source: tags/release-1.2.2/Makefile.in

Last change on this file was 1113, checked in by MatthewWhiting, 12 years ago

Reordering the CINC statements in the Makefile - if a previous version of Duchamp has been installed in a system directory not covered by the wcslib/cfitsio/pgplot directories, the previous arrangement could cause conflicts.
File size: 5.9 KB
Line 
1CFLAGS = -O2 -ftree-vectorize
2
3FFLAGS = -fast -O4
4
5CC =    @CC@ $(CFLAGS)
6CXX =   @CXX@ $(CFLAGS)
7F77=    @F77@ $(FFLAGS)
8LINK=   @LINKER@
9
10BASE = ./src
11
12INSTALLDIR = @prefix@/bin
13LIBDIR = @prefix@/lib
14INCDIR = @prefix@/include/duchamp
15
16V = @PACKAGE_VERSION@
17EXEC = Duchamp-$(V)
18EXEC-STUB = Duchamp
19
20AR = ar cq
21LIB = libduchamp.a
22RANLIB = ranlib
23
24INSTALL = @INSTALL@
25LN_S = @LN_S@
26
27PGPLOTINC = @PGPLOTINC@
28PGPLOTLIB = @PGPLOTLIB@
29
30CFITSIOINC = @CFITSIOINC@
31CFITSIOLIB = @CFITSIOLIB@
32
33WCSINC = @WCSINC@
34WCSLIB = @WCSLIB@
35
36CINC = -I$(BASE) $(PGPLOTINC) $(WCSINC) $(CFITSIOINC)
37
38LIBS = $(WCSLIB) $(CFITSIOLIB) $(PGPLOTLIB)
39
40ATROUSDIR = $(BASE)/ATrous
41PIXELMAPDIR = $(BASE)/PixelMap
42DETECTIONDIR = $(BASE)/Detection
43CUBESDIR = $(BASE)/Cubes
44FITSIODIR = $(BASE)/FitsIO
45UTILDIR = $(BASE)/Utils
46OUTPUTSDIR = $(BASE)/Outputs
47TESTDIR = ./verification
48
49HEADS = $(BASE)/duchamp.hh\
50        $(BASE)/pgheader.hh\
51        $(BASE)/param.hh\
52        $(BASE)/fitsHeader.hh\
53        $(PIXELMAPDIR)/Voxel.hh\
54        $(PIXELMAPDIR)/Scan.hh\
55        $(PIXELMAPDIR)/Object2D.hh\
56        $(PIXELMAPDIR)/Object3D.hh\
57        $(ATROUSDIR)/atrous.hh\
58        $(ATROUSDIR)/filter.hh\
59        $(DETECTIONDIR)/detection.hh\
60        $(DETECTIONDIR)/finders.hh\
61        $(DETECTIONDIR)/ObjectGrower.hh\
62        $(CUBESDIR)/cubes.hh\
63        $(CUBESDIR)/plots.hh\
64        $(CUBESDIR)/ReadExisting.hh\
65        $(CUBESDIR)/ReadExistingRecon.hh\
66        $(CUBESDIR)/ReadExistingSmooth.hh\
67        $(FITSIODIR)/Beam.hh\
68        $(FITSIODIR)/DuchampBeam.hh\
69        $(UTILDIR)/Hanning.hh\
70        $(UTILDIR)/GaussSmooth1D.hh\
71        $(UTILDIR)/GaussSmooth2D.hh\
72        $(UTILDIR)/Section.hh\
73        $(UTILDIR)/Statistics.hh\
74        $(UTILDIR)/utils.hh\
75        $(UTILDIR)/feedback.hh\
76        $(UTILDIR)/mycpgplot.hh\
77        $(UTILDIR)/VOField.hh\
78        $(UTILDIR)/VOParam.hh\
79        $(OUTPUTSDIR)/columns.hh\
80        $(OUTPUTSDIR)/CatalogueSpecification.hh\
81        $(OUTPUTSDIR)/CatalogueWriter.hh\
82        $(OUTPUTSDIR)/FileCatalogueWriter.hh\
83        $(OUTPUTSDIR)/ASCIICatalogueWriter.hh\
84        $(OUTPUTSDIR)/VOTableCatalogueWriter.hh\
85        $(OUTPUTSDIR)/AnnotationWriter.hh\
86        $(OUTPUTSDIR)/KarmaAnnotationWriter.hh\
87        $(OUTPUTSDIR)/DS9AnnotationWriter.hh
88
89OBJECTS-NOPG = $(BASE)/mainDuchamp.o \
90        $(BASE)/duchamp.o\
91        $(BASE)/param.o\
92        $(BASE)/fitsHeader.o\
93        $(PIXELMAPDIR)/Voxel.o\
94        $(PIXELMAPDIR)/Scan.o\
95        $(PIXELMAPDIR)/Object2D.o\
96        $(PIXELMAPDIR)/Object3D.o\
97        $(ATROUSDIR)/filter.o\
98        $(ATROUSDIR)/atrous_1d_reconstruct.o\
99        $(ATROUSDIR)/atrous_2d_reconstruct.o\
100        $(ATROUSDIR)/atrous_3d_reconstruct.o\
101        $(ATROUSDIR)/baselineSubtract.o\
102        $(ATROUSDIR)/ReconSearch.o\
103        $(DETECTIONDIR)/detection.o\
104        $(DETECTIONDIR)/ObjectGrower.o\
105        $(DETECTIONDIR)/areClose.o\
106        $(DETECTIONDIR)/lutz_detect.o\
107        $(DETECTIONDIR)/mergeIntoList.o\
108        $(DETECTIONDIR)/outputDetection.o\
109        $(DETECTIONDIR)/sorting.o\
110        $(DETECTIONDIR)/spectrumDetect.o\
111        $(CUBESDIR)/cubes.o\
112        $(CUBESDIR)/cubes_extended.o\
113        $(CUBESDIR)/baseline.o\
114        $(CUBESDIR)/CubicSearch.o\
115        $(CUBESDIR)/detectionIO.o\
116        $(CUBESDIR)/existingDetections.o\
117        $(CUBESDIR)/getImage.o\
118        $(CUBESDIR)/invertCube.o\
119        $(CUBESDIR)/Merger.o\
120        $(CUBESDIR)/momentMap.o\
121        $(CUBESDIR)/saveImage.o\
122        $(CUBESDIR)/smoothCube.o\
123        $(CUBESDIR)/spectraUtils.o\
124        $(CUBESDIR)/trimImage.o\
125        $(CUBESDIR)/ReadExisting.o\
126        $(CUBESDIR)/ReadExistingRecon.o\
127        $(CUBESDIR)/ReadExistingSmooth.o\
128        $(FITSIODIR)/Beam.o\
129        $(FITSIODIR)/DuchampBeam.o\
130        $(FITSIODIR)/dataIO.o\
131        $(FITSIODIR)/headerIO.o\
132        $(FITSIODIR)/subsection.o\
133        $(FITSIODIR)/wcsIO.o\
134        $(UTILDIR)/Section.o\
135        $(UTILDIR)/Statistics.o\
136        $(UTILDIR)/feedback.o\
137        $(UTILDIR)/GaussSmooth1D.o\
138        $(UTILDIR)/Hanning.o\
139        $(UTILDIR)/VOField.o\
140        $(UTILDIR)/VOParam.o\
141        $(UTILDIR)/getStats.o\
142        $(UTILDIR)/getNormalStats.o\
143        $(UTILDIR)/getRobustStats.o\
144        $(UTILDIR)/linear_regression.o\
145        $(UTILDIR)/position_related.o\
146        $(UTILDIR)/sort.o\
147        $(UTILDIR)/string_related.o\
148        $(UTILDIR)/wcsFunctions.o\
149        $(UTILDIR)/zscale.o\
150        $(OUTPUTSDIR)/columns.o\
151        $(OUTPUTSDIR)/CatalogueSpecification.o\
152        $(OUTPUTSDIR)/CatalogueWriter.o\
153        $(OUTPUTSDIR)/FileCatalogueWriter.o\
154        $(OUTPUTSDIR)/ASCIICatalogueWriter.o\
155        $(OUTPUTSDIR)/VOTableCatalogueWriter.o\
156        $(OUTPUTSDIR)/AnnotationWriter.o\
157        $(OUTPUTSDIR)/KarmaAnnotationWriter.o\
158        $(OUTPUTSDIR)/DS9AnnotationWriter.o
159
160ifeq ($(strip $(PGPLOTLIB)),)
161  OBJECTS = $(OBJECTS-NOPG)
162else
163  OBJECTS = $(OBJECTS-NOPG)\
164        $(CUBESDIR)/drawBlankEdges.o\
165        $(CUBESDIR)/drawMomentCutout.o\
166        $(CUBESDIR)/outputSpectra.o\
167        $(CUBESDIR)/plotting.o\
168        $(UTILDIR)/mycpgplot.o\
169        $(CUBESDIR)/plots.o\
170        $(UTILDIR)/pgplot_related.o
171endif
172
173duchamp : $(OBJECTS)
174        $(LINK) -o $(EXEC) $(OBJECTS) $(LIBS)
175
176lib     : $(OBJECTS)
177        $(AR) $(LIB) $(OBJECTS)
178        $(RANLIB) $(LIB)
179
180createTestImage : $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o
181        $(CXX) -o createTestImage.x\
182        $(TESTDIR)/createTestImage.o $(UTILDIR)/get_random_spectrum.o\
183        $(CFITSIOLIB) @LIBS@
184
185install :
186        $(INSTALL) -d -m 2755 $(INSTALLDIR)
187        $(INSTALL) -m 755 $(EXEC) $(INSTALLDIR)
188        $(RM) $(INSTALLDIR)/$(EXEC-STUB)
189        cd $(INSTALLDIR) && $(LN_S) $(EXEC) $(EXEC-STUB)
190        -test ! -f $(LIB) || $(INSTALL) -d -m 2755 $(LIBDIR)
191        -test ! -f $(LIB) || $(INSTALL) -m 644 $(LIB) $(LIBDIR)
192        $(INSTALL) -d -m 2755 $(INCDIR)
193        $(INSTALL) -m 644 $(BASE)/*.hh $(INCDIR)
194        $(INSTALL) -m 644 $(BASE)/*.h $(INCDIR)
195        $(INSTALL) -d -m 2755 $(INCDIR)/Cubes
196        $(INSTALL) -m 644 $(CUBESDIR)/*.hh $(INCDIR)/Cubes
197        $(INSTALL) -d -m 2755 $(INCDIR)/ATrous
198        $(INSTALL) -m 644 $(ATROUSDIR)/*.hh $(INCDIR)/ATrous
199        $(INSTALL) -d -m 2755 $(INCDIR)/Detection
200        $(INSTALL) -m 644 $(DETECTIONDIR)/*.hh $(INCDIR)/Detection
201        $(INSTALL) -d -m 2755 $(INCDIR)/FitsIO
202        $(INSTALL) -m 644 $(FITSIODIR)/*.hh $(INCDIR)/FitsIO
203        $(INSTALL) -d -m 2755 $(INCDIR)/PixelMap
204        $(INSTALL) -m 644 $(PIXELMAPDIR)/*.hh $(INCDIR)/PixelMap
205        $(INSTALL) -d -m 2755 $(INCDIR)/Outputs
206        $(INSTALL) -m 644 $(OUTPUTSDIR)/*.hh $(INCDIR)/Outputs
207        $(INSTALL) -d -m 2755 $(INCDIR)/Utils
208        $(INSTALL) -m 644 $(UTILDIR)/*.hh $(INCDIR)/Utils
209        $(INSTALL) -m 644 $(UTILDIR)/*.tcc $(INCDIR)/Utils
210
211$(OBJECTS) : $(HEADS)
212
213.cc.o:
214        $(CXX) -c $< $(CINC) -o $@
215
216.c.o:
217        $(CC) -c $< $(CINC) -o $@
218
219clean :
220        rm -f $(BASE)/*.o $(ATROUSDIR)/*.o $(CUBESDIR)/*.o $(FITSIODIR)/*.o $(DETECTIONDIR)/*.o $(UTILDIR)/*.o $(PIXELMAPDIR)/*.o
221
222cleanest: clean
223        rm -rf Makefile config.log config.status src/config.h $(EXEC)
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