	258	# hack to preventy mpl from redrawing the patch
	259	# it seem to convert the patch into lines on every draw.
	260	# This doesn't happen in a test script???
[1757]	261	#del self._plotter.axes.patches[-1]
	262
[1358]	263	axhspan.__doc__ = matplotlib.axes.Axes.axhspan.__doc__
[1153]	264
	265	def _axes_callback(self, axesfunc, args, *kwargs):
	266	panel = 0
	267	if kwargs.has_key("panel"):
	268	panel = kwargs.pop("panel")
	269	coords = None
	270	if kwargs.has_key("coords"):
	271	coords = kwargs.pop("coords")
	272	if coords.lower() == 'world':
	273	kwargs["transform"] = self._plotter.axes.transData
	274	elif coords.lower() == 'relative':
	275	kwargs["transform"] = self._plotter.axes.transAxes
	276	self._plotter.subplot(panel)
	277	self._plotter.axes.set_autoscale_on(False)
	278	getattr(self._plotter.axes, axesfunc)(args, *kwargs)
	279	self._plotter.show(False)
	280	self._plotter.axes.set_autoscale_on(True)
	281	# end matplotlib.axes fowarding functions
	282
[1698]	283	def set_data(self, scan, refresh=True):
[203]	284	"""
[1698]	285	Set a scantable to plot.
	286	Parameters:
	287	scan: a scantable
	288	refresh: True (default) or False. If True, the plot is
	289	replotted based on the new parameter setting(s).
	290	Otherwise,the parameter(s) are set without replotting.
[1702]	291	Note:
	292	The user specified masks and data selections will be reset
	293	if a new scantable is set. This method should be called before
	294	setting data selections (set_selection) and/or masks (set_mask).
[1698]	295	"""
	296	from asap import scantable
	297	if isinstance(scan, scantable):
	298	if self._data is not None:
	299	if scan != self._data:
	300	self._data = scan
	301	# reset
	302	self._reset()
[1702]	303	msg = "A new scantable is set to the plotter. The masks and data selections are reset."
	304	asaplog.push( msg )
	305	print_log( 'INFO' )
[1698]	306	else:
	307	self._data = scan
	308	self._reset()
	309	else:
	310	msg = "Input is not a scantable"
	311	if rcParams['verbose']:
	312	#print msg
	313	asaplog.push( msg )
	314	print_log( 'ERROR' )
	315	return
	316	raise TypeError(msg)
	317
	318	# ranges become invalid when unit changes
	319	if self._abcunit and self._abcunit != self._data.get_unit():
	320	self._minmaxx = None
	321	self._minmaxy = None
	322	self._abcunit = self._data.get_unit()
	323	self._datamask = None
	324	if refresh: self.plot()
	325
	326
	327	def set_mode(self, stacking=None, panelling=None, refresh=True):
	328	"""
[377]	329	Set the plots look and feel, i.e. what you want to see on the plot.
[203]	330	Parameters:
	331	stacking: tell the plotter which variable to plot
[1217]	332	as line colour overlays (default 'pol')
[203]	333	panelling: tell the plotter which variable to plot
	334	across multiple panels (default 'scan'
[1698]	335	refresh: True (default) or False. If True, the plot is
	336	replotted based on the new parameter setting(s).
	337	Otherwise,the parameter(s) are set without replotting.
[203]	338	Note:
	339	Valid modes are:
	340	'beam' 'Beam' 'b': Beams
	341	'if' 'IF' 'i': IFs
	342	'pol' 'Pol' 'p': Polarisations
	343	'scan' 'Scan' 's': Scans
	344	'time' 'Time' 't': Times
	345	"""
[753]	346	msg = "Invalid mode"
	347	if not self.set_panelling(panelling) or \
	348	not self.set_stacking(stacking):
	349	if rcParams['verbose']:
[1612]	350	#print msg
[1614]	351	asaplog.push( msg )
	352	print_log( 'ERROR' )
[753]	353	return
	354	else:
	355	raise TypeError(msg)
[1698]	356	if refresh and self._data: self.plot(self._data)
[203]	357	return
	358
[554]	359	def set_panelling(self, what=None):
	360	mode = what
	361	if mode is None:
	362	mode = rcParams['plotter.panelling']
	363	md = self._translate(mode)
[203]	364	if md:
[554]	365	self._panelling = md
[226]	366	self._title = None
[203]	367	return True
	368	return False
	369
[1698]	370	def set_layout(self,rows=None,cols=None,refresh=True):
[377]	371	"""
	372	Set the multi-panel layout, i.e. how many rows and columns plots
	373	are visible.
	374	Parameters:
	375	rows: The number of rows of plots
	376	cols: The number of columns of plots
[1698]	377	refresh: True (default) or False. If True, the plot is
	378	replotted based on the new parameter setting(s).
	379	Otherwise,the parameter(s) are set without replotting.
[377]	380	Note:
	381	If no argument is given, the potter reverts to its auto-plot
	382	behaviour.
	383	"""
	384	self._rows = rows
	385	self._cols = cols
[1698]	386	if refresh and self._data: self.plot(self._data)
[377]	387	return
	388
[709]	389	def set_stacking(self, what=None):
[554]	390	mode = what
[709]	391	if mode is None:
	392	mode = rcParams['plotter.stacking']
[554]	393	md = self._translate(mode)
[203]	394	if md:
	395	self._stacking = md
[226]	396	self._lmap = None
[203]	397	return True
	398	return False
	399
[1698]	400	def set_range(self,xstart=None,xend=None,ystart=None,yend=None,refresh=True):
[203]	401	"""
	402	Set the range of interest on the abcissa of the plot
	403	Parameters:
[525]	404	[x,y]start,[x,y]end: The start and end points of the 'zoom' window
[1698]	405	refresh: True (default) or False. If True, the plot is
	406	replotted based on the new parameter setting(s).
	407	Otherwise,the parameter(s) are set without replotting.
[203]	408	Note:
	409	These become non-sensical when the unit changes.
	410	use plotter.set_range() without parameters to reset
	411
	412	"""
[525]	413	if xstart is None and xend is None:
	414	self._minmaxx = None
[600]	415	else:
	416	self._minmaxx = [xstart,xend]
[525]	417	if ystart is None and yend is None:
	418	self._minmaxy = None
[600]	419	else:
[709]	420	self._minmaxy = [ystart,yend]
[1698]	421	if refresh and self._data: self.plot(self._data)
[203]	422	return
[709]	423
[1698]	424	def set_legend(self, mp=None, fontsize = None, mode = 0, refresh=True):
[203]	425	"""
	426	Specify a mapping for the legend instead of using the default
	427	indices:
	428	Parameters:
[1101]	429	mp: a list of 'strings'. This should have the same length
	430	as the number of elements on the legend and then maps
	431	to the indeces in order. It is possible to uses latex
	432	math expression. These have to be enclosed in r'',
	433	e.g. r'$x^{2}$'
	434	fontsize: The font size of the label (default None)
	435	mode: where to display the legend
	436	Any other value for loc else disables the legend:
[1096]	437	0: auto
	438	1: upper right
	439	2: upper left
	440	3: lower left
	441	4: lower right
	442	5: right
	443	6: center left
	444	7: center right
	445	8: lower center
	446	9: upper center
	447	10: center
[1698]	448	refresh: True (default) or False. If True, the plot is
	449	replotted based on the new parameter setting(s).
	450	Otherwise,the parameter(s) are set without replotting.
[203]	451
	452	Example:
[485]	453	If the data has two IFs/rest frequencies with index 0 and 1
[203]	454	for CO and SiO:
	455	plotter.set_stacking('i')
[710]	456	plotter.set_legend(['CO','SiO'])
[203]	457	plotter.plot()
[710]	458	plotter.set_legend([r'$^{12}CO$', r'SiO'])
[203]	459	"""
	460	self._lmap = mp
[1096]	461	self._plotter.legend(mode)
[1101]	462	if isinstance(fontsize, int):
	463	from matplotlib import rc as rcp
	464	rcp('legend', fontsize=fontsize)
[1698]	465	if refresh and self._data: self.plot(self._data)
[226]	466	return
	467
[1698]	468	def set_title(self, title=None, fontsize=None, refresh=True):
[710]	469	"""
	470	Set the title of the plot. If multiple panels are plotted,
	471	multiple titles have to be specified.
[1698]	472	Parameters:
	473	refresh: True (default) or False. If True, the plot is
	474	replotted based on the new parameter setting(s).
	475	Otherwise,the parameter(s) are set without replotting.
[710]	476	Example:
	477	# two panels are visible on the plotter
	478	plotter.set_title(["First Panel","Second Panel"])
	479	"""
[226]	480	self._title = title
[1101]	481	if isinstance(fontsize, int):
	482	from matplotlib import rc as rcp
	483	rcp('axes', titlesize=fontsize)
[1698]	484	if refresh and self._data: self.plot(self._data)
[226]	485	return
	486
[1698]	487	def set_ordinate(self, ordinate=None, fontsize=None, refresh=True):
[710]	488	"""
	489	Set the y-axis label of the plot. If multiple panels are plotted,
	490	multiple labels have to be specified.
[1021]	491	Parameters:
	492	ordinate: a list of ordinate labels. None (default) let
	493	data determine the labels
[1698]	494	refresh: True (default) or False. If True, the plot is
	495	replotted based on the new parameter setting(s).
	496	Otherwise,the parameter(s) are set without replotting.
[710]	497	Example:
	498	# two panels are visible on the plotter
	499	plotter.set_ordinate(["First Y-Axis","Second Y-Axis"])
	500	"""
[257]	501	self._ordinate = ordinate
[1101]	502	if isinstance(fontsize, int):
	503	from matplotlib import rc as rcp
	504	rcp('axes', labelsize=fontsize)
	505	rcp('ytick', labelsize=fontsize)
[1698]	506	if refresh and self._data: self.plot(self._data)
[257]	507	return
	508
[1698]	509	def set_abcissa(self, abcissa=None, fontsize=None, refresh=True):
[710]	510	"""
	511	Set the x-axis label of the plot. If multiple panels are plotted,
	512	multiple labels have to be specified.
[1021]	513	Parameters:
	514	abcissa: a list of abcissa labels. None (default) let
	515	data determine the labels
[1698]	516	refresh: True (default) or False. If True, the plot is
	517	replotted based on the new parameter setting(s).
	518	Otherwise,the parameter(s) are set without replotting.
[710]	519	Example:
	520	# two panels are visible on the plotter
	521	plotter.set_ordinate(["First X-Axis","Second X-Axis"])
	522	"""
[257]	523	self._abcissa = abcissa
[1101]	524	if isinstance(fontsize, int):
	525	from matplotlib import rc as rcp
	526	rcp('axes', labelsize=fontsize)
	527	rcp('xtick', labelsize=fontsize)
[1698]	528	if refresh and self._data: self.plot(self._data)
[257]	529	return
	530
[1698]	531	def set_colors(self, colmap, refresh=True):
[377]	532	"""
[1217]	533	Set the colours to be used. The plotter will cycle through
	534	these colours when lines are overlaid (stacking mode).
[1021]	535	Parameters:
[1217]	536	colmap: a list of colour names
[1698]	537	refresh: True (default) or False. If True, the plot is
	538	replotted based on the new parameter setting(s).
	539	Otherwise,the parameter(s) are set without replotting.
[710]	540	Example:
	541	plotter.set_colors("red green blue")
	542	# If for example four lines are overlaid e.g I Q U V
	543	# 'I' will be 'red', 'Q' will be 'green', U will be 'blue'
	544	# and 'V' will be 'red' again.
	545	"""
[1217]	546	if isinstance(colmap,str):
	547	colmap = colmap.split()
	548	self._plotter.palette(0, colormap=colmap)
[1698]	549	if refresh and self._data: self.plot(self._data)
[710]	550
[1217]	551	# alias for english speakers
	552	set_colours = set_colors
	553
[1698]	554	def set_histogram(self, hist=True, linewidth=None, refresh=True):
[1021]	555	"""
	556	Enable/Disable histogram-like plotting.
	557	Parameters:
	558	hist: True (default) or False. The fisrt default
	559	is taken from the .asaprc setting
	560	plotter.histogram
[1698]	561	refresh: True (default) or False. If True, the plot is
	562	replotted based on the new parameter setting(s).
	563	Otherwise,the parameter(s) are set without replotting.
[1021]	564	"""
[1023]	565	self._hist = hist
[1101]	566	if isinstance(linewidth, float) or isinstance(linewidth, int):
	567	from matplotlib import rc as rcp
	568	rcp('lines', linewidth=linewidth)
[1698]	569	if refresh and self._data: self.plot(self._data)
[1023]	570
[1698]	571	def set_linestyles(self, linestyles=None, linewidth=None, refresh=True):
[710]	572	"""
[734]	573	Set the linestyles to be used. The plotter will cycle through
	574	these linestyles when lines are overlaid (stacking mode) AND
	575	only one color has been set.
[710]	576	Parameters:
	577	linestyles: a list of linestyles to use.
	578	'line', 'dashed', 'dotted', 'dashdot',
	579	'dashdotdot' and 'dashdashdot' are
	580	possible
[1698]	581	refresh: True (default) or False. If True, the plot is
	582	replotted based on the new parameter setting(s).
	583	Otherwise,the parameter(s) are set without replotting.
[710]	584	Example:
	585	plotter.set_colors("black")
	586	plotter.set_linestyles("line dashed dotted dashdot")
	587	# If for example four lines are overlaid e.g I Q U V
	588	# 'I' will be 'solid', 'Q' will be 'dashed',
	589	# U will be 'dotted' and 'V' will be 'dashdot'.
	590	"""
	591	if isinstance(linestyles,str):
	592	linestyles = linestyles.split()
	593	self._plotter.palette(color=0,linestyle=0,linestyles=linestyles)
[1101]	594	if isinstance(linewidth, float) or isinstance(linewidth, int):
	595	from matplotlib import rc as rcp
	596	rcp('lines', linewidth=linewidth)
[1698]	597	if refresh and self._data: self.plot(self._data)
[710]	598
[1757]	599	def set_font(self, refresh=True,**kwargs):
[1101]	600	"""
	601	Set font properties.
	602	Parameters:
	603	family: one of 'sans-serif', 'serif', 'cursive', 'fantasy', 'monospace'
	604	style: one of 'normal' (or 'roman'), 'italic' or 'oblique'
	605	weight: one of 'normal or 'bold'
	606	size: the 'general' font size, individual elements can be adjusted
	607	seperately
[1698]	608	refresh: True (default) or False. If True, the plot is
	609	replotted based on the new parameter setting(s).
	610	Otherwise,the parameter(s) are set without replotting.
[1101]	611	"""
	612	from matplotlib import rc as rcp
[1757]	613	fdict = {}
	614	for k,v in kwargs.iteritems():
	615	if v:
	616	fdict[k] = v
	617	self._fp = FontProperties(**fdict)
[1698]	618	if refresh and self._data: self.plot(self._data)
[1101]	619
[1723]	620	def set_panellayout(self,layout=[],refresh=True):
	621	"""
	622	Set the layout of subplots.
	623	Parameters:
	624	layout: a list of subplots layout in figure coordinate (0-1),
	625	i.e., fraction of the figure width or height.
	626	The order of elements should be:
	627	[left, bottom, right, top, horizontal space btw panels,
	628	vertical space btw panels].
	629	refresh: True (default) or False. If True, the plot is
	630	replotted based on the new parameter setting(s).
	631	Otherwise,the parameter(s) are set without replotting.
	632	Note
	633	* When layout is not specified, the values are reset to the defaults
	634	of matplotlib.
	635	* If any element is set to be None, the current value is adopted.
	636	"""
	637	if layout == []: self._panellayout=self._reset_panellayout()
	638	else:
	639	self._panellayout=[None]*6
	640	self._panellayout[0:len(layout)]=layout
	641	#print "panel layout set to ",self._panellayout
	642	if refresh and self._data: self.plot(self._data)
	643
	644	def _reset_panellayout(self):
	645	ks=map(lambda x: 'figure.subplot.'+x,
	646	['left','bottom','right','top','hspace','wspace'])
	647	return map(matplotlib.rcParams.get,ks)
	648
[1259]	649	def plot_lines(self, linecat=None, doppler=0.0, deltachan=10, rotate=90.0,
[1146]	650	location=None):
	651	"""
[1158]	652	Plot a line catalog.
	653	Parameters:
	654	linecat: the linecatalog to plot
[1168]	655	doppler: the velocity shift to apply to the frequencies
[1158]	656	deltachan: the number of channels to include each side of the
	657	line to determine a local maximum/minimum
[1259]	658	rotate: the rotation (in degrees) )for the text label (default 90.0)
[1158]	659	location: the location of the line annotation from the 'top',
	660	'bottom' or alternate (None - the default)
[1165]	661	Notes:
	662	If the spectrum is flagged no line will be drawn in that location.
[1146]	663	"""
[1259]	664	if not self._data:
	665	raise RuntimeError("No scantable has been plotted yet.")
[1146]	666	from asap._asap import linecatalog
[1259]	667	if not isinstance(linecat, linecatalog):
	668	raise ValueError("'linecat' isn't of type linecatalog.")
	669	if not self._data.get_unit().endswith("Hz"):
	670	raise RuntimeError("Can only overlay linecatalogs when data is in frequency.")
[1757]	671	from numpy import ma
[1146]	672	for j in range(len(self._plotter.subplots)):
	673	self._plotter.subplot(j)
	674	lims = self._plotter.axes.get_xlim()
[1153]	675	for row in range(linecat.nrow()):
[1259]	676	# get_frequency returns MHz
	677	base = { "GHz": 1000.0, "MHz": 1.0, "Hz": 1.0e-6 }
	678	restf = linecat.get_frequency(row)/base[self._data.get_unit()]
[1165]	679	c = 299792.458
[1174]	680	freq = restf*(1.0-doppler/c)
[1146]	681	if lims[0] < freq < lims[1]:
	682	if location is None:
	683	loc = 'bottom'
[1153]	684	if row%2: loc='top'
[1146]	685	else: loc = location
[1153]	686	maxys = []
	687	for line in self._plotter.axes.lines:
	688	v = line._x
	689	asc = v[0] < v[-1]
	690
	691	idx = None
	692	if not asc:
	693	if v[len(v)-1] <= freq <= v[0]:
	694	i = len(v)-1
	695	while i>=0 and v[i] < freq:
	696	idx = i
	697	i-=1
	698	else:
	699	if v[0] <= freq <= v[len(v)-1]:
	700	i = 0
	701	while i<len(v) and v[i] < freq:
	702	idx = i
	703	i+=1
	704	if idx is not None:
	705	lower = idx - deltachan
	706	upper = idx + deltachan
	707	if lower < 0: lower = 0
	708	if upper > len(v): upper = len(v)
	709	s = slice(lower, upper)
[1167]	710	y = line._y[s]
[1165]	711	maxy = ma.maximum(y)
	712	if isinstance( maxy, float):
	713	maxys.append(maxy)
[1164]	714	if len(maxys):
	715	peak = max(maxys)
[1165]	716	if peak > self._plotter.axes.get_ylim()[1]:
	717	loc = 'bottom'
[1164]	718	else:
	719	continue
[1157]	720	self._plotter.vline_with_label(freq, peak,
	721	linecat.get_name(row),
	722	location=loc, rotate=rotate)
[1153]	723	self._plotter.show(hardrefresh=False)
[1146]	724
[1153]	725
[710]	726	def save(self, filename=None, orientation=None, dpi=None):
	727	"""
[377]	728	Save the plot to a file. The know formats are 'png', 'ps', 'eps'.
	729	Parameters:
	730	filename: The name of the output file. This is optional
	731	and autodetects the image format from the file
	732	suffix. If non filename is specified a file
	733	called 'yyyymmdd_hhmmss.png' is created in the
	734	current directory.
[709]	735	orientation: optional parameter for postscript only (not eps).
	736	'landscape', 'portrait' or None (default) are valid.
	737	If None is choosen for 'ps' output, the plot is
	738	automatically oriented to fill the page.
[710]	739	dpi: The dpi of the output non-ps plot
[377]	740	"""
[709]	741	self._plotter.save(filename,orientation,dpi)
[377]	742	return
[709]	743
[257]	744
[1698]	745	def set_mask(self, mask=None, selection=None, refresh=True):
[525]	746	"""
[734]	747	Set a plotting mask for a specific polarization.
	748	This is useful for masking out "noise" Pangle outside a source.
	749	Parameters:
[920]	750	mask: a mask from scantable.create_mask
	751	selection: the spectra to apply the mask to.
[1698]	752	refresh: True (default) or False. If True, the plot is
	753	replotted based on the new parameter setting(s).
	754	Otherwise,the parameter(s) are set without replotting.
[734]	755	Example:
[920]	756	select = selector()
	757	select.setpolstrings("Pangle")
	758	plotter.set_mask(mymask, select)
[734]	759	"""
[710]	760	if not self._data:
[920]	761	msg = "Can only set mask after a first call to plot()"
[753]	762	if rcParams['verbose']:
[1612]	763	#print msg
[1614]	764	asaplog.push( msg )
	765	print_log( 'ERROR' )
[762]	766	return
[753]	767	else:
[762]	768	raise RuntimeError(msg)
[920]	769	if len(mask):
	770	if isinstance(mask, list) or isinstance(mask, tuple):
	771	self._usermask = array(mask)
[710]	772	else:
[920]	773	self._usermask = mask
	774	if mask is None and selection is None:
	775	self._usermask = []
	776	self._maskselection = None
	777	if isinstance(selection, selector):
[947]	778	self._maskselection = {'b': selection.get_beams(),
	779	's': selection.get_scans(),
	780	'i': selection.get_ifs(),
	781	'p': selection.get_pols(),
[920]	782	't': [] }
[710]	783	else:
[920]	784	self._maskselection = None
[1698]	785	if refresh: self.plot(self._data)
[710]	786
[709]	787	def _slice_indeces(self, data):
	788	mn = self._minmaxx[0]
	789	mx = self._minmaxx[1]
	790	asc = data[0] < data[-1]
	791	start=0
	792	end = len(data)-1
	793	inc = 1
	794	if not asc:
	795	start = len(data)-1
	796	end = 0
	797	inc = -1
	798	# find min index
[1562]	799	#while start > 0 and data[start] < mn:
	800	# start+= inc
	801	minind=start
	802	for ind in xrange(start,end+inc,inc):
	803	if data[ind] > mn: break
	804	minind=ind
[709]	805	# find max index
[1562]	806	#while end > 0 and data[end] > mx:
	807	# end-=inc
	808	#if end > 0: end +=1
	809	maxind=end
	810	for ind in xrange(end,start-inc,-inc):
	811	if data[ind] < mx: break
	812	maxind=ind
	813	start=minind
	814	end=maxind
[709]	815	if start > end:
[1562]	816	return end,start+1
	817	elif start < end:
	818	return start,end+1
	819	else:
	820	return start,end
[709]	821
[710]	822	def _reset(self):
[920]	823	self._usermask = []
[710]	824	self._usermaskspectra = None
[920]	825	self.set_selection(None, False)
	826
	827	def _plot(self, scan):
[947]	828	savesel = scan.get_selection()
	829	sel = savesel + self._selection
	830	d0 = {'s': 'SCANNO', 'b': 'BEAMNO', 'i':'IFNO',
	831	'p': 'POLNO', 'c': 'CYCLENO', 't' : 'TIME' }
	832	order = [d0[self._panelling],d0[self._stacking]]
	833	sel.set_order(order)
	834	scan.set_selection(sel)
[920]	835	d = {'b': scan.getbeam, 's': scan.getscan,
	836	'i': scan.getif, 'p': scan.getpol, 't': scan._gettime }
	837
[1148]	838	polmodes = dict(zip(self._selection.get_pols(),
	839	self._selection.get_poltypes()))
	840	# this returns either a tuple of numbers or a length (ncycles)
	841	# convert this into lengths
	842	n0,nstack0 = self._get_selected_n(scan)
	843	if isinstance(n0, int): n = n0
[1175]	844	else: n = len(n0)
[1148]	845	if isinstance(nstack0, int): nstack = nstack0
[1175]	846	else: nstack = len(nstack0)
[1757]	847	maxpanel, maxstack = 16,16
[920]	848	if n > maxpanel or nstack > maxstack:
[1148]	849	maxn = 0
	850	if nstack > maxstack: maxn = maxstack
	851	if n > maxpanel: maxn = maxpanel
[920]	852	msg ="Scan to be plotted contains more than %d selections.\n" \
[1148]	853	"Selecting first %d selections..." % (maxn, maxn)
[920]	854	asaplog.push(msg)
[1614]	855	print_log('WARN')
[920]	856	n = min(n,maxpanel)
[998]	857	nstack = min(nstack,maxstack)
[920]	858	if n > 1:
	859	ganged = rcParams['plotter.ganged']
[1446]	860	if self._panelling == 'i':
	861	ganged = False
[920]	862	if self._rows and self._cols:
	863	n = min(n,self._rows*self._cols)
	864	self._plotter.set_panels(rows=self._rows,cols=self._cols,
[1723]	865	# nplots=n,ganged=ganged)
	866	nplots=n,layout=self._panellayout,ganged=ganged)
[920]	867	else:
[1723]	868	# self._plotter.set_panels(rows=n,cols=0,nplots=n,ganged=ganged)
	869	self._plotter.set_panels(rows=n,cols=0,nplots=n,layout=self._panellayout,ganged=ganged)
[920]	870	else:
[1723]	871	# self._plotter.set_panels()
	872	self._plotter.set_panels(layout=self._panellayout)
[920]	873	r=0
	874	nr = scan.nrow()
	875	a0,b0 = -1,-1
	876	allxlim = []
[1018]	877	allylim = []
[920]	878	newpanel=True
	879	panelcount,stackcount = 0,0
[1002]	880	while r < nr:
[920]	881	a = d[self._panelling](r)
	882	b = d[self._stacking](r)
	883	if a > a0 and panelcount < n:
	884	if n > 1:
	885	self._plotter.subplot(panelcount)
	886	self._plotter.palette(0)
	887	#title
	888	xlab = self._abcissa and self._abcissa[panelcount] \
	889	or scan._getabcissalabel()
	890	ylab = self._ordinate and self._ordinate[panelcount] \
	891	or scan._get_ordinate_label()
[1757]	892	self._plotter.set_axes('xlabel', xlab)
	893	self._plotter.set_axes('ylabel', ylab)
[920]	894	lbl = self._get_label(scan, r, self._panelling, self._title)
	895	if isinstance(lbl, list) or isinstance(lbl, tuple):
	896	if 0 <= panelcount < len(lbl):
	897	lbl = lbl[panelcount]
	898	else:
	899	# get default label
	900	lbl = self._get_label(scan, r, self._panelling, None)
	901	self._plotter.set_axes('title',lbl)
	902	newpanel = True
	903	stackcount =0
	904	panelcount += 1
	905	if (b > b0 or newpanel) and stackcount < nstack:
	906	y = []
	907	if len(polmodes):
	908	y = scan._getspectrum(r, polmodes[scan.getpol(r)])
	909	else:
	910	y = scan._getspectrum(r)
	911	m = scan._getmask(r)
[1757]	912	from numpy import logical_not, logical_and
[920]	913	if self._maskselection and len(self._usermask) == len(m):
	914	if d[self._stacking](r) in self._maskselection[self._stacking]:
	915	m = logical_and(m, self._usermask)
	916	x = scan._getabcissa(r)
[1757]	917	from numpy import ma, array
[1116]	918	y = ma.masked_array(y,mask=logical_not(array(m,copy=False)))
[920]	919	if self._minmaxx is not None:
	920	s,e = self._slice_indeces(x)
	921	x = x[s:e]
	922	y = y[s:e]
[1096]	923	if len(x) > 1024 and rcParams['plotter.decimate']:
	924	fac = len(x)/1024
[920]	925	x = x[::fac]
	926	y = y[::fac]
	927	llbl = self._get_label(scan, r, self._stacking, self._lmap)
	928	if isinstance(llbl, list) or isinstance(llbl, tuple):
	929	if 0 <= stackcount < len(llbl):
	930	# use user label
	931	llbl = llbl[stackcount]
	932	else:
	933	# get default label
	934	llbl = self._get_label(scan, r, self._stacking, None)
	935	self._plotter.set_line(label=llbl)
[1023]	936	plotit = self._plotter.plot
	937	if self._hist: plotit = self._plotter.hist
[1146]	938	if len(x) > 0:
	939	plotit(x,y)
	940	xlim= self._minmaxx or [min(x),max(x)]
	941	allxlim += xlim
	942	ylim= self._minmaxy or [ma.minimum(y),ma.maximum(y)]
	943	allylim += ylim
[1562]	944	else:
	945	xlim = self._minmaxx or []
	946	allxlim += xlim
	947	ylim= self._minmaxy or []
	948	allylim += ylim
[920]	949	stackcount += 1
	950	# last in colour stack -> autoscale x
[1562]	951	if stackcount == nstack and len(allxlim) > 0:
[920]	952	allxlim.sort()
[1446]	953	self._plotter.subplots[panelcount-1]['axes'].set_xlim([allxlim[0],allxlim[-1]])
[920]	954	# clear
	955	allxlim =[]
	956
	957	newpanel = False
	958	a0=a
	959	b0=b
	960	# ignore following rows
	961	if (panelcount == n) and (stackcount == nstack):
[1018]	962	# last panel -> autoscale y if ganged
[1562]	963	if rcParams['plotter.ganged'] and len(allylim) > 0:
[1018]	964	allylim.sort()
	965	self._plotter.set_limits(ylim=[allylim[0],allylim[-1]])
[998]	966	break
[920]	967	r+=1 # next row
[947]	968	#reset the selector to the scantable's original
	969	scan.set_selection(savesel)
[1757]	970
	971	#temporary switch-off for older matplotlib
	972	#if self._fp is not None:
	973	if self._fp is not None and getattr(self._plotter.figure,'findobj',False):
	974	for o in self._plotter.figure.findobj(Text):
	975	o.set_fontproperties(self._fp)
[920]	976
[1757]	977	def set_selection(self, selection=None, refresh=True, **kw):
[1698]	978	"""
	979	Parameters:
	980	selection: a selector object (default unset the selection)
	981	refresh: True (default) or False. If True, the plot is
	982	replotted based on the new parameter setting(s).
	983	Otherwise,the parameter(s) are set without replotting.
	984	"""
[1757]	985	if selection is None:
	986	# reset
	987	if len(kw) == 0:
	988	self._selection = selector()
	989	else:
	990	# try keywords
	991	for k in kw:
	992	if k not in selector.fields:
	993	raise KeyError("Invalid selection key '%s', valid keys are %s" % (k, selector.fields))
	994	self._selection = selector(**kw)
	995	elif isinstance(selection, selector):
	996	self._selection = selection
	997	else:
	998	raise TypeError("'selection' is not of type selector")
	999
[920]	1000	d0 = {'s': 'SCANNO', 'b': 'BEAMNO', 'i':'IFNO',
	1001	'p': 'POLNO', 'c': 'CYCLENO', 't' : 'TIME' }
	1002	order = [d0[self._panelling],d0[self._stacking]]
[947]	1003	self._selection.set_order(order)
[1698]	1004	if refresh and self._data: self.plot(self._data)
[920]	1005
	1006	def _get_selected_n(self, scan):
[1148]	1007	d1 = {'b': scan.getbeamnos, 's': scan.getscannos,
	1008	'i': scan.getifnos, 'p': scan.getpolnos, 't': scan.ncycle }
	1009	d2 = { 'b': self._selection.get_beams(),
	1010	's': self._selection.get_scans(),
	1011	'i': self._selection.get_ifs(),
	1012	'p': self._selection.get_pols(),
	1013	't': self._selection.get_cycles() }
[920]	1014	n = d2[self._panelling] or d1[self._panelling]()
	1015	nstack = d2[self._stacking] or d1[self._stacking]()
	1016	return n,nstack
	1017
	1018	def _get_label(self, scan, row, mode, userlabel=None):
[1153]	1019	if isinstance(userlabel, list) and len(userlabel) == 0:
	1020	userlabel = " "
[947]	1021	pms = dict(zip(self._selection.get_pols(),self._selection.get_poltypes()))
[920]	1022	if len(pms):
	1023	poleval = scan._getpollabel(scan.getpol(row),pms[scan.getpol(row)])
	1024	else:
	1025	poleval = scan._getpollabel(scan.getpol(row),scan.poltype())
	1026	d = {'b': "Beam "+str(scan.getbeam(row)),
[1714]	1027	#'s': scan._getsourcename(row),
	1028	's': "Scan "+str(scan.getscan(row))+\
	1029	" ("+str(scan._getsourcename(row))+")",
[920]	1030	'i': "IF"+str(scan.getif(row)),
[964]	1031	'p': poleval,
[1175]	1032	't': str(scan.get_time(row)) }
[920]	1033	return userlabel or d[mode]
[1153]	1034
[1446]	1035	def plotazel(self, scan=None, outfile=None):
[1757]	1036	#def plotazel(self):
[1389]	1037	"""
[1757]	1038	plot azimuth and elevation versus time of a scantable
[1389]	1039	"""
[1757]	1040	from matplotlib import pylab as PL
	1041	from matplotlib.dates import DateFormatter, timezone
	1042	from matplotlib.dates import HourLocator, MinuteLocator,SecondLocator, DayLocator
[1389]	1043	from matplotlib.ticker import MultipleLocator
[1757]	1044	from numpy import array, pi
[1389]	1045	self._data = scan
[1446]	1046	self._outfile = outfile
[1457]	1047	dates = self._data.get_time(asdatetime=True)
[1389]	1048	t = PL.date2num(dates)
	1049	tz = timezone('UTC')
	1050	PL.cla()
[1757]	1051	PL.ioff()
[1389]	1052	PL.clf()
[1723]	1053	# Adjust subplot layouts
	1054	if len(self._panellayout) !=6: self.set_panellayout(refresh=False)
	1055	lef, bot, rig, top, wsp, hsp = self._panellayout
	1056	PL.gcf().subplots_adjust(left=lef,bottom=bot,right=rig,top=top,
	1057	wspace=wsp,hspace=hsp)
	1058
[1389]	1059	tdel = max(t) - min(t)
	1060	ax = PL.subplot(2,1,1)
	1061	el = array(self._data.get_elevation())*180./pi
	1062	PL.ylabel('El [deg.]')
	1063	dstr = dates[0].strftime('%Y/%m/%d')
	1064	if tdel > 1.0:
	1065	dstr2 = dates[len(dates)-1].strftime('%Y/%m/%d')
	1066	dstr = dstr + " - " + dstr2
	1067	majloc = DayLocator()
	1068	minloc = HourLocator(range(0,23,12))
	1069	timefmt = DateFormatter("%b%d")
[1757]	1070	elif tdel > 24./60.:
	1071	timefmt = DateFormatter('%H:%M')
	1072	majloc = HourLocator()
	1073	minloc = MinuteLocator(30)
[1389]	1074	else:
[1757]	1075	timefmt = DateFormatter('%H:%M')
	1076	majloc = MinuteLocator(interval=5)
	1077	minloc = SecondLocator(30)
	1078
[1389]	1079	PL.title(dstr)
[1446]	1080	if tdel == 0.0:
	1081	th = (t - PL.floor(t))*24.0
	1082	PL.plot(th,el,'o',markersize=2, markerfacecolor='b', markeredgecolor='b')
	1083	else:
	1084	PL.plot_date(t,el,'o', markersize=2, markerfacecolor='b', markeredgecolor='b',tz=tz)
	1085	#ax.grid(True)
	1086	ax.xaxis.set_major_formatter(timefmt)
	1087	ax.xaxis.set_major_locator(majloc)
	1088	ax.xaxis.set_minor_locator(minloc)
[1389]	1089	ax.yaxis.grid(True)
	1090	yloc = MultipleLocator(30)
	1091	ax.set_ylim(0,90)
	1092	ax.yaxis.set_major_locator(yloc)
	1093	if tdel > 1.0:
	1094	labels = ax.get_xticklabels()
	1095	# PL.setp(labels, fontsize=10, rotation=45)
	1096	PL.setp(labels, fontsize=10)
[1446]	1097
[1389]	1098	# Az plot
	1099	az = array(self._data.get_azimuth())*180./pi
	1100	if min(az) < 0:
	1101	for irow in range(len(az)):
	1102	if az[irow] < 0: az[irow] += 360.0
	1103
[1757]	1104	ax2 = PL.subplot(2,1,2)
[1446]	1105	#PL.xlabel('Time (UT [hour])')
[1389]	1106	PL.ylabel('Az [deg.]')
[1446]	1107	if tdel == 0.0:
	1108	PL.plot(th,az,'o',markersize=2, markeredgecolor='b',markerfacecolor='b')
	1109	else:
	1110	PL.plot_date(t,az,'o', markersize=2,markeredgecolor='b',markerfacecolor='b',tz=tz)
[1757]	1111	ax2.xaxis.set_major_formatter(timefmt)
	1112	ax2.xaxis.set_major_locator(majloc)
	1113	ax2.xaxis.set_minor_locator(minloc)
	1114	#ax2.grid(True)
	1115	ax2.set_ylim(0,360)
	1116	ax2.yaxis.grid(True)
[1389]	1117	#hfmt = DateFormatter('%H')
	1118	#hloc = HourLocator()
	1119	yloc = MultipleLocator(60)
[1757]	1120	ax2.yaxis.set_major_locator(yloc)
[1389]	1121	if tdel > 1.0:
[1757]	1122	labels = ax2.get_xticklabels()
[1389]	1123	PL.setp(labels, fontsize=10)
[1446]	1124	PL.xlabel('Time (UT [day])')
	1125	else:
	1126	PL.xlabel('Time (UT [hour])')
	1127
[1757]	1128	PL.ion()
[1389]	1129	PL.draw()
[1446]	1130	if (self._outfile is not None):
	1131	PL.savefig(self._outfile)
[1389]	1132
[1446]	1133	def plotpointing(self, scan=None, outfile=None):
[1757]	1134	#def plotpointing(self):
[1389]	1135	"""
	1136	plot telescope pointings
	1137	"""
[1757]	1138	from matplotlib import pylab as PL
	1139	from numpy import array, pi
[1389]	1140	self._data = scan
[1446]	1141	self._outfile = outfile
[1389]	1142	dir = array(self._data.get_directionval()).transpose()
	1143	ra = dir[0]*180./pi
	1144	dec = dir[1]*180./pi
	1145	PL.cla()
[1446]	1146	#PL.ioff()
[1389]	1147	PL.clf()
[1723]	1148	# Adjust subplot layouts
	1149	if len(self._panellayout) !=6: self.set_panellayout(refresh=False)
	1150	lef, bot, rig, top, wsp, hsp = self._panellayout
	1151	PL.gcf().subplots_adjust(left=lef,bottom=bot,right=rig,top=top,
	1152	wspace=wsp,hspace=hsp)
[1732]	1153	ax = PL.gca()
	1154	#ax = PL.axes([0.1,0.1,0.8,0.8])
	1155	#ax = PL.axes([0.1,0.1,0.8,0.8])
[1389]	1156	ax.set_aspect('equal')
[1757]	1157	PL.plot(ra, dec, 'b,')
[1389]	1158	PL.xlabel('RA [deg.]')
	1159	PL.ylabel('Declination [deg.]')
	1160	PL.title('Telescope pointings')
	1161	[xmin,xmax,ymin,ymax] = PL.axis()
	1162	PL.axis([xmax,xmin,ymin,ymax])
[1446]	1163	#PL.ion()
[1389]	1164	PL.draw()
[1446]	1165	if (self._outfile is not None):
	1166	PL.savefig(self._outfile)
[1389]	1167
[1446]	1168	# plot total power data
	1169	# plotting in time is not yet implemented..
	1170	def plottp(self, scan=None, outfile=None):
	1171	if self._plotter.is_dead:
[1765]	1172	if hasattr(self._plotter.figmgr,'casabar'):
	1173	del self._plotter.figmgr.casabar
[1446]	1174	self._plotter = self._newplotter()
[1765]	1175	self._plotter.figmgr.casabar=self._newcasabar()
[1446]	1176	self._plotter.hold()
	1177	self._plotter.clear()
	1178	from asap import scantable
	1179	if not self._data and not scan:
	1180	msg = "Input is not a scantable"
	1181	if rcParams['verbose']:
[1612]	1182	#print msg
[1614]	1183	asaplog.push( msg )
	1184	print_log( 'ERROR' )
[1446]	1185	return
	1186	raise TypeError(msg)
	1187	if isinstance(scan, scantable):
	1188	if self._data is not None:
	1189	if scan != self._data:
	1190	self._data = scan
	1191	# reset
	1192	self._reset()
	1193	else:
	1194	self._data = scan
	1195	self._reset()
	1196	# ranges become invalid when abcissa changes?
	1197	#if self._abcunit and self._abcunit != self._data.get_unit():
	1198	# self._minmaxx = None
	1199	# self._minmaxy = None
	1200	# self._abcunit = self._data.get_unit()
	1201	# self._datamask = None
[1723]	1202
	1203	# Adjust subplot layouts
	1204	if len(self._panellayout) !=6: self.set_panellayout(refresh=False)
	1205	lef, bot, rig, top, wsp, hsp = self._panellayout
	1206	self._plotter.figure.subplots_adjust(
	1207	left=lef,bottom=bot,right=rig,top=top,wspace=wsp,hspace=hsp)
[1724]	1208	if self._plotter.figmgr.casabar: self._plotter.figmgr.casabar.disable_button()
[1446]	1209	self._plottp(self._data)
	1210	if self._minmaxy is not None:
	1211	self._plotter.set_limits(ylim=self._minmaxy)
	1212	self._plotter.release()
	1213	self._plotter.tidy()
	1214	self._plotter.show(hardrefresh=False)
	1215	print_log()
	1216	return
	1217
	1218	def _plottp(self,scan):
	1219	"""
	1220	private method for plotting total power data
	1221	"""
	1222	from matplotlib.numerix import ma, array, arange, logical_not
	1223	r=0
	1224	nr = scan.nrow()
	1225	a0,b0 = -1,-1
	1226	allxlim = []
	1227	allylim = []
	1228	y=[]
	1229	self._plotter.set_panels()
	1230	self._plotter.palette(0)
	1231	#title
	1232	#xlab = self._abcissa and self._abcissa[panelcount] \
	1233	# or scan._getabcissalabel()
	1234	#ylab = self._ordinate and self._ordinate[panelcount] \
	1235	# or scan._get_ordinate_label()
	1236	xlab = self._abcissa or 'row number' #or Time
	1237	ylab = self._ordinate or scan._get_ordinate_label()
	1238	self._plotter.set_axes('xlabel',xlab)
	1239	self._plotter.set_axes('ylabel',ylab)
	1240	lbl = self._get_label(scan, r, 's', self._title)
	1241	if isinstance(lbl, list) or isinstance(lbl, tuple):
	1242	# if 0 <= panelcount < len(lbl):
	1243	# lbl = lbl[panelcount]
	1244	# else:
	1245	# get default label
	1246	lbl = self._get_label(scan, r, self._panelling, None)
	1247	self._plotter.set_axes('title',lbl)
	1248	y=array(scan._get_column(scan._getspectrum,-1))
	1249	m = array(scan._get_column(scan._getmask,-1))
	1250	y = ma.masked_array(y,mask=logical_not(array(m,copy=False)))
	1251	x = arange(len(y))
	1252	# try to handle spectral data somewhat...
	1253	l,m = y.shape
	1254	if m > 1:
	1255	y=y.mean(axis=1)
	1256	plotit = self._plotter.plot
	1257	llbl = self._get_label(scan, r, self._stacking, None)
	1258	self._plotter.set_line(label=llbl)
	1259	if len(x) > 0:
	1260	plotit(x,y)
	1261
	1262
	1263	# forwards to matplotlib.Figure.text
	1264	def figtext(self, args, *kwargs):
	1265	"""
	1266	Add text to figure at location x,y (relative 0-1 coords).
	1267	This method forwards args and *kwargs to a Matplotlib method,
	1268	matplotlib.Figure.text.
	1269	See the method help for detailed information.
	1270	"""
	1271	self._plotter.text(args, *kwargs)
	1272	# end matplotlib.Figure.text forwarding function
	1273
[1723]	1274
	1275	# printing header information
	1276	def print_header(self, plot=True, fontsize=9, logger=False, selstr='', extrastr=''):
	1277	"""
	1278	print data (scantable) header on the plot and/or logger.
	1279	Parameters:
	1280	plot: whether or not print header info on the plot.
	1281	fontsize: header font size (valid only plot=True)
	1282	autoscale: whether or not autoscale the plot (valid only plot=True)
	1283	logger: whether or not print header info on the logger.
	1284	selstr: additional selection string (not verified)
	1285	extrastr: additional string to print (not verified)
	1286	"""
	1287	if not plot and not logger: return
	1288	if not self._data: raise RuntimeError("No scantable has been set yet.")
	1289	# Now header will be printed on plot and/or logger.
	1290	# Get header information and format it.
	1291	ssum=self._data.__str__()
	1292	# Print Observation header to the upper-left corner of plot
	1293	if plot:
[1757]	1294	headstr=[ssum[ssum.find('Observer:'):ssum.find('Flux Unit:')]]
	1295	headstr.append(ssum[ssum.find('Beams:'):ssum.find('Observer:')]
	1296	+ssum[ssum.find('Rest Freqs:'):ssum.find('Abcissa:')])
	1297	if extrastr != '': headstr[0]=extrastr+'\n'+headstr[0]
[1723]	1298	#headstr[1]='Data File: '+(filestr or 'unknown')+'\n'+headstr[1]
	1299	ssel='*Selections*\n'+(selstr+self._data.get_selection().__str__() or 'none')
	1300	headstr.append(ssel)
	1301	nstcol=len(headstr)
	1302
	1303	self._plotter.hold()
	1304	for i in range(nstcol):
	1305	self._plotter.figure.text(0.03+float(i)/nstcol,0.98,
	1306	headstr[i],
	1307	horizontalalignment='left',
	1308	verticalalignment='top',
	1309	fontsize=fontsize)
	1310	import time
	1311	self._plotter.figure.text(0.99,0.0,
	1312	time.strftime("%a %d %b %Y %H:%M:%S %Z"),
	1313	horizontalalignment='right',
	1314	verticalalignment='bottom',fontsize=8)
	1315	self._plotter.release()
[1757]	1316	del headstr, ssel
[1723]	1317	if logger:
	1318	asaplog.push("----------------\n Plot Summary\n----------------")
	1319	asaplog.push(extrastr)
	1320	asaplog.push(ssum[ssum.find('Beams:'):])
	1321	print_log()
	1322	del ssum
[1724]	1323
	1324

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