| 1 | //#---------------------------------------------------------------------------
|
|---|
| 2 | //# SDMathWrapper.cc: Wrapper classes to use CountedPtr
|
|---|
| 3 | //#---------------------------------------------------------------------------
|
|---|
| 4 | //# Copyright (C) 2004
|
|---|
| 5 | //# ATNF
|
|---|
| 6 | //#
|
|---|
| 7 | //# This program is free software; you can redistribute it and/or modify it
|
|---|
| 8 | //# under the terms of the GNU General Public License as published by the Free
|
|---|
| 9 | //# Software Foundation; either version 2 of the License, or (at your option)
|
|---|
| 10 | //# any later version.
|
|---|
| 11 | //#
|
|---|
| 12 | //# This program is distributed in the hope that it will be useful, but
|
|---|
| 13 | //# WITHOUT ANY WARRANTY; without even the implied warranty of
|
|---|
| 14 | //# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
|
|---|
| 15 | //# Public License for more details.
|
|---|
| 16 | //#
|
|---|
| 17 | //# You should have received a copy of the GNU General Public License along
|
|---|
| 18 | //# with this program; if not, write to the Free Software Foundation, Inc.,
|
|---|
| 19 | //# 675 Massachusetts Ave, Cambridge, MA 02139, USA.
|
|---|
| 20 | //#
|
|---|
| 21 | //# Correspondence concerning this software should be addressed as follows:
|
|---|
| 22 | //# Internet email: Malte.Marquarding@csiro.au
|
|---|
| 23 | //# Postal address: Malte Marquarding,
|
|---|
| 24 | //# Australia Telescope National Facility,
|
|---|
| 25 | //# P.O. Box 76,
|
|---|
| 26 | //# Epping, NSW, 2121,
|
|---|
| 27 | //# AUSTRALIA
|
|---|
| 28 | //#
|
|---|
| 29 | //# $Id:
|
|---|
| 30 | //#---------------------------------------------------------------------------
|
|---|
| 31 |
|
|---|
| 32 |
|
|---|
| 33 | #include "SDMathWrapper.h"
|
|---|
| 34 | #include "SDMath.h"
|
|---|
| 35 |
|
|---|
| 36 |
|
|---|
| 37 | using namespace asap;
|
|---|
| 38 | using namespace casa;
|
|---|
| 39 |
|
|---|
| 40 | SDMemTableWrapper SDMathWrapper::quotient(const SDMemTableWrapper& on,
|
|---|
| 41 | const SDMemTableWrapper& off,
|
|---|
| 42 | Bool preserveContinuum)
|
|---|
| 43 | {
|
|---|
| 44 | SDMath sdm;
|
|---|
| 45 | Bool doTSys = True;
|
|---|
| 46 | return SDMemTableWrapper(sdm.binaryOperate(on.getCP(), off.getCP(),
|
|---|
| 47 | String("QUOTIENT"), preserveContinuum, doTSys));
|
|---|
| 48 | }
|
|---|
| 49 |
|
|---|
| 50 |
|
|---|
| 51 | SDMemTableWrapper SDMathWrapper::binaryOperate(const SDMemTableWrapper& left,
|
|---|
| 52 | const SDMemTableWrapper& right,
|
|---|
| 53 | const std::string& op, bool doTSys)
|
|---|
| 54 | {
|
|---|
| 55 | SDMath sdm;
|
|---|
| 56 | return SDMemTableWrapper(sdm.binaryOperate(left.getCP(), right.getCP(),
|
|---|
| 57 | String(op), False, Bool(doTSys)));
|
|---|
| 58 | }
|
|---|
| 59 |
|
|---|
| 60 |
|
|---|
| 61 | void SDMathWrapper::scaleInSitu(SDMemTableWrapper& in, float factor, bool doAll, bool doTSys)
|
|---|
| 62 | {
|
|---|
| 63 | SDMemTable* pIn = in.getPtr();
|
|---|
| 64 | const uInt what = 0;
|
|---|
| 65 | //
|
|---|
| 66 | SDMath sdm;
|
|---|
| 67 | SDMemTable* pOut = sdm.unaryOperate (*pIn, Float(factor),
|
|---|
| 68 | Bool(doAll), what, Bool(doTSys));
|
|---|
| 69 | *pIn = *pOut;
|
|---|
| 70 | delete pOut;
|
|---|
| 71 | }
|
|---|
| 72 |
|
|---|
| 73 | SDMemTableWrapper SDMathWrapper::scale(const SDMemTableWrapper& in,
|
|---|
| 74 | float factor, bool doAll, bool doTSys)
|
|---|
| 75 | {
|
|---|
| 76 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 77 | const uInt what = 0;
|
|---|
| 78 | SDMath sdm;
|
|---|
| 79 | return CountedPtr<SDMemTable>(sdm.unaryOperate(*pIn, Float(factor), Bool(doAll),
|
|---|
| 80 | what, Bool (doTSys)));
|
|---|
| 81 | }
|
|---|
| 82 |
|
|---|
| 83 |
|
|---|
| 84 | void SDMathWrapper::addInSitu(SDMemTableWrapper& in, float offset, bool doAll)
|
|---|
| 85 | {
|
|---|
| 86 | SDMemTable* pIn = in.getPtr();
|
|---|
| 87 | const uInt what = 1;
|
|---|
| 88 | //
|
|---|
| 89 | SDMath sdm;
|
|---|
| 90 | Bool doTSys = False;
|
|---|
| 91 | SDMemTable* pOut = sdm.unaryOperate (*pIn, Float(offset),
|
|---|
| 92 | Bool(doAll), what, doTSys);
|
|---|
| 93 | *pIn = *pOut;
|
|---|
| 94 | delete pOut;
|
|---|
| 95 | }
|
|---|
| 96 |
|
|---|
| 97 | SDMemTableWrapper SDMathWrapper::add(const SDMemTableWrapper& in,
|
|---|
| 98 | float offset, bool doAll)
|
|---|
| 99 | {
|
|---|
| 100 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 101 | const uInt what = 1;
|
|---|
| 102 | SDMath sdm;
|
|---|
| 103 | Bool doTSys = False;
|
|---|
| 104 | return CountedPtr<SDMemTable>(sdm.unaryOperate(*pIn, Float(offset),
|
|---|
| 105 | Bool(doAll), what, doTSys));
|
|---|
| 106 | }
|
|---|
| 107 |
|
|---|
| 108 |
|
|---|
| 109 | void SDMathWrapper::smoothInSitu(SDMemTableWrapper& in,
|
|---|
| 110 | const std::string& kernel, float width,
|
|---|
| 111 | bool doAll)
|
|---|
| 112 | {
|
|---|
| 113 | SDMemTable* pIn = in.getPtr();
|
|---|
| 114 | SDMath sdm;
|
|---|
| 115 | SDMemTable* pOut = sdm.smooth(*pIn, String(kernel),
|
|---|
| 116 | Float(width), Bool(doAll));
|
|---|
| 117 | *pIn = *pOut;
|
|---|
| 118 | delete pOut;
|
|---|
| 119 | }
|
|---|
| 120 |
|
|---|
| 121 |
|
|---|
| 122 | SDMemTableWrapper SDMathWrapper::smooth (const SDMemTableWrapper& in,
|
|---|
| 123 | const std::string& kernel,
|
|---|
| 124 | float width, bool doAll)
|
|---|
| 125 | {
|
|---|
| 126 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 127 | SDMath sdm;
|
|---|
| 128 | return CountedPtr<SDMemTable>(sdm.smooth(*pIn, String(kernel),
|
|---|
| 129 | Float(width), Bool(doAll)));
|
|---|
| 130 | }
|
|---|
| 131 |
|
|---|
| 132 |
|
|---|
| 133 |
|
|---|
| 134 | void SDMathWrapper::binInSitu(SDMemTableWrapper& in, int width)
|
|---|
| 135 | {
|
|---|
| 136 | SDMemTable* pIn = in.getPtr();
|
|---|
| 137 | SDMath sdm;
|
|---|
| 138 | SDMemTable* pOut = sdm.bin (*pIn, Int(width));
|
|---|
| 139 | *pIn = *pOut;
|
|---|
| 140 | delete pOut;
|
|---|
| 141 | }
|
|---|
| 142 |
|
|---|
| 143 | SDMemTableWrapper SDMathWrapper::bin (const SDMemTableWrapper& in,
|
|---|
| 144 | int width)
|
|---|
| 145 | {
|
|---|
| 146 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 147 | SDMath sdm;
|
|---|
| 148 | return CountedPtr<SDMemTable>(sdm.bin(*pIn, Int(width)));
|
|---|
| 149 | }
|
|---|
| 150 |
|
|---|
| 151 | void SDMathWrapper::resampleInSitu(SDMemTableWrapper& in, const std::string& method,
|
|---|
| 152 | float width)
|
|---|
| 153 | {
|
|---|
| 154 | SDMemTable* pIn = in.getPtr();
|
|---|
| 155 | SDMath sdm;
|
|---|
| 156 | SDMemTable* pOut = sdm.resample(*pIn, String(method), Float(width));
|
|---|
| 157 | *pIn = *pOut;
|
|---|
| 158 | delete pOut;
|
|---|
| 159 | }
|
|---|
| 160 |
|
|---|
| 161 | SDMemTableWrapper SDMathWrapper::resample (const SDMemTableWrapper& in,
|
|---|
| 162 | const std::string& method, float width)
|
|---|
| 163 | {
|
|---|
| 164 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 165 | SDMath sdm;
|
|---|
| 166 | return CountedPtr<SDMemTable>(sdm.resample(*pIn, String(method), Float(width)));
|
|---|
| 167 | }
|
|---|
| 168 |
|
|---|
| 169 |
|
|---|
| 170 | void SDMathWrapper::averagePolInSitu(SDMemTableWrapper& in,
|
|---|
| 171 | const std::vector<bool>& mask,
|
|---|
| 172 | const std::string& weightStr)
|
|---|
| 173 | {
|
|---|
| 174 | SDMemTable* pIn = in.getPtr();
|
|---|
| 175 | SDMath sdm;
|
|---|
| 176 | Vector<Bool> tMask(mask);
|
|---|
| 177 | SDMemTable* pOut = sdm.averagePol (*pIn, tMask, String(weightStr));
|
|---|
| 178 | *pIn = *pOut;
|
|---|
| 179 | delete pOut;
|
|---|
| 180 | }
|
|---|
| 181 |
|
|---|
| 182 | SDMemTableWrapper SDMathWrapper::averagePol (const SDMemTableWrapper& in,
|
|---|
| 183 | const std::vector<bool>& mask,
|
|---|
| 184 | const std::string& weightStr)
|
|---|
| 185 | {
|
|---|
| 186 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 187 | SDMath sdm;
|
|---|
| 188 | Vector<Bool> tMask(mask);
|
|---|
| 189 | return CountedPtr<SDMemTable>(sdm.averagePol(*pIn, tMask, String(weightStr)));
|
|---|
| 190 | }
|
|---|
| 191 |
|
|---|
| 192 |
|
|---|
| 193 | std::vector<float> SDMathWrapper::statistic(const SDMemTableWrapper& in,
|
|---|
| 194 | const std::vector<bool>& mask,
|
|---|
| 195 | const std::string& which, int row)
|
|---|
| 196 | {
|
|---|
| 197 | SDMath sdm;
|
|---|
| 198 | Vector<Bool> tMask(mask);
|
|---|
| 199 | return sdm.statistic(in.getCP(), tMask, String(which), Int(row));
|
|---|
| 200 | }
|
|---|
| 201 |
|
|---|
| 202 |
|
|---|
| 203 | void SDMathWrapper::convertFluxInSitu(SDMemTableWrapper& in, float D,
|
|---|
| 204 | float eta, float JyPerK, bool doAll)
|
|---|
| 205 | {
|
|---|
| 206 | SDMemTable* pIn = in.getPtr();
|
|---|
| 207 | SDMath sdm;
|
|---|
| 208 | SDMemTable* pOut = sdm.convertFlux (*pIn, Float(D), Float(eta), Float(JyPerK), Bool(doAll));
|
|---|
| 209 | *pIn = *pOut;
|
|---|
| 210 | delete pOut;
|
|---|
| 211 | }
|
|---|
| 212 |
|
|---|
| 213 |
|
|---|
| 214 | SDMemTableWrapper SDMathWrapper::convertFlux(const SDMemTableWrapper& in, float D, float eta,
|
|---|
| 215 | float JyPerK, bool doAll)
|
|---|
| 216 | {
|
|---|
| 217 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 218 | SDMath sdm;
|
|---|
| 219 | return CountedPtr<SDMemTable>(sdm.convertFlux(*pIn, Float(D), Float(eta), Float(JyPerK), Bool(doAll)));
|
|---|
| 220 | }
|
|---|
| 221 |
|
|---|
| 222 |
|
|---|
| 223 | void SDMathWrapper::gainElevationInSitu(SDMemTableWrapper& in,
|
|---|
| 224 | const std::vector<float>& coeffs,
|
|---|
| 225 | const string& fileName,
|
|---|
| 226 | const string& method, bool doAll)
|
|---|
| 227 | {
|
|---|
| 228 | SDMemTable* pIn = in.getPtr();
|
|---|
| 229 | Vector<Float> tCoeffs(coeffs);
|
|---|
| 230 | SDMath sdm;
|
|---|
| 231 | SDMemTable* pOut = sdm.gainElevation(*pIn, tCoeffs, String(fileName),
|
|---|
| 232 | String(method), Bool(doAll));
|
|---|
| 233 | *pIn = *pOut;
|
|---|
| 234 | delete pOut;
|
|---|
| 235 | }
|
|---|
| 236 |
|
|---|
| 237 |
|
|---|
| 238 | SDMemTableWrapper SDMathWrapper::gainElevation(const SDMemTableWrapper& in,
|
|---|
| 239 | const std::vector<float>& coeffs,
|
|---|
| 240 | const string& fileName,
|
|---|
| 241 | const string& method, bool doAll)
|
|---|
| 242 | {
|
|---|
| 243 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 244 | Vector<Float> tCoeffs(coeffs);
|
|---|
| 245 | SDMath sdm;
|
|---|
| 246 | return CountedPtr<SDMemTable>(sdm.gainElevation(*pIn, tCoeffs, String(fileName),
|
|---|
| 247 | String(method), Bool(doAll)));
|
|---|
| 248 | }
|
|---|
| 249 |
|
|---|
| 250 | void SDMathWrapper::frequencyAlignmentInSitu (SDMemTableWrapper& in, const std::string& refTime,
|
|---|
| 251 | const std::string& method, bool perFreqID)
|
|---|
| 252 | {
|
|---|
| 253 | SDMemTable* pIn = in.getPtr();
|
|---|
| 254 | SDMath sdm;
|
|---|
| 255 | SDMemTable* pOut = sdm.frequencyAlignment(*pIn, String(refTime), String(method),
|
|---|
| 256 | Bool(perFreqID));
|
|---|
| 257 | *pIn = *pOut;
|
|---|
| 258 | delete pOut;
|
|---|
| 259 | }
|
|---|
| 260 |
|
|---|
| 261 |
|
|---|
| 262 | SDMemTableWrapper SDMathWrapper::frequencyAlignment (const SDMemTableWrapper& in,
|
|---|
| 263 | const std::string& refTime,
|
|---|
| 264 | const std::string& method,
|
|---|
| 265 | bool perFreqID)
|
|---|
| 266 | {
|
|---|
| 267 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 268 | SDMath sdm;
|
|---|
| 269 | return CountedPtr<SDMemTable>(sdm.frequencyAlignment(*pIn, String(refTime),
|
|---|
| 270 | String(method), Bool(perFreqID)));
|
|---|
| 271 | }
|
|---|
| 272 |
|
|---|
| 273 | void SDMathWrapper::rotateXYPhaseInSitu(SDMemTableWrapper& in, float angle, bool doAll)
|
|---|
| 274 | {
|
|---|
| 275 | SDMemTable* pIn = in.getPtr();
|
|---|
| 276 | SDMath sdm;
|
|---|
| 277 | sdm.rotateXYPhase(*pIn, Float(angle), Bool(doAll));
|
|---|
| 278 | }
|
|---|
| 279 |
|
|---|
| 280 |
|
|---|
| 281 | void SDMathWrapper::rotateLinPolPhaseInSitu(SDMemTableWrapper& in, float angle, bool doAll)
|
|---|
| 282 | {
|
|---|
| 283 | SDMemTable* pIn = in.getPtr();
|
|---|
| 284 | SDMath sdm;
|
|---|
| 285 | sdm.rotateLinPolPhase(*pIn, Float(angle), Bool(doAll));
|
|---|
| 286 | }
|
|---|
| 287 |
|
|---|
| 288 |
|
|---|
| 289 |
|
|---|
| 290 |
|
|---|
| 291 | void SDMathWrapper::opacityInSitu(SDMemTableWrapper& in, float tau, bool doAll)
|
|---|
| 292 | {
|
|---|
| 293 | SDMemTable* pIn = in.getPtr();
|
|---|
| 294 | SDMath sdm;
|
|---|
| 295 | SDMemTable* pOut = sdm.opacity(*pIn, Float(tau), Bool(doAll));
|
|---|
| 296 | *pIn = *pOut;
|
|---|
| 297 | delete pOut;
|
|---|
| 298 | }
|
|---|
| 299 |
|
|---|
| 300 |
|
|---|
| 301 | SDMemTableWrapper SDMathWrapper::opacity(const SDMemTableWrapper& in,
|
|---|
| 302 | float tau, bool doAll)
|
|---|
| 303 | {
|
|---|
| 304 | const CountedPtr<SDMemTable>& pIn = in.getCP();
|
|---|
| 305 | SDMath sdm;
|
|---|
| 306 | return CountedPtr<SDMemTable>(sdm.opacity(*pIn, Float(tau), Bool(doAll)));
|
|---|
| 307 | }
|
|---|
| 308 |
|
|---|