[1757] | 1 | //#---------------------------------------------------------------------------
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| 2 | //# NRODataset.cc: Base class for NRO dataset.
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| 3 | //#---------------------------------------------------------------------------
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| 4 | //# Copyright (C) 2000-2006
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| 5 | //# Associated Universities, Inc. Washington DC, USA.
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| 6 | //#
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| 7 | //# This library is free software; you can redistribute it and/or modify it
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| 8 | //# under the terms of the GNU Library General Public License as published by
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| 9 | //# the Free Software Foundation; either version 2 of the License, or (at your
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| 10 | //# option) any later version.
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| 11 | //#
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| 12 | //# This library is distributed in the hope that it will be useful, but WITHOUT
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| 13 | //# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
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| 14 | //# FITNESS FOR A PARTICULAR PURPOSE. See the GNU Library General Public
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| 15 | //# License for more details.
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| 16 | //#
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| 17 | //# You should have received a copy of the GNU Library General Public License
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| 18 | //# along with this library; if not, write to the Free Software Foundation,
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| 19 | //# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
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| 20 | //#
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| 21 | //# Correspondence concerning AIPS++ should be addressed as follows:
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| 22 | //# Internet email: aips2-request@nrao.edu.
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| 23 | //# Postal address: AIPS++ Project Office
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| 24 | //# National Radio Astronomy Observatory
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| 25 | //# 520 Edgemont Road
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| 26 | //# Charlottesville, VA 22903-2475 USA
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| 27 | //#
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| 28 | //# $Id$
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| 29 | //#---------------------------------------------------------------------------
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| 30 | //# Original: 2009/02/27, Takeshi Nakazato, NAOJ
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| 31 | //#---------------------------------------------------------------------------
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| 32 |
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| 33 | #include <atnf/PKSIO/NRODataset.h>
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| 34 | #include <casa/OS/Time.h>
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| 35 | #include <scimath/Mathematics/InterpolateArray1D.h>
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| 36 |
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| 37 | #include <math.h>
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| 38 | #include <fstream>
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| 39 |
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| 40 | //#include <casa/namespace.h>
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| 41 |
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| 42 | using namespace std ;
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| 43 |
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| 44 | //
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| 45 | // NRODataset
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| 46 | //
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| 47 | // Base class for NRO dataset.
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| 48 | //
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| 49 |
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| 50 | // constructor
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| 51 | NRODataset::NRODataset( string name )
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| 52 | {
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| 53 | LogIO os( LogOrigin( "NRODataset", "NRODataset()", WHERE ) ) ;
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| 54 |
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| 55 | // memory allocation
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| 56 | initialize() ;
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| 57 |
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| 58 | filename_ = name ;
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| 59 | fp_ = NULL ;
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| 60 | scanNum_ = 0 ;
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| 61 | rowNum_ = 0 ;
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| 62 | scanLen_ = 0 ;
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| 63 | dataLen_ = 0 ;
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| 64 | dataid_ = -1 ;
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| 65 |
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| 66 | // OS endian
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| 67 | int i = 1 ;
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| 68 | endian_ = -1 ;
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| 69 | if ( *reinterpret_cast<char *>(&i) == 1 ) {
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| 70 | endian_ = LITTLE_ENDIAN ;
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| 71 | os << LogIO::NORMAL << "LITTLE_ENDIAN " << LogIO::POST ;
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| 72 | }
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| 73 | else {
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| 74 | endian_ = BIG_ENDIAN ;
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| 75 | os << LogIO::NORMAL << "BIG_ENDIAN " << LogIO::POST ;
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| 76 | }
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| 77 | same_ = -1 ;
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| 78 | }
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| 79 |
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| 80 | // destructor
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| 81 | NRODataset::~NRODataset()
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| 82 | {
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| 83 | // release memory
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| 84 | releaseRecord() ;
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| 85 |
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| 86 | // close file
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| 87 | close() ;
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| 88 | }
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| 89 |
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| 90 | // data initialization
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| 91 | void NRODataset::initialize()
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| 92 | {
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| 93 | datasize_ = sizeof( char ) * 8 // LOFIL
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| 94 | + sizeof( char ) * 8 // VER
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| 95 | + sizeof( char ) * 16 // GROUP
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| 96 | + sizeof( char ) * 16 // PROJ
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| 97 | + sizeof( char ) * 24 // SCHED
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| 98 | + sizeof( char ) * 40 // OBSVR
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| 99 | + sizeof( char ) * 16 // LOSTM
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| 100 | + sizeof( char ) * 16 // LOETM
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| 101 | + sizeof( int ) * 2 // ARYNM, NSCAN
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| 102 | + sizeof( char ) * 120 // TITLE
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| 103 | + sizeof( char ) * 16 // OBJ
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| 104 | + sizeof( char ) * 8 // EPOCH
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| 105 | + sizeof( double ) * 4 // RA0, DEC0, GLNG0, GLAT0
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| 106 | + sizeof( int ) * 2 // NCALB, SCNCD
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| 107 | + sizeof( char ) * 120 // SCMOD
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| 108 | + sizeof( double ) // URVEL
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| 109 | + sizeof( char ) * 4 // VREF
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| 110 | + sizeof( char ) * 4 // VDEF
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| 111 | + sizeof( char ) * 8 // SWMOD
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| 112 | + sizeof( double ) * 8 // FRQSW, DBEAM, MLTOF, CMTQ, CMTE, CMTSOM, CMTNODE, CMTI
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| 113 | + sizeof( char ) * 24 // CMTTM
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| 114 | + sizeof( double ) * 6 // SBDX, SBDY, SBDZ1, SBDZ2, DAZP, DELP
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| 115 | + sizeof( int ) * 4 // CHBIND, NUMCH, CHMIN, CHMAX
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| 116 | + sizeof( double ) * 3 // ALCTM, IPTIM, PA
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| 117 | + sizeof( int ) * 3 // SCNLEN, SBIND, IBIT
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| 118 | + sizeof( char ) * 8 ; // SITE
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| 119 |
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| 120 | // NRODataRecord
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| 121 | record_ = new NRODataRecord() ;
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| 122 | record_->LDATA = NULL ;
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| 123 | }
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| 124 |
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| 125 | void NRODataset::convertEndian( int &value )
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| 126 | {
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| 127 | char volatile *first = reinterpret_cast<char volatile *>( &value ) ;
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| 128 | char volatile *last = first + sizeof( int ) ;
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| 129 | std::reverse( first, last ) ;
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| 130 | }
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| 131 |
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| 132 | void NRODataset::convertEndian( float &value )
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| 133 | {
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| 134 | char volatile *first = reinterpret_cast<char volatile *>( &value ) ;
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| 135 | char volatile *last = first + sizeof( float ) ;
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| 136 | std::reverse( first, last ) ;
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| 137 | }
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| 138 |
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| 139 | void NRODataset::convertEndian( double &value )
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| 140 | {
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| 141 | char volatile *first = reinterpret_cast<char volatile *>( &value ) ;
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| 142 | char volatile *last = first + sizeof( double ) ;
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| 143 | std::reverse( first, last ) ;
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| 144 | }
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| 145 |
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| 146 | int NRODataset::readHeader( char *v, int size )
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| 147 | {
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| 148 | if ( (int)( fread( v, 1, size, fp_ ) ) != size ) {
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| 149 | return -1 ;
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| 150 | }
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| 151 | return 0 ;
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| 152 | }
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| 153 |
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| 154 | int NRODataset::readHeader( int &v, int b )
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| 155 | {
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| 156 | if ( fread( &v, 1, sizeof(int), fp_ ) != sizeof(int) ) {
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| 157 | return -1 ;
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| 158 | }
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| 159 |
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| 160 | if ( b == 0 )
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| 161 | convertEndian( v ) ;
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| 162 |
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| 163 | return 0 ;
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| 164 | }
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| 165 |
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| 166 | int NRODataset::readHeader( float &v, int b )
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| 167 | {
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| 168 | if ( fread( &v, 1, sizeof(float), fp_ ) != sizeof(float) ) {
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| 169 | return -1 ;
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| 170 | }
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| 171 |
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| 172 | if ( b == 0 )
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| 173 | convertEndian( v ) ;
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| 174 |
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| 175 | return 0 ;
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| 176 | }
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| 177 |
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| 178 | int NRODataset::readHeader( double &v, int b )
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| 179 | {
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| 180 | if ( fread( &v, 1, sizeof(double), fp_ ) != sizeof(double) ) {
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| 181 | return -1 ;
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| 182 | }
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| 183 |
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| 184 | if ( b == 0 )
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| 185 | convertEndian( v ) ;
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| 186 |
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| 187 | return 0 ;
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| 188 | }
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| 189 |
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| 190 | void NRODataset::convertEndian( NRODataRecord *r )
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| 191 | {
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| 192 | convertEndian( r->ISCAN ) ;
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| 193 | convertEndian( r->DSCX ) ;
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| 194 | convertEndian( r->DSCY ) ;
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| 195 | convertEndian( r->SCX ) ;
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| 196 | convertEndian( r->SCY ) ;
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| 197 | convertEndian( r->PAZ ) ;
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| 198 | convertEndian( r->PEL ) ;
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| 199 | convertEndian( r->RAZ ) ;
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| 200 | convertEndian( r->REL ) ;
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| 201 | convertEndian( r->XX ) ;
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| 202 | convertEndian( r->YY ) ;
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| 203 | convertEndian( r->TEMP ) ;
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| 204 | convertEndian( r->PATM ) ;
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| 205 | convertEndian( r->PH2O ) ;
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| 206 | convertEndian( r->VWIND ) ;
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| 207 | convertEndian( r->DWIND ) ;
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| 208 | convertEndian( r->TAU ) ;
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| 209 | convertEndian( r->TSYS ) ;
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| 210 | convertEndian( r->BATM ) ;
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| 211 | convertEndian( r->LINE ) ;
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| 212 | for ( int i = 0 ; i < 4 ; i++ )
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| 213 | convertEndian( r->IDMY1[i] ) ;
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| 214 | convertEndian( r->VRAD ) ;
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| 215 | convertEndian( r->FREQ0 ) ;
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| 216 | convertEndian( r->FQTRK ) ;
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| 217 | convertEndian( r->FQIF1 ) ;
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| 218 | convertEndian( r->ALCV ) ;
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| 219 | for ( int i = 0 ; i < 2 ; i++ )
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| 220 | for ( int j = 0 ; j < 2 ; j++ )
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| 221 | convertEndian( r->OFFCD[i][j] ) ;
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| 222 | convertEndian( r->IDMY0 ) ;
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| 223 | convertEndian( r->IDMY2 ) ;
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| 224 | convertEndian( r->DPFRQ ) ;
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| 225 | convertEndian( r->SFCTR ) ;
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| 226 | convertEndian( r->ADOFF ) ;
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| 227 | }
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| 228 |
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| 229 | void NRODataset::releaseRecord()
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| 230 | {
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| 231 | if ( record_ ) {
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| 232 | if ( record_->LDATA != NULL ) {
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| 233 | delete record_->LDATA ;
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| 234 | record_->LDATA = NULL ;
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| 235 | }
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| 236 | delete record_ ;
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| 237 | record_ = NULL ;
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| 238 | }
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| 239 | dataid_ = -1 ;
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| 240 | }
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| 241 |
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| 242 | // Get specified scan
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| 243 | NRODataRecord *NRODataset::getRecord( int i )
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| 244 | {
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| 245 | LogIO os( LogOrigin( "NRODataset", "getRecord()", WHERE ) ) ;
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| 246 |
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| 247 | // DEBUG
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| 248 | //cout << "NRODataset::getRecord() Start " << i << endl ;
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| 249 | //
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| 250 | if ( i < 0 || i >= rowNum_ ) {
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| 251 | //cerr << "NRODataset::getRecord() data index out of range." << endl ;
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| 252 | os << LogIO::SEVERE << "data index " << i << " out of range. return NULL." << LogIO::POST ;
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| 253 | return NULL ;
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| 254 | }
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| 255 |
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| 256 | if ( i == dataid_ ) {
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| 257 | return record_ ;
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| 258 | }
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| 259 |
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| 260 | // DEBUG
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| 261 | //cout << "NRODataset::getData() Get new dataset" << endl ;
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| 262 | //
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| 263 | // read data
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| 264 | int status = fillRecord( i ) ;
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| 265 | if ( status == 0 ) {
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| 266 | dataid_ = i ;
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| 267 | }
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| 268 | else {
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| 269 | //cerr << "NRODataset::getRecord() error while reading data " << i << endl ;
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| 270 | os << LogIO::SEVERE << "error while reading data " << i << ". return NULL." << LogIO::POST ;
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| 271 | dataid_ = -1 ;
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| 272 | return NULL ;
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| 273 | }
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| 274 |
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| 275 | return record_ ;
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| 276 | }
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| 277 |
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| 278 | int NRODataset::fillRecord( int i )
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| 279 | {
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| 280 | LogIO os( LogOrigin( "NRODataset", "fillRecord()", WHERE ) ) ;
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| 281 |
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| 282 | int status = 0 ;
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| 283 |
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| 284 | status = open() ;
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| 285 | if ( status != 0 )
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| 286 | return status ;
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| 287 |
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| 288 |
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| 289 | // fill NRODataset
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| 290 | int offset = getDataSize() + scanLen_ * i ;
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| 291 | // DEBUG
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| 292 | //cout << "NRODataset::fillRecord() offset (header) = " << offset << endl ;
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| 293 | //cout << "NRODataset::fillRecord() sizeof(NRODataRecord) = " << sizeof( NRODataRecord ) << " byte" << endl ;
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| 294 | fseek( fp_, offset, SEEK_SET ) ;
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| 295 | if ( (int)fread( record_, 1, SCAN_HEADER_SIZE, fp_ ) != SCAN_HEADER_SIZE ) {
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| 296 | //cerr << "Failed to read scan header: " << i << endl ;
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| 297 | os << LogIO::SEVERE << "Failed to read scan header for " << i << "th row." << LogIO::POST ;
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| 298 | return -1 ;
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| 299 | }
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| 300 | if ( (int)fread( record_->LDATA, 1, dataLen_, fp_ ) != dataLen_ ) {
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| 301 | //cerr << "Failed to read spectral data: " << i << endl ;
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| 302 | os << LogIO::SEVERE << "Failed to read spectral data for " << i << "th row." << LogIO::POST ;
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| 303 | return -1 ;
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| 304 | }
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| 305 |
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| 306 | if ( same_ == 0 ) {
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| 307 | convertEndian( record_ ) ;
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| 308 | }
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| 309 |
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| 310 | // DWIND unit conversion (deg -> rad)
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| 311 | record_->DWIND = record_->DWIND * M_PI / 180.0 ;
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| 312 |
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| 313 | return status ;
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| 314 | }
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| 315 |
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| 316 | // open
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| 317 | int NRODataset::open()
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| 318 | {
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| 319 | int status = 0 ;
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| 320 |
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| 321 | if ( fp_ == NULL ) {
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| 322 | if ( (fp_ = fopen( filename_.c_str(), "rb" )) == NULL )
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| 323 | status = -1 ;
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| 324 | else
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| 325 | status = 0 ;
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| 326 | }
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| 327 |
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| 328 | return status ;
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| 329 | }
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| 330 |
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| 331 | // close
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| 332 | void NRODataset::close()
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| 333 | {
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| 334 | // DEBUG
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| 335 | //cout << "NRODataset::close() close file" << endl ;
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| 336 | //
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| 337 | if ( fp_ != NULL )
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| 338 | fclose( fp_ ) ;
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| 339 | fp_ = NULL ;
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| 340 | }
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| 341 |
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| 342 | // get spectrum
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| 343 | vector< vector<double> > NRODataset::getSpectrum()
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| 344 | {
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| 345 | vector< vector<double> > spec;
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| 346 |
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| 347 | for ( int i = 0 ; i < rowNum_ ; i++ ) {
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| 348 | spec.push_back( getSpectrum( i ) ) ;
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| 349 | }
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| 350 |
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| 351 | return spec ;
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| 352 | }
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| 353 |
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| 354 | vector<double> NRODataset::getSpectrum( int i )
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| 355 | {
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| 356 | LogIO os( LogOrigin( "NRODataset", "getSpectrum", WHERE ) ) ;
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| 357 |
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| 358 | // DEBUG
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| 359 | //cout << "NRODataset::getSpectrum() start process (" << i << ")" << endl ;
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| 360 | //
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| 361 | // size of spectrum is not chmax_ but dataset_->getNCH() after binding
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| 362 | int nchan = NUMCH ;
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| 363 | vector<double> spec( chmax_, 0.0 ) ; // spectrum "before" binding
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| 364 | vector<double> bspec( nchan, 0.0 ) ; // spectrum "after" binding
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| 365 | // DEBUG
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| 366 | //cout << "NRODataset::getSpectrum() nchan = " << nchan << " chmax_ = " << chmax_ << endl ;
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| 367 | //
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| 368 |
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| 369 | NRODataRecord *record = getRecord( i ) ;
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| 370 |
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| 371 | int bit = IBIT ; // fixed to 12 bit
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| 372 | double scale = record->SFCTR ;
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| 373 | // DEBUG
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| 374 | //cout << "NRODataset::getSpectrum() scale = " << scale << endl ;
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| 375 | //
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| 376 | double offset = record->ADOFF ;
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| 377 | // DEBUG
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| 378 | //cout << "NRODataset::getSpectrum() offset = " << offset << endl ;
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| 379 | //
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| 380 | if ( ( scale == 0.0 ) && ( offset == 0.0 ) ) {
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| 381 | //cerr << "NRODataset::getSpectrum() zero spectrum (" << i << ")" << endl ;
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| 382 | return bspec ;
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| 383 | }
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| 384 | char *cdata = record->LDATA ;
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| 385 | vector<double> mscale = MLTSCF ;
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| 386 | double dscale = mscale[getIndex( i )] ;
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| 387 | int cbind = CHBIND ;
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| 388 | int chmin = CHMIN ;
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| 389 |
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| 390 | // char -> int
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| 391 | vector<int> ispec( chmax_, 0 ) ;
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| 392 | union SharedMemory {
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| 393 | int ivalue ;
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| 394 | unsigned char cbuf[4] ;
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| 395 | } ;
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| 396 | SharedMemory u ;
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| 397 | int j = 0 ;
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| 398 | char ctmp = 0x00 ;
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| 399 | int sw = 0 ;
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| 400 | for ( int i = 0 ; i < chmax_ ; i++ ) {
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| 401 | if ( bit == 12 ) { // 12 bit qunatization
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| 402 | u.ivalue = 0 ;
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| 403 |
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| 404 | if ( endian_ == BIG_ENDIAN ) {
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| 405 | // big endian
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| 406 | if ( sw == 0 ) {
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| 407 | char c0 = (cdata[j] >> 4) & 0x0f ;
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| 408 | char c1 = ((cdata[j] << 4) & 0xf0) | ((cdata[j+1] >> 4) & 0x0f) ;
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| 409 | ctmp = cdata[j+1] & 0x0f ;
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| 410 | u.cbuf[2] = c0 ;
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| 411 | u.cbuf[3] = c1 ;
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| 412 | j += 2 ;
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| 413 | sw = 1 ;
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| 414 | }
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| 415 | else if ( sw == 1 ) {
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| 416 | u.cbuf[2] = ctmp ;
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| 417 | u.cbuf[3] = cdata[j] ;
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| 418 | j++ ;
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| 419 | sw = 0 ;
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| 420 | }
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| 421 | }
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| 422 | else if ( endian_ == LITTLE_ENDIAN ) {
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| 423 | // little endian
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| 424 | if ( sw == 0 ) {
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| 425 | char c0 = (cdata[j] >> 4) & 0x0f ;
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| 426 | char c1 = ((cdata[j] << 4) & 0xf0) | ((cdata[j+1] >> 4) & 0x0f) ;
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| 427 | ctmp = cdata[j+1] & 0x0f ;
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| 428 | u.cbuf[1] = c0 ;
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| 429 | u.cbuf[0] = c1 ;
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| 430 | j += 2 ;
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| 431 | sw = 1 ;
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| 432 | }
|
---|
| 433 | else if ( sw == 1 ) {
|
---|
| 434 | u.cbuf[1] = ctmp ;
|
---|
| 435 | u.cbuf[0] = cdata[j] ;
|
---|
| 436 | j++ ;
|
---|
| 437 | sw = 0 ;
|
---|
| 438 | }
|
---|
| 439 | }
|
---|
| 440 | }
|
---|
| 441 |
|
---|
| 442 | ispec[i] = u.ivalue ;
|
---|
| 443 | if ( ( ispec[i] < 0 ) || ( ispec[i] > 4096 ) ) {
|
---|
| 444 | //cerr << "NRODataset::getSpectrum() ispec[" << i << "] is out of range" << endl ;
|
---|
| 445 | os << LogIO::SEVERE << "ispec[" << i << "] is out of range" << LogIO::EXCEPTION ;
|
---|
| 446 | return bspec ;
|
---|
| 447 | }
|
---|
| 448 | // DEBUG
|
---|
| 449 | //cout << "NRODataset::getSpectrum() ispec[" << i << "] = " << ispec[i] << endl ;
|
---|
| 450 | //
|
---|
| 451 | }
|
---|
| 452 |
|
---|
| 453 | // int -> double
|
---|
| 454 | for ( int i = 0 ; i < chmax_ ; i++ ) {
|
---|
| 455 | spec[i] = (double)( ispec[i] * scale + offset ) * dscale ;
|
---|
| 456 | // DEBUG
|
---|
| 457 | //cout << "NRODataset::getSpectrum() spec[" << i << "] = " << spec[i] << endl ;
|
---|
| 458 | //
|
---|
| 459 | }
|
---|
| 460 |
|
---|
| 461 | // channel binding
|
---|
| 462 | if ( cbind != 1 ) {
|
---|
| 463 | int k = chmin ;
|
---|
| 464 | double sum0 = 0 ;
|
---|
| 465 | double sum1 = 0 ;
|
---|
| 466 | for ( int i = 0 ; i < nchan ; i++ ) {
|
---|
| 467 | for ( int j = k ; j < k + cbind ; j++ ) {
|
---|
| 468 | sum0 += spec[k] ;
|
---|
| 469 | sum1++ ;
|
---|
| 470 | }
|
---|
| 471 | bspec[i] = sum0 / sum1 ;
|
---|
| 472 | k += cbind ;
|
---|
| 473 | // DEBUG
|
---|
| 474 | //cout << "NRODataset::getSpectrum() bspec[" << i << "] = " << bspec[i] << endl ;
|
---|
| 475 | //
|
---|
| 476 | }
|
---|
| 477 | }
|
---|
| 478 | else {
|
---|
| 479 | for ( int i = 0 ; i < nchan ; i++ )
|
---|
| 480 | bspec[i] = spec[i] ;
|
---|
| 481 | }
|
---|
| 482 |
|
---|
| 483 | // DEBUG
|
---|
| 484 | //cout << "NRODataset::getSpectrum() end process" << endl ;
|
---|
| 485 | //
|
---|
| 486 |
|
---|
| 487 | return bspec ;
|
---|
| 488 | }
|
---|
| 489 |
|
---|
| 490 | int NRODataset::getIndex( int irow )
|
---|
| 491 | {
|
---|
| 492 | // DEBUG
|
---|
| 493 | //cout << "NRODataset::getIndex() start" << endl ;
|
---|
| 494 | //
|
---|
| 495 | NRODataRecord *record = getRecord( irow ) ;
|
---|
| 496 | string str = record->ARRYT ;
|
---|
| 497 | // DEBUG
|
---|
| 498 | //cout << "NRODataset::getIndex() str = " << str << endl ;
|
---|
| 499 | //
|
---|
| 500 | string substr = str.substr( 1, 2 ) ;
|
---|
| 501 | unsigned int index = (unsigned int)(atoi( substr.c_str() ) - 1) ;
|
---|
| 502 | // DEBUG
|
---|
| 503 | //cout << "NRODataset::getIndex() irow = " << irow << " index = " << index << endl ;
|
---|
| 504 | //
|
---|
| 505 |
|
---|
| 506 | // DEBUG
|
---|
| 507 | //cout << "NRODataset::getIndex() end" << endl ;
|
---|
| 508 | //
|
---|
| 509 | return index ;
|
---|
| 510 | }
|
---|
| 511 |
|
---|
| 512 | int NRODataset::getPolarizationNum()
|
---|
| 513 | {
|
---|
| 514 | // DEBUG
|
---|
| 515 | //cout << "NRODataset::getPolarizationNum() start process" << endl ;
|
---|
| 516 | //
|
---|
| 517 | int npol = 0 ;
|
---|
| 518 |
|
---|
| 519 | vector<string> type( 2 ) ;
|
---|
| 520 | type[0] = "CIRC" ;
|
---|
| 521 | type[1] = "LINR" ;
|
---|
| 522 | vector<double> crot ;
|
---|
| 523 | vector<double> lagl ;
|
---|
| 524 | //vector<int> ntype( 2, 0 ) ;
|
---|
| 525 |
|
---|
| 526 | unsigned int imax = rowNum_ ;
|
---|
| 527 | for ( unsigned int i = 0 ; i < imax ; i++ ) {
|
---|
| 528 | int index = getIndex( i ) ;
|
---|
| 529 | // DEBUG
|
---|
| 530 | //cout <<"NRODataset::getPolarizationNum() index = " << index << endl ;
|
---|
| 531 | //
|
---|
| 532 | if ( POLTP[index] == type[0] ) {
|
---|
| 533 | if( count( crot.begin(), crot.end(), POLDR[index] ) != 0 ) {
|
---|
| 534 | crot.push_back( POLDR[index] ) ;
|
---|
| 535 | npol++ ;
|
---|
| 536 | }
|
---|
| 537 | //ntype[0] = 1 ;
|
---|
| 538 | }
|
---|
| 539 | else if ( POLTP[index] == type[1] ) {
|
---|
| 540 | if ( count( lagl.begin(), lagl.end(), POLAN[index] ) != 0 ) {
|
---|
| 541 | lagl.push_back( POLAN[index] ) ;
|
---|
| 542 | npol++ ;
|
---|
| 543 | }
|
---|
| 544 | //ntype[1] = 1 ;
|
---|
| 545 | }
|
---|
| 546 | }
|
---|
| 547 |
|
---|
| 548 | if ( npol == 0 )
|
---|
| 549 | npol = 1 ;
|
---|
| 550 |
|
---|
| 551 | // DEBUG
|
---|
| 552 | //cout << "NRODataset::getPolarizationNum() end process" << endl ;
|
---|
| 553 | //
|
---|
| 554 |
|
---|
| 555 | return npol ;
|
---|
| 556 | }
|
---|
| 557 |
|
---|
| 558 | vector<double> NRODataset::getStartIntTime()
|
---|
| 559 | {
|
---|
| 560 | vector<double> times ;
|
---|
| 561 | for ( int i = 0 ; i < rowNum_ ; i++ ) {
|
---|
| 562 | times.push_back( getStartIntTime( i ) ) ;
|
---|
| 563 | }
|
---|
| 564 | return times ;
|
---|
| 565 | }
|
---|
| 566 |
|
---|
| 567 | double NRODataset::getStartIntTime( int i )
|
---|
| 568 | {
|
---|
| 569 | NRODataRecord *record = getRecord( i ) ;
|
---|
| 570 |
|
---|
| 571 | char *t = record->LAVST ;
|
---|
| 572 | return getMJD( t ) ;
|
---|
| 573 | }
|
---|
| 574 |
|
---|
| 575 | double NRODataset::getMJD( char *time )
|
---|
| 576 | {
|
---|
| 577 | // TODO: should be checked which time zone the time depends on
|
---|
| 578 | // 2008/11/14 Takeshi Nakazato
|
---|
| 579 | string strStartTime( time ) ;
|
---|
| 580 | string strYear = strStartTime.substr( 0, 4 ) ;
|
---|
| 581 | string strMonth = strStartTime.substr( 4, 2 ) ;
|
---|
| 582 | string strDay = strStartTime.substr( 6, 2 ) ;
|
---|
| 583 | string strHour = strStartTime.substr( 8, 2 ) ;
|
---|
| 584 | string strMinute = strStartTime.substr( 10, 2 ) ;
|
---|
| 585 | string strSecond = strStartTime.substr( 12, strStartTime.size() - 12 ) ;
|
---|
| 586 | unsigned int year = atoi( strYear.c_str() ) ;
|
---|
| 587 | unsigned int month = atoi( strMonth.c_str() ) ;
|
---|
| 588 | unsigned int day = atoi( strDay.c_str() ) ;
|
---|
| 589 | unsigned int hour = atoi( strHour.c_str() ) ;
|
---|
| 590 | unsigned int minute = atoi( strMinute.c_str() ) ;
|
---|
| 591 | double second = atof( strSecond.c_str() ) ;
|
---|
| 592 | Time t( year, month, day, hour, minute, second ) ;
|
---|
| 593 |
|
---|
| 594 | return t.modifiedJulianDay() ;
|
---|
| 595 | }
|
---|
| 596 |
|
---|
| 597 | vector<bool> NRODataset::getIFs()
|
---|
| 598 | {
|
---|
| 599 | vector<bool> v ;
|
---|
| 600 | vector< vector<double> > fref ;
|
---|
| 601 | vector< vector<double> > chcal = CHCAL ;
|
---|
| 602 | vector<double> f0cal = F0CAL ;
|
---|
| 603 | vector<double> beres = BERES ;
|
---|
| 604 | for ( int i = 0 ; i < rowNum_ ; i++ ) {
|
---|
| 605 | vector<double> f( 4, 0 ) ;
|
---|
| 606 | uInt index = getIndex( i ) ;
|
---|
| 607 | f[0] = chcal[index][0] ;
|
---|
| 608 | f[1] = f0cal[index] ;
|
---|
| 609 | f[2] = beres[index] ;
|
---|
| 610 | if ( f[0] != 0. ) {
|
---|
| 611 | f[1] = f[1] - f[0] * f[2] ;
|
---|
| 612 | }
|
---|
| 613 | NRODataRecord *record = getRecord( i ) ;
|
---|
| 614 | f[3] = record->FREQ0 ;
|
---|
| 615 | if ( v.size() == 0 ) {
|
---|
| 616 | v.push_back( True ) ;
|
---|
| 617 | fref.push_back( f ) ;
|
---|
| 618 | }
|
---|
| 619 | else {
|
---|
| 620 | bool b = true ;
|
---|
| 621 | int fsize = fref.size() ;
|
---|
| 622 | for ( int j = 0 ; j < fsize ; j++ ) {
|
---|
| 623 | if ( fref[j][1] == f[1] && fref[j][2] == f[2] && fref[j][3] == f[3] ) {
|
---|
| 624 | b = false ;
|
---|
| 625 | }
|
---|
| 626 | }
|
---|
| 627 | if ( b ) {
|
---|
| 628 | v.push_back( True ) ;
|
---|
| 629 | fref.push_back( f ) ;
|
---|
| 630 | }
|
---|
| 631 | }
|
---|
| 632 | }
|
---|
| 633 |
|
---|
| 634 |
|
---|
| 635 | // DEBUG
|
---|
| 636 | //cout << "NRODataset::getIFs() number of IF is " << v.size() << endl ;
|
---|
| 637 | //
|
---|
| 638 |
|
---|
| 639 | return v ;
|
---|
| 640 | }
|
---|
| 641 |
|
---|
| 642 | vector<double> NRODataset::getFrequencies( int i )
|
---|
| 643 | {
|
---|
| 644 | // return value
|
---|
| 645 | // v[0] reference channel
|
---|
| 646 | // v[1] reference frequency
|
---|
| 647 | // v[2] frequency increment
|
---|
| 648 | vector<double> v( 3, 0.0 ) ;
|
---|
| 649 |
|
---|
| 650 | NRODataRecord *record = getRecord( i ) ;
|
---|
| 651 | string arryt = string( record->ARRYT ) ;
|
---|
| 652 | //string sbeamno = arryt.substr( 1, arryt.size()-1 ) ;
|
---|
| 653 | //uInt ib = atoi( sbeamno.c_str() ) - 1 ;
|
---|
| 654 | uInt ib = getArrayId( arryt ) ;
|
---|
| 655 |
|
---|
| 656 | int ia = -1 ;
|
---|
| 657 | bool isAOS = false ;
|
---|
| 658 | //cout << "NRODataset::getFrequencies() record->ARRYT=" << record->ARRYT << endl ;
|
---|
| 659 | //cout << "NRODataset::getFrequencies() ib = " << ib << endl ;
|
---|
| 660 |
|
---|
| 661 | if ( strncmp( record->ARRYT, "X", 1 ) == 0 ) {
|
---|
| 662 | // FX
|
---|
| 663 | if ( strncmp( (record->ARRYT)+1, "1", 1 ) == 0
|
---|
| 664 | || strncmp( (record->ARRYT)+1, "3", 1 ) ) {
|
---|
| 665 | // FX1, 3
|
---|
| 666 | ia = 2 ;
|
---|
| 667 | }
|
---|
| 668 | else {
|
---|
| 669 | // FX2, 4
|
---|
| 670 | ia = 1 ;
|
---|
| 671 | }
|
---|
| 672 | }
|
---|
| 673 | else if ( strncmp( record->ARRYT, "A", 1 ) == 0 )
|
---|
| 674 | ia = 2 ; // AC
|
---|
| 675 | else if ( strncmp( record->ARRYT, "W", 1 ) == 0 ) {
|
---|
| 676 | // AOS-W
|
---|
| 677 | ia = 2 ;
|
---|
| 678 | isAOS = true ;
|
---|
| 679 | }
|
---|
| 680 | else if ( strncmp( record->ARRYT, "U", 1 ) == 0 ) {
|
---|
| 681 | // AOS-U
|
---|
| 682 | ia = 2 ;
|
---|
| 683 | isAOS = true ;
|
---|
| 684 | }
|
---|
| 685 | else if ( strncmp( record->ARRYT, "H", 1 ) == 0 ) {
|
---|
| 686 | // AOS-H
|
---|
| 687 | isAOS = true ;
|
---|
| 688 | //cout << record->ARRYT << " " << strlen(record->ARRYT) << endl ;
|
---|
| 689 | //cout << (record->ARRYT)+1 << endl ;
|
---|
| 690 | if ( strncmp( (record->ARRYT)+2, " ", 1 ) == 0 ) {
|
---|
| 691 | // H1-9
|
---|
| 692 | if ( strncmp( (record->ARRYT)+1, "9", 1 ) == 0 ) {
|
---|
| 693 | // H9
|
---|
| 694 | ia = 2 ;
|
---|
| 695 | }
|
---|
| 696 | else {
|
---|
| 697 | // H1-8
|
---|
| 698 | ia = 1 ;
|
---|
| 699 | }
|
---|
| 700 | }
|
---|
| 701 | else {
|
---|
| 702 | // H10-16
|
---|
| 703 | ia = 2 ;
|
---|
| 704 | }
|
---|
| 705 | }
|
---|
| 706 |
|
---|
| 707 | int iu ;
|
---|
| 708 | if ( record->FQIF1 > 0 )
|
---|
| 709 | iu = 1 ; // USB
|
---|
| 710 | else
|
---|
| 711 | iu = 2 ; // LSB
|
---|
| 712 |
|
---|
| 713 | int ivdef = -1 ;
|
---|
| 714 | //if ( strncmp( (dataset_->getVDEF()).c_str(), "RAD", 3 ) == 0 )
|
---|
| 715 | if ( (getVDEF()).compare( 0, 3, "RAD" ) == 0 )
|
---|
| 716 | ivdef = 0 ;
|
---|
| 717 | //else if ( strncmp( dataset_->getVDEF(), "OPT", 3 ) == 0 )
|
---|
| 718 | else if ( (getVDEF()).compare( 0, 3, "OPT" ) == 0 )
|
---|
| 719 | ivdef = 1 ;
|
---|
| 720 | // DEBUG
|
---|
| 721 | //cout << "NRODataset::getFrequencies() ivdef = " << ivdef << endl ;
|
---|
| 722 | //
|
---|
| 723 | double vel = getURVEL() + record->VRAD ;
|
---|
| 724 | double cvel = 2.99792458e8 ; // speed of light [m/s]
|
---|
| 725 | double fq0 = record->FREQ0 ;
|
---|
| 726 | //double fq0 = record->FQTRK ;
|
---|
| 727 |
|
---|
| 728 | int ncal = getNFCAL()[ib] ;
|
---|
| 729 | vector<double> freqs( ncal ) ;
|
---|
| 730 | double cw = 0.0 ;
|
---|
| 731 | vector<double> fqcal = getFQCAL()[ib] ;
|
---|
| 732 | vector<double> chcal = getCHCAL()[ib] ;
|
---|
| 733 |
|
---|
| 734 | for ( int ii = 0 ; ii < ncal ; ii++ ) {
|
---|
| 735 | freqs[ii] = fqcal[ii] ;
|
---|
| 736 | freqs[ii] -= getF0CAL()[ib] ;
|
---|
| 737 | if ( ia == 1 ) {
|
---|
| 738 | if ( iu == 1 ) {
|
---|
| 739 | freqs[ii] = fq0 + freqs[ii] ;
|
---|
| 740 | }
|
---|
| 741 | else if ( iu == 2 ) {
|
---|
| 742 | freqs[ii] = fq0 - freqs[ii] ;
|
---|
| 743 | }
|
---|
| 744 | }
|
---|
| 745 | else if ( ia == 2 ) {
|
---|
| 746 | if ( iu == 1 ) {
|
---|
| 747 | freqs[ii] = fq0 - freqs[ii] ;
|
---|
| 748 | }
|
---|
| 749 | else if ( iu == 2 ) {
|
---|
| 750 | freqs[ii] = fq0 + freqs[ii] ;
|
---|
| 751 | }
|
---|
| 752 | }
|
---|
| 753 | // if ( ivdef == 0 ) {
|
---|
| 754 | // double factor = 1.0 / ( 1.0 - vel / cvel ) ;
|
---|
| 755 | // freqs[ii] = freqs[ii] * factor - record->FQTRK * ( factor - 1.0 ) ;
|
---|
| 756 | // }
|
---|
| 757 | // else if ( ivdef == 1 ) {
|
---|
| 758 | // double factor = vel / cvel ;
|
---|
| 759 | // freqs[ii] = freqs[ii] * ( 1.0 + factor ) - record->FQTRK * factor ;
|
---|
| 760 | // }
|
---|
| 761 | }
|
---|
| 762 |
|
---|
| 763 | if ( isAOS ) {
|
---|
| 764 | // regridding
|
---|
| 765 | while ( ncal < (int)chcal.size() ) {
|
---|
| 766 | chcal.pop_back() ;
|
---|
| 767 | }
|
---|
| 768 | Vector<Double> xin( chcal ) ;
|
---|
| 769 | Vector<Double> yin( freqs ) ;
|
---|
| 770 | int nchan = getNUMCH() ;
|
---|
| 771 | Vector<Double> xout( nchan ) ;
|
---|
| 772 | indgen( xout ) ;
|
---|
| 773 | Vector<Double> yout ;
|
---|
| 774 | InterpolateArray1D<Double, Double>::interpolate( yout, xout, xin, yin, InterpolateArray1D<Double,Double>::cubic ) ;
|
---|
| 775 | Double bw = abs( yout[nchan-1] - yout[0] ) ;
|
---|
| 776 | bw += 0.5 * abs( yout[nchan-1] - yout[nchan-2] + yout[1] - yout[0] ) ;
|
---|
| 777 | Double dz = bw / (Double) nchan ;
|
---|
| 778 | if ( yout[0] > yout[1] )
|
---|
| 779 | dz = - dz ;
|
---|
| 780 | v[0] = 0 ;
|
---|
| 781 | v[1] = yout[0] ;
|
---|
| 782 | v[2] = dz ;
|
---|
| 783 | }
|
---|
| 784 | else {
|
---|
| 785 | cw = getBERES()[ib] ;
|
---|
| 786 |
|
---|
| 787 | if ( cw == 0.0 ) {
|
---|
| 788 | cw = ( freqs[1] - freqs[0] )
|
---|
| 789 | / ( chcal[1] - chcal[0] ) ;
|
---|
| 790 | // if ( cw < 0.0 )
|
---|
| 791 | // cw = - cw ;
|
---|
| 792 | }
|
---|
| 793 | v[0] = chcal[0] - 1 ; // 0-base
|
---|
| 794 | v[1] = freqs[0] ;
|
---|
| 795 | v[2] = cw ;
|
---|
| 796 | }
|
---|
| 797 |
|
---|
| 798 | return v ;
|
---|
| 799 | }
|
---|
| 800 |
|
---|
| 801 | uInt NRODataset::getArrayId( string type )
|
---|
| 802 | {
|
---|
| 803 | string sbeamno = type.substr( 1, type.size()-1 ) ;
|
---|
| 804 | uInt ib = atoi( sbeamno.c_str() ) - 1 ;
|
---|
| 805 | return ib ;
|
---|
| 806 | }
|
---|
| 807 |
|
---|
| 808 | void NRODataset::show()
|
---|
| 809 | {
|
---|
| 810 | LogIO os( LogOrigin( "NRODataset", "show()", WHERE ) ) ;
|
---|
| 811 |
|
---|
| 812 | os << LogIO::NORMAL << "------------------------------------------------------------" << endl ;
|
---|
| 813 | os << LogIO::NORMAL << "Number of scan = " << scanNum_ << endl ;
|
---|
| 814 | os << LogIO::NORMAL << "Number of data record = " << rowNum_ << endl ;
|
---|
| 815 | os << LogIO::NORMAL << "Length of data record = " << scanLen_ << " bytes" << endl ;
|
---|
| 816 | os << LogIO::NORMAL << "Allocated memory for spectral data = " << dataLen_ << " bytes" << endl ;
|
---|
| 817 | os << LogIO::NORMAL << "Max number of channel = " << chmax_ << endl ;
|
---|
| 818 | os << LogIO::NORMAL << "------------------------------------------------------------" << endl ;
|
---|
| 819 | os.post() ;
|
---|
| 820 |
|
---|
| 821 | }
|
---|